MC11g1341 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC11g1341
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionDeoxyuridine 5'-triphosphate nucleotidohydrolase
LocationMC11: 16739444 .. 16739614 (-)
RNA-Seq ExpressionMC11g1341
SyntenyMC11g1341
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TCGGGCTTGACTTTGAAGCATGCAATCGATGTTGGTGCAGGTACGATAGATGCTAATTACAACGGTCCCATGGGAGTGATTCTTGAGAAAATAGTGACGCCAAAGGTGCTGGAGGTCGAGGATTTGGATTCGACTGCCAGAGGCAAAGACAGCTTTGGCTCTACAAGAGTT

mRNA sequence

TCGGGCTTGACTTTGAAGCATGCAATCGATGTTGGTGCAGGTACGATAGATGCTAATTACAACGGTCCCATGGGAGTGATTCTTGAGAAAATAGTGACGCCAAAGGTGCTGGAGGTCGAGGATTTGGATTCGACTGCCAGAGGCAAAGACAGCTTTGGCTCTACAAGAGTT

Coding sequence (CDS)

TCGGGCTTGACTTTGAAGCATGCAATCGATGTTGGTGCAGGTACGATAGATGCTAATTACAACGGTCCCATGGGAGTGATTCTTGAGAAAATAGTGACGCCAAAGGTGCTGGAGGTCGAGGATTTGGATTCGACTGCCAGAGGCAAAGACAGCTTTGGCTCTACAAGAGTT

Protein sequence

SGLTLKHAIDVGAGTIDANYNGPMGVILEKIVTPKVLEVEDLDSTARGKDSFGSTRV
Homology
[Close]
BLAST of MC11g1341 vs. ExPASy Swiss-Prot
Match: Q10FF9 (Deoxyuridine 5'-triphosphate nucleotidohydrolase OS=Oryza sativa subsp. japonica OX=39947 GN=DUT PE=3 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 1.3e-13
Identity = 42/78 (53.85%), Postives = 48/78 (61.54%), Query Frame = 0 

Query: 1   SGLTLKHAIDVGAGTIDANYNGPMGVIL---------------------EKIVTPKVLEV 58
           SGL LKH+IDVGAG IDA+Y GP+GVIL                     E IVTP+V EV
Sbjct: 94  SGLALKHSIDVGAGVIDADYRGPVGVILFNHSDTDFAVKPGDRIAQMIIEVIVTPEVAEV 153

[Close]
BLAST of MC11g1341 vs. ExPASy Swiss-Prot
Match: Q9STG6 (Deoxyuridine 5'-triphosphate nucleotidohydrolase OS=Arabidopsis thaliana OX=3702 GN=DUT PE=1 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 4.9e-13
Identity = 41/78 (52.56%), Postives = 46/78 (58.97%), Query Frame = 0 

Query: 1   SGLTLKHAIDVGAGTIDANYNGPMGVIL---------------------EKIVTPKVLEV 58
           SGL  KH+IDVGAG IDA+Y GP+GVIL                     EKIVTP V+EV
Sbjct: 89  SGLAWKHSIDVGAGVIDADYRGPVGVILFNHSDADFEVKFGDRIAQLIIEKIVTPDVVEV 148

[Close]
BLAST of MC11g1341 vs. ExPASy Swiss-Prot
Match: P32518 (Deoxyuridine 5'-triphosphate nucleotidohydrolase OS=Solanum lycopersicum OX=4081 PE=2 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 7.1e-12
Identity = 38/78 (48.72%), Postives = 47/78 (60.26%), Query Frame = 0 

Query: 1   SGLTLKHAIDVGAGTIDANYNGPMGVIL---------------------EKIVTPKVLEV 58
           SGL  K++IDVGAG IDA+Y GP+GV+L                     +KIVTP+V +V
Sbjct: 92  SGLAWKYSIDVGAGVIDADYRGPVGVVLFNHSEVDFEVKVGDRIAQLIVQKIVTPEVEQV 151

[Close]
BLAST of MC11g1341 vs. ExPASy Swiss-Prot
Match: Q54BW5 (Deoxyuridine 5'-triphosphate nucleotidohydrolase, mitochondrial OS=Dictyostelium discoideum OX=44689 GN=dut PE=1 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 1.6e-08
Identity = 33/78 (42.31%), Postives = 43/78 (55.13%), Query Frame = 0 

Query: 1   SGLTLKHAIDVGAGTIDANYNGPMGVIL---------------------EKIVTPKVLEV 58
           SGL  K+ ID GAG ID++Y G +GV+L                     E+IVTP+ LEV
Sbjct: 98  SGLAWKNFIDCGAGVIDSDYRGNVGVVLFNHSDVDFKVAVGDRVAQLIFERIVTPEPLEV 157

[Close]
BLAST of MC11g1341 vs. ExPASy Swiss-Prot
Match: Q9P6Q5 (Probable deoxyuridine 5'-triphosphate nucleotidohydrolase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC644.05c PE=3 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 2.1e-08
Identity = 34/78 (43.59%), Postives = 42/78 (53.85%), Query Frame = 0 

Query: 1   SGLTLKHAIDVGAGTIDANYNGPMGV---------------------ILEKIVTPKVLEV 58
           SGL  KH+ID GAG IDA+Y G + V                     ILE+IV P V+ V
Sbjct: 63  SGLASKHSIDTGAGVIDADYRGHVRVLLFNYSDVDFPIKVGDRIAQLILERIVNPPVILV 122

[Close]
BLAST of MC11g1341 vs. NCBI nr
Match: KAG6598436.1 (hypothetical protein SDJN03_08214, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 83.6 bits (205), Expect = 2.48e-18
Identity = 46/78 (58.97%), Postives = 50/78 (64.10%), Query Frame = 0 

Query: 1   SGLTLKHAIDVGAGTIDANYNGPMGVIL---------------------EKIVTPKVLEV 57
           SGL LKHAIDVGAG IDA+Y GP+GVIL                     EKIVTP+VLEV
Sbjct: 98  SGLALKHAIDVGAGVIDADYRGPLGVILFNHSDADFEVKMGDRIAQLILEKIVTPEVLEV 157

[Close]
BLAST of MC11g1341 vs. NCBI nr
Match: XP_022144283.1 (deoxyuridine 5'-triphosphate nucleotidohydrolase [Momordica charantia])

HSP 1 Score: 84.7 bits (208), Expect = 2.49e-18
Identity = 47/78 (60.26%), Postives = 51/78 (65.38%), Query Frame = 0 

Query: 1   SGLTLKHAIDVGAGTIDANYNGPMGVIL---------------------EKIVTPKVLEV 57
           SGL LKHAIDVGAG IDA+Y GP+GVIL                     EKIVTP+VLEV
Sbjct: 148 SGLALKHAIDVGAGVIDADYRGPVGVILFNHSDVDFEVKAGDRIAQLILEKIVTPEVLEV 207

[Close]
BLAST of MC11g1341 vs. NCBI nr
Match: XP_022996788.1 (LOW QUALITY PROTEIN: deoxyuridine 5'-triphosphate nucleotidohydrolase [Cucurbita maxima])

HSP 1 Score: 83.6 bits (205), Expect = 6.43e-18
Identity = 46/78 (58.97%), Postives = 50/78 (64.10%), Query Frame = 0 

Query: 1   SGLTLKHAIDVGAGTIDANYNGPMGVIL---------------------EKIVTPKVLEV 57
           SGL LKHAIDVGAG IDA+Y GP+GVIL                     EKIVTP+VLEV
Sbjct: 144 SGLALKHAIDVGAGVIDADYRGPLGVILFNHSDADFEVKMGDRIAQLILEKIVTPEVLEV 203

[Close]
BLAST of MC11g1341 vs. NCBI nr
Match: XP_022961935.1 (LOW QUALITY PROTEIN: deoxyuridine 5'-triphosphate nucleotidohydrolase [Cucurbita moschata])

HSP 1 Score: 83.6 bits (205), Expect = 6.43e-18
Identity = 46/78 (58.97%), Postives = 50/78 (64.10%), Query Frame = 0 

Query: 1   SGLTLKHAIDVGAGTIDANYNGPMGVIL---------------------EKIVTPKVLEV 57
           SGL LKHAIDVGAG IDA+Y GP+GVIL                     EKIVTP+VLEV
Sbjct: 144 SGLALKHAIDVGAGVIDADYRGPLGVILFNHSDADFEVKMGDRIAQLILEKIVTPEVLEV 203

[Close]
BLAST of MC11g1341 vs. NCBI nr
Match: KAA0065242.1 (deoxyuridine 5'-triphosphate nucleotidohydrolase [Cucumis melo var. makuwa])

HSP 1 Score: 82.0 bits (201), Expect = 9.90e-18
Identity = 45/78 (57.69%), Postives = 50/78 (64.10%), Query Frame = 0 

Query: 1   SGLTLKHAIDVGAGTIDANYNGPMGVIL---------------------EKIVTPKVLEV 57
           SGL LKHAIDVGAG IDA+Y GP+GVIL                     EKIVTP+V+EV
Sbjct: 98  SGLALKHAIDVGAGVIDADYRGPVGVILFNHSDVDFEVKAGDRIAQMILEKIVTPEVMEV 157

[Close]
BLAST of MC11g1341 vs. ExPASy TrEMBL
Match: A0A6J1CSW8 (Deoxyuridine 5'-triphosphate nucleotidohydrolase OS=Momordica charantia OX=3673 GN=LOC111014003 PE=3 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.20e-18
Identity = 47/78 (60.26%), Postives = 51/78 (65.38%), Query Frame = 0 

Query: 1   SGLTLKHAIDVGAGTIDANYNGPMGVIL---------------------EKIVTPKVLEV 57
           SGL LKHAIDVGAG IDA+Y GP+GVIL                     EKIVTP+VLEV
Sbjct: 148 SGLALKHAIDVGAGVIDADYRGPVGVILFNHSDVDFEVKAGDRIAQLILEKIVTPEVLEV 207

[Close]
BLAST of MC11g1341 vs. ExPASy TrEMBL
Match: A0A6J1KC08 (Deoxyuridine 5'-triphosphate nucleotidohydrolase OS=Cucurbita maxima OX=3661 GN=LOC111491919 PE=3 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 3.11e-18
Identity = 46/78 (58.97%), Postives = 50/78 (64.10%), Query Frame = 0 

Query: 1   SGLTLKHAIDVGAGTIDANYNGPMGVIL---------------------EKIVTPKVLEV 57
           SGL LKHAIDVGAG IDA+Y GP+GVIL                     EKIVTP+VLEV
Sbjct: 144 SGLALKHAIDVGAGVIDADYRGPLGVILFNHSDADFEVKMGDRIAQLILEKIVTPEVLEV 203

[Close]
BLAST of MC11g1341 vs. ExPASy TrEMBL
Match: A0A6J1HDM4 (Deoxyuridine 5'-triphosphate nucleotidohydrolase OS=Cucurbita moschata OX=3662 GN=LOC111462556 PE=3 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 3.11e-18
Identity = 46/78 (58.97%), Postives = 50/78 (64.10%), Query Frame = 0 

Query: 1   SGLTLKHAIDVGAGTIDANYNGPMGVIL---------------------EKIVTPKVLEV 57
           SGL LKHAIDVGAG IDA+Y GP+GVIL                     EKIVTP+VLEV
Sbjct: 144 SGLALKHAIDVGAGVIDADYRGPLGVILFNHSDADFEVKMGDRIAQLILEKIVTPEVLEV 203

[Close]
BLAST of MC11g1341 vs. ExPASy TrEMBL
Match: A0A5A7VA97 (Deoxyuridine 5'-triphosphate nucleotidohydrolase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G005830 PE=3 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 4.79e-18
Identity = 45/78 (57.69%), Postives = 50/78 (64.10%), Query Frame = 0 

Query: 1   SGLTLKHAIDVGAGTIDANYNGPMGVIL---------------------EKIVTPKVLEV 57
           SGL LKHAIDVGAG IDA+Y GP+GVIL                     EKIVTP+V+EV
Sbjct: 98  SGLALKHAIDVGAGVIDADYRGPVGVILFNHSDVDFEVKAGDRIAQMILEKIVTPEVMEV 157

[Close]
BLAST of MC11g1341 vs. ExPASy TrEMBL
Match: A0A0A0LPA0 (Deoxyuridine 5'-triphosphate nucleotidohydrolase OS=Cucumis sativus OX=3659 GN=Csa_2G361570 PE=3 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 1.27e-17
Identity = 45/78 (57.69%), Postives = 50/78 (64.10%), Query Frame = 0 

Query: 1   SGLTLKHAIDVGAGTIDANYNGPMGVIL---------------------EKIVTPKVLEV 57
           SGL LKHAIDVGAG IDA+Y GP+GVIL                     EKIVTP+V+EV
Sbjct: 146 SGLALKHAIDVGAGVIDADYRGPVGVILFNHSDVDFEVKAGDRIAQMILEKIVTPEVIEV 205

[Close]
BLAST of MC11g1341 vs. TAIR 10
Match: AT3G46940.1 (DUTP-PYROPHOSPHATASE-LIKE 1 )

HSP 1 Score: 74.3 bits (181), Expect = 3.5e-14
Identity = 41/78 (52.56%), Postives = 46/78 (58.97%), Query Frame = 0 

Query: 1   SGLTLKHAIDVGAGTIDANYNGPMGVIL---------------------EKIVTPKVLEV 58
           SGL  KH+IDVGAG IDA+Y GP+GVIL                     EKIVTP V+EV
Sbjct: 89  SGLAWKHSIDVGAGVIDADYRGPVGVILFNHSDADFEVKFGDRIAQLIIEKIVTPDVVEV 148

The following BLAST results are available for this feature:
BLAST of MC11g1341 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q10FF91.3e-1353.85Deoxyuridine 5'-triphosphate nucleotidohydrolase OS=Oryza sativa subsp. japonica... [more]
Q9STG64.9e-1352.56Deoxyuridine 5'-triphosphate nucleotidohydrolase OS=Arabidopsis thaliana OX=3702... [more]
P325187.1e-1248.72Deoxyuridine 5'-triphosphate nucleotidohydrolase OS=Solanum lycopersicum OX=4081... [more]
Q54BW51.6e-0842.31Deoxyuridine 5'-triphosphate nucleotidohydrolase, mitochondrial OS=Dictyostelium... [more]
Q9P6Q52.1e-0843.59Probable deoxyuridine 5'-triphosphate nucleotidohydrolase OS=Schizosaccharomyces... [more]
BLAST of MC11g1341 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6598436.12.48e-1858.97hypothetical protein SDJN03_08214, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022144283.12.49e-1860.26deoxyuridine 5'-triphosphate nucleotidohydrolase [Momordica charantia][more]
XP_022996788.16.43e-1858.97LOW QUALITY PROTEIN: deoxyuridine 5'-triphosphate nucleotidohydrolase [Cucurbita... [more]
XP_022961935.16.43e-1858.97LOW QUALITY PROTEIN: deoxyuridine 5'-triphosphate nucleotidohydrolase [Cucurbita... [more]
KAA0065242.19.90e-1857.69deoxyuridine 5'-triphosphate nucleotidohydrolase [Cucumis melo var. makuwa][more]
BLAST of MC11g1341 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1CSW81.20e-1860.26Deoxyuridine 5'-triphosphate nucleotidohydrolase OS=Momordica charantia OX=3673 ... [more]
A0A6J1KC083.11e-1858.97Deoxyuridine 5'-triphosphate nucleotidohydrolase OS=Cucurbita maxima OX=3661 GN=... [more]
A0A6J1HDM43.11e-1858.97Deoxyuridine 5'-triphosphate nucleotidohydrolase OS=Cucurbita moschata OX=3662 G... [more]
A0A5A7VA974.79e-1857.69Deoxyuridine 5'-triphosphate nucleotidohydrolase OS=Cucumis melo var. makuwa OX=... [more]
A0A0A0LPA01.27e-1757.69Deoxyuridine 5'-triphosphate nucleotidohydrolase OS=Cucumis sativus OX=3659 GN=C... [more]
BLAST of MC11g1341 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G46940.13.5e-1452.56DUTP-PYROPHOSPHATASE-LIKE 1 [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036157dUTPase-like superfamilyGENE3D2.70.40.10coord: 1..28
e-value: 3.3E-6
score: 28.8
IPR036157dUTPase-like superfamilyGENE3D2.70.40.10coord: 29..57
e-value: 2.3E-5
score: 25.8
IPR036157dUTPase-like superfamilySUPERFAMILY51283dUTPase-likecoord: 1..55
NoneNo IPR availablePANTHERPTHR11241:SF12DEOXYURIDINE 5'-TRIPHOSPHATE NUCLEOTIDOHYDROLASEcoord: 1..29
NoneNo IPR availablePANTHERPTHR11241:SF12DEOXYURIDINE 5'-TRIPHOSPHATE NUCLEOTIDOHYDROLASEcoord: 26..57
IPR008181Deoxyuridine triphosphate nucleotidohydrolasePANTHERPTHR11241DEOXYURIDINE 5'-TRIPHOSPHATE NUCLEOTIDOHYDROLASEcoord: 26..57
IPR008181Deoxyuridine triphosphate nucleotidohydrolasePANTHERPTHR11241DEOXYURIDINE 5'-TRIPHOSPHATE NUCLEOTIDOHYDROLASEcoord: 1..29

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC11g1341.1MC11g1341.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006226 dUMP biosynthetic process
biological_process GO:0046081 dUTP catabolic process
molecular_function GO:0004170 dUTP diphosphatase activity
molecular_function GO:0000287 magnesium ion binding