MC11g1146 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC11g1146
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	RAB GTPASE HOMOLOG B18
Location	MC11: 9929989 .. 9938575 (-)
RNA-Seq Expression	MC11g1146
Synteny	MC11g1146

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5polypeptideCDSutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCAAATCGTCGGCACATTTTTCAAAAAAAAAATTGGAAGAACAAAGAATCGGTGGGAAGAAGCAAAAAAGTTCAGTTCATGCCTTCTTTTTCCTTTGAATTGAACGAATATTTTCCAACTTTCCTTTCCCTCTCTACTCTGTGAGTATTCAGTTTCTGCTTTGCTTTTACTTTTGTTCTTCGTTTTGTTGATCGCAAATTGCTTGAAACTGAACTCTGGTCTCGTTGATGGTGGTTGCTTAAGGTGCTTCTTGTATTTCCGATGTCGTCCGCTCCGTCTTCGAGTCAGCCGGAGTTTGATTACTTGTTCAAGTTGCTGTTGATTGGGGACTCTGGAGTAGGGAAGAGTACGCTTCTTTTGCGCTTCACGTCTGATTCCTTTGAGGATCTTTCTCCCACTATTGGTATGATTCTGATTTACTAATGCCTATGCGATTTTGTTGTTGGAATCTGTCTCTGATGTTTTTGTTCAAGGTGTTCTGTCTTTAAGCTTCGAAGAACCGGGTTGTGGTTTGTTAAATTTCACAATTGAAAATACTGATAACAATTTTGTTTCTAGTGTTCTATTTATAAGAGTTAAGTTTGTTTGCTAATAATTCTGTTGTTTATCTCTTTTTTACTTTTTAAAAATACTTTCAAAATCGTAGTTCTTTTTCTTTTTCTTTTTTCTTTGACAATTACTTTTTTCTAATTTTTATAATTTGGCTTGTATTTGAAAACAGTTTACGAGATGGAGGAAGTTCTTAGTAAACAAGATTTTGAAAAAGTGGATAAATTAAAATTAGAATCATTAGCAAACAGATCCTATATTTACAGTCATTGGATTGGATTGCTGACCCCCTTCTTGTTGAAACCTCCCTACATTTGACCCTTGAGCATCTTAGTGAAGGATTCTTAGGAATAAGAGAATGTATGCTGGGTTGGTAATTAGAAAAACCTCCTTGGTAGGGAGCTGACTGATTGGAATTCTTTAGTGGGGAGTCTTGATTTTTCATTTATTGAGCGCAGTGATTGCAGATTATGGAAGCTCAATCTTGGGGACATTTCAAGCTAAAATCTTTTTAACTACTTGTTCTGATGGGTTCCTGTTTTAAATGAGGCATTTTATAAGATGTTGTGTAAATTATAGGTCTCTATAAAGTGTAAAAGAATTGTCCAATCCGAGAATAGCTCAGTGGATAAGACACCTATTATGATAAATGGGATGGTTCAATCTCCCACCCCACAATTGTTGAACTCTGGAAAAAAAAGTATGAAGATTTTTCATGGACTCCCACTTTTGGTAGCCCTAACAACAAAGTTCAAAAGAGAAATCTAAACTTCGCCCTCAGTCGACTCTGGTGTGTATGAGTAATAGCAAGTGAGGAAGACTTCAATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTTCTTTTTTTTTTCTTTTTTTTTTTTTTTGCTCTGGGGTGGCATCTTAACACATTCCTTGAGACTTTTGTATGCTATTTTCCTTCCAACAAGTGCCATAGATTAAATTATCCAAGGGGCAATCGTGGTTGGAACTGGAAGGCATGTATAAGCAACAGATATGGGTTAATGTCTTCATTGCAATCTGTTGTGAGTCAAATGCACCCTGAAAGTCTCCAGCAAACTGCCTCAAATTGAATCTACAAGTTGACAACTCCATGAAACATGGTCCATATAATTAGAAGCACCCTTGGATAAGATGGGCCACTGAAGCCCCAGTAGAAAAGAAGATGACCTCAGGATGAGGTTGATAGTATTAGTCCTCTTGTGTTAGACCTACCAGTCAAAAACTTTCACCTCCTTGAGACTTTAACCTAAGCGAGGAAAGCAAAGATGGTGCGAAGAGATGAGAAGCGCACAAACGAGAATAAAAGGAAATATAGGAAAACTCCCTTGGAGGATTAGGGGCTGAGAGACTAATATCCTAGCCCGAGGGTGAAAATAGAAGCCAACCAACAGAGAAAGCCAAGAAGAAACATTAAAAGCTTTCCTATTAGACAAAGGATGCTCAAAATTGGACAAAAGAGGACAAAAGCCACAAAGGCATATTTCAATGATGAGAGGTGATAAAACGATGATAAATATGGCAAAGGGGATATCCCCCACCCTCCAATCCTCCCTAACAATGAAGAATCCTTTTTCATTTCCTTTGGTATTCGATTCAATATATTTCATTTACATCTATGAAACAGTCTCATTTCTAATAAAATATATATATATTACGATCTACCACTCATCTTTTGTATATTAATTTTCTAATTATTCTCTAAATTTTTAGGTGTGGATTTCAAGATTAAGCATGTGACAGTTGGGGGCAAAAAGTTGAAACTTGCAATATGGGACACAGGTAAAATCTTGCTGTTGTGTTTCATGTATGTGCAAGTGTATAAACATGAGAGGGGAAAGGTAATGGTGCCATATGATTTGTTTCTGTCCTCTTTTGGATTTTCTCATCGTGTTATTATTCTGTATTTTAAATTTTAAATTTCCATATTCTTAATTTGAATGTTAGATATGCATCTAACATATTTTTTAAGGTTACTAAAGTATGTGTCCGTTATTTATACTATAAAATCTTTATGCTAAATCTTGGGAGTACCCTGGTCCCTGCATGCAAAATTGCACTAATTTCATTGATCATCTTATTACAAAATATTGCCATTGGAACTGTAAGTTCTATGATTTCAGTAGATAAGGGGGTGGATTAACATATACCTACTTATCTTAAGTTCATAACTTTGTATATTTGGCAGTCTCATGCTTTTAAAATTGCACTAGTCATCTTATGATATGATAATATTGTTGGAAATTCTTAGGAACAAATAAAGGATGTCATAGAAAAATCGGTTTTGCAATCAAGGAGAAAAACACCAATGGCACCAAAAACCAGAGGCAGAAAACAAAATCCATGGCATAGTAGGGCTGAATTTCAGTTTCTTCATAATGCTACTTGGGCTTATTGCGATATCTTCTGAAAATAATAATAATAATAATAATAATTTAGGTCTAAGCTAATCAGCTAAGACATCAAGTATGTTGCATTCTATTTATTGTAGTGTAAGTGTGCAACTTGGAAGTGTTATCCTATGATGAAATTGATTATGTAAGCACATCTTCCATACCTTTACTTGAATAGAAGTACAAACCTTCATTGTCTCTACCTTCCTTTATTTAAGTATATTTAAATGTTCTCTACTTGCAGCTGGGCAGGAGAGGTTTCGTACACTAACAGGTTCATATTACAGGGGAGCTCAAGGGATCATTATGGGTATCTTCTATTGATTTCATCACTTTCTATCTACAATTTAAATAATAGCATGTTAACATTGCTACACTCGTGAAATCTTCAATTTCTCATTCAGTTCCCTTTTGATGCTGTTGTTTTTTGTCTTAGAAGAGAGGAAAGTTAAGAACTTCTCAACTCTCAATGCTGTTCTGGTTTTTGAGCCTCTGAAAAGCTTGGAATTTTACAAATTTACTGGAATACAAGCGGACTATTCTTTTCTTTTTCTTCTGACTTGACTATGGGATTATCAAAACTTGTGATTATAATTCTTTTTTTAGGAACATTTCAATTGACTCGGCACTAGTGTCATTCTTTTCTTTGTTGTCATAACGTTTCCAGCTGATCATTGTGTTTTGCGGTTAAAGAACCTGAGCATACAAATTTTGACATCAACTTTGGAACTTAATGCTTTTCCTTTACTTCTTGGGATGAATTGTTTAAAAAAATTGTTATGCTGATTATTTTTCCTTTTATTCATTTAGTTCTCAAGTTAACCAAATATTTGTTGCAACCTAAAACTTGTTTAGTGTATGATGTGACTCGGCGCGAGACATTCACAAATCTGTCTGACATATGGGCCAAAGAAATCGACATGTATTCTACAAATCAGGATTGCATCAAGATGCTTGTTGGAAACAAGGTGGACAAGGTATGCCTTTGACTCTTGAGGAACTTCAGCAGCAATACGCTGCACAATTTAACTATGGATGTAAGCCTGACTTTCTGGCTAATCAGTGCCATGTATAAATATGCTTCATTTATGTTCTATTGAGCTTGGTGTGCCTATGGGCTATTGGCTACTGATTTCATGATATTTCTCTTTACTAAACCAAATTATCCTTATTCTTTATGTTAGTTATCTAAATTCAAGTGATCTAATCTTTCAGGAAAGTGAAAGGGTAGTGAGTAAGAAAGAGGGAATTGACTTTGCTCGAGAATATGGATGCCTGTTTCTTGAATGCAGTGCAAAAACTCGAGTTAATGTGGAGCAGTGCTTTGACGAGCTTGTGTTGAAGGTGCGTGTAAACTTGAAACCCTCTTCTGCTTCCCAAATGACCTTACGATCAATACAAATTGTCCTTGTGCAACTACTTTATTGGGCGTGAACCCTGTATTGAGGCGCTGTTGCTCTCAAAGTTGTATTCCAAGGGTGCAATTTTTATTTTTAAGTGGTTACTAGTTTTCTATTCGATAACGAGCTTCATCATAAAGGCTTAGAATCTATGAAATACAATTTGACCCTTAAGTTTCAAAAAGTAATAATTTGATCCCCGACATTTGTAAGATGGTTCTAAAAGATCTCTGGAGTCAAACTTCCATTAGTGACACCACGGAATGCTGATGTGACGAGTCGAATTTTTATTAATTTTATATTACTTTTAAATTAAGTGGCATTCTTTCCCACTTCCTTCCATCTATTTCTCTCTAGTCTCTCCCCTCTTCTTTCCCTCTCTTCCCTCCCCCTTCTCCAGTAGCATTTTCGCTCCCTGCCTCCATCTTAGTGGTACGTAGTTTTTAGAAGAAAACTCAAAAGCAAGGGGAAATTATCAGAAGAAAATTTTCCAAAGGACTTGCCATTATATCATCCTCAACAAGTCGGAGGGGCCACATTTTCGTCATTTCCCCTCTCTCTTCTCCTCTGTGAAAATATGGAAGTTGCAGCCACTACTTCTTTCCCTCTCTCCAAGCTTCAGCAGGTACTCCTCCGGCAGGTTTGCTGAAATTGCTGCTCGTGTCATTGAGGAACTTCGGAAAGAGAACGCAACTACTTCTTTCTCTTCCTTCAGTGCAGCGCGAGGCGAATTCTTGCTCGTCGTCTGAGGCCGATGAGCTTGGCAAAGTTCTTGTTGGAGAGAGGGAGAGATGGATGTGGGAGAGAAAACATAGACTGGAGAAGGAAAAGGAGGGAAGAGAGAAAGAGAAGGGAAGTCAGAAGTGGGAAAAAAATGTCACCTAATTTCAAATTAATATAAATCAAATTCACAAATGCAACATAAGCATTCCGTTAGTGTCATTCATGAAAATTTGACTTTAGGGAAACTGTTTTCCACAAGTTGGGAAATTGTCGCTTTTTAAAACTTGGGGATCAAATAGAAACTTATCTTATTCACGACCAAAATTGTATTTTACCCAAAGGAAATAAAAAGGAGAAAATCTTAGAATCAAACCTATAACCTATTCTTCAATAATGAGATTCTTTTATTGACATGAACTCAAGCAGTATTGTGGCATGTGATTCTTGCTAGCATGATTTATAGAGATGTCTATTTGAGACTTCAAATTGTTGGTAGTATGATAGTTTTTCATATTTGTATCATCTTAAGTATACTGCCAAGTGTATGTTTAAGACACAAATGGCATTAGTATGATATGTAATTCCTTTTACTTATGGTATGCCATATTCTACCCCTTCTCTTCTTTCCATCGTTTCATTGTCACCATTGAAACAAATAATGAGTCATATGAGAACGTCTCAAGAGCTCTTCTCCAGTGGTCCTCCATAAGCTGTAATAACTACTTGTGATGTTCGACAATGTGTTTGCAGATTTTGGACACTCCCAGTCTTTTGGCTGACGGCTCAACAGGTCTGAAAAAGAACATCTTCAAAGAGAAACCTCCTCAAGCGAATGCATCACCTGGTGGCTGCTGCTCATATTGATTTTATTCTAAGAATTTCAGAAGCATCTTCATTTTGTTTTAGTTTCAACACCCCCTGAAGTCAAAAGGTTCATGCTCTTCATCTTCCCTTTTATGGATTATGACTTTTAAAGTTCGTTCAACTAGAACATCTGGCCGAGCGATTTCCTTGTACTCTTTTAGTCTTTGTTACCAGGCCGACGATTAATTGATTTATTTTGGTGTGAGTTTGATTTAACATGAACTGGAGGGGATCGTATCAATACTTCAAGTTTCAAGACCGACTTCTTTCAACTGCTCAATCTATGCACTAGCAGGTAGTAGAGCGTGTCTCGTAACTTTTTCGGCGGGACGAATTGTGTTATGCTTTACTTTTTATTTTGTAAGAAAATATGCATCTTGATTGTTCTCTCCTTACAAGTTATAGAGCAAGAAAGAATGGTGCTCCAAACAAGAAAAGGCAATTGAGTCTTGATTTAACTATTTAAGTTAATGAAAAGCATGGCGAGAAAGCAAATCTGACTCGTAAACGATCAGTTAAGTGACTGCTCAATTTCTCAATTCCTTCAATTTATCGATATAGAGAATAGTTTCTCAAGCAAGTCGATCGACCTTATAATCTTGCACCCAACACAATTTTTCTAAACTCGTGCTTCTTAGATGTCAAACCCACATCGACAAGGTGGATGTCCGAATTTGTGCTTAGACTTGGAGATTTTATTCACCGCACAAGAGAAATAGAATTAAGTTCCGAATTAATTTACATAACAACATTTGCATGATCTTAACCAATATGAGCTTTAACTCTTTTTTGGGTCAAGCTTGCATTTTCCATCAAATTTAGGCACCAAATGAACTTTGTTACAATCTAAAGAGGAACATCAGAAGGATAATCTTGAGGGTACCTCTTCATAGTTTGCCTTAGTACTTGCTCTTGTTCATGGAGGTTTGAGGGAACATTATCATACACATCACTGAACAGCTCTGAAACTGGAGGTTTCTCTCTCCTCTCTGCATTCTGAATTGCTTGCAACAACTGATCAACCAATGAAATGGCAACTCTTAACAAATCGATACAACCAAATTGGAAATGTAAGATGATTGTAAAAGACTTCCTCTTGAAGATTCAGAAGGAAGCTCCTTCTGAATTCATGCGTGGTCTAATAGAATATAAACAAGTGGATTTTTTAATTTTGTGATGCACTTATCCGTATGCTATTGGATCACGAAGTAATTCAGGAGGAGCTTTCTCTTCGATCTTGGAGTGGAGTCTTTTTTCAAGATGATTGGATTTGGACCTGCTGTTTAACTGTGGTTCTATGGTTGGATTCATCTTCCTGAGTGAGCCATCGATTGGTCGTGAGCCAGTTGGAGAAGCGATTCACAGGGTTGCGCTCCATCTTCCAGTACTGAATCTCGTCCATGGCTCGATACTTGCTGGAATCGTCGGAGGTGGAGTGGTGGCCCACTCTGTAAGTCAATGCCTCGACGAGAACCGGCGCCTGCTCCGCCACGGCCATGGCTCGAGCTCTGCGAATGGCGGTGTAGACGGCTAGGGCATCGTTTCCGTCGATTCGGATGCTGCGGATTCCGTACGCTTGTCCTTTCACCACTACGCCGTCACCTGAGAAATCAAATCGGAAATCCGAAATCGGAAATTGGAATTTTGGAATTGGAAACTAGCGAATTTGGGAATGGTACTGCGGAATTGTTCTTCGACGGAGGTGCTGATGGCCCAGCCGTTGTTGCGGCAGATGAAAATCACTGGTGCTCTCAGTACTGCTGCGAAATTTAACGCTGCGTGGAAATCACCCTGAAAATTGTAAATGTAATTAACTCTATATGTTGTTTCATTTTCTCCTCCTAAATTTTATCAATTTTCACTCTAAACTTCATAGAAAAATAAAGTTTGACTAATGCTCAAAATTTATCATTAAATAACTTATAAATTTTGACAACGAAAAAAACTGACTTTGATGTTATTTTTGTCTAAATTCTATCCATTTCTTCCTACCAAATATTTGTTATTTTTTGTCTAAAAAATCCAACTTTTATCCTAAAACTTGATAGAACGTAACAACGTTTCGTTTAAACGTGTACATTCAATGCATTATGAAATACAGCTTAATATAAAATTGACGAGAATTTGGAGAAAGACAATATTTTAGTTAGATTTTTGTTAGATTAATAAACTACTATTCAACCCAAAAGTGTTGGGTAAATTTAATTCATATGTTGGATATCTAATATTTATTGAAATTTGTAAGATTTTGGAGATTAATTCAATGGTCCATCTTGTACCTTGACAAGACTTAATTGTGCACACAACTTGAATCTCGTTGAAATTAATGAGTTTTTTTGGATCTTTGATGTTGGTTTTAGTTAAAATTAGTGACTAAATGTGGGAAAAGTTCCACACAAGGTAAAAATCGCAATACTTATGAATTTAATGAAATTGAATCTAGCAAGCTCGGGTAAAGCTCAATTTTTTTTTTAATTTTATAATAATATTTAATGTTAATTTGAAGTTTTTTTACTAAAAAAATAAAAATAAAAAACTTGATTTTAAAAATAAAATGATTATAAATTGGACGGTAATTAATTTAATTTACCTCGCTGGTGGTGCCATCTCCAAAATAAGTGACTGCGCACGCAT

mRNA sequence

ATCAAATCGTCGGCACATTTTTCAAAAAAAAAATTGGAAGAACAAAGAATCGGTGGGAAGAAGCAAAAAAGTTCAGTTCATGCCTTCTTTTTCCTTTGAATTGAACGAATATTTTCCAACTTTCCTTTCCCTCTCTACTCTGTGCTTCTTGTATTTCCGATGTCGTCCGCTCCGTCTTCGAGTCAGCCGGAGTTTGATTACTTGTTCAAGTTGCTGTTGATTGGGGACTCTGGAGTAGGGAAGAGTACGCTTCTTTTGCGCTTCACGTCTGATTCCTTTGAGGATCTTTCTCCCACTATTGGTGTGGATTTCAAGATTAAGCATGTGACAGTTGGGGGCAAAAAGTTGAAACTTGCAATATGGGACACAGCTGGGCAGGAGAGGTTTCGTACACTAACAGGTTCATATTACAGGGGAGCTCAAGGGATCATTATGGTGTATGATGTGACTCGGCGCGAGACATTCACAAATCTGTCTGACATATGGGCCAAAGAAATCGACATGTATTCTACAAATCAGGATTGCATCAAGATGCTTGTTGGAAACAAGGTGGACAAGGAAAGTGAAAGGGTAGTGAGTAAGAAAGAGGGAATTGACTTTGCTCGAGAATATGGATGCCTGTTTCTTGAATGCAGTGCAAAAACTCGAGTTAATGTGGAGCAGTGCTTTGACGAGCTTGTGTTGAAGATTTTGGACACTCCCAGTCTTTTGGCTGACGGCTCAACAGGTCTGAAAAAGAACATCTTCAAAGAGAAACCTCCTCAAGCGAATGCATCACCTGGTGGCTGCTGCTCATATTGATTTTATTCTAAGAATTTCAGAAGCATCTTCATTTTGTTTTAGTTTCAACACCCCCTGAAGTCAAAAGGTTCATGCTCTTCATCTTCCCTTTTATGGATTATGACTTTTAAAGTTCGTTCAACTAGAACATCTGGCCGAGCGATTTCCTTGTACTCTTTTAGTCTTTGTTACCAGGCCGACGATTAATTGATTTATTTTGGTGTGAGTTTGATTTAACATGAACTGGAGGGGATCGTATCAATACTTCAAGTTTCAAGACCGACTTCTTTCAACTGCTCAATCTATGCACTAGCAGTTATAGAGCAAGAAAGAATGGTGCTCCAAACAAGAAAAGGCAATTGAGTCTTGATTTAACTATTTAAGTTAATGAAAAGCATGGCGAGAAAGCAAATCTGACTCGTAAACGATCAGTTAAGTGACTGCTCAATTTCTCAATTCCTTCAATTTATCGATATAGAGAATAGTTTCTCAAGCAAGTCGATCGACCTTATAATCTTGCACCCAACACAATTTTTCTAAACTCGTGCTTCTTAGATGTCAAACCCACATCGACAAGGTGGATGTCCGAATTTGTGCTTAGACTTGGAGATTTTATTCACCGCACAAGAGAAATAGAATTAAGTTCCGAATTAATTTACATAACAACATTTGCATGATCTTAACCAATATGAGCTTTAACTCTTTTTTGGGTCAAGCTTGCATTTTCCATCAAATTTAGGCACCAAATGAACTTTGTTACAATCTAAAGAGGAACATCAGAAGGATAATCTTGAGGGTACCTCTTCATAGTTTGCCTTAGTACTTGCTCTTGTTCATGGAGGTTTGAGGGAACATTATCATACACATCACTGAACAGCTCTGAAACTGGAGGTTTCTCTCTCCTCTCTGCATTCTGAATTGCTTGCAACAACTGATCAACCAATGAAATGGCAACTCTTAACAAATCGATACAACCAAATTGGAAATGTAAGATGATTGTAAAAGACTTCCTCTTGAAGATTCAGAAGGAAGCTCCTTCTGAATTCATGCGTGGTCTAATAGAATATAAACAAGTGGATTTTTTAATTTTGTGATGCACTTATCCGTATGCTATTGGATCACGAAGTAATTCAGGAGGAGCTTTCTCTTCGATCTTGGAGTGGAGTCTTTTTTCAAGATGATTGGATTTGGACCTGCTGTTTAACTGTGGTTCTATGGTTGGATTCATCTTCCTGAGTGAGCCATCGATTGGTCGTGAGCCAGTTGGAGAAGCGATTCACAGGGTTGCGCTCCATCTTCCAGTACTGAATCTCGTCCATGGCTCGATACTTGCTGGAATCGTCGGAGGTGGAGTGGTGGCCCACTCTGTAAGTCAATGCCTCGACGAGAACCGGCGCCTGCTCCGCCACGGCCATGGCTCGAGCTCTGCGAATGGCGGTGTAGACGGCTAGGGCATCGTTTCCGTCGATTCGGATGCTGCGGATTCCGTACGCTTGTCCTTTCACCACTACGCCGTCACCTGAGAAATCAAATCGGAAATCCGAAATCGGAAATTGGAATTTTGGAATTGGAAACTAGCGAATTTGGGAATGGTACTGCGGAATTGTTCTTCGACGGAGGTGCTGATGGCCCAGCCGTTGTTGCGGCAGATGAAAATCACTGGTGCTCTCAGTACTGCTGCGAAATTTAACGCTGCGTGGAAATCACCCTGAAAATTGTAAATGTAATTAACTCTATATGTTGTTTCATTTTCTCCTCCTAAATTTTATCAATTTTCACTCTAAACTTCATAGAAAAATAAAGTTTGACTAATGCTCAAAATTTATCATTAAATAACTTATAAATTTTGACAACGAAAAAAACTGACTTTGATGTTATTTTTGTCTAAATTCTATCCATTTCTTCCTACCAAATATTTGTTATTTTTTGTCTAAAAAATCCAACTTTTATCCTAAAACTTGATAGAACGTAACAACGTTTCGTTTAAACGTGTACATTCAATGCATTATGAAATACAGCTTAATATAAAATTGACGAGAATTTGGAGAAAGACAATATTTTAGTTAGATTTTTGTTAGATTAATAAACTACTATTCAACCCAAAAGTGTTGGGTAAATTTAATTCATATGTTGGATATCTAATATTTATTGAAATTTGTAAGATTTTGGAGATTAATTCAATGGTCCATCTTGTACCTTGACAAGACTTAATTGTGCACACAACTTGAATCTCGTTGAAATTAATGAGTTTTTTTGGATCTTTGATGTTGGTTTTAGTTAAAATTAGTGACTAAATGTGGGAAAAGTTCCACACAAGGTAAAAATCGCAATACTTATGAATTTAATGAAATTGAATCTAGCAAGCTCGGGTAAAGCTCAATTTTTTTTTTAATTTTATAATAATATTTAATGTTAATTTGAAGTTTTTTTACTAAAAAAATAAAAATAAAAAACTTGATTTTAAAAATAAAATGATTATAAATTGGACGGTAATTAATTTAATTTACCTCGCTGGTGGTGCCATCTCCAAAATAAGTGACTGCGCACGCAT

Coding sequence (CDS)

ATGTCGTCCGCTCCGTCTTCGAGTCAGCCGGAGTTTGATTACTTGTTCAAGTTGCTGTTGATTGGGGACTCTGGAGTAGGGAAGAGTACGCTTCTTTTGCGCTTCACGTCTGATTCCTTTGAGGATCTTTCTCCCACTATTGGTGTGGATTTCAAGATTAAGCATGTGACAGTTGGGGGCAAAAAGTTGAAACTTGCAATATGGGACACAGCTGGGCAGGAGAGGTTTCGTACACTAACAGGTTCATATTACAGGGGAGCTCAAGGGATCATTATGGTGTATGATGTGACTCGGCGCGAGACATTCACAAATCTGTCTGACATATGGGCCAAAGAAATCGACATGTATTCTACAAATCAGGATTGCATCAAGATGCTTGTTGGAAACAAGGTGGACAAGGAAAGTGAAAGGGTAGTGAGTAAGAAAGAGGGAATTGACTTTGCTCGAGAATATGGATGCCTGTTTCTTGAATGCAGTGCAAAAACTCGAGTTAATGTGGAGCAGTGCTTTGACGAGCTTGTGTTGAAGATTTTGGACACTCCCAGTCTTTTGGCTGACGGCTCAACAGGTCTGAAAAAGAACATCTTCAAAGAGAAACCTCCTCAAGCGAATGCATCACCTGGTGGCTGCTGCTCATATTGA

Protein sequence

MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEDLSPTIGVDFKIKHVTVGGKKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDMYSTNQDCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDTPSLLADGSTGLKKNIFKEKPPQANASPGGCCSY

Homology

[Close]

BLAST of MC11g1146 vs. ExPASy Swiss-Prot
Match: O23657 (Ras-related protein RABC1 OS=Arabidopsis thaliana OX=3702 GN=RABC1 PE=1 SV=1)

HSP 1 Score: 362.1 bits (928), Expect = 4.4e-99
Identity = 176/208 (84.62%), Postives = 193/208 (92.79%), Query Frame = 0


Query: 6   SSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEDLSPTIGVDFKIKHVTVGGKKLKL 65
           SS QPEFDYLFK+LLIGDSGVGKS+LLL FTS++F+DLSPTIGVDFK+K++T+G KKLKL
Sbjct: 4   SSGQPEFDYLFKVLLIGDSGVGKSSLLLSFTSNTFDDLSPTIGVDFKVKYLTIGEKKLKL 63

Query: 66  AIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDMYSTNQDCIKM 125
           AIWDTAGQERFRTLT SYYRGAQGIIMVYDVTRR+TFTNLSDIWAKEID+YSTNQDCIKM
Sbjct: 64  AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQDCIKM 123

Query: 126 LVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDTPSLLA 185
           LVGNKVDKESER VSKKEGIDFAREYGCLFLECSAKTRVNVEQCF+ELVLKIL+TPSL A
Sbjct: 124 LVGNKVDKESERAVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILETPSLTA 183

Query: 186 DGSTGLKKNIFKEKPPQ-ANASPGGCCS 213
           +GS+G KKNIFK+ P Q  + S   CCS
Sbjct: 184 EGSSGGKKNIFKQNPAQTTSTSSSYCCS 211

[Close]

BLAST of MC11g1146 vs. ExPASy Swiss-Prot
Match: O49841 (Ras-related protein RABC2a OS=Arabidopsis thaliana OX=3702 GN=RABC2A PE=1 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 4.0e-84
Identity = 146/207 (70.53%), Postives = 175/207 (84.54%), Query Frame = 0


Query: 6   SSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEDLSPTIGVDFKIKHVTVGGKKLKL 65
           SS Q  +D  FK+LLIGDSGVGKS+LL+ F S S EDL+PTIGVDFKIK +TVGGK+LKL
Sbjct: 4   SSGQSGYDLSFKILLIGDSGVGKSSLLVSFISSSVEDLAPTIGVDFKIKQLTVGGKRLKL 63

Query: 66  AIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDMYSTNQDCIKM 125
            IWDTAGQERFRTLT SYYRGAQGII+VYDVTRRETFTNL D+W KEI++YSTNQ+C++M
Sbjct: 64  TIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLVDVWGKEIELYSTNQECVRM 123

Query: 126 LVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDTPSLLA 185
           LVGNKVD+ESER VS++EGI  A+E  C+FLECSA+TR NVEQCF+EL LKI++ PSLL 
Sbjct: 124 LVGNKVDRESERGVSREEGIALAKELNCMFLECSARTRQNVEQCFEELALKIMEVPSLLE 183

Query: 186 DGSTGLKKNIFKEKPPQANASPGGCCS 213
           +GS+ +K+NI K+KP     +  GCCS
Sbjct: 184 EGSSAVKRNILKQKPEHQTNTQSGCCS 210

[Close]

BLAST of MC11g1146 vs. ExPASy Swiss-Prot
Match: Q9SF92 (Ras-related protein RABC2b OS=Arabidopsis thaliana OX=3702 GN=RABC2B PE=2 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 5.8e-75
Identity = 137/207 (66.18%), Postives = 165/207 (79.71%), Query Frame = 0


Query: 6   SSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEDLSPTIGVDFKIKHVTVGGKKLKL 65
           SS Q  +D  FK+LLIGDSGVGKS+LLL F S S EDL+PTIGVDFKIK + V GK+LKL
Sbjct: 4   SSGQSGYDLSFKILLIGDSGVGKSSLLLSFISSSVEDLAPTIGVDFKIKQMKVRGKRLKL 63

Query: 66  AIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDMYSTNQDCIKM 125
            IWDTAGQE+FRTLT SY+RG+QGII+VYDVT+RETF NL+DIWAKEI++YSTN DCIKM
Sbjct: 64  TIWDTAGQEKFRTLTSSYFRGSQGIILVYDVTKRETFLNLADIWAKEIELYSTNHDCIKM 123

Query: 126 LVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDTPSLLA 185
           LVGNKVD+ESER VS++EG+  A++  CLF ECSA+TR NV  CF+EL LKI++ PSLL 
Sbjct: 124 LVGNKVDRESERKVSREEGMALAKDLNCLFHECSARTRENVNGCFEELALKIMEVPSLLE 183

Query: 186 DGSTGLKKNIFKEKPPQANASPGGCCS 213
           +GS+ +K+       P   A  G CCS
Sbjct: 184 EGSSSVKRK------PDYRAHQGRCCS 204

[Close]

BLAST of MC11g1146 vs. ExPASy Swiss-Prot
Match: P36862 (GTP-binding protein yptV3 OS=Volvox carteri OX=3067 GN=YPTV3 PE=3 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 1.5e-59
Identity = 113/179 (63.13%), Postives = 138/179 (77.09%), Query Frame = 0


Query: 13  DYLFKLLLIGDSGVGKSTLLLRFTSDSFED-LSPTIGVDFKIKHVTVGGKKLKLAIWDTA 72
           DY FK+LL+GDSGVGKS +L RFTS  FE+  + TIGVDFK+K++T  GK+ KL IWDTA
Sbjct: 7   DYTFKVLLVGDSGVGKSCILTRFTSGIFEESTTSTIGVDFKVKYLTADGKRCKLTIWDTA 66

Query: 73  GQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDMYSTNQDCIKMLVGNKV 132
           GQERFRTLT SYYRGAQGII VYDVTRR+TF +L   W +E D+YST +  IKM+V NKV
Sbjct: 67  GQERFRTLTSSYYRGAQGIIFVYDVTRRDTFESLEANWMREFDIYSTVESAIKMVVANKV 126

Query: 133 DKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDTPSLLADGSTG 191
           D  ++R VS +EG DFAR +GCLF+E SA+  + V Q F+EL+LKILDTP LL   + G
Sbjct: 127 DLSAQRQVSSEEGHDFARRHGCLFVETSARANLAVGQAFEELLLKILDTPLLLETTAVG 185

[Close]

BLAST of MC11g1146 vs. ExPASy Swiss-Prot
Match: Q6DHC1 (Ras-related protein Rab-18-B OS=Danio rerio OX=7955 GN=rab18b PE=2 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 1.3e-55
Identity = 111/197 (56.35%), Postives = 144/197 (73.10%), Query Frame = 0


Query: 17  KLLLIGDSGVGKSTLLLRFTSDSFE-DLSPTIGVDFKIKHVTVGGKKLKLAIWDTAGQER 76
           K+L+IG+SGVGKS+LLLRFT D+F+ +L+ TIGVDFK+K + + G + KLAIWDTAGQER
Sbjct: 10  KILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTIAIDGNRAKLAIWDTAGQER 69

Query: 77  FRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDMYSTNQDCIKMLVGNKVDKES 136
           FRTLT SYYRGAQG+I+VYDVT+R+TFT L + W  E++ Y T  D +KMLVGNK+DK++
Sbjct: 70  FRTLTPSYYRGAQGVILVYDVTKRDTFTKLEN-WLNELETYCTRNDLVKMLVGNKIDKDN 129

Query: 137 ERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDTPSLLADGSTGLKKNI 196
            R V + EG+ FAR++  LF+E SAKTR  V+  F+ELV KIL TP L  + S       
Sbjct: 130 -REVDRNEGLKFARKHSMLFIEASAKTRDGVQCAFEELVEKILQTPGLW-ESSIQNHGVQ 189

Query: 197 FKEKPPQANASPGGCCS 213
             +  PQ   + GG CS
Sbjct: 190 LSDNEPQRQGACGGYCS 203

[Close]

BLAST of MC11g1146 vs. NCBI nr
Match: XP_022153719.1 (ras-related protein RABC1-like [Momordica charantia])

HSP 1 Score: 432 bits (1110), Expect = 1.10e-152
Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 0


Query: 1   MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEDLSPTIGVDFKIKHVTVGG 60
           MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEDLSPTIGVDFKIKHVTVGG
Sbjct: 1   MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEDLSPTIGVDFKIKHVTVGG 60

Query: 61  KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDMYSTNQ 120
           KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDMYSTNQ
Sbjct: 61  KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDMYSTNQ 120

Query: 121 DCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDT 180
           DCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDT
Sbjct: 121 DCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDT 180

Query: 181 PSLLADGSTGLKKNIFKEKPPQANASPGGCCSY 213
           PSLLADGSTGLKKNIFKEKPPQANASPGGCCSY
Sbjct: 181 PSLLADGSTGLKKNIFKEKPPQANASPGGCCSY 213

[Close]

BLAST of MC11g1146 vs. NCBI nr
Match: XP_023525903.1 (ras-related protein RABC1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 427 bits (1098), Expect = 7.42e-151
Identity = 210/213 (98.59%), Postives = 212/213 (99.53%), Query Frame = 0


Query: 1   MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEDLSPTIGVDFKIKHVTVGG 60
           MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFE+LSPTIGVDFKIKHVTVGG
Sbjct: 1   MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEELSPTIGVDFKIKHVTVGG 60

Query: 61  KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDMYSTNQ 120
           KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEID+YSTNQ
Sbjct: 61  KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQ 120

Query: 121 DCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDT 180
           DCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDT
Sbjct: 121 DCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDT 180

Query: 181 PSLLADGSTGLKKNIFKEKPPQANASPGGCCSY 213
           PSLLADGSTGLKKNIFKEKPPQ NASPGGCCSY
Sbjct: 181 PSLLADGSTGLKKNIFKEKPPQENASPGGCCSY 213

[Close]

BLAST of MC11g1146 vs. NCBI nr
Match: XP_022926286.1 (ras-related protein RABC1-like [Cucurbita moschata] >XP_022926287.1 ras-related protein RABC1-like [Cucurbita moschata] >XP_022981607.1 ras-related protein RABC1-like [Cucurbita maxima] >KAG7037274.1 Ras-related protein RABC1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 424 bits (1090), Expect = 1.23e-149
Identity = 209/213 (98.12%), Postives = 211/213 (99.06%), Query Frame = 0


Query: 1   MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEDLSPTIGVDFKIKHVTVGG 60
           MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFE+LSPTIGVDFKIKHVTVGG
Sbjct: 1   MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEELSPTIGVDFKIKHVTVGG 60

Query: 61  KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDMYSTNQ 120
           KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEID+YSTNQ
Sbjct: 61  KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQ 120

Query: 121 DCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDT 180
           DCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDT
Sbjct: 121 DCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDT 180

Query: 181 PSLLADGSTGLKKNIFKEKPPQANASPGGCCSY 213
           PSLLADGSTGLKKNIFKEKPPQ NAS GGCCSY
Sbjct: 181 PSLLADGSTGLKKNIFKEKPPQENASAGGCCSY 213

[Close]

BLAST of MC11g1146 vs. NCBI nr
Match: KAG6607690.1 (Ras-related protein RABC1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 424 bits (1090), Expect = 3.26e-149
Identity = 209/213 (98.12%), Postives = 211/213 (99.06%), Query Frame = 0


Query: 1   MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEDLSPTIGVDFKIKHVTVGG 60
           MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFE+LSPTIGVDFKIKHVTVGG
Sbjct: 28  MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEELSPTIGVDFKIKHVTVGG 87

Query: 61  KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDMYSTNQ 120
           KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEID+YSTNQ
Sbjct: 88  KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQ 147

Query: 121 DCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDT 180
           DCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDT
Sbjct: 148 DCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDT 207

Query: 181 PSLLADGSTGLKKNIFKEKPPQANASPGGCCSY 213
           PSLLADGSTGLKKNIFKEKPPQ NAS GGCCSY
Sbjct: 208 PSLLADGSTGLKKNIFKEKPPQENASAGGCCSY 240

[Close]

BLAST of MC11g1146 vs. NCBI nr
Match: XP_011657438.1 (ras-related protein RABC1 isoform X1 [Cucumis sativus] >KGN47732.1 hypothetical protein Csa_018233 [Cucumis sativus])

HSP 1 Score: 421 bits (1082), Expect = 2.04e-148
Identity = 207/213 (97.18%), Postives = 209/213 (98.12%), Query Frame = 0


Query: 1   MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEDLSPTIGVDFKIKHVTVGG 60
           MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEDLSPTIGVDFKIKHVTVGG
Sbjct: 1   MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEDLSPTIGVDFKIKHVTVGG 60

Query: 61  KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDMYSTNQ 120
           KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEID+YSTNQ
Sbjct: 61  KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQ 120

Query: 121 DCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDT 180
           DCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDT
Sbjct: 121 DCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDT 180

Query: 181 PSLLADGSTGLKKNIFKEKPPQANASPGGCCSY 213
           PSLLADGSTGLKKNIFKEKPP+   S GGCCSY
Sbjct: 181 PSLLADGSTGLKKNIFKEKPPETTTSAGGCCSY 213

[Close]

BLAST of MC11g1146 vs. ExPASy TrEMBL
Match: A0A6J1DJX3 (ras-related protein RABC1-like OS=Momordica charantia OX=3673 GN=LOC111021171 PE=4 SV=1)

HSP 1 Score: 432 bits (1110), Expect = 5.32e-153
Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 0


Query: 1   MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEDLSPTIGVDFKIKHVTVGG 60
           MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEDLSPTIGVDFKIKHVTVGG
Sbjct: 1   MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEDLSPTIGVDFKIKHVTVGG 60

Query: 61  KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDMYSTNQ 120
           KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDMYSTNQ
Sbjct: 61  KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDMYSTNQ 120

Query: 121 DCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDT 180
           DCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDT
Sbjct: 121 DCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDT 180

Query: 181 PSLLADGSTGLKKNIFKEKPPQANASPGGCCSY 213
           PSLLADGSTGLKKNIFKEKPPQANASPGGCCSY
Sbjct: 181 PSLLADGSTGLKKNIFKEKPPQANASPGGCCSY 213

[Close]

BLAST of MC11g1146 vs. ExPASy TrEMBL
Match: A0A6J1EEF0 (ras-related protein RABC1-like OS=Cucurbita moschata OX=3662 GN=LOC111433468 PE=4 SV=1)

HSP 1 Score: 424 bits (1090), Expect = 5.96e-150
Identity = 209/213 (98.12%), Postives = 211/213 (99.06%), Query Frame = 0


Query: 1   MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEDLSPTIGVDFKIKHVTVGG 60
           MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFE+LSPTIGVDFKIKHVTVGG
Sbjct: 1   MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEELSPTIGVDFKIKHVTVGG 60

Query: 61  KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDMYSTNQ 120
           KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEID+YSTNQ
Sbjct: 61  KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQ 120

Query: 121 DCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDT 180
           DCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDT
Sbjct: 121 DCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDT 180

Query: 181 PSLLADGSTGLKKNIFKEKPPQANASPGGCCSY 213
           PSLLADGSTGLKKNIFKEKPPQ NAS GGCCSY
Sbjct: 181 PSLLADGSTGLKKNIFKEKPPQENASAGGCCSY 213

[Close]

BLAST of MC11g1146 vs. ExPASy TrEMBL
Match: A0A6J1IUG0 (ras-related protein RABC1-like OS=Cucurbita maxima OX=3661 GN=LOC111480676 PE=4 SV=1)

HSP 1 Score: 424 bits (1090), Expect = 5.96e-150
Identity = 209/213 (98.12%), Postives = 211/213 (99.06%), Query Frame = 0


Query: 1   MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEDLSPTIGVDFKIKHVTVGG 60
           MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFE+LSPTIGVDFKIKHVTVGG
Sbjct: 1   MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEELSPTIGVDFKIKHVTVGG 60

Query: 61  KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDMYSTNQ 120
           KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEID+YSTNQ
Sbjct: 61  KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQ 120

Query: 121 DCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDT 180
           DCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDT
Sbjct: 121 DCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDT 180

Query: 181 PSLLADGSTGLKKNIFKEKPPQANASPGGCCSY 213
           PSLLADGSTGLKKNIFKEKPPQ NAS GGCCSY
Sbjct: 181 PSLLADGSTGLKKNIFKEKPPQENASAGGCCSY 213

[Close]

BLAST of MC11g1146 vs. ExPASy TrEMBL
Match: A0A0A0KH59 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G395140 PE=4 SV=1)

HSP 1 Score: 421 bits (1082), Expect = 9.89e-149
Identity = 207/213 (97.18%), Postives = 209/213 (98.12%), Query Frame = 0


Query: 1   MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEDLSPTIGVDFKIKHVTVGG 60
           MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEDLSPTIGVDFKIKHVTVGG
Sbjct: 1   MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEDLSPTIGVDFKIKHVTVGG 60

Query: 61  KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDMYSTNQ 120
           KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEID+YSTNQ
Sbjct: 61  KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQ 120

Query: 121 DCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDT 180
           DCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDT
Sbjct: 121 DCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDT 180

Query: 181 PSLLADGSTGLKKNIFKEKPPQANASPGGCCSY 213
           PSLLADGSTGLKKNIFKEKPP+   S GGCCSY
Sbjct: 181 PSLLADGSTGLKKNIFKEKPPETTTSAGGCCSY 213

[Close]

BLAST of MC11g1146 vs. ExPASy TrEMBL
Match: A0A5A7V1Q4 (Ras-related protein RABC1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold4863G00120 PE=4 SV=1)

HSP 1 Score: 420 bits (1079), Expect = 2.84e-148
Identity = 206/213 (96.71%), Postives = 209/213 (98.12%), Query Frame = 0


Query: 1   MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEDLSPTIGVDFKIKHVTVGG 60
           MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEDLSPTIGVDFKIKHVTVGG
Sbjct: 1   MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEDLSPTIGVDFKIKHVTVGG 60

Query: 61  KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDMYSTNQ 120
           KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEID+YSTNQ
Sbjct: 61  KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQ 120

Query: 121 DCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDT 180
           DCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDT
Sbjct: 121 DCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDT 180

Query: 181 PSLLADGSTGLKKNIFKEKPPQANASPGGCCSY 213
           PSLLADGSTGLKKNIFKEKPP+   + GGCCSY
Sbjct: 181 PSLLADGSTGLKKNIFKEKPPETTTTAGGCCSY 213

[Close]

BLAST of MC11g1146 vs. TAIR 10
Match: AT1G43890.1 (RAB GTPASE HOMOLOG B18 )

HSP 1 Score: 362.1 bits (928), Expect = 3.1e-100
Identity = 176/208 (84.62%), Postives = 193/208 (92.79%), Query Frame = 0


Query: 6   SSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEDLSPTIGVDFKIKHVTVGGKKLKL 65
           SS QPEFDYLFK+LLIGDSGVGKS+LLL FTS++F+DLSPTIGVDFK+K++T+G KKLKL
Sbjct: 4   SSGQPEFDYLFKVLLIGDSGVGKSSLLLSFTSNTFDDLSPTIGVDFKVKYLTIGEKKLKL 63

Query: 66  AIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDMYSTNQDCIKM 125
           AIWDTAGQERFRTLT SYYRGAQGIIMVYDVTRR+TFTNLSDIWAKEID+YSTNQDCIKM
Sbjct: 64  AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQDCIKM 123

Query: 126 LVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDTPSLLA 185
           LVGNKVDKESER VSKKEGIDFAREYGCLFLECSAKTRVNVEQCF+ELVLKIL+TPSL A
Sbjct: 124 LVGNKVDKESERAVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILETPSLTA 183

Query: 186 DGSTGLKKNIFKEKPPQ-ANASPGGCCS 213
           +GS+G KKNIFK+ P Q  + S   CCS
Sbjct: 184 EGSSGGKKNIFKQNPAQTTSTSSSYCCS 211

[Close]

BLAST of MC11g1146 vs. TAIR 10
Match: AT1G43890.2 (RAB GTPASE HOMOLOG B18 )

HSP 1 Score: 362.1 bits (928), Expect = 3.1e-100
Identity = 176/208 (84.62%), Postives = 193/208 (92.79%), Query Frame = 0


Query: 6   SSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEDLSPTIGVDFKIKHVTVGGKKLKL 65
           SS QPEFDYLFK+LLIGDSGVGKS+LLL FTS++F+DLSPTIGVDFK+K++T+G KKLKL
Sbjct: 4   SSGQPEFDYLFKVLLIGDSGVGKSSLLLSFTSNTFDDLSPTIGVDFKVKYLTIGEKKLKL 63

Query: 66  AIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDMYSTNQDCIKM 125
           AIWDTAGQERFRTLT SYYRGAQGIIMVYDVTRR+TFTNLSDIWAKEID+YSTNQDCIKM
Sbjct: 64  AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQDCIKM 123

Query: 126 LVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDTPSLLA 185
           LVGNKVDKESER VSKKEGIDFAREYGCLFLECSAKTRVNVEQCF+ELVLKIL+TPSL A
Sbjct: 124 LVGNKVDKESERAVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILETPSLTA 183

Query: 186 DGSTGLKKNIFKEKPPQ-ANASPGGCCS 213
           +GS+G KKNIFK+ P Q  + S   CCS
Sbjct: 184 EGSSGGKKNIFKQNPAQTTSTSSSYCCS 211

[Close]

BLAST of MC11g1146 vs. TAIR 10
Match: AT1G43890.3 (RAB GTPASE HOMOLOG B18 )

HSP 1 Score: 362.1 bits (928), Expect = 3.1e-100
Identity = 176/208 (84.62%), Postives = 193/208 (92.79%), Query Frame = 0


Query: 6   SSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEDLSPTIGVDFKIKHVTVGGKKLKL 65
           SS QPEFDYLFK+LLIGDSGVGKS+LLL FTS++F+DLSPTIGVDFK+K++T+G KKLKL
Sbjct: 4   SSGQPEFDYLFKVLLIGDSGVGKSSLLLSFTSNTFDDLSPTIGVDFKVKYLTIGEKKLKL 63

Query: 66  AIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDMYSTNQDCIKM 125
           AIWDTAGQERFRTLT SYYRGAQGIIMVYDVTRR+TFTNLSDIWAKEID+YSTNQDCIKM
Sbjct: 64  AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQDCIKM 123

Query: 126 LVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDTPSLLA 185
           LVGNKVDKESER VSKKEGIDFAREYGCLFLECSAKTRVNVEQCF+ELVLKIL+TPSL A
Sbjct: 124 LVGNKVDKESERAVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILETPSLTA 183

Query: 186 DGSTGLKKNIFKEKPPQ-ANASPGGCCS 213
           +GS+G KKNIFK+ P Q  + S   CCS
Sbjct: 184 EGSSGGKKNIFKQNPAQTTSTSSSYCCS 211

[Close]

BLAST of MC11g1146 vs. TAIR 10
Match: AT5G03530.1 (RAB GTPase homolog C2A )

HSP 1 Score: 312.4 bits (799), Expect = 2.8e-85
Identity = 146/207 (70.53%), Postives = 175/207 (84.54%), Query Frame = 0


Query: 6   SSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEDLSPTIGVDFKIKHVTVGGKKLKL 65
           SS Q  +D  FK+LLIGDSGVGKS+LL+ F S S EDL+PTIGVDFKIK +TVGGK+LKL
Sbjct: 4   SSGQSGYDLSFKILLIGDSGVGKSSLLVSFISSSVEDLAPTIGVDFKIKQLTVGGKRLKL 63

Query: 66  AIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDMYSTNQDCIKM 125
            IWDTAGQERFRTLT SYYRGAQGII+VYDVTRRETFTNL D+W KEI++YSTNQ+C++M
Sbjct: 64  TIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLVDVWGKEIELYSTNQECVRM 123

Query: 126 LVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDTPSLLA 185
           LVGNKVD+ESER VS++EGI  A+E  C+FLECSA+TR NVEQCF+EL LKI++ PSLL 
Sbjct: 124 LVGNKVDRESERGVSREEGIALAKELNCMFLECSARTRQNVEQCFEELALKIMEVPSLLE 183

Query: 186 DGSTGLKKNIFKEKPPQANASPGGCCS 213
           +GS+ +K+NI K+KP     +  GCCS
Sbjct: 184 EGSSAVKRNILKQKPEHQTNTQSGCCS 210

[Close]

BLAST of MC11g1146 vs. TAIR 10
Match: AT3G09910.1 (RAB GTPase homolog C2B )

HSP 1 Score: 282.0 bits (720), Expect = 4.1e-76
Identity = 137/207 (66.18%), Postives = 165/207 (79.71%), Query Frame = 0


Query: 6   SSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEDLSPTIGVDFKIKHVTVGGKKLKL 65
           SS Q  +D  FK+LLIGDSGVGKS+LLL F S S EDL+PTIGVDFKIK + V GK+LKL
Sbjct: 4   SSGQSGYDLSFKILLIGDSGVGKSSLLLSFISSSVEDLAPTIGVDFKIKQMKVRGKRLKL 63

Query: 66  AIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDMYSTNQDCIKM 125
            IWDTAGQE+FRTLT SY+RG+QGII+VYDVT+RETF NL+DIWAKEI++YSTN DCIKM
Sbjct: 64  TIWDTAGQEKFRTLTSSYFRGSQGIILVYDVTKRETFLNLADIWAKEIELYSTNHDCIKM 123

Query: 126 LVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDTPSLLA 185
           LVGNKVD+ESER VS++EG+  A++  CLF ECSA+TR NV  CF+EL LKI++ PSLL 
Sbjct: 124 LVGNKVDRESERKVSREEGMALAKDLNCLFHECSARTRENVNGCFEELALKIMEVPSLLE 183

Query: 186 DGSTGLKKNIFKEKPPQANASPGGCCS 213
           +GS+ +K+       P   A  G CCS
Sbjct: 184 EGSSSVKRK------PDYRAHQGRCCS 204

The following BLAST results are available for this feature:

BLAST of MC11g1146 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O23657	4.4e-99	84.62	Ras-related protein RABC1 OS=Arabidopsis thaliana OX=3702 GN=RABC1 PE=1 SV=1	[more]
O49841	4.0e-84	70.53	Ras-related protein RABC2a OS=Arabidopsis thaliana OX=3702 GN=RABC2A PE=1 SV=1	[more]
Q9SF92	5.8e-75	66.18	Ras-related protein RABC2b OS=Arabidopsis thaliana OX=3702 GN=RABC2B PE=2 SV=1	[more]
P36862	1.5e-59	63.13	GTP-binding protein yptV3 OS=Volvox carteri OX=3067 GN=YPTV3 PE=3 SV=1	[more]
Q6DHC1	1.3e-55	56.35	Ras-related protein Rab-18-B OS=Danio rerio OX=7955 GN=rab18b PE=2 SV=1	[more]

BLAST of MC11g1146 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022153719.1	1.10e-152	100.00	ras-related protein RABC1-like [Momordica charantia]	[more]
XP_023525903.1	7.42e-151	98.59	ras-related protein RABC1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022926286.1	1.23e-149	98.12	ras-related protein RABC1-like [Cucurbita moschata] >XP_022926287.1 ras-related ...	[more]
KAG6607690.1	3.26e-149	98.12	Ras-related protein RABC1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_011657438.1	2.04e-148	97.18	ras-related protein RABC1 isoform X1 [Cucumis sativus] >KGN47732.1 hypothetical ...	[more]

BLAST of MC11g1146 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DJX3	5.32e-153	100.00	ras-related protein RABC1-like OS=Momordica charantia OX=3673 GN=LOC111021171 PE...	[more]
A0A6J1EEF0	5.96e-150	98.12	ras-related protein RABC1-like OS=Cucurbita moschata OX=3662 GN=LOC111433468 PE=...	[more]
A0A6J1IUG0	5.96e-150	98.12	ras-related protein RABC1-like OS=Cucurbita maxima OX=3661 GN=LOC111480676 PE=4 ...	[more]
A0A0A0KH59	9.89e-149	97.18	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G395140 PE=4 SV=1	[more]
A0A5A7V1Q4	2.84e-148	96.71	Ras-related protein RABC1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]

BLAST of MC11g1146 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G43890.1	3.1e-100	84.62	RAB GTPASE HOMOLOG B18	[more]
AT1G43890.2	3.1e-100	84.62	RAB GTPASE HOMOLOG B18	[more]
AT1G43890.3	3.1e-100	84.62	RAB GTPASE HOMOLOG B18	[more]
AT5G03530.1	2.8e-85	70.53	RAB GTPase homolog C2A	[more]
AT3G09910.1	4.1e-76	66.18	RAB GTPase homolog C2B	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 155..177 score: 43.03 coord: 56..78 score: 52.5 coord: 120..133 score: 42.87 coord: 16..37 score: 55.22 coord: 38..54 score: 29.74
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 13..180 e-value: 4.3E-35 score: 132.6
None	No IPR available	SMART	SM00177	arf_sub_2	coord: 4..181 e-value: 0.0085 score: -3.3
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 16..180 e-value: 6.0E-99 score: 344.7
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 21..213 e-value: 5.7E-6 score: 35.2
None	No IPR available	PANTHER	PTHR47977:SF46	BNAA05G18680D PROTEIN	coord: 7..212
None	No IPR available	PANTHER	PTHR47977	LD21953P-RELATED	coord: 7..212
None	No IPR available	PROSITE	PS51419	RAB	coord: 11..211 score: 33.096855
None	No IPR available	PROSITE	PS51420	RHO	coord: 9..178 score: 9.022566
None	No IPR available	CDD	cd01863	Rab18	coord: 16..177 e-value: 3.35651E-106 score: 300.767
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 18..180 e-value: 8.1E-14 score: 56.6
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 17..178 e-value: 2.8E-57 score: 192.8
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 8..213 score: 18.802675
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 14..173 e-value: 1.8E-30 score: 103.9
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 9..211 e-value: 8.7E-66 score: 223.0
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 11..185

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC11g1146.1	MC11g1146.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
cellular_component	GO:0005794	Golgi apparatus
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding