MC11g1362 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC11g1362
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	DNA primase
Location	MC11: 17316702 .. 17317322 (-)
RNA-Seq Expression	MC11g1362
Synteny	MC11g1362

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTACTGAAGCGGTCGAGAATGGAGGAGGCGATATGGAAATTGATGGATTCGAACAGAAGCCTGAGAAAGTTGTGCCCGATGGGTTCGATGTTAACTATCTCAAAATTTACTACGGTGAAACCATTTATATACCCACTTTTGGTTTTGAAGAAATTTTTTGTATTTTGATCTGGCCTTCTTTCCGGTTGCGATATGAAATGTTCCATGGATTTTAGTTTGATTTTGTCCGTTTTATGTTTTCTGCTCCTGAAAGATGTGAAATATAATTGTTGCAGGAAAGCTTTTCCCGTATACTGATTTCTTCAAATGGATGTCTTATGGAAATGGTATGCCGTTGATTCTTGGAAACAGAAGCAAAAAATTATCCACCCAGAGGAAGCTAACTAATATTAAATATGTAACTGCTCCTGTTTTTCCTTGTAGATGGCAAGCATCCAGGCAGTGACCAATCATATTTTGGCCGGAGAGAGTTTTCATTCACATTGGAGAATGATATATATCTACGATACCAATCTTTCAATAACTTATCCGAAATGGAGAATTCGATCAAGGAAAAGTGTCCGTTTAAAATTGATATTGGGCCTGTATACAACGTGGATGTAAGTACAATTCTTCCT

mRNA sequence

ATGATTACTGAAGCGGTCGAGAATGGAGGAGGCGATATGGAAATTGATGGATTCGAACAGAAGCCTGAGAAAGTTGTGCCCGATGGGTTCGATGTTAACTATCTCAAAATTTACTACGGAAAGCTTTTCCCGTATACTGATTTCTTCAAATGGATGTCTTATGGAAATGATGGCAAGCATCCAGGCAGTGACCAATCATATTTTGGCCGGAGAGAGTTTTCATTCACATTGGAGAATGATATATATCTACGATACCAATCTTTCAATAACTTATCCGAAATGGAGAATTCGATCAAGGAAAAGTGTCCGTTTAAAATTGATATTGGGCCTGTATACAACGTGGATGTAAGTACAATTCTTCCT

Coding sequence (CDS)

ATGATTACTGAAGCGGTCGAGAATGGAGGAGGCGATATGGAAATTGATGGATTCGAACAGAAGCCTGAGAAAGTTGTGCCCGATGGGTTCGATGTTAACTATCTCAAAATTTACTACGGAAAGCTTTTCCCGTATACTGATTTCTTCAAATGGATGTCTTATGGAAATGATGGCAAGCATCCAGGCAGTGACCAATCATATTTTGGCCGGAGAGAGTTTTCATTCACATTGGAGAATGATATATATCTACGATACCAATCTTTCAATAACTTATCCGAAATGGAGAATTCGATCAAGGAAAAGTGTCCGTTTAAAATTGATATTGGGCCTGTATACAACGTGGATGTAAGTACAATTCTTCCT

Protein sequence

MITEAVENGGGDMEIDGFEQKPEKVVPDGFDVNYLKIYYGKLFPYTDFFKWMSYGNDGKHPGSDQSYFGRREFSFTLENDIYLRYQSFNNLSEMENSIKEKCPFKIDIGPVYNVDVSTILP

Homology

[Close]

BLAST of MC11g1362 vs. ExPASy Swiss-Prot
Match: P20664 (DNA primase small subunit OS=Mus musculus OX=10090 GN=Prim1 PE=1 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 7.4e-19
Identity = 42/79 (53.16%), Postives = 60/79 (75.95%), Query Frame = 0


Query: 35  LKIYYGKLFPYTDFFKWMSYGNDGKHPGSDQSYFGRREFSFTLENDIYLRYQSFNNLSEM 94
           LK+YY +LFPY  +++W++YG      G  ++YF  REFSFTL++DIY+RYQSFNN SE+
Sbjct: 13  LKLYYRRLFPYAQYYRWLNYG------GVTKNYFQHREFSFTLKDDIYIRYQSFNNQSEL 72

Query: 95  ENSIKEKCPFKIDIGPVYN 114
           E  +++  P+KIDIG VY+
Sbjct: 73  EKEMQKMNPYKIDIGAVYS 85

[Close]

BLAST of MC11g1362 vs. ExPASy Swiss-Prot
Match: P49642 (DNA primase small subunit OS=Homo sapiens OX=9606 GN=PRIM1 PE=1 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 2.2e-18
Identity = 41/79 (51.90%), Postives = 61/79 (77.22%), Query Frame = 0


Query: 35  LKIYYGKLFPYTDFFKWMSYGNDGKHPGSDQSYFGRREFSFTLENDIYLRYQSFNNLSEM 94
           LK+YY +LFPY+ +++W++YG      G  ++YF  REFSFTL++DIY+RYQSFNN S++
Sbjct: 13  LKLYYRRLFPYSQYYRWLNYG------GVIKNYFQHREFSFTLKDDIYIRYQSFNNQSDL 72

Query: 95  ENSIKEKCPFKIDIGPVYN 114
           E  +++  P+KIDIG VY+
Sbjct: 73  EKEMQKMNPYKIDIGAVYS 85

[Close]

BLAST of MC11g1362 vs. ExPASy Swiss-Prot
Match: Q24317 (DNA primase small subunit OS=Drosophila melanogaster OX=7227 GN=Prim1 PE=1 SV=2)

HSP 1 Score: 78.2 bits (191), Expect = 7.2e-14
Identity = 36/77 (46.75%), Postives = 52/77 (67.53%), Query Frame = 0


Query: 35  LKIYYGKLFPYTDFFKWMSYGNDGKHPGSDQSYFGRREFSFTLENDIYLRYQSFNNLSEM 94
           L +YY +LFP+  F++W+SYG+      S+ + F  RE SFTL++DIY+RY  F+  +E+
Sbjct: 32  LPVYYRRLFPHLPFYRWLSYGS------SEDAIFSNREISFTLQDDIYIRYLCFDTQAEL 91

Query: 95  ENSIKEKCPFKIDIGPV 112
           E  I  + P KIDIGPV
Sbjct: 92  EKEICSRNPIKIDIGPV 102

[Close]

BLAST of MC11g1362 vs. ExPASy Swiss-Prot
Match: P34471 (DNA primase small subunit OS=Caenorhabditis elegans OX=6239 GN=pri-1 PE=3 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 2.2e-10
Identity = 32/79 (40.51%), Postives = 46/79 (58.23%), Query Frame = 0


Query: 35  LKIYYGKLFPYTDFFKWMSYGNDGKHPGSDQSYFGRREFSFTLENDIYLRYQSFNNLSEM 94
           L IYY   FP   F KW+ YG       ++  YF RREF+F L +D+++RY+S+N+    
Sbjct: 12  LPIYYKNFFPVKPFTKWLRYGQ------NNGDYFNRREFAFILADDVHIRYRSYNDEHAF 71

Query: 95  ENSIKEKCPFKIDIGPVYN 114
             ++    P K+DIG VYN
Sbjct: 72  FKALSSTNPEKLDIGAVYN 84

[Close]

BLAST of MC11g1362 vs. ExPASy Swiss-Prot
Match: O14215 (DNA primase small subunit OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=pri1 PE=1 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 3.7e-10
Identity = 32/82 (39.02%), Postives = 47/82 (57.32%), Query Frame = 0


Query: 38  YYGKLFPYTDFFKWMSYG----NDGKHPGSDQSYFGRREFSFTLENDIYLRYQSFNNLSE 97
           YY  LFP+   F+W+++G    ND          F  REF+FTL ND Y+RY SF+N  E
Sbjct: 38  YYRHLFPWKYLFQWLNHGPVVTND----------FAHREFAFTLPNDAYIRYLSFSNWEE 97

Query: 98  MENSIKEKCPFKIDIGPVYNVD 116
           ++      CP + ++GPVY+ +
Sbjct: 98  LKKEALNLCPSRFEVGPVYSAN 109

[Close]

BLAST of MC11g1362 vs. NCBI nr
Match: XP_022141779.1 (DNA primase small subunit-like [Momordica charantia])

HSP 1 Score: 254 bits (650), Expect = 2.77e-85
Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0


Query: 1   MITEAVENGGGDMEIDGFEQKPEKVVPDGFDVNYLKIYYGKLFPYTDFFKWMSYGNDGKH 60
           MITEAVENGGGDMEIDGFEQKPEKVVPDGFDVNYLKIYYGKLFPYTDFFKWMSYGNDGKH
Sbjct: 1   MITEAVENGGGDMEIDGFEQKPEKVVPDGFDVNYLKIYYGKLFPYTDFFKWMSYGNDGKH 60

Query: 61  PGSDQSYFGRREFSFTLENDIYLRYQSFNNLSEMENSIKEKCPFKIDIGPVYNVDVSTIL 120
           PGSDQSYFGRREFSFTLENDIYLRYQSFNNLSEMENSIKEKCPFKIDIGPVYNVDVSTIL
Sbjct: 61  PGSDQSYFGRREFSFTLENDIYLRYQSFNNLSEMENSIKEKCPFKIDIGPVYNVDVSTIL 120

[Close]

BLAST of MC11g1362 vs. NCBI nr
Match: XP_022141835.1 (DNA primase small subunit-like [Momordica charantia] >XP_022141836.1 DNA primase small subunit-like [Momordica charantia] >XP_022141837.1 DNA primase small subunit-like [Momordica charantia] >XP_022141838.1 DNA primase small subunit-like [Momordica charantia])

HSP 1 Score: 243 bits (619), Expect = 3.03e-76
Identity = 114/117 (97.44%), Postives = 117/117 (100.00%), Query Frame = 0


Query: 1   MITEAVENGGGDMEIDGFEQKPEKVVPDGFDVNYLKIYYGKLFPYTDFFKWMSYGNDGKH 60
           MITEAVENGGGDMEIDGFEQKPEKVVPDGFDVNYLKIYYGKLFPYTDFFKWMSYGNDGKH
Sbjct: 1   MITEAVENGGGDMEIDGFEQKPEKVVPDGFDVNYLKIYYGKLFPYTDFFKWMSYGNDGKH 60

Query: 61  PGSDQSYFGRREFSFTLENDIYLRYQSFNNLSEMENSIKEKCPFKIDIGPVYNVDVS 117
           PGSDQSYFGRREFSFTLENDIYLRYQSFNNLSEMENSIKEKCPFKIDIGPVY+VD++
Sbjct: 61  PGSDQSYFGRREFSFTLENDIYLRYQSFNNLSEMENSIKEKCPFKIDIGPVYSVDLA 117

[Close]

BLAST of MC11g1362 vs. NCBI nr
Match: XP_008465512.1 (PREDICTED: DNA primase small subunit-like [Cucumis melo])

HSP 1 Score: 223 bits (567), Expect = 1.07e-72
Identity = 106/121 (87.60%), Postives = 111/121 (91.74%), Query Frame = 0


Query: 1   MITEAVENGGGDMEIDGFEQKPEKVVPDGFDVNYLKIYYGKLFPYTDFFKWMSYGNDGKH 60
           M+T AVENGG DM IDG EQKP+K V DGFD NYLKIYYGKLFPY DFFKWMSYGNDGKH
Sbjct: 1   MVTAAVENGGSDMVIDGNEQKPKKSVSDGFDANYLKIYYGKLFPYADFFKWMSYGNDGKH 60

Query: 61  PGSDQSYFGRREFSFTLENDIYLRYQSFNNLSEMENSIKEKCPFKIDIGPVYNVDVSTIL 120
           PGSDQSYFGRREFSFTL+NDIYLR+QSFNNLSEME SIKEKCPFKIDIGPVY+VDVS IL
Sbjct: 61  PGSDQSYFGRREFSFTLDNDIYLRFQSFNNLSEMEISIKEKCPFKIDIGPVYSVDVSKIL 120

[Close]

BLAST of MC11g1362 vs. NCBI nr
Match: XP_004141619.1 (DNA primase small subunit [Cucumis sativus] >XP_031742330.1 DNA primase small subunit [Cucumis sativus] >KGN52619.1 hypothetical protein Csa_007851 [Cucumis sativus])

HSP 1 Score: 213 bits (542), Expect = 7.65e-65
Identity = 100/115 (86.96%), Postives = 105/115 (91.30%), Query Frame = 0


Query: 1   MITEAVENGGGDMEIDGFEQKPEKVVPDGFDVNYLKIYYGKLFPYTDFFKWMSYGNDGKH 60
           M+T AVENGG DM IDG EQKP+  V DGFD NYLKIYYGKLFPY DFFKWMSYGNDGKH
Sbjct: 1   MVTAAVENGGSDMVIDGNEQKPKNTVSDGFDANYLKIYYGKLFPYADFFKWMSYGNDGKH 60

Query: 61  PGSDQSYFGRREFSFTLENDIYLRYQSFNNLSEMENSIKEKCPFKIDIGPVYNVD 115
           PGSDQSYFGRREFSFTL+NDIYLR+QSFNNLSEME SIKEKCPFKIDIGPVY+VD
Sbjct: 61  PGSDQSYFGRREFSFTLDNDIYLRFQSFNNLSEMEISIKEKCPFKIDIGPVYSVD 115

[Close]

BLAST of MC11g1362 vs. NCBI nr
Match: KAA0039338.1 (DNA primase, small subunit [Cucumis melo var. makuwa] >TYK00521.1 DNA primase, small subunit [Cucumis melo var. makuwa])

HSP 1 Score: 213 bits (541), Expect = 3.64e-64
Identity = 100/115 (86.96%), Postives = 106/115 (92.17%), Query Frame = 0


Query: 1   MITEAVENGGGDMEIDGFEQKPEKVVPDGFDVNYLKIYYGKLFPYTDFFKWMSYGNDGKH 60
           M+T AVENGG DM IDG EQKP+K V DGFD NYLKIYYGKLFPY DFFKWMSYGNDGKH
Sbjct: 16  MVTAAVENGGSDMVIDGNEQKPKKSVSDGFDANYLKIYYGKLFPYADFFKWMSYGNDGKH 75

Query: 61  PGSDQSYFGRREFSFTLENDIYLRYQSFNNLSEMENSIKEKCPFKIDIGPVYNVD 115
           PGSDQSYFGRREFSFTL+NDIYLR+QSFNNLSEME SIKE+CPFKIDIGPVY+VD
Sbjct: 76  PGSDQSYFGRREFSFTLDNDIYLRFQSFNNLSEMEISIKEQCPFKIDIGPVYSVD 130

[Close]

BLAST of MC11g1362 vs. ExPASy TrEMBL
Match: A0A6J1CJS7 (DNA primase small subunit-like OS=Momordica charantia OX=3673 GN=LOC111012059 PE=4 SV=1)

HSP 1 Score: 254 bits (650), Expect = 1.34e-85
Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0


Query: 1   MITEAVENGGGDMEIDGFEQKPEKVVPDGFDVNYLKIYYGKLFPYTDFFKWMSYGNDGKH 60
           MITEAVENGGGDMEIDGFEQKPEKVVPDGFDVNYLKIYYGKLFPYTDFFKWMSYGNDGKH
Sbjct: 1   MITEAVENGGGDMEIDGFEQKPEKVVPDGFDVNYLKIYYGKLFPYTDFFKWMSYGNDGKH 60

Query: 61  PGSDQSYFGRREFSFTLENDIYLRYQSFNNLSEMENSIKEKCPFKIDIGPVYNVDVSTIL 120
           PGSDQSYFGRREFSFTLENDIYLRYQSFNNLSEMENSIKEKCPFKIDIGPVYNVDVSTIL
Sbjct: 61  PGSDQSYFGRREFSFTLENDIYLRYQSFNNLSEMENSIKEKCPFKIDIGPVYNVDVSTIL 120

[Close]

BLAST of MC11g1362 vs. ExPASy TrEMBL
Match: A0A6J1CKZ3 (DNA primase OS=Momordica charantia OX=3673 GN=LOC111012104 PE=3 SV=1)

HSP 1 Score: 243 bits (619), Expect = 1.47e-76
Identity = 114/117 (97.44%), Postives = 117/117 (100.00%), Query Frame = 0


Query: 1   MITEAVENGGGDMEIDGFEQKPEKVVPDGFDVNYLKIYYGKLFPYTDFFKWMSYGNDGKH 60
           MITEAVENGGGDMEIDGFEQKPEKVVPDGFDVNYLKIYYGKLFPYTDFFKWMSYGNDGKH
Sbjct: 1   MITEAVENGGGDMEIDGFEQKPEKVVPDGFDVNYLKIYYGKLFPYTDFFKWMSYGNDGKH 60

Query: 61  PGSDQSYFGRREFSFTLENDIYLRYQSFNNLSEMENSIKEKCPFKIDIGPVYNVDVS 117
           PGSDQSYFGRREFSFTLENDIYLRYQSFNNLSEMENSIKEKCPFKIDIGPVY+VD++
Sbjct: 61  PGSDQSYFGRREFSFTLENDIYLRYQSFNNLSEMENSIKEKCPFKIDIGPVYSVDLA 117

[Close]

BLAST of MC11g1362 vs. ExPASy TrEMBL
Match: A0A1S3CQI3 (DNA primase small subunit-like OS=Cucumis melo OX=3656 GN=LOC103503131 PE=4 SV=1)

HSP 1 Score: 223 bits (567), Expect = 5.16e-73
Identity = 106/121 (87.60%), Postives = 111/121 (91.74%), Query Frame = 0


Query: 1   MITEAVENGGGDMEIDGFEQKPEKVVPDGFDVNYLKIYYGKLFPYTDFFKWMSYGNDGKH 60
           M+T AVENGG DM IDG EQKP+K V DGFD NYLKIYYGKLFPY DFFKWMSYGNDGKH
Sbjct: 1   MVTAAVENGGSDMVIDGNEQKPKKSVSDGFDANYLKIYYGKLFPYADFFKWMSYGNDGKH 60

Query: 61  PGSDQSYFGRREFSFTLENDIYLRYQSFNNLSEMENSIKEKCPFKIDIGPVYNVDVSTIL 120
           PGSDQSYFGRREFSFTL+NDIYLR+QSFNNLSEME SIKEKCPFKIDIGPVY+VDVS IL
Sbjct: 61  PGSDQSYFGRREFSFTLDNDIYLRFQSFNNLSEMEISIKEKCPFKIDIGPVYSVDVSKIL 120

[Close]

BLAST of MC11g1362 vs. ExPASy TrEMBL
Match: A0A0A0KUP7 (DNA primase OS=Cucumis sativus OX=3659 GN=Csa_5G647410 PE=3 SV=1)

HSP 1 Score: 213 bits (542), Expect = 3.71e-65
Identity = 100/115 (86.96%), Postives = 105/115 (91.30%), Query Frame = 0


Query: 1   MITEAVENGGGDMEIDGFEQKPEKVVPDGFDVNYLKIYYGKLFPYTDFFKWMSYGNDGKH 60
           M+T AVENGG DM IDG EQKP+  V DGFD NYLKIYYGKLFPY DFFKWMSYGNDGKH
Sbjct: 1   MVTAAVENGGSDMVIDGNEQKPKNTVSDGFDANYLKIYYGKLFPYADFFKWMSYGNDGKH 60

Query: 61  PGSDQSYFGRREFSFTLENDIYLRYQSFNNLSEMENSIKEKCPFKIDIGPVYNVD 115
           PGSDQSYFGRREFSFTL+NDIYLR+QSFNNLSEME SIKEKCPFKIDIGPVY+VD
Sbjct: 61  PGSDQSYFGRREFSFTLDNDIYLRFQSFNNLSEMEISIKEKCPFKIDIGPVYSVD 115

[Close]

BLAST of MC11g1362 vs. ExPASy TrEMBL
Match: A0A5A7T8Y3 (DNA primase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G001310 PE=3 SV=1)

HSP 1 Score: 213 bits (541), Expect = 1.76e-64
Identity = 100/115 (86.96%), Postives = 106/115 (92.17%), Query Frame = 0


Query: 1   MITEAVENGGGDMEIDGFEQKPEKVVPDGFDVNYLKIYYGKLFPYTDFFKWMSYGNDGKH 60
           M+T AVENGG DM IDG EQKP+K V DGFD NYLKIYYGKLFPY DFFKWMSYGNDGKH
Sbjct: 16  MVTAAVENGGSDMVIDGNEQKPKKSVSDGFDANYLKIYYGKLFPYADFFKWMSYGNDGKH 75

Query: 61  PGSDQSYFGRREFSFTLENDIYLRYQSFNNLSEMENSIKEKCPFKIDIGPVYNVD 115
           PGSDQSYFGRREFSFTL+NDIYLR+QSFNNLSEME SIKE+CPFKIDIGPVY+VD
Sbjct: 76  PGSDQSYFGRREFSFTLDNDIYLRFQSFNNLSEMEISIKEQCPFKIDIGPVYSVD 130

[Close]

BLAST of MC11g1362 vs. TAIR 10
Match: AT5G41880.1 (DNA primases;DNA primases )

HSP 1 Score: 149.1 bits (375), Expect = 2.4e-36
Identity = 71/115 (61.74%), Postives = 85/115 (73.91%), Query Frame = 0


Query: 1   MITEAVENGGGDMEIDGFEQKPEKVVPDGFDVNYLKIYYGKLFPYTDFFKWMSYGNDGKH 60
           M  E  E  G DM ID     P+  + + F+V+YL+IYYG LFPYTD  KW+SYG+DGKH
Sbjct: 1   MTREETETSGEDMMID----DPKPKIENDFNVHYLRIYYGNLFPYTDIHKWLSYGHDGKH 60

Query: 61  PGSDQSYFGRREFSFTLENDIYLRYQSFNNLSEMENSIKEKCPFKIDIGPVYNVD 116
           PG D+ YFGRREFSFTLEND+YLRY+SF N S ME +IK   P+KIDIG VY+VD
Sbjct: 61  PGCDEYYFGRREFSFTLENDVYLRYKSFKNASLMEAAIKSNFPYKIDIGAVYSVD 111

The following BLAST results are available for this feature:

BLAST of MC11g1362 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P20664	7.4e-19	53.16	DNA primase small subunit OS=Mus musculus OX=10090 GN=Prim1 PE=1 SV=1	[more]
P49642	2.2e-18	51.90	DNA primase small subunit OS=Homo sapiens OX=9606 GN=PRIM1 PE=1 SV=1	[more]
Q24317	7.2e-14	46.75	DNA primase small subunit OS=Drosophila melanogaster OX=7227 GN=Prim1 PE=1 SV=2	[more]
P34471	2.2e-10	40.51	DNA primase small subunit OS=Caenorhabditis elegans OX=6239 GN=pri-1 PE=3 SV=1	[more]
O14215	3.7e-10	39.02	DNA primase small subunit OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)...	[more]

BLAST of MC11g1362 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022141779.1	2.77e-85	100.00	DNA primase small subunit-like [Momordica charantia]	[more]
XP_022141835.1	3.03e-76	97.44	DNA primase small subunit-like [Momordica charantia] >XP_022141836.1 DNA primase...	[more]
XP_008465512.1	1.07e-72	87.60	PREDICTED: DNA primase small subunit-like [Cucumis melo]	[more]
XP_004141619.1	7.65e-65	86.96	DNA primase small subunit [Cucumis sativus] >XP_031742330.1 DNA primase small su...	[more]
KAA0039338.1	3.64e-64	86.96	DNA primase, small subunit [Cucumis melo var. makuwa] >TYK00521.1 DNA primase, s...	[more]

BLAST of MC11g1362 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CJS7	1.34e-85	100.00	DNA primase small subunit-like OS=Momordica charantia OX=3673 GN=LOC111012059 PE...	[more]
A0A6J1CKZ3	1.47e-76	97.44	DNA primase OS=Momordica charantia OX=3673 GN=LOC111012104 PE=3 SV=1	[more]
A0A1S3CQI3	5.16e-73	87.60	DNA primase small subunit-like OS=Cucumis melo OX=3656 GN=LOC103503131 PE=4 SV=1	[more]
A0A0A0KUP7	3.71e-65	86.96	DNA primase OS=Cucumis sativus OX=3659 GN=Csa_5G647410 PE=3 SV=1	[more]
A0A5A7T8Y3	1.76e-64	86.96	DNA primase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G001310 P...	[more]

BLAST of MC11g1362 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G41880.1	2.4e-36	61.74	DNA primases;DNA primases	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.90.920.10	DNA primase, PRIM domain	coord: 29..119 e-value: 1.5E-27 score: 98.8
None	No IPR available	PANTHER	PTHR10536:SF0	DNA PRIMASE SMALL SUBUNIT	coord: 27..117
None	No IPR available	SUPERFAMILY	56747	Prim-pol domain	coord: 31..115
IPR014052	DNA primase, small subunit, eukaryotic/archaeal	PANTHER	PTHR10536	DNA PRIMASE SMALL SUBUNIT	coord: 27..117

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC11g1362.1	MC11g1362.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006269	DNA replication, synthesis of RNA primer
cellular_component	GO:0005658	alpha DNA polymerase:primase complex
molecular_function	GO:0003896	DNA primase activity
molecular_function	GO:0046872	metal ion binding