MC11g1330 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC11g1330
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	RNA-binding protein 24 isoform X1
Location	MC11: 16440139 .. 16443808 (+)
RNA-Seq Expression	MC11g1330
Synteny	MC11g1330

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TAGAAAGCAACTTTGTCCTCATCCCTATTAAATGTTGGATAATTAAGTTTGAAAAATTCAAAAACATGGATTTTTAAAGAAAATAATGAATTGTCAAAATTTTAATAGTGGTGAGAGTAAGATTTGGTCATCACCGTTAAAAAGCAAGTATTTTCATGAACCAATCAACTTAAAATATTCGGTTGAATATTGATTTATTTATCTTTAACATGATATCAGAGCGAGAGGTACTGCCTTCGAACCAATTTAAGCTTTTGGGTCCAGAGTATTTAAACATTATTTTTTTCTCCTCTCTAACTTTTGCTCTCTTTCCCTCCTCCTCCCTCTCTCCCATTTCACTTTCGCTTTTGTTTCCATCTCTGACCTAATTGTCTCTGTGATCCATTTCCATTCCCATTATTTCCATTCCTCCCTCTCTCTCTCTCCACACCTCTCATCGCCTCCGATCCATCCAAGCCAAAAAACCCAAAACTTGAATTTAGATTTATAACCCATTTGAGAGTTTGTTTTAGGTTGTTGAAGAATAGAAGAAGATCATGACTCCAGCTAACTTGGCAACTCAGTTTGGGGACACCACTTACACCAAGGTCTTCGTCGGCGGCTTGGCCTGGGAAACCCACAAGGACACCATGAAGAAATACTTCGAGCAGTTCGGCGACATCTTGGAAGCCGTCGTCATTACCGACAAGGCCACCGGCCGATCCAAGGGCTACGGATTCGTAAGTCCTATCTTGATAAACCCTTGTAACGTCTCTAGCTTATCTCTGCTAAAACTCTTACCAAATGGATCCTGAGTTTCAGGTCACTTTCCGCGAGCCCGAGGCTGCGATGAGGGCCTGCGTCGACGCTGCTCCGGTCATCGACGGCCGGAGGGCCAACTGCAACCTTGCTTCCCTCGGCGTCCAGAGATCCAAACCCTCCACGCCTAAGCACGGTATTAAAATAATCCCAGCTTTTTTAGATCTATCAAATAACAATCCTTCGATGCTTACCGATACAAGATGAAACTTCATGTGATAAATGATGGTATTTAATTTGTTATAAAGTTAGATGGATTAATTGATTTGCGTTTGGTTTTGTTGTGGTTTAAAATTGTGTGGGAAAATAAAGAGAAAAAGAAATGGGAATTGACAGGAGGAGGAGGAGGGAGGAATTTTAGGGTATTGAGCTCTTTCCAGAGTGGCTTTGGAGGGAATGTTGGATCAGCTTTTCATTCAGCTGCAACTTTTCCTCATTATGCTGTCCAGCAAGGGATCCCTTACAATCTCTATGGGTAACAATGTTTTTCTCTCTCTCTCTCTTCACTTTACTTTATTACAAACCCACAAAAAAAAATGAAAAAAAAAAGTTGTCTTTGCTTCTTAATCACTCTACAATTCAATTCCAATTTCCTCTTTAAGTTGCTACAAAACTTGTTTTCATCTCATGTGTCATTGATGAATCTTTGCTTCTTTTTGCCCTCCTCCTTTTCTTTTGTTCTACCCCATGCATGCATTTGCATTTGCATGTATCGCTTTATTCACGTCTCGTCTTTTTGTAGTAATTAAAATAAATACGTATTTTCAAATGAAGGATGATTATTATGCAATATGCATGATTTTTACTACTTACGACTACTAAAAATTAGTCGTACAATACTTTAGGTGTTTACTAGTCAGTATTGATCATCTTTAGTAGAAAATAAAAAAGAAAAAAATGTTCTTTTTCTACATTTATCCCTCCTACTGACAAAAGAACATTTCTACTCATCAAGAGTCAATAGAGTAGGTATAGTTATTATCCTATATAGCATAGAATTTGAAATTGTACTAAATAATAGTATAATCTAAATCAAATTCAAACTATGAAAAGTTAATGGAAAAAAATGAAGAGTTGGCTAATTTCTTGATAAATCGTTGTTTTTCAGGTACTCTTCCTACTCGCCCGACTACACTTATCCTACGGTTTGTACAAACTTCCTTCCTTTCTCTACATATCTCTTCTGTTCTTCAAATATCTTTCAAGTAAAAATAAAATAAAAATAATTAAATCCAATGATACTTTTTTAGAACAACGACATGGATATGTGTATTTAAACGAGAATAATAATTATCCAAACAAAGAAAAAAAAAGAAATGGTAAATTTGTAATATTCGTGAGAGTGGTCAAAGGGTTGAAAAGTAAAGTTTTTTTTTTAATTTTTTAGACCCCATTCTGGTATTTTTTTTTTTCTGTCTCTTGTCGTCTTCTCCGACAGTTTTTGTTCCTACATTTACTATGTAACAGTGAATCACTTTGTTTGTTACAGTTTCTTTCTTTACACGTTCTTCCATGCAACTGTAATCATCTAATTCCCCACTCCCACCCCACTACTTTAAAAAACAATTTTATTACTACTTTTTGTTTTTAAATATTATCTAAATTAATAAATAAATGTTCGGTTTAAATATTATTGTATATTTTGGATTTGATTCATCATGGTTCTTATACTTTTAAATATATATTTAGGTTAGGTATTTTTTTAACTTTTAATAAATAAATGTTCGGTTTAAATATTATTGTATATTTTGGATTTGATTCACTATGGTTCTTATACTTTTAAATATATATTTAGGTTAGGTATTTTTTTAACTTTTATGCCTTTAGTAACTGTGTTTTCATAATATTAATGTACTTAGTGATTATTTTGGTCTTTTCATTTTCATTTTTTTCGTGATAACTTTAGTATGACACTCCAATATTTATTAAATTTCTTGAAATATAGTCATAAATCTGTATTTAAAAGATTTTCATTAGGTATAAATTTTGTGTTAAAGTCAACATGACCTCAGCTAAGTGATAATTGATACTTGTCTCTTTGATAGGGGAGGTCATGACTTCGAATTCTCTCATCCCACCTGTTGTACTAAGAAAAATTGTACTAAAATTTTACAAATAGACACTAAATCATTACTAGTTATTTTTTAAAAACAGAATGATGAAAATAGACGGTTTGAAAGTATAATAGCCTAAAATAAGCAAAAATTACAATAATTCAAAAGCATTTGATCAAAATAAACCAAAGTCAAAAGTAGGTATAGATCAAAATAGTATTTAATTAAACATAAATTTTTCATCCATTTTAAATAAGTTTAATATTGGGAAATTGAAATCTTGCTCAAACATTTTATTGATATTGTTGTGTTTTGTCAATTTATTTATGATATAACGAAAATGTCGATTCACTCTACAATGTTTAGTATAACACATGAGAATGTGAGATGGAACTAGTAGAATTAAGTCAATCTAACATTGATGGTATGGTAAAACAAAAATGGGAGTGTTCTTATTTATCACGTGATTGGTTTTTTTGTTCATGGTCTTTGTTTGGCTGCAGAGCTACTACAATGTGTACGGCGGGGCAACTGCACAGTACCCCATGTACGGAACAGGTCCCGGCGGCATAATGAACGGAGCTGCGGCAGCGGCGGCAGCGTTCTACCCGTATTTCCAATTTGGGGAAGGAAGCGGCGGCGGAGGCGGCAACGGATTCACCGCCGGTTCGGGGCAGCAGGGCGGCTACGGCGTGCAGTATCCTCACCACCTTTTTCAGTACTCAGCCGCCATTAATTCGTCTGCAACAAGCTTCCCTCAGCACTACGCTGCTCCTCCCATGTCTCTCCCTCCCACGCCCCCCACCTTGCCATCAGGT

mRNA sequence

TAGAAAGCAACTTTGTCCTCATCCCTATTAAATGTTGGATAATTAAGTTTGAAAAATTCAAAAACATGGATTTTTAAAGAAAATAATGAATTGTCAAAATTTTAATAGTGGTGAGAGTAAGATTTGGTCATCACCGTTAAAAAGCAAGTATTTTCATGAACCAATCAACTTAAAATATTCGGTTGAATATTGATTTATTTATCTTTAACATGATATCAGAGCGAGAGGTACTGCCTTCGAACCAATTTAAGCTTTTGGGTCCAGAGTATTTAAACATTATTTTTTTCTCCTCTCTAACTTTTGCTCTCTTTCCCTCCTCCTCCCTCTCTCCCATTTCACTTTCGCTTTTGTTTCCATCTCTGACCTAATTGTCTCTGTGATCCATTTCCATTCCCATTATTTCCATTCCTCCCTCTCTCTCTCTCCACACCTCTCATCGCCTCCGATCCATCCAAGCCAAAAAACCCAAAACTTGAATTTAGATTTATAACCCATTTGAGAGTTTGTTTTAGGTTGTTGAAGAATAGAAGAAGATCATGACTCCAGCTAACTTGGCAACTCAGTTTGGGGACACCACTTACACCAAGGTCTTCGTCGGCGGCTTGGCCTGGGAAACCCACAAGGACACCATGAAGAAATACTTCGAGCAGTTCGGCGACATCTTGGAAGCCGTCGTCATTACCGACAAGGCCACCGGCCGATCCAAGGGCTACGGATTCGTCACTTTCCGCGAGCCCGAGGCTGCGATGAGGGCCTGCGTCGACGCTGCTCCGGTCATCGACGGCCGGAGGGCCAACTGCAACCTTGCTTCCCTCGGCGTCCAGAGATCCAAACCCTCCACGCCTAAGCACGAGAAAAAGAAATGGGAATTGACAGGAGGAGGAGGAGGGAGGAATTTTAGGGTATTGAGCTCTTTCCAGAGTGGCTTTGGAGGGAATGTTGGATCAGCTTTTCATTCAGCTGCAACTTTTCCTCATTATGCTGTCCAGCAAGGGATCCCTTACAATCTCTATGGGTACTCTTCCTACTCGCCCGACTACACTTATCCTACGAGCTACTACAATGTGTACGGCGGGGCAACTGCACAGTACCCCATGTACGGAACAGGTCCCGGCGGCATAATGAACGGAGCTGCGGCAGCGGCGGCAGCGTTCTACCCGTATTTCCAATTTGGGGAAGGAAGCGGCGGCGGAGGCGGCAACGGATTCACCGCCGGTTCGGGGCAGCAGGGCGGCTACGGCGTGCAGTATCCTCACCACCTTTTTCAGTACTCAGCCGCCATTAATTCGTCTGCAACAAGCTTCCCTCAGCACTACGCTGCTCCTCCCATGTCTCTCCCTCCCACGCCCCCCACCTTGCCATCAGGT

Coding sequence (CDS)

ATGACTCCAGCTAACTTGGCAACTCAGTTTGGGGACACCACTTACACCAAGGTCTTCGTCGGCGGCTTGGCCTGGGAAACCCACAAGGACACCATGAAGAAATACTTCGAGCAGTTCGGCGACATCTTGGAAGCCGTCGTCATTACCGACAAGGCCACCGGCCGATCCAAGGGCTACGGATTCGTCACTTTCCGCGAGCCCGAGGCTGCGATGAGGGCCTGCGTCGACGCTGCTCCGGTCATCGACGGCCGGAGGGCCAACTGCAACCTTGCTTCCCTCGGCGTCCAGAGATCCAAACCCTCCACGCCTAAGCACGAGAAAAAGAAATGGGAATTGACAGGAGGAGGAGGAGGGAGGAATTTTAGGGTATTGAGCTCTTTCCAGAGTGGCTTTGGAGGGAATGTTGGATCAGCTTTTCATTCAGCTGCAACTTTTCCTCATTATGCTGTCCAGCAAGGGATCCCTTACAATCTCTATGGGTACTCTTCCTACTCGCCCGACTACACTTATCCTACGAGCTACTACAATGTGTACGGCGGGGCAACTGCACAGTACCCCATGTACGGAACAGGTCCCGGCGGCATAATGAACGGAGCTGCGGCAGCGGCGGCAGCGTTCTACCCGTATTTCCAATTTGGGGAAGGAAGCGGCGGCGGAGGCGGCAACGGATTCACCGCCGGTTCGGGGCAGCAGGGCGGCTACGGCGTGCAGTATCCTCACCACCTTTTTCAGTACTCAGCCGCCATTAATTCGTCTGCAACAAGCTTCCCTCAGCACTACGCTGCTCCTCCCATGTCTCTCCCTCCCACGCCCCCCACCTTGCCATCAGGT

Protein sequence

MTPANLATQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGRNFRVLSSFQSGFGGNVGSAFHSAATFPHYAVQQGIPYNLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTGPGGIMNGAAAAAAAFYPYFQFGEGSGGGGGNGFTAGSGQQGGYGVQYPHHLFQYSAAINSSATSFPQHYAAPPMSLPPTPPTLPSG

Homology

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BLAST of MC11g1330 vs. ExPASy Swiss-Prot
Match: Q9M1S3 (Probable RNA-binding protein ARP1 OS=Arabidopsis thaliana OX=3702 GN=ARP1 PE=2 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 1.2e-24
Identity = 103/276 (37.32%), Postives = 134/276 (48.55%), Query Frame = 0


Query: 2   TPANLATQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGF 61
           T  N+   FGDT  TKVFVGGLAW+THK+ M  +F ++GDILEAV+I+DK T RSKGYGF
Sbjct: 3   TSNNVNGCFGDTKLTKVFVGGLAWDTHKEAMYDHFIKYGDILEAVIISDKLTRRSKGYGF 62

Query: 62  VTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGRNF 121
           VTF++ +AA RAC D+ P+I+GRRANCNLASLG +  K  T    ++        G +N 
Sbjct: 63  VTFKDAKAATRACEDSTPIINGRRANCNLASLGGRLRKSPTMTSPQQ--------GPKNG 122

Query: 122 RVLSSFQSGFGGNVGSAFHSAATFPHYAVQ--QGIPYNLYGYSSYSPDYTYPTSYYNVYG 181
               +     G +    + S  T   +  Q  Q +P+  YGY S    Y  P   +N   
Sbjct: 123 N--RATPPHVGNHSQWYYPSGFTNQQHQQQNHQAVPF--YGYPS---AYVAPNMTFNQKV 182

Query: 182 GATAQYPMYGTGPGGIMNGAAA---AAAAFYPYFQFGEGSGGGGGNGFTAGSGQQGGYGV 241
           G            G  MNG  A         P  Q+      GGG      +     +  
Sbjct: 183 GYVG---------GTYMNGYYAQMQPQPQSQPQPQYYHHHMYGGGRVMVGAASPMVPFYT 242

Query: 242 QYPHHLFQYSAAINSSATSFPQHYAAPPMSLPPTPP 273
            YP+H         S A  FPQ   + P+S   TPP
Sbjct: 243 VYPYH--------QSQAIGFPQPSFSKPLSF-STPP 245

[Close]

BLAST of MC11g1330 vs. ExPASy Swiss-Prot
Match: Q76LC6 (RNA-binding protein 24 OS=Danio rerio OX=7955 GN=rbm24 PE=2 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 3.5e-24
Identity = 53/85 (62.35%), Postives = 66/85 (77.65%), Query Frame = 0


Query: 12 DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAM 71
          DTTYTK+FVGGL + T   +++KYFE FG+I EAVVITD+ TG+S+GYGFVT  +  AA 
Sbjct: 7  DTTYTKIFVGGLPYHTTDSSLRKYFEVFGEIEEAVVITDRQTGKSRGYGFVTMADRSAAD 66

Query: 72 RACVDAAPVIDGRRANCNLASLGVQ 97
          RAC D  P+IDGR+AN NLA LG +
Sbjct: 67 RACKDPNPIIDGRKANVNLAYLGAK 91

[Close]

BLAST of MC11g1330 vs. ExPASy Swiss-Prot
Match: Q9I8B3 (RNA-binding protein 24-B OS=Xenopus laevis OX=8355 GN=rbm24-b PE=2 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 3.0e-23
Identity = 86/219 (39.27%), Postives = 110/219 (50.23%), Query Frame = 0


Query: 12  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAM 71
           DTTYTK+FVGGL + T   +++KYFE FGDI EAVVITD+ TG+S+GYGFVT  +  AA 
Sbjct: 7   DTTYTKIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAE 66

Query: 72  RACVDAAPVIDGRRANCNLASL-------------GVQRSKPS-------TPKHEKKKWE 131
           RAC D  P+IDGR+AN NLA L             GVQ+  P+        P H      
Sbjct: 67  RACKDPNPIIDGRKANVNLAYLGAKPRIMQPGFAFGVQQIHPALVQRPYGIPAHYVYPQA 126

Query: 132 LTGGGGGRNFRVLSSFQSGFGGNVGSAF-HSAATFPHYAVQQGIPYNLYGYSSYSPDYTY 191
               G      V+   Q     +      +++A +  YA      Y+ Y Y++      Y
Sbjct: 127 YVQQG-----LVIPHVQQTAAASTSPYIDYTSAAYAQYAAAAAAAYDQYPYAASPATTGY 186

Query: 192 PTSYYNVYGGATAQYPMYGTGPGGIMNGAAAAAAAFYPY 210
            T+    YG A  Q P+    PG     AAAAAAAF  Y
Sbjct: 187 VTA--AGYGYAVPQ-PLTAATPG----TAAAAAAAFAQY 213

[Close]

BLAST of MC11g1330 vs. ExPASy Swiss-Prot
Match: Q5ZJX4 (RNA-binding protein 38 OS=Gallus gallus OX=9031 GN=RBM38 PE=2 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.5e-22
Identity = 84/211 (39.81%), Postives = 103/211 (48.82%), Query Frame = 0


Query: 12  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAM 71
           DTT+TK+FVGGL + T   +++KYFE FGDI EAVVITD+ TG+S+GYGFVT  +  AA 
Sbjct: 7   DTTFTKIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAE 66

Query: 72  RACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGRNFRVLSSFQSGF 131
           RAC D  P+IDGR+AN NLA LG   +KP                         S Q+GF
Sbjct: 67  RACKDPNPIIDGRKANVNLAYLG---AKP------------------------RSIQTGF 126

Query: 132 GGNVGSAFHSA------ATFPHYAVQQG-------IPYNLYGYSSYSPDYTYPTSYYNVY 191
              V    H A         PHY   Q        IP  +   +S   DYT  +  Y+ Y
Sbjct: 127 TIGV-QQLHPAFIQRPFGLTPHYVYPQAIIQPSVVIPTPVQSIASPYIDYTAASQAYSQY 179

Query: 192 GGATAQYPMYGTGPGGIMNGAAAAAAAFYPY 210
              TA Y  Y          AA+ AA F  Y
Sbjct: 187 --TTAAYDQYPY--------AASPAAGFVGY 179

[Close]

BLAST of MC11g1330 vs. ExPASy Swiss-Prot
Match: Q6P8A7 (RNA-binding protein 24 OS=Xenopus tropicalis OX=8364 GN=rbm24 PE=2 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.6e-21
Identity = 88/234 (37.61%), Postives = 113/234 (48.29%), Query Frame = 0


Query: 12  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAM 71
           DTTYTK+FVGGL + T   +++KYFE FGDI EAVVITD+ TG+S+GYGFVT  +  AA 
Sbjct: 7   DTTYTKIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAE 66

Query: 72  RACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGRNFRVLSSFQSGF 131
           RAC D  P+IDGR+AN NLA LG   +KP                     R++   Q GF
Sbjct: 67  RACKDPNPIIDGRKANVNLAYLG---AKP---------------------RIM---QPGF 126

Query: 132 GGNVGSAFHSAATFPHYAVQQGIP-YNLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGT 191
              V     +    P      GIP + +Y ++   P    P         +T+ Y  Y +
Sbjct: 127 AFGVQQIHPALIQRPF-----GIPAHYVYPHAFVQPGVVIP-HVQQAAAASTSPYIDYTS 186

Query: 192 GPGGIMNGAAAAAAAF--YPYFQFGEGSGGGGGNGFTAGSGQQGGYGVQYPHHL 243
                 + AAAAAAA+  YPY            +  T G     GYG   P  L
Sbjct: 187 AAYAQYSAAAAAAAAYDQYPY----------AASPATTGYVTTAGYGYAVPQPL 197

[Close]

BLAST of MC11g1330 vs. NCBI nr
Match: XP_022157230.1 (RNA-binding protein 24 isoform X1 [Momordica charantia])

HSP 1 Score: 556 bits (1433), Expect = 1.36e-199
Identity = 277/277 (100.00%), Postives = 277/277 (100.00%), Query Frame = 0


Query: 1   MTPANLATQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG 60
           MTPANLATQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG
Sbjct: 1   MTPANLATQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG 60

Query: 61  FVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGRN 120
           FVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGRN
Sbjct: 61  FVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGRN 120

Query: 121 FRVLSSFQSGFGGNVGSAFHSAATFPHYAVQQGIPYNLYGYSSYSPDYTYPTSYYNVYGG 180
           FRVLSSFQSGFGGNVGSAFHSAATFPHYAVQQGIPYNLYGYSSYSPDYTYPTSYYNVYGG
Sbjct: 121 FRVLSSFQSGFGGNVGSAFHSAATFPHYAVQQGIPYNLYGYSSYSPDYTYPTSYYNVYGG 180

Query: 181 ATAQYPMYGTGPGGIMNGAAAAAAAFYPYFQFGEGSGGGGGNGFTAGSGQQGGYGVQYPH 240
           ATAQYPMYGTGPGGIMNGAAAAAAAFYPYFQFGEGSGGGGGNGFTAGSGQQGGYGVQYPH
Sbjct: 181 ATAQYPMYGTGPGGIMNGAAAAAAAFYPYFQFGEGSGGGGGNGFTAGSGQQGGYGVQYPH 240

Query: 241 HLFQYSAAINSSATSFPQHYAAPPMSLPPTPPTLPSG 277
           HLFQYSAAINSSATSFPQHYAAPPMSLPPTPPTLPSG
Sbjct: 241 HLFQYSAAINSSATSFPQHYAAPPMSLPPTPPTLPSG 277

[Close]

BLAST of MC11g1330 vs. NCBI nr
Match: XP_022157231.1 (RNA-binding protein 24 isoform X2 [Momordica charantia])

HSP 1 Score: 554 bits (1427), Expect = 9.26e-199
Identity = 276/276 (100.00%), Postives = 276/276 (100.00%), Query Frame = 0


Query: 1   MTPANLATQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG 60
           MTPANLATQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG
Sbjct: 1   MTPANLATQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG 60

Query: 61  FVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGRN 120
           FVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGRN
Sbjct: 61  FVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGRN 120

Query: 121 FRVLSSFQSGFGGNVGSAFHSAATFPHYAVQQGIPYNLYGYSSYSPDYTYPTSYYNVYGG 180
           FRVLSSFQSGFGGNVGSAFHSAATFPHYAVQQGIPYNLYGYSSYSPDYTYPTSYYNVYGG
Sbjct: 121 FRVLSSFQSGFGGNVGSAFHSAATFPHYAVQQGIPYNLYGYSSYSPDYTYPTSYYNVYGG 180

Query: 181 ATAQYPMYGTGPGGIMNGAAAAAAAFYPYFQFGEGSGGGGGNGFTAGSGQQGGYGVQYPH 240
           ATAQYPMYGTGPGGIMNGAAAAAAAFYPYFQFGEGSGGGGGNGFTAGSGQQGGYGVQYPH
Sbjct: 181 ATAQYPMYGTGPGGIMNGAAAAAAAFYPYFQFGEGSGGGGGNGFTAGSGQQGGYGVQYPH 240

Query: 241 HLFQYSAAINSSATSFPQHYAAPPMSLPPTPPTLPS 276
           HLFQYSAAINSSATSFPQHYAAPPMSLPPTPPTLPS
Sbjct: 241 HLFQYSAAINSSATSFPQHYAAPPMSLPPTPPTLPS 276

[Close]

BLAST of MC11g1330 vs. NCBI nr
Match: XP_022157232.1 (RNA-binding protein 24 isoform X3 [Momordica charantia])

HSP 1 Score: 531 bits (1368), Expect = 8.18e-190
Identity = 269/277 (97.11%), Postives = 269/277 (97.11%), Query Frame = 0


Query: 1   MTPANLATQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG 60
           MTPANLATQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG
Sbjct: 1   MTPANLATQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG 60

Query: 61  FVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGRN 120
           FVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKH        GGGGGRN
Sbjct: 61  FVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKH--------GGGGGRN 120

Query: 121 FRVLSSFQSGFGGNVGSAFHSAATFPHYAVQQGIPYNLYGYSSYSPDYTYPTSYYNVYGG 180
           FRVLSSFQSGFGGNVGSAFHSAATFPHYAVQQGIPYNLYGYSSYSPDYTYPTSYYNVYGG
Sbjct: 121 FRVLSSFQSGFGGNVGSAFHSAATFPHYAVQQGIPYNLYGYSSYSPDYTYPTSYYNVYGG 180

Query: 181 ATAQYPMYGTGPGGIMNGAAAAAAAFYPYFQFGEGSGGGGGNGFTAGSGQQGGYGVQYPH 240
           ATAQYPMYGTGPGGIMNGAAAAAAAFYPYFQFGEGSGGGGGNGFTAGSGQQGGYGVQYPH
Sbjct: 181 ATAQYPMYGTGPGGIMNGAAAAAAAFYPYFQFGEGSGGGGGNGFTAGSGQQGGYGVQYPH 240

Query: 241 HLFQYSAAINSSATSFPQHYAAPPMSLPPTPPTLPSG 277
           HLFQYSAAINSSATSFPQHYAAPPMSLPPTPPTLPSG
Sbjct: 241 HLFQYSAAINSSATSFPQHYAAPPMSLPPTPPTLPSG 269

[Close]

BLAST of MC11g1330 vs. NCBI nr
Match: XP_022157233.1 (RNA-binding protein 24 isoform X4 [Momordica charantia])

HSP 1 Score: 529 bits (1362), Expect = 5.59e-189
Identity = 268/276 (97.10%), Postives = 268/276 (97.10%), Query Frame = 0


Query: 1   MTPANLATQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG 60
           MTPANLATQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG
Sbjct: 1   MTPANLATQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG 60

Query: 61  FVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGRN 120
           FVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKH        GGGGGRN
Sbjct: 61  FVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKH--------GGGGGRN 120

Query: 121 FRVLSSFQSGFGGNVGSAFHSAATFPHYAVQQGIPYNLYGYSSYSPDYTYPTSYYNVYGG 180
           FRVLSSFQSGFGGNVGSAFHSAATFPHYAVQQGIPYNLYGYSSYSPDYTYPTSYYNVYGG
Sbjct: 121 FRVLSSFQSGFGGNVGSAFHSAATFPHYAVQQGIPYNLYGYSSYSPDYTYPTSYYNVYGG 180

Query: 181 ATAQYPMYGTGPGGIMNGAAAAAAAFYPYFQFGEGSGGGGGNGFTAGSGQQGGYGVQYPH 240
           ATAQYPMYGTGPGGIMNGAAAAAAAFYPYFQFGEGSGGGGGNGFTAGSGQQGGYGVQYPH
Sbjct: 181 ATAQYPMYGTGPGGIMNGAAAAAAAFYPYFQFGEGSGGGGGNGFTAGSGQQGGYGVQYPH 240

Query: 241 HLFQYSAAINSSATSFPQHYAAPPMSLPPTPPTLPS 276
           HLFQYSAAINSSATSFPQHYAAPPMSLPPTPPTLPS
Sbjct: 241 HLFQYSAAINSSATSFPQHYAAPPMSLPPTPPTLPS 268

[Close]

BLAST of MC11g1330 vs. NCBI nr
Match: XP_022930178.1 (RNA-binding protein 38 isoform X1 [Cucurbita moschata] >XP_022974074.1 RNA-binding protein 38 isoform X1 [Cucurbita maxima])

HSP 1 Score: 511 bits (1316), Expect = 8.59e-182
Identity = 254/277 (91.70%), Postives = 265/277 (95.67%), Query Frame = 0


Query: 1   MTPANLATQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG 60
           MTP+N+A+QFGDTTYTKVFVGGLAWET KDTMK YFEQFGDILEAVVITDKATGRSKGYG
Sbjct: 1   MTPSNMASQFGDTTYTKVFVGGLAWETQKDTMKNYFEQFGDILEAVVITDKATGRSKGYG 60

Query: 61  FVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGRN 120
           FVTFREP+AAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGRN
Sbjct: 61  FVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGRN 120

Query: 121 FRVLSSFQSGFGGNVGSAFHSAATFPHYAVQQGIPYNLYGYSSYSPDYTYPTSYYNVYGG 180
           FRVLSSFQ+GFGGNVGSAFHS  TFPHYA+ QGIPYNLYGYSSYSPDY YPTSYYNVYGG
Sbjct: 121 FRVLSSFQTGFGGNVGSAFHSTPTFPHYAIHQGIPYNLYGYSSYSPDYAYPTSYYNVYGG 180

Query: 181 ATAQYPMYGTGPGGIMNGAAAAAAAFYPYFQFGEGSGGGGGNGFTAGSGQQGGYGVQYPH 240
           ATAQYPMYGTGPGGI++GAAAAAAAFYPYFQFGEGSGGG  NGFT GSGQQG YGVQYPH
Sbjct: 181 ATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGGGA-NGFTGGSGQQG-YGVQYPH 240

Query: 241 HLFQYSAAINSSATSFPQHYAAPPMSLPPTPPTLPSG 277
           HL QYSAA+NS+ T+FPQHYAAPPMSLPPTPPTLPSG
Sbjct: 241 HLLQYSAALNSTPTTFPQHYAAPPMSLPPTPPTLPSG 275

[Close]

BLAST of MC11g1330 vs. ExPASy TrEMBL
Match: A0A6J1DSJ0 (RNA-binding protein 24 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111023991 PE=4 SV=1)

HSP 1 Score: 556 bits (1433), Expect = 6.57e-200
Identity = 277/277 (100.00%), Postives = 277/277 (100.00%), Query Frame = 0


Query: 1   MTPANLATQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG 60
           MTPANLATQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG
Sbjct: 1   MTPANLATQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG 60

Query: 61  FVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGRN 120
           FVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGRN
Sbjct: 61  FVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGRN 120

Query: 121 FRVLSSFQSGFGGNVGSAFHSAATFPHYAVQQGIPYNLYGYSSYSPDYTYPTSYYNVYGG 180
           FRVLSSFQSGFGGNVGSAFHSAATFPHYAVQQGIPYNLYGYSSYSPDYTYPTSYYNVYGG
Sbjct: 121 FRVLSSFQSGFGGNVGSAFHSAATFPHYAVQQGIPYNLYGYSSYSPDYTYPTSYYNVYGG 180

Query: 181 ATAQYPMYGTGPGGIMNGAAAAAAAFYPYFQFGEGSGGGGGNGFTAGSGQQGGYGVQYPH 240
           ATAQYPMYGTGPGGIMNGAAAAAAAFYPYFQFGEGSGGGGGNGFTAGSGQQGGYGVQYPH
Sbjct: 181 ATAQYPMYGTGPGGIMNGAAAAAAAFYPYFQFGEGSGGGGGNGFTAGSGQQGGYGVQYPH 240

Query: 241 HLFQYSAAINSSATSFPQHYAAPPMSLPPTPPTLPSG 277
           HLFQYSAAINSSATSFPQHYAAPPMSLPPTPPTLPSG
Sbjct: 241 HLFQYSAAINSSATSFPQHYAAPPMSLPPTPPTLPSG 277

[Close]

BLAST of MC11g1330 vs. ExPASy TrEMBL
Match: A0A6J1DXD0 (RNA-binding protein 24 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111023991 PE=4 SV=1)

HSP 1 Score: 554 bits (1427), Expect = 4.49e-199
Identity = 276/276 (100.00%), Postives = 276/276 (100.00%), Query Frame = 0


Query: 1   MTPANLATQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG 60
           MTPANLATQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG
Sbjct: 1   MTPANLATQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG 60

Query: 61  FVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGRN 120
           FVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGRN
Sbjct: 61  FVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGRN 120

Query: 121 FRVLSSFQSGFGGNVGSAFHSAATFPHYAVQQGIPYNLYGYSSYSPDYTYPTSYYNVYGG 180
           FRVLSSFQSGFGGNVGSAFHSAATFPHYAVQQGIPYNLYGYSSYSPDYTYPTSYYNVYGG
Sbjct: 121 FRVLSSFQSGFGGNVGSAFHSAATFPHYAVQQGIPYNLYGYSSYSPDYTYPTSYYNVYGG 180

Query: 181 ATAQYPMYGTGPGGIMNGAAAAAAAFYPYFQFGEGSGGGGGNGFTAGSGQQGGYGVQYPH 240
           ATAQYPMYGTGPGGIMNGAAAAAAAFYPYFQFGEGSGGGGGNGFTAGSGQQGGYGVQYPH
Sbjct: 181 ATAQYPMYGTGPGGIMNGAAAAAAAFYPYFQFGEGSGGGGGNGFTAGSGQQGGYGVQYPH 240

Query: 241 HLFQYSAAINSSATSFPQHYAAPPMSLPPTPPTLPS 276
           HLFQYSAAINSSATSFPQHYAAPPMSLPPTPPTLPS
Sbjct: 241 HLFQYSAAINSSATSFPQHYAAPPMSLPPTPPTLPS 276

[Close]

BLAST of MC11g1330 vs. ExPASy TrEMBL
Match: A0A6J1DU09 (RNA-binding protein 24 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111023991 PE=4 SV=1)

HSP 1 Score: 531 bits (1368), Expect = 3.96e-190
Identity = 269/277 (97.11%), Postives = 269/277 (97.11%), Query Frame = 0


Query: 1   MTPANLATQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG 60
           MTPANLATQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG
Sbjct: 1   MTPANLATQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG 60

Query: 61  FVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGRN 120
           FVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKH        GGGGGRN
Sbjct: 61  FVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKH--------GGGGGRN 120

Query: 121 FRVLSSFQSGFGGNVGSAFHSAATFPHYAVQQGIPYNLYGYSSYSPDYTYPTSYYNVYGG 180
           FRVLSSFQSGFGGNVGSAFHSAATFPHYAVQQGIPYNLYGYSSYSPDYTYPTSYYNVYGG
Sbjct: 121 FRVLSSFQSGFGGNVGSAFHSAATFPHYAVQQGIPYNLYGYSSYSPDYTYPTSYYNVYGG 180

Query: 181 ATAQYPMYGTGPGGIMNGAAAAAAAFYPYFQFGEGSGGGGGNGFTAGSGQQGGYGVQYPH 240
           ATAQYPMYGTGPGGIMNGAAAAAAAFYPYFQFGEGSGGGGGNGFTAGSGQQGGYGVQYPH
Sbjct: 181 ATAQYPMYGTGPGGIMNGAAAAAAAFYPYFQFGEGSGGGGGNGFTAGSGQQGGYGVQYPH 240

Query: 241 HLFQYSAAINSSATSFPQHYAAPPMSLPPTPPTLPSG 277
           HLFQYSAAINSSATSFPQHYAAPPMSLPPTPPTLPSG
Sbjct: 241 HLFQYSAAINSSATSFPQHYAAPPMSLPPTPPTLPSG 269

[Close]

BLAST of MC11g1330 vs. ExPASy TrEMBL
Match: A0A6J1DSU9 (RNA-binding protein 24 isoform X4 OS=Momordica charantia OX=3673 GN=LOC111023991 PE=4 SV=1)

HSP 1 Score: 529 bits (1362), Expect = 2.71e-189
Identity = 268/276 (97.10%), Postives = 268/276 (97.10%), Query Frame = 0


Query: 1   MTPANLATQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG 60
           MTPANLATQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG
Sbjct: 1   MTPANLATQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG 60

Query: 61  FVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGRN 120
           FVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKH        GGGGGRN
Sbjct: 61  FVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKH--------GGGGGRN 120

Query: 121 FRVLSSFQSGFGGNVGSAFHSAATFPHYAVQQGIPYNLYGYSSYSPDYTYPTSYYNVYGG 180
           FRVLSSFQSGFGGNVGSAFHSAATFPHYAVQQGIPYNLYGYSSYSPDYTYPTSYYNVYGG
Sbjct: 121 FRVLSSFQSGFGGNVGSAFHSAATFPHYAVQQGIPYNLYGYSSYSPDYTYPTSYYNVYGG 180

Query: 181 ATAQYPMYGTGPGGIMNGAAAAAAAFYPYFQFGEGSGGGGGNGFTAGSGQQGGYGVQYPH 240
           ATAQYPMYGTGPGGIMNGAAAAAAAFYPYFQFGEGSGGGGGNGFTAGSGQQGGYGVQYPH
Sbjct: 181 ATAQYPMYGTGPGGIMNGAAAAAAAFYPYFQFGEGSGGGGGNGFTAGSGQQGGYGVQYPH 240

Query: 241 HLFQYSAAINSSATSFPQHYAAPPMSLPPTPPTLPS 276
           HLFQYSAAINSSATSFPQHYAAPPMSLPPTPPTLPS
Sbjct: 241 HLFQYSAAINSSATSFPQHYAAPPMSLPPTPPTLPS 268

[Close]

BLAST of MC11g1330 vs. ExPASy TrEMBL
Match: A0A6J1IGG9 (RNA-binding protein 38 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111472695 PE=4 SV=1)

HSP 1 Score: 511 bits (1316), Expect = 4.16e-182
Identity = 254/277 (91.70%), Postives = 265/277 (95.67%), Query Frame = 0


Query: 1   MTPANLATQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG 60
           MTP+N+A+QFGDTTYTKVFVGGLAWET KDTMK YFEQFGDILEAVVITDKATGRSKGYG
Sbjct: 1   MTPSNMASQFGDTTYTKVFVGGLAWETQKDTMKNYFEQFGDILEAVVITDKATGRSKGYG 60

Query: 61  FVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGRN 120
           FVTFREP+AAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGRN
Sbjct: 61  FVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGRN 120

Query: 121 FRVLSSFQSGFGGNVGSAFHSAATFPHYAVQQGIPYNLYGYSSYSPDYTYPTSYYNVYGG 180
           FRVLSSFQ+GFGGNVGSAFHS  TFPHYA+ QGIPYNLYGYSSYSPDY YPTSYYNVYGG
Sbjct: 121 FRVLSSFQTGFGGNVGSAFHSTPTFPHYAIHQGIPYNLYGYSSYSPDYAYPTSYYNVYGG 180

Query: 181 ATAQYPMYGTGPGGIMNGAAAAAAAFYPYFQFGEGSGGGGGNGFTAGSGQQGGYGVQYPH 240
           ATAQYPMYGTGPGGI++GAAAAAAAFYPYFQFGEGSGGG  NGFT GSGQQG YGVQYPH
Sbjct: 181 ATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGGGA-NGFTGGSGQQG-YGVQYPH 240

Query: 241 HLFQYSAAINSSATSFPQHYAAPPMSLPPTPPTLPSG 277
           HL QYSAA+NS+ T+FPQHYAAPPMSLPPTPPTLPSG
Sbjct: 241 HLLQYSAALNSTPTTFPQHYAAPPMSLPPTPPTLPSG 275

[Close]

BLAST of MC11g1330 vs. TAIR 10
Match: AT1G33470.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 255.4 bits (651), Expect = 5.4e-68
Identity = 154/267 (57.68%), Postives = 184/267 (68.91%), Query Frame = 0


Query: 12  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAM 71
           DTT+TKVFVGGLAWETHK +++ YFEQFGDI+EAVVITDK++GRSKGYGFVTF +PEAA 
Sbjct: 3   DTTFTKVFVGGLAWETHKVSLRNYFEQFGDIVEAVVITDKSSGRSKGYGFVTFCDPEAAQ 62

Query: 72  RACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGRNFRVLSSFQSGF 131
           +ACVD APVIDGRRANCNLA+ GVQRSKPS+P H        G  GGR  +V S F++ F
Sbjct: 63  KACVDPAPVIDGRRANCNLAAFGVQRSKPSSPIH--------GHVGGRGMKVTSPFKTHF 122

Query: 132 GGNVGSAFHSAATFPHYAVQQGIPY-NLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGT 191
            G   +A  S   F HY     +PY N +G+SSYS DY YPTSYYNVYGGATAQ+PMYG+
Sbjct: 123 -GTAATAIPSPLPFSHYT----LPYTNPFGFSSYSMDYNYPTSYYNVYGGATAQHPMYGS 182

Query: 192 GPGGIMNGAAAA-AAAFYPYFQFGEGSGGGGGNGFTAGSGQQGGYGVQYPHHLFQYSAAI 251
           GP   M G AAA AA FYPY QF EG+G   G              + YP+H+F YSA  
Sbjct: 183 GP---MTGVAAAPAAGFYPYLQFAEGNGPVTGYA-----------PLHYPNHMFHYSA-- 236

Query: 252 NSSATSFPQHYAAPPMSLPPTPPTLPS 277
                ++P H+   P+SL P+ P +PS
Sbjct: 243 --PGGNYP-HHNGSPVSLAPS-PVIPS 236

[Close]

BLAST of MC11g1330 vs. TAIR 10
Match: AT1G33470.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 250.8 bits (639), Expect = 1.3e-66
Identity = 154/268 (57.46%), Postives = 184/268 (68.66%), Query Frame = 0


Query: 12  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAM 71
           DTT+TKVFVGGLAWETHK +++ YFEQFGDI+EAVVITDK++GRSKGYGFVTF +PEAA 
Sbjct: 3   DTTFTKVFVGGLAWETHKVSLRNYFEQFGDIVEAVVITDKSSGRSKGYGFVTFCDPEAAQ 62

Query: 72  RACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGRNFRVLSSFQSGF 131
           +ACVD APVIDGRRANCNLA+ GVQRSKPS+P H        G  GGR  +V S F++ F
Sbjct: 63  KACVDPAPVIDGRRANCNLAAFGVQRSKPSSPIH--------GHVGGRGMKVTSPFKTHF 122

Query: 132 GGNVGSAFHSAATFPHYAVQQGIPY-NLYGYSSYSPDYTYPT-SYYNVYGGATAQYPMYG 191
            G   +A  S   F HY     +PY N +G+SSYS DY YPT SYYNVYGGATAQ+PMYG
Sbjct: 123 -GTAATAIPSPLPFSHYT----LPYTNPFGFSSYSMDYNYPTQSYYNVYGGATAQHPMYG 182

Query: 192 TGPGGIMNGAAAA-AAAFYPYFQFGEGSGGGGGNGFTAGSGQQGGYGVQYPHHLFQYSAA 251
           +GP   M G AAA AA FYPY QF EG+G   G              + YP+H+F YSA 
Sbjct: 183 SGP---MTGVAAAPAAGFYPYLQFAEGNGPVTGYA-----------PLHYPNHMFHYSA- 237

Query: 252 INSSATSFPQHYAAPPMSLPPTPPTLPS 277
                 ++P H+   P+SL P+ P +PS
Sbjct: 243 ---PGGNYP-HHNGSPVSLAPS-PVIPS 237

[Close]

BLAST of MC11g1330 vs. TAIR 10
Match: AT1G22910.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 227.3 bits (578), Expect = 1.6e-59
Identity = 147/264 (55.68%), Postives = 169/264 (64.02%), Query Frame = 0


Query: 11  GDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAA 70
           GDTTYTKVFVGGLAWETHK+TMKK+FEQFG+ILEAVVITDKA+GRSKGYGFVTFRE EAA
Sbjct: 8   GDTTYTKVFVGGLAWETHKETMKKHFEQFGEILEAVVITDKASGRSKGYGFVTFREAEAA 67

Query: 71  MRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGR--NFRV-LSSF 130
             ACVDA PVIDGRRANCNLASLG+QRSKPSTP H         GGGGR  N RV +S+ 
Sbjct: 68  RSACVDATPVIDGRRANCNLASLGLQRSKPSTPNH---------GGGGRINNMRVMMSTM 127

Query: 131 QSGFGGNVGSAFHSAATFPHYAVQQGIPYNLYGYSSYSPDY-TYPTSYYNVYGGAT-AQY 190
           Q+GFG           TF HY     +P NL+GYS YSPDY ++PT+ Y +YG  +  QY
Sbjct: 128 QTGFGPPPPP---QPPTFTHY---PHLPLNLFGYSPYSPDYSSFPTNLYGMYGCTSGGQY 187

Query: 191 PMYG--TGPGGIMNGAAAAAAAFYPYFQFGEGSGGGGGNGFTAGSGQQGGYGVQYPHHLF 250
            +YG     GG +  AAA+A  FYP          GGG+G    S  Q  Y     HHL 
Sbjct: 188 GVYGNRNSGGGGLTAAAASATPFYPC---------GGGHGGVQFSQPQPFY-----HHLS 232

Query: 251 QYSAAINSSATSFPQHYAAPPMSL 268
            Y+          P HY+ P  S+
Sbjct: 248 SYN----------PHHYSPPTFSM 232

[Close]

BLAST of MC11g1330 vs. TAIR 10
Match: AT1G22910.3 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 227.3 bits (578), Expect = 1.6e-59
Identity = 147/264 (55.68%), Postives = 169/264 (64.02%), Query Frame = 0


Query: 11  GDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAA 70
           GDTTYTKVFVGGLAWETHK+TMKK+FEQFG+ILEAVVITDKA+GRSKGYGFVTFRE EAA
Sbjct: 8   GDTTYTKVFVGGLAWETHKETMKKHFEQFGEILEAVVITDKASGRSKGYGFVTFREAEAA 67

Query: 71  MRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGR--NFRV-LSSF 130
             ACVDA PVIDGRRANCNLASLG+QRSKPSTP H         GGGGR  N RV +S+ 
Sbjct: 68  RSACVDATPVIDGRRANCNLASLGLQRSKPSTPNH---------GGGGRINNMRVMMSTM 127

Query: 131 QSGFGGNVGSAFHSAATFPHYAVQQGIPYNLYGYSSYSPDY-TYPTSYYNVYGGAT-AQY 190
           Q+GFG           TF HY     +P NL+GYS YSPDY ++PT+ Y +YG  +  QY
Sbjct: 128 QTGFGPPPPP---QPPTFTHY---PHLPLNLFGYSPYSPDYSSFPTNLYGMYGCTSGGQY 187

Query: 191 PMYG--TGPGGIMNGAAAAAAAFYPYFQFGEGSGGGGGNGFTAGSGQQGGYGVQYPHHLF 250
            +YG     GG +  AAA+A  FYP          GGG+G    S  Q  Y     HHL 
Sbjct: 188 GVYGNRNSGGGGLTAAAASATPFYPC---------GGGHGGVQFSQPQPFY-----HHLS 232

Query: 251 QYSAAINSSATSFPQHYAAPPMSL 268
            Y+          P HY+ P  S+
Sbjct: 248 SYN----------PHHYSPPTFSM 232

[Close]

BLAST of MC11g1330 vs. TAIR 10
Match: AT1G22910.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 225.7 bits (574), Expect = 4.5e-59
Identity = 151/279 (54.12%), Postives = 174/279 (62.37%), Query Frame = 0


Query: 11  GDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAA 70
           GDTTYTKVFVGGLAWETHK+TMKK+FEQFG+ILEAVVITDKA+GRSKGYGFVTFRE EAA
Sbjct: 8   GDTTYTKVFVGGLAWETHKETMKKHFEQFGEILEAVVITDKASGRSKGYGFVTFREAEAA 67

Query: 71  MRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGR--NFRV-LSSF 130
             ACVDA PVIDGRRANCNLASLG+QRSKPSTP H         GGGGR  N RV +S+ 
Sbjct: 68  RSACVDATPVIDGRRANCNLASLGLQRSKPSTPNH---------GGGGRINNMRVMMSTM 127

Query: 131 QSGFGGNVGSAFHSAATFPHYAVQQGIPYNLYGYSSYSPDY-TYPTSYYNVYGGAT-AQY 190
           Q+GFG           TF HY     +P NL+GYS YSPDY ++PT+ Y +YG  +  QY
Sbjct: 128 QTGFGPPPPP---QPPTFTHY---PHLPLNLFGYSPYSPDYSSFPTNLYGMYGCTSGGQY 187

Query: 191 PMYG--TGPGGIMNGAAAAAAAFYPYFQFGEGSGGGGGNGFTAGSGQQGGYGVQYPHHLF 250
            +YG     GG +  AAA+A  FYP          GGG+G    S  Q  Y     HHL 
Sbjct: 188 GVYGNRNSGGGGLTAAAASATPFYPC---------GGGHGGVQFSQPQPFY-----HHLS 247

Query: 251 QYSAAINSSATSFPQHYAAPPMSL-------PPTPPTLP 276
            Y+          P HY+ P  S+       P  PP +P
Sbjct: 248 SYN----------PHHYSPPTFSMQQGVTGFPLQPPLIP 247

The following BLAST results are available for this feature:

BLAST of MC11g1330 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M1S3	1.2e-24	37.32	Probable RNA-binding protein ARP1 OS=Arabidopsis thaliana OX=3702 GN=ARP1 PE=2 S...	[more]
Q76LC6	3.5e-24	62.35	RNA-binding protein 24 OS=Danio rerio OX=7955 GN=rbm24 PE=2 SV=1	[more]
Q9I8B3	3.0e-23	39.27	RNA-binding protein 24-B OS=Xenopus laevis OX=8355 GN=rbm24-b PE=2 SV=1	[more]
Q5ZJX4	1.5e-22	39.81	RNA-binding protein 38 OS=Gallus gallus OX=9031 GN=RBM38 PE=2 SV=1	[more]
Q6P8A7	1.6e-21	37.61	RNA-binding protein 24 OS=Xenopus tropicalis OX=8364 GN=rbm24 PE=2 SV=1	[more]

BLAST of MC11g1330 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022157230.1	1.36e-199	100.00	RNA-binding protein 24 isoform X1 [Momordica charantia]	[more]
XP_022157231.1	9.26e-199	100.00	RNA-binding protein 24 isoform X2 [Momordica charantia]	[more]
XP_022157232.1	8.18e-190	97.11	RNA-binding protein 24 isoform X3 [Momordica charantia]	[more]
XP_022157233.1	5.59e-189	97.10	RNA-binding protein 24 isoform X4 [Momordica charantia]	[more]
XP_022930178.1	8.59e-182	91.70	RNA-binding protein 38 isoform X1 [Cucurbita moschata] >XP_022974074.1 RNA-bindi...	[more]

BLAST of MC11g1330 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DSJ0	6.57e-200	100.00	RNA-binding protein 24 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111023991...	[more]
A0A6J1DXD0	4.49e-199	100.00	RNA-binding protein 24 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111023991...	[more]
A0A6J1DU09	3.96e-190	97.11	RNA-binding protein 24 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111023991...	[more]
A0A6J1DSU9	2.71e-189	97.10	RNA-binding protein 24 isoform X4 OS=Momordica charantia OX=3673 GN=LOC111023991...	[more]
A0A6J1IGG9	4.16e-182	91.70	RNA-binding protein 38 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111472695 PE...	[more]

BLAST of MC11g1330 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G33470.2	5.4e-68	57.68	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G33470.1	1.3e-66	57.46	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G22910.2	1.6e-59	55.68	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G22910.3	1.6e-59	55.68	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G22910.1	4.5e-59	54.12	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 17..89 e-value: 6.9E-22 score: 88.7
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 18..73 e-value: 1.2E-15 score: 57.1
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 16..100 score: 16.687742
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 3..110 e-value: 1.9E-23 score: 84.9
IPR037366	BOULE/DAZ family	PANTHER	PTHR11176	BOULE-RELATED	coord: 1..273
None	No IPR available	PANTHER	PTHR11176:SF16	OS01G0876800 PROTEIN	coord: 1..273
None	No IPR available	CDD	cd12384	RRM_RBM24_RBM38_like	coord: 16..91 e-value: 3.39957E-41 score: 135.05
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 15..109

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC11g1330.1	MC11g1330.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030154	cell differentiation
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003676	nucleic acid binding