MC11g1375 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC11g1375
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC11: 17911031 .. 17911138 (-)
RNA-Seq ExpressionMC11g1375
SyntenyMC11g1375
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AACAAGTCATTCCCTTACTTTGATGACTTTGCCACTATATTTGGGAAGGATTGGGCCACAGGTGCATGCGCGGAGACTCCATTTGACATGGCTTCAGCAGTAAACATG

mRNA sequence

AACAAGTCATTCCCTTACTTTGATGACTTTGCCACTATATTTGGGAAGGATTGGGCCACAGGTGCATGCGCGGAGACTCCATTTGACATGGCTTCAGCAGTAAACATG

Coding sequence (CDS)

AACAAGTCATTCCCTTACTTTGATGACTTTGCCACTATATTTGGGAAGGATTGGGCCACAGGTGCATGCGCGGAGACTCCATTTGACATGGCTTCAGCAGTAAACATG

Protein sequence

NKSFPYFDDFATIFGKDWATGACAETPFDMASAVNM
Homology
[Close]
BLAST of MC11g1375 vs. NCBI nr
Match: XP_038899283.1 (uncharacterized protein LOC120086622 [Benincasa hispida] >XP_038899284.1 uncharacterized protein LOC120086622 [Benincasa hispida] >XP_038899285.1 uncharacterized protein LOC120086622 [Benincasa hispida] >XP_038899286.1 uncharacterized protein LOC120086622 [Benincasa hispida])

HSP 1 Score: 56.2 bits (134), Expect = 6.43e-08
Identity = 25/34 (73.53%), Postives = 27/34 (79.41%), Query Frame = 0 

Query: 1  NKSFPYFDDFATIFGKDWATGACAETPFDMASAV 34
          NKSF YFDD A +FGKDWATG  AE P DMAS+V
Sbjct: 47 NKSFSYFDDLAYVFGKDWATGEGAEIPGDMASSV 80

[Close]
BLAST of MC11g1375 vs. NCBI nr
Match: XP_038886815.1 (uncharacterized protein LOC120077046 [Benincasa hispida])

HSP 1 Score: 48.1 bits (113), Expect = 3.59e-05
Identity = 22/36 (61.11%), Postives = 25/36 (69.44%), Query Frame = 0 

Query: 1   NKSFPYFDDFATIFGKDWATGACAETPFDMASAVNM 36
           NKSFPY D+ A IFGKD A G  AE P DMA  ++M
Sbjct: 76  NKSFPYLDEMAMIFGKDRANGLRAEGPDDMAEKIDM 111

[Close]
BLAST of MC11g1375 vs. NCBI nr
Match: XP_028111955.1 (uncharacterized protein LOC114310202 [Camellia sinensis])

HSP 1 Score: 48.9 bits (115), Expect = 4.18e-05
Identity = 22/35 (62.86%), Postives = 24/35 (68.57%), Query Frame = 0 

Query: 1   NKSFPYFDDFATIFGKDWATGACAETPFDMASAVN 35
           NKSFPYFD +  IFGKD ATG  AE P D   A+N
Sbjct: 131 NKSFPYFDSWIHIFGKDRATGEFAEGPVDAVDAIN 165

[Close]
BLAST of MC11g1375 vs. NCBI nr
Match: XP_017241282.1 (PREDICTED: uncharacterized protein At2g29880-like [Daucus carota subsp. sativus] >KZN02614.1 hypothetical protein DCAR_011368 [Daucus carota subsp. sativus] >KZN02615.1 hypothetical protein DCAR_011369 [Daucus carota subsp. sativus])

HSP 1 Score: 47.8 bits (112), Expect = 9.44e-05
Identity = 18/34 (52.94%), Postives = 24/34 (70.59%), Query Frame = 0 

Query: 1  NKSFPYFDDFATIFGKDWATGACAETPFDMASAV 34
          NKSFPY+D+ + +FGKD A G C E+P D A  +
Sbjct: 63 NKSFPYYDELSQVFGKDRANGECVESPADAAEEI 96

[Close]
BLAST of MC11g1375 vs. NCBI nr
Match: XP_042454902.1 (uncharacterized protein LOC122038973 [Zingiber officinale])

HSP 1 Score: 47.8 bits (112), Expect = 1.08e-04
Identity = 20/36 (55.56%), Postives = 24/36 (66.67%), Query Frame = 0 

Query: 1   NKSFPYFDDFATIFGKDWATGACAETPFDMASAVNM 36
           NK FPY DD   ++GKD ATGA AETP D    +N+
Sbjct: 171 NKEFPYHDDLMFVWGKDHATGANAETPVDAVEEINL 206

[Close]
BLAST of MC11g1375 vs. ExPASy TrEMBL
Match: A0A2N9FY13 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS20020 PE=4 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 8.27e-06
Identity = 22/35 (62.86%), Postives = 25/35 (71.43%), Query Frame = 0 

Query: 1  NKSFPYFDDFATIFGKDWATGACAETPFDMASAVN 35
          NK FP++DD A +FGKD ATG  AE P DMA  VN
Sbjct: 26 NKPFPHYDDLAHVFGKDRATGFSAEGPSDMAQTVN 60

[Close]
BLAST of MC11g1375 vs. ExPASy TrEMBL
Match: A0A2N9JAE0 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS61392 PE=4 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 9.44e-06
Identity = 22/35 (62.86%), Postives = 25/35 (71.43%), Query Frame = 0 

Query: 1  NKSFPYFDDFATIFGKDWATGACAETPFDMASAVN 35
          NKSFP++DD A +FGKD A G  AE P DMA  VN
Sbjct: 51 NKSFPHYDDLAHVFGKDRAIGFSAEGPSDMAQTVN 85

[Close]
BLAST of MC11g1375 vs. ExPASy TrEMBL
Match: A0A2N9FKA2 (Myb_DNA-bind_3 domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS15417 PE=4 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 1.08e-05
Identity = 22/35 (62.86%), Postives = 25/35 (71.43%), Query Frame = 0 

Query: 1   NKSFPYFDDFATIFGKDWATGACAETPFDMASAVN 35
           NK FP++DD A +FGKD ATG  AE P DMA  VN
Sbjct: 134 NKPFPHYDDLAHVFGKDRATGFSAEGPSDMAQTVN 168

[Close]
BLAST of MC11g1375 vs. ExPASy TrEMBL
Match: A0A2N9EG32 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS1585 PE=4 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 1.17e-05
Identity = 21/35 (60.00%), Postives = 26/35 (74.29%), Query Frame = 0 

Query: 1  NKSFPYFDDFATIFGKDWATGACAETPFDMASAVN 35
          NKSFP++DD A +F KD ATG+ AE P DMA  V+
Sbjct: 25 NKSFPHYDDLAHVFEKDRATGSSAEGPSDMAQTVD 59

[Close]
BLAST of MC11g1375 vs. ExPASy TrEMBL
Match: A0A2N9GUQ9 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS33998 PE=4 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 1.37e-05
Identity = 22/35 (62.86%), Postives = 25/35 (71.43%), Query Frame = 0 

Query: 1   NKSFPYFDDFATIFGKDWATGACAETPFDMASAVN 35
           NKSFP++DD A +FGKD A G  AE P DMA  VN
Sbjct: 66  NKSFPHYDDLAHVFGKDRAIGFSAEGPSDMAQTVN 100

The following BLAST results are available for this feature:
BLAST of MC11g1375 vs.
Match NameE-valueIdentityDescription
BLAST of MC11g1375 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038899283.16.43e-0873.53uncharacterized protein LOC120086622 [Benincasa hispida] >XP_038899284.1 unchara... [more]
XP_038886815.13.59e-0561.11uncharacterized protein LOC120077046 [Benincasa hispida][more]
XP_028111955.14.18e-0562.86uncharacterized protein LOC114310202 [Camellia sinensis][more]
XP_017241282.19.44e-0552.94PREDICTED: uncharacterized protein At2g29880-like [Daucus carota subsp. sativus]... [more]
XP_042454902.11.08e-0455.56uncharacterized protein LOC122038973 [Zingiber officinale][more]
BLAST of MC11g1375 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A2N9FY138.27e-0662.86Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS20020 PE=4 SV=1[more]
A0A2N9JAE09.44e-0662.86Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS61392 PE=4 SV=1[more]
A0A2N9FKA21.08e-0562.86Myb_DNA-bind_3 domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCU... [more]
A0A2N9EG321.17e-0560.00Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS1585 PE=4 SV=1[more]
A0A2N9GUQ91.37e-0562.86Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS33998 PE=4 SV=1[more]
BLAST of MC11g1375 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC11g1375.1MC11g1375.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane