MC11g1301 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC11g1301
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Ankyrin repeat-containing protein
Location	MC11: 15600116 .. 15600411 (-)
RNA-Seq Expression	MC11g1301
Synteny	MC11g1301

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATACCTCATGAGCTATACACGAAAGAATACAAGAAGCTATTAAAGAATGGAGAAAATAGGATGAAGCAAGTGGCACAAACATGCATGCAAGCAGCATCGATGATTGCTGTAGGGTTTTTGTAGCAATTTTTATGTTACCCAAAGGTATCGATCAAGAAAGATACACTCATAATTTGCAAAACGACCCTATGTTCGTGCTACTTGTAGCATCAAATTCATATGCATTTGCATCTTCTTTAACATCTCAATTCTTCTTTATATCCATCATCACATCATACTCCACTGAAGAAAATTTC

mRNA sequence

ATACCTCATGAGCTATACACGAAAGAATACAAGAAGCTATTAAAGAATGGAGAAAATAGGATGAAGCAAGTGGCACAAACATGCATGCAAGCAGCATCGATGATTGCTGTAGTTTTTGTAGCAATTTTTATGTTACCCAAAGGTATCGATCAAGAAAGATACACTCATAATTTGCAAAACGACCCTATGTTCGTGCTACTTGTAGCATCAAATTCATATGCATTTGCATCTTCTTTAACATCTCAATTCTTCTTTATATCCATCATCACATCATACTCCACTGAAGAAAATTTC

Coding sequence (CDS)

ATACCTCATGAGCTATACACGAAAGAATACAAGAAGCTATTAAAGAATGGAGAAAATAGGATGAAGCAAGTGGCACAAACATGCATGCAAGCAGCATCGATGATTGCTGTAGTTTTTGTAGCAATTTTTATGTTACCCAAAGGTATCGATCAAGAAAGATACACTCATAATTTGCAAAACGACCCTATGTTCGTGCTACTTGTAGCATCAAATTCATATGCATTTGCATCTTCTTTAACATCTCAATTCTTCTTTATATCCATCATCACATCATACTCCACTGAAGAAAATTTC

Protein sequence

IPHELYTKEYKKLLKNGENRMKQVAQTCMQAASMIAVVFVAIFMLPKGIDQERYTHNLQNDPMFVLLVASNSYAFASSLTSQFFFISIITSYSTEENF

Homology

[Close]

BLAST of MC11g1301 vs. NCBI nr
Match: XP_011652537.2 (ankyrin repeat-containing protein At5g02620-like [Cucumis sativus] >KGN64491.2 hypothetical protein Csa_013671 [Cucumis sativus])

HSP 1 Score: 78.6 bits (192), Expect = 2.01e-14
Identity = 46/98 (46.94%), Postives = 60/98 (61.22%), Query Frame = 0


Query: 2   PHELYTKEYKKLLKNGENRMKQVAQTCMQAASMIA-VVFVAIFMLPKGIDQERYTHNLQN 61
           P EL+TKE+K LLK GE  MK  A +CM  A++IA VVF A F +P G D +  T N + 
Sbjct: 546 PRELFTKEHKNLLKAGEEWMKNTANSCMLVATLIATVVFAAAFTVPGGNDDKSGTPNFRQ 605

Query: 62  DPMFVLLVASNSYAFASSLTSQFFFISIITSYSTEENF 98
           +P F + V S+  A   S TS   F+SI+TS   EE+F
Sbjct: 606 NPAFTVFVISDVVALVLSTTSILTFLSILTSRYAEEDF 643

[Close]

BLAST of MC11g1301 vs. NCBI nr
Match: XP_011652525.2 (ankyrin repeat-containing protein At5g02620-like [Cucumis sativus] >KAE8652649.1 hypothetical protein Csa_013274 [Cucumis sativus])

HSP 1 Score: 78.2 bits (191), Expect = 2.74e-14
Identity = 46/98 (46.94%), Postives = 60/98 (61.22%), Query Frame = 0


Query: 2   PHELYTKEYKKLLKNGENRMKQVAQTCMQAASMIA-VVFVAIFMLPKGIDQERYTHNLQN 61
           P EL+TKE+K LLK GE  MK  A +CM  A++IA VVF A F +P G D +  T N + 
Sbjct: 546 PRELFTKEHKNLLKAGEEWMKNTANSCMLVATLIATVVFAAAFTVPGGNDDKSGTPNFRQ 605

Query: 62  DPMFVLLVASNSYAFASSLTSQFFFISIITSYSTEENF 98
           +P F + V S+  A   S TS   F+SI+TS   EE+F
Sbjct: 606 NPAFTVFVISDVAALVLSTTSILTFLSILTSRYAEEDF 643

[Close]

BLAST of MC11g1301 vs. NCBI nr
Match: KAG8373953.1 (hypothetical protein BUALT_Bualt11G0079400 [Buddleja alternifolia])

HSP 1 Score: 76.3 bits (186), Expect = 8.29e-14
Identity = 40/98 (40.82%), Postives = 63/98 (64.29%), Query Frame = 0


Query: 2   PHELYTKEYKKLLKNGENRMKQVAQTCMQAASMIA-VVFVAIFMLPKGIDQERYTHNLQN 61
           P+EL+ +E+K L+K GE +MKQ A++CM    +IA +VF   F +P G +    T  L+N
Sbjct: 173 PYELFLEEHKDLMKQGEKQMKQTAKSCMLVTMLIATIVFTTAFTVPGGYNNTNGTPILEN 232

Query: 62  DPMFVLLVASNSYAFASSLTSQFFFISIITSYSTEENF 98
           + +F++   + + A  SSLTS F F+SI+TS  +E +F
Sbjct: 233 NKLFIVFPIAEAIATLSSLTSMFMFLSILTSRYSENDF 270

[Close]

BLAST of MC11g1301 vs. NCBI nr
Match: XP_019418119.1 (PREDICTED: protein ACCELERATED CELL DEATH 6-like [Lupinus angustifolius])

HSP 1 Score: 75.5 bits (184), Expect = 2.39e-13
Identity = 41/98 (41.84%), Postives = 63/98 (64.29%), Query Frame = 0


Query: 2   PHELYTKEYKKLLKNGENRMKQVAQTCMQAASMIAV-VFVAIFMLPKGIDQERYTHNLQN 61
           P +++TKE+++LLKNGE+ MK+ A +CM  +++IA  VF A F +P G +    + N   
Sbjct: 400 PRQIFTKEHEELLKNGESWMKRTANSCMVVSTLIATGVFSAAFSVPGGNNDNTRSPNYME 459

Query: 62  DPMFVLLVASNSYAFASSLTSQFFFISIITSYSTEENF 98
            P F++ V S++ AF SS TS   F+SI+ S   E+NF
Sbjct: 460 KPAFLVFVLSDAIAFISSSTSIIIFLSILMSRYAEDNF 497

[Close]

BLAST of MC11g1301 vs. NCBI nr
Match: KAE9594296.1 (putative ankyrin repeat-containing domain, PGG domain-containing protein [Lupinus albus])

HSP 1 Score: 74.7 bits (182), Expect = 4.47e-13
Identity = 41/98 (41.84%), Postives = 63/98 (64.29%), Query Frame = 0


Query: 2   PHELYTKEYKKLLKNGENRMKQVAQTCMQAASMIAV-VFVAIFMLPKGIDQERYTHNLQN 61
           P +++TKE+++LLKNGE+ MK+ A +CM  +++IA  VF A F +P G +    + N   
Sbjct: 440 PRQIFTKEHEELLKNGESWMKRTANSCMVVSTLIATGVFSAAFSVPGGNNDNTRSPNYME 499

Query: 62  DPMFVLLVASNSYAFASSLTSQFFFISIITSYSTEENF 98
            P F++ V S++ AF SS TS   F+SI+ S   EE+F
Sbjct: 500 KPAFLVFVLSDAIAFISSSTSIIIFLSILMSRYAEEDF 537

[Close]

BLAST of MC11g1301 vs. ExPASy TrEMBL
Match: A0A5B7BND9 (PGG domain-containing protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_039309 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 1.69e-13
Identity = 43/98 (43.88%), Postives = 61/98 (62.24%), Query Frame = 0


Query: 2   PHELYTKEYKKLLKNGENRMKQVAQTCMQAASMIA-VVFVAIFMLPKGIDQERYTHNLQN 61
           P +L+TKE+++LLK+GE  MK  A +CM  A++IA VVF A F +P G + E  T     
Sbjct: 24  PRDLFTKEHEQLLKDGEKWMKDTATSCMLVATLIATVVFAAAFTVPGGNNNETGTPMFLK 83

Query: 62  DPMFVLLVASNSYAFASSLTSQFFFISIITSYSTEENF 98
           +  FV+ V S++ A  SS TS   F+SI+TS   E +F
Sbjct: 84  EKWFVVFVVSDAIALFSSTTSIVMFLSILTSRYAENDF 121

[Close]

BLAST of MC11g1301 vs. ExPASy TrEMBL
Match: A0A6A4NKY0 (Putative ankyrin repeat-containing domain, PGG domain-containing protein OS=Lupinus albus OX=3870 GN=Lalb_Chr18g0052281 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 2.17e-13
Identity = 41/98 (41.84%), Postives = 63/98 (64.29%), Query Frame = 0


Query: 2   PHELYTKEYKKLLKNGENRMKQVAQTCMQAASMIAV-VFVAIFMLPKGIDQERYTHNLQN 61
           P +++TKE+++LLKNGE+ MK+ A +CM  +++IA  VF A F +P G +    + N   
Sbjct: 440 PRQIFTKEHEELLKNGESWMKRTANSCMVVSTLIATGVFSAAFSVPGGNNDNTRSPNYME 499

Query: 62  DPMFVLLVASNSYAFASSLTSQFFFISIITSYSTEENF 98
            P F++ V S++ AF SS TS   F+SI+ S   EE+F
Sbjct: 500 KPAFLVFVLSDAIAFISSSTSIIIFLSILMSRYAEEDF 537

[Close]

BLAST of MC11g1301 vs. ExPASy TrEMBL
Match: A0A6A5P1N1 (ANK_REP_REGION domain-containing protein OS=Lupinus albus OX=3870 GN=Lal_00001387 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 2.17e-13
Identity = 41/98 (41.84%), Postives = 63/98 (64.29%), Query Frame = 0


Query: 2   PHELYTKEYKKLLKNGENRMKQVAQTCMQAASMIAV-VFVAIFMLPKGIDQERYTHNLQN 61
           P +++TKE+++LLKNGE+ MK+ A +CM  +++IA  VF A F +P G +    + N   
Sbjct: 445 PRQIFTKEHEELLKNGESWMKRTANSCMVVSTLIATGVFSAAFSVPGGNNDNTRSPNYME 504

Query: 62  DPMFVLLVASNSYAFASSLTSQFFFISIITSYSTEENF 98
            P F++ V S++ AF SS TS   F+SI+ S   EE+F
Sbjct: 505 KPAFLVFVLSDAIAFISSSTSIIIFLSILMSRYAEEDF 542

[Close]

BLAST of MC11g1301 vs. ExPASy TrEMBL
Match: A0A6I9UQE1 (ankyrin repeat-containing protein At5g02620 isoform X1 OS=Sesamum indicum OX=4182 GN=LOC105175951 PE=4 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 4.02e-13
Identity = 41/98 (41.84%), Postives = 61/98 (62.24%), Query Frame = 0


Query: 2   PHELYTKEYKKLLKNGENRMKQVAQTCMQAASMIA-VVFVAIFMLPKGIDQERYTHNLQN 61
           P++++ +E++KL+K GE  MKQ A++CM    +IA VVF   F +P G +       LQN
Sbjct: 404 PYDIFLEEHEKLMKEGEKLMKQTAKSCMLVTMLIATVVFTTAFTVPGGYNNNTGAPILQN 463

Query: 62  DPMFVLLVASNSYAFASSLTSQFFFISIITSYSTEENF 98
           D +F++   S + A  SSLTS   F+SI+TS  TE +F
Sbjct: 464 DKVFMVFPISEAVATLSSLTSMLMFLSILTSRYTEMDF 501

[Close]

BLAST of MC11g1301 vs. ExPASy TrEMBL
Match: A0A5A7UP28 (Ankyrin repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold80G002410 PE=4 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 4.07e-13
Identity = 43/98 (43.88%), Postives = 60/98 (61.22%), Query Frame = 0


Query: 2   PHELYTKEYKKLLKNGENRMKQVAQTCMQAASMIA-VVFVAIFMLPKGIDQERYTHNLQN 61
           P EL+TKE+K LLK+GE  MK  A +CM  A++IA VVF A F +P G D +  T N + 
Sbjct: 516 PRELFTKEHKSLLKDGEEWMKNTANSCMLVATLIATVVFAAAFTVPGGNDDKSGTPNFRQ 575

Query: 62  DPMFVLLVASNSYAFASSLTSQFFFISIITSYSTEENF 98
           +  F + V ++  A   S TS   F+SI+TS   E++F
Sbjct: 576 NQAFTVFVITDVAALVFSTTSILTFLSILTSRYAEDDF 613

[Close]

BLAST of MC11g1301 vs. TAIR 10
Match: AT5G35810.1 (Ankyrin repeat family protein )

HSP 1 Score: 60.8 bits (146), Expect = 6.8e-10
Identity = 40/104 (38.46%), Postives = 58/104 (55.77%), Query Frame = 0


Query: 1   IPHELYTKEYKKLLKNGENRMKQVAQTCMQAASMIA-VVFVAIFMLPKGIDQERYTHNL- 60
           + H+L+TKE+  L K GE  MK+ A  C+  +++IA VVF A F LP G D       L 
Sbjct: 157 VAHDLFTKEHDNLRKEGEKWMKETATACILVSTLIATVVFAAAFTLPGGNDTSGDIKTLG 216

Query: 61  ----QNDPMFVLLVASNSYAFASSLTSQFFFISIITSYSTEENF 99
               + +  F + + S+S A  SS+TS   F+SI+TS   E +F
Sbjct: 217 FPTFRKEFWFEVFIISDSVALLSSVTSIMIFLSILTSRYAEASF 260

[Close]

BLAST of MC11g1301 vs. TAIR 10
Match: AT3G54070.1 (Ankyrin repeat family protein )

HSP 1 Score: 57.4 bits (137), Expect = 7.6e-09
Identity = 38/105 (36.19%), Postives = 56/105 (53.33%), Query Frame = 0


Query: 1   IPHELYTKEYKKLLKNGENRMKQVAQTCMQAASMIA-VVFVAIFMLPKGIDQERYTHNLQ 60
           + H+++T++++ L K GE  MK+ A  CM  A++IA VVF A   +P G D      N  
Sbjct: 381 LAHDIFTEQHENLRKEGERWMKETATACMLGATLIATVVFAAAITIPGGNDDSGDKANTL 440

Query: 61  NDP------MFVLLVASNSYAFASSLTSQFFFISIITSYSTEENF 99
             P      +F +   S+S A  SS+ S   F+SI TS   EE+F
Sbjct: 441 GFPNFRKRLLFDIFTLSDSVALFSSMMSIVIFLSIFTSRYAEEDF 485

The following BLAST results are available for this feature:

BLAST of MC11g1301 vs.


Match Name	E-value	Identity	Description

BLAST of MC11g1301 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011652537.2	2.01e-14	46.94	ankyrin repeat-containing protein At5g02620-like [Cucumis sativus] >KGN64491.2 h...	[more]
XP_011652525.2	2.74e-14	46.94	ankyrin repeat-containing protein At5g02620-like [Cucumis sativus] >KAE8652649.1...	[more]
KAG8373953.1	8.29e-14	40.82	hypothetical protein BUALT_Bualt11G0079400 [Buddleja alternifolia]	[more]
XP_019418119.1	2.39e-13	41.84	PREDICTED: protein ACCELERATED CELL DEATH 6-like [Lupinus angustifolius]	[more]
KAE9594296.1	4.47e-13	41.84	putative ankyrin repeat-containing domain, PGG domain-containing protein [Lupinu...	[more]

BLAST of MC11g1301 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5B7BND9	1.69e-13	43.88	PGG domain-containing protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_...	[more]
A0A6A4NKY0	2.17e-13	41.84	Putative ankyrin repeat-containing domain, PGG domain-containing protein OS=Lupi...	[more]
A0A6A5P1N1	2.17e-13	41.84	ANK_REP_REGION domain-containing protein OS=Lupinus albus OX=3870 GN=Lal_0000138...	[more]
A0A6I9UQE1	4.02e-13	41.84	ankyrin repeat-containing protein At5g02620 isoform X1 OS=Sesamum indicum OX=418...	[more]
A0A5A7UP28	4.07e-13	43.88	Ankyrin repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]

BLAST of MC11g1301 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G35810.1	6.8e-10	38.46	Ankyrin repeat family protein	[more]
AT3G54070.1	7.6e-09	36.19	Ankyrin repeat family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR026961	PGG domain	PFAM	PF13962	PGG	coord: 19..91 e-value: 3.3E-8 score: 33.3

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC11g1301.1	MC11g1301.1	mRNA