MC11g1422 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC11g1422
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	NADH dehydrogenase subunit 7
Location	MC11: 18802447 .. 18802554 (+)
RNA-Seq Expression	MC11g1422
Synteny	MC11g1422

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTTCCAAGGTTTTTTCGTACCGGCTTCTTCTACCTTTACTGCAATGGAAGCATCTAAAGGTGAATTTGATGTCTTTCTGGTTAGTAATAGAAGTAATCGTCCCTAC

mRNA sequence

TTTTTCCAAGGTTTTTTCGTACCGGCTTCTTCTACCTTTACTGCAATGGAAGCATCTAAAGGTGAATTTGATGTCTTTCTGGTTAGTAATAGAAGTAATCGTCCCTAC

Coding sequence (CDS)

TTTTTCCAAGGTTTTTTCGTACCGGCTTCTTCTACCTTTACTGCAATGGAAGCATCTAAAGGTGAATTTGATGTCTTTCTGGTTAGTAATAGAAGTAATCGTCCCTAC

Protein sequence

FFQGFFVPASSTFTAMEASKGEFDVFLVSNRSNRPY

Homology

[Close]

BLAST of MC11g1422 vs. ExPASy Swiss-Prot
Match: P93306 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 2 OS=Arabidopsis thaliana OX=3702 GN=NAD7 PE=1 SV=2)

HSP 1 Score: 57.4 bits (137), Expect = 3.9e-08
Identity = 27/36 (75.00%), Postives = 31/36 (86.11%), Query Frame = 0


Query: 1   FFQGFFVPASSTFTAMEASKGEFDVFLVSNRSNRPY 37
           + +GF VPASST+TA+EA KGEF VFLVSN SNRPY
Sbjct: 316 YTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPY 351

[Close]

BLAST of MC11g1422 vs. ExPASy Swiss-Prot
Match: Q36450 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 2 OS=Nicotiana sylvestris OX=4096 GN=NAD7 PE=2 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 1.5e-07
Identity = 26/36 (72.22%), Postives = 30/36 (83.33%), Query Frame = 0


Query: 1   FFQGFFVPASSTFTAMEASKGEFDVFLVSNRSNRPY 37
           + +GF VPA ST+TA+EA KGEF VFLVSN SNRPY
Sbjct: 316 YTEGFSVPAPSTYTAVEAPKGEFGVFLVSNGSNRPY 351

[Close]

BLAST of MC11g1422 vs. ExPASy Swiss-Prot
Match: Q9TC96 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 2 OS=Nephroselmis olivacea OX=31312 GN=NAD7 PE=3 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 6.2e-06
Identity = 22/36 (61.11%), Postives = 29/36 (80.56%), Query Frame = 0


Query: 1   FFQGFFVPASSTFTAMEASKGEFDVFLVSNRSNRPY 37
           F +G+ VP S T+T++EA KGEF V+LVSN +NRPY
Sbjct: 320 FTEGYTVPNSETYTSVEAPKGEFGVYLVSNGTNRPY 355

[Close]

BLAST of MC11g1422 vs. ExPASy Swiss-Prot
Match: A5FX11 (NADH-quinone oxidoreductase subunit D OS=Acidiphilium cryptum (strain JF-5) OX=349163 GN=nuoD PE=3 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 8.2e-06
Identity = 21/36 (58.33%), Postives = 30/36 (83.33%), Query Frame = 0


Query: 1   FFQGFFVPASSTFTAMEASKGEFDVFLVSNRSNRPY 37
           + +G+ VPA +T+TA+EA KGEF V+LV++ SNRPY
Sbjct: 328 YTEGYHVPAGTTYTAVEAPKGEFGVYLVADGSNRPY 363

[Close]

BLAST of MC11g1422 vs. ExPASy Swiss-Prot
Match: Q37720 (NADH-ubiquinone oxidoreductase 49 kDa subunit OS=Pylaiella littoralis OX=2885 GN=NAD7 PE=3 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 1.8e-05
Identity = 22/36 (61.11%), Postives = 27/36 (75.00%), Query Frame = 0


Query: 1   FFQGFFVPASSTFTAMEASKGEFDVFLVSNRSNRPY 37
           + +G FVPA  T+TA EA KGEF V+LVS  S+RPY
Sbjct: 320 YTEGVFVPAGETYTATEAPKGEFGVYLVSKGSSRPY 355

[Close]

BLAST of MC11g1422 vs. NCBI nr
Match: CBI33445.3 (unnamed protein product, partial [Vitis vinifera])

HSP 1 Score: 58.2 bits (139), Expect = 3.10e-09
Identity = 27/34 (79.41%), Postives = 30/34 (88.24%), Query Frame = 0


Query: 3  QGFFVPASSTFTAMEASKGEFDVFLVSNRSNRPY 36
          +GFFVPA ST+TA+EA KGEF VFLVSN SNRPY
Sbjct: 54 EGFFVPAPSTYTAVEAPKGEFGVFLVSNGSNRPY 87

[Close]

BLAST of MC11g1422 vs. NCBI nr
Match: KAB5511304.1 (hypothetical protein DKX38_030099 [Salix brachista])

HSP 1 Score: 57.0 bits (136), Expect = 4.08e-09
Identity = 27/34 (79.41%), Postives = 30/34 (88.24%), Query Frame = 0


Query: 3  QGFFVPASSTFTAMEASKGEFDVFLVSNRSNRPY 36
          +GF VPASST+TA+EA KGEF VFLVSN SNRPY
Sbjct: 20 EGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPY 53

[Close]

BLAST of MC11g1422 vs. NCBI nr
Match: PIN22208.1 (NADH dehydrogenase [Handroanthus impetiginosus])

HSP 1 Score: 57.0 bits (136), Expect = 4.18e-09
Identity = 27/34 (79.41%), Postives = 30/34 (88.24%), Query Frame = 0


Query: 3  QGFFVPASSTFTAMEASKGEFDVFLVSNRSNRPY 36
          +GF VPASST+TA+EA KGEF VFLVSN SNRPY
Sbjct: 20 EGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPY 53

[Close]

BLAST of MC11g1422 vs. NCBI nr
Match: CDY45550.1 (BnaCnng13090D [Brassica napus])

HSP 1 Score: 57.0 bits (136), Expect = 4.18e-09
Identity = 27/34 (79.41%), Postives = 30/34 (88.24%), Query Frame = 0


Query: 3  QGFFVPASSTFTAMEASKGEFDVFLVSNRSNRPY 36
          +GF VPASST+TA+EA KGEF VFLVSN SNRPY
Sbjct: 20 EGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPY 53

[Close]

BLAST of MC11g1422 vs. NCBI nr
Match: EEF27243.1 (NADH-ubiquinone oxidoreductase fe-s protein, putative [Ricinus communis] >QGW48465.1 hypothetical protein [Raphanus sativus] >QGW48547.1 hypothetical protein [Raphanus sativus])

HSP 1 Score: 57.0 bits (136), Expect = 4.18e-09
Identity = 27/34 (79.41%), Postives = 30/34 (88.24%), Query Frame = 0


Query: 3  QGFFVPASSTFTAMEASKGEFDVFLVSNRSNRPY 36
          +GF VPASST+TA+EA KGEF VFLVSN SNRPY
Sbjct: 20 EGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPY 53

[Close]

BLAST of MC11g1422 vs. ExPASy TrEMBL
Match: A0A1J3EYN1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 2 (Fragment) OS=Noccaea caerulescens OX=107243 GN=LC_TR13731_c1_g1_i1_g.47718 PE=3 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 1.32e-09
Identity = 27/34 (79.41%), Postives = 30/34 (88.24%), Query Frame = 0


Query: 3  QGFFVPASSTFTAMEASKGEFDVFLVSNRSNRPY 36
          +GF VPASST+TA+EA KGEF VFLVSN SNRPY
Sbjct: 17 EGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPY 50

[Close]

BLAST of MC11g1422 vs. ExPASy TrEMBL
Match: D7TSH3 (Complex1_49kDa domain-containing protein OS=Vitis vinifera OX=29760 GN=VIT_00s0332g00140 PE=3 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.50e-09
Identity = 27/34 (79.41%), Postives = 30/34 (88.24%), Query Frame = 0


Query: 3  QGFFVPASSTFTAMEASKGEFDVFLVSNRSNRPY 36
          +GFFVPA ST+TA+EA KGEF VFLVSN SNRPY
Sbjct: 54 EGFFVPAPSTYTAVEAPKGEFGVFLVSNGSNRPY 87

[Close]

BLAST of MC11g1422 vs. ExPASy TrEMBL
Match: A0A5N5J034 (Complex1_49kDa domain-containing protein OS=Salix brachista OX=2182728 GN=DKX38_030099 PE=3 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 1.98e-09
Identity = 27/34 (79.41%), Postives = 30/34 (88.24%), Query Frame = 0


Query: 3  QGFFVPASSTFTAMEASKGEFDVFLVSNRSNRPY 36
          +GF VPASST+TA+EA KGEF VFLVSN SNRPY
Sbjct: 20 EGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPY 53

[Close]

BLAST of MC11g1422 vs. ExPASy TrEMBL
Match: A0A251UZT8 (Putative niFe hydrogenase-like protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr04g0109061 PE=3 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 2.02e-09
Identity = 27/34 (79.41%), Postives = 30/34 (88.24%), Query Frame = 0


Query: 3  QGFFVPASSTFTAMEASKGEFDVFLVSNRSNRPY 36
          +GF VPASST+TA+EA KGEF VFLVSN SNRPY
Sbjct: 20 EGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPY 53

[Close]

BLAST of MC11g1422 vs. ExPASy TrEMBL
Match: A0A6J5THG3 (Complex1_49kDa domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS3484 PE=3 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 2.02e-09
Identity = 27/34 (79.41%), Postives = 30/34 (88.24%), Query Frame = 0


Query: 3  QGFFVPASSTFTAMEASKGEFDVFLVSNRSNRPY 36
          +GF VPASST+TA+EA KGEF VFLVSN SNRPY
Sbjct: 20 EGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPY 53

[Close]

BLAST of MC11g1422 vs. TAIR 10
Match: ATMG00510.1 (NADH dehydrogenase subunit 7 )

HSP 1 Score: 57.4 bits (137), Expect = 2.8e-09
Identity = 27/36 (75.00%), Postives = 31/36 (86.11%), Query Frame = 0


Query: 1   FFQGFFVPASSTFTAMEASKGEFDVFLVSNRSNRPY 37
           + +GF VPASST+TA+EA KGEF VFLVSN SNRPY
Sbjct: 316 YTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPY 351

The following BLAST results are available for this feature:

BLAST of MC11g1422 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P93306	3.9e-08	75.00	NADH dehydrogenase [ubiquinone] iron-sulfur protein 2 OS=Arabidopsis thaliana OX...	[more]
Q36450	1.5e-07	72.22	NADH dehydrogenase [ubiquinone] iron-sulfur protein 2 OS=Nicotiana sylvestris OX...	[more]
Q9TC96	6.2e-06	61.11	NADH dehydrogenase [ubiquinone] iron-sulfur protein 2 OS=Nephroselmis olivacea O...	[more]
A5FX11	8.2e-06	58.33	NADH-quinone oxidoreductase subunit D OS=Acidiphilium cryptum (strain JF-5) OX=3...	[more]
Q37720	1.8e-05	61.11	NADH-ubiquinone oxidoreductase 49 kDa subunit OS=Pylaiella littoralis OX=2885 GN...	[more]

BLAST of MC11g1422 vs. NCBI nr


Match Name	E-value	Identity	Description
CBI33445.3	3.10e-09	79.41	unnamed protein product, partial [Vitis vinifera]	[more]
KAB5511304.1	4.08e-09	79.41	hypothetical protein DKX38_030099 [Salix brachista]	[more]
PIN22208.1	4.18e-09	79.41	NADH dehydrogenase [Handroanthus impetiginosus]	[more]
CDY45550.1	4.18e-09	79.41	BnaCnng13090D [Brassica napus]	[more]
EEF27243.1	4.18e-09	79.41	NADH-ubiquinone oxidoreductase fe-s protein, putative [Ricinus communis] >QGW484...	[more]

BLAST of MC11g1422 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1J3EYN1	1.32e-09	79.41	NADH dehydrogenase [ubiquinone] iron-sulfur protein 2 (Fragment) OS=Noccaea caer...	[more]
D7TSH3	1.50e-09	79.41	Complex1_49kDa domain-containing protein OS=Vitis vinifera OX=29760 GN=VIT_00s03...	[more]
A0A5N5J034	1.98e-09	79.41	Complex1_49kDa domain-containing protein OS=Salix brachista OX=2182728 GN=DKX38_...	[more]
A0A251UZT8	2.02e-09	79.41	Putative niFe hydrogenase-like protein OS=Helianthus annuus OX=4232 GN=HannXRQ_C...	[more]
A0A6J5THG3	2.02e-09	79.41	Complex1_49kDa domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_...	[more]

BLAST of MC11g1422 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00510.1	2.8e-09	75.00	NADH dehydrogenase subunit 7	[more]

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC11g1422.1	MC11g1422.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006120	mitochondrial electron transport, NADH to ubiquinone
cellular_component	GO:0005747	mitochondrial respiratory chain complex I
molecular_function	GO:0051287	NAD binding
molecular_function	GO:0008137	NADH dehydrogenase (ubiquinone) activity
molecular_function	GO:0048038	quinone binding