Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CCGGCGAAGTTTCTGATTTTCGTCGTCGTCTTCCACCTCAAGTCCGCCGCCGACGACATACCCACGCCGATCTCCTGTGCTAACTGCTCCATTTGTCCGTACCTCTGCCACCCGCCGCCGGATCCTTCTTCTCCGACGTACGGGGTGCCGCCGCCGCCGCCGCAGCAGATTGCAGAGCCGCAGCCACTTCCGGTGCCGGTGGCTCCGGCGAACTGCCCTCCGACGGTGGTACAGTGCTGCCAGTTTTCTCCGCCGCCGCCGGGTGGTTACAACAACAACAACATATACACGCCGTTGAGCGAGGGCTGTTCATTTTTGAAACTTGGATTGGTCTCTGTTTTGGCCCCTGTTCTTGCGTTGGCCGCCATTTTC
mRNA sequence
CCGGCGAAGTTTCTGATTTTCGTCGTCGTCTTCCACCTCAAGTCCGCCGCCGACGACATACCCACGCCGATCTCCTGTGCTAACTGCTCCATTTGTCCGTACCTCTGCCACCCGCCGCCGGATCCTTCTTCTCCGACGTACGGGGTGCCGCCGCCGCCGCCGCAGCAGATTGCAGAGCCGCAGCCACTTCCGGTGCCGGTGGCTCCGGCGAACTGCCCTCCGACGGTGGTACAGTGCTGCCAGTTTTCTCCGCCGCCGCCGGGTGGTTACAACAACAACAACATATACACGCCGTTGAGCGAGGGCTGTTCATTTTTGAAACTTGGATTGGTCTCTGTTTTGGCCCCTGTTCTTGCGTTGGCCGCCATTTTC
Coding sequence (CDS)
CCGGCGAAGTTTCTGATTTTCGTCGTCGTCTTCCACCTCAAGTCCGCCGCCGACGACATACCCACGCCGATCTCCTGTGCTAACTGCTCCATTTGTCCGTACCTCTGCCACCCGCCGCCGGATCCTTCTTCTCCGACGTACGGGGTGCCGCCGCCGCCGCCGCAGCAGATTGCAGAGCCGCAGCCACTTCCGGTGCCGGTGGCTCCGGCGAACTGCCCTCCGACGGTGGTACAGTGCTGCCAGTTTTCTCCGCCGCCGCCGGGTGGTTACAACAACAACAACATATACACGCCGTTGAGCGAGGGCTGTTCATTTTTGAAACTTGGATTGGTCTCTGTTTTGGCCCCTGTTCTTGCGTTGGCCGCCATTTTC
Protein sequence
PAKFLIFVVVFHLKSAADDIPTPISCANCSICPYLCHPPPDPSSPTYGVPPPPPQQIAEPQPLPVPVAPANCPPTVVQCCQFSPPPPGGYNNNNIYTPLSEGCSFLKLGLVSVLAPVLALAAIF
Homology
BLAST of MC11g1058 vs. NCBI nr
Match:
KAG7037325.1 (hypothetical protein SDJN02_00950, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 147 bits (371), Expect = 7.84e-43
Identity = 88/133 (66.17%), Postives = 98/133 (73.68%), Query Frame = 0
Query: 1 PAKFLIFVVVFHLKSA---ADD--IPTPISCANCSICPYLCHPPPDPSSPTYGVPPPPPQ 60
PAKFL V+VFHLKSA ADD +PTP SC NC++C C PPPD + P +PPPPP
Sbjct: 3 PAKFLALVIVFHLKSAITAADDASMPTPTSCENCALCQSACRPPPD-AQPL--LPPPPPP 62
Query: 61 QIAEPQPLPVPVAPANCPPTVVQCCQFSPPP--PGGYNNNNIYTPL-SEGCS-FLKLGLV 120
IAEP+PLPVPV PANCPPT+VQCCQF PPP P N NNIYTP +E CS FLK GLV
Sbjct: 63 PIAEPEPLPVPVPPANCPPTIVQCCQFMPPPAPPPPPNGNNIYTPFYNESCSSFLKRGLV 122
Query: 121 SVLAPVLALAAIF 124
SVLAPV +AAIF
Sbjct: 123 SVLAPVFGVAAIF 132
BLAST of MC11g1058 vs. NCBI nr
Match:
KAG6607747.1 (hypothetical protein SDJN03_01089, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 145 bits (367), Expect = 3.18e-42
Identity = 87/133 (65.41%), Postives = 97/133 (72.93%), Query Frame = 0
Query: 1 PAKFLIFVVVFHLKSA---ADD--IPTPISCANCSICPYLCHPPPDPSSPTYGVPPPPPQ 60
PAKFL V+VFHLKSA ADD +PTP SC NC++C C PPPD + P +PPPPP
Sbjct: 3 PAKFLALVIVFHLKSAITAADDASMPTPTSCENCALCQSACRPPPD-AQPL--LPPPPPP 62
Query: 61 QIAEPQPLPVPVAPANCPPTVVQCCQFSPPP--PGGYNNNNIYTPL-SEGCS-FLKLGLV 120
IAEP+PLPVPV P NCPPT+VQCCQF PPP P N NNIYTP +E CS FLK GLV
Sbjct: 63 PIAEPEPLPVPVPPGNCPPTIVQCCQFMPPPAPPPPPNGNNIYTPFYNESCSSFLKRGLV 122
Query: 121 SVLAPVLALAAIF 124
SVLAPV +AAIF
Sbjct: 123 SVLAPVFGVAAIF 132
BLAST of MC11g1058 vs. NCBI nr
Match:
XP_008463043.1 (PREDICTED: sperm mitochondrial-associated cysteine-rich protein-like [Cucumis melo])
HSP 1 Score: 130 bits (326), Expect = 6.31e-36
Identity = 77/135 (57.04%), Postives = 86/135 (63.70%), Query Frame = 0
Query: 1 PAKFLIFVVVFHLKSAA---DD--IPTPISCANCSICPYLCHPPPDPSSPTYGVPPPPPQ 60
PAK L VVVF+L SA DD + TPISC NC+IC C PP P PPPPP
Sbjct: 3 PAKLLALVVVFNLNSAVSATDDAAMATPISCDNCTICQSTCRPPQSEPLPLLPPPPPPPA 62
Query: 61 QIAEPQPLPVPVAPANCPPTVVQCCQFSPPPP----GGYNNNNIYTPL--SEGCSFLKLG 120
AEP+PLP+PVAPANCPPT+VQCCQF PPPP N NIYTP+ SFL++G
Sbjct: 63 PYAEPEPLPIPVAPANCPPTIVQCCQFLPPPPPPPQATAGNGNIYTPIYNESSSSFLRVG 122
Query: 121 LVSVLAPVLALAAIF 124
L S LAPV L AIF
Sbjct: 123 LGSALAPVFGLVAIF 137
BLAST of MC11g1058 vs. NCBI nr
Match:
XP_011659730.1 (leucine-rich repeat extensin-like protein 3 [Cucumis sativus])
HSP 1 Score: 127 bits (319), Expect = 6.87e-35
Identity = 77/134 (57.46%), Postives = 88/134 (65.67%), Query Frame = 0
Query: 1 PAKFLIFVVVFHLK---SAADD--IPTPISCANCSICPYLCHPPPDPSSPTYGVPPPPPQ 60
PAK L VVVF+L SA DD +PTPISC NC+IC C PPP P + PPPP
Sbjct: 3 PAKLLALVVVFNLNTAVSATDDAAMPTPISCDNCTICQSTCSPPPSEPLP-LPLSPPPPS 62
Query: 61 QIAEPQPLPVPVAPANCPPTVVQCCQFSPPPPGGYN----NNNIYTPL-SEGCSFLKLGL 120
AEP+PLP PVAPANCPPT+VQCCQF PPPP N N+YTP+ + SFL++GL
Sbjct: 63 PYAEPEPLPFPVAPANCPPTIVQCCQFLPPPPPPPQATAVNGNVYTPIYNSSSSFLRVGL 122
Query: 121 VSVLAPVLALAAIF 124
S LAPV L AIF
Sbjct: 123 GSALAPVFGLLAIF 135
BLAST of MC11g1058 vs. NCBI nr
Match:
KGN44024.1 (hypothetical protein Csa_011878 [Cucumis sativus])
HSP 1 Score: 127 bits (319), Expect = 2.40e-34
Identity = 77/134 (57.46%), Postives = 88/134 (65.67%), Query Frame = 0
Query: 1 PAKFLIFVVVFHLK---SAADD--IPTPISCANCSICPYLCHPPPDPSSPTYGVPPPPPQ 60
PAK L VVVF+L SA DD +PTPISC NC+IC C PPP P + PPPP
Sbjct: 46 PAKLLALVVVFNLNTAVSATDDAAMPTPISCDNCTICQSTCSPPPSEPLP-LPLSPPPPS 105
Query: 61 QIAEPQPLPVPVAPANCPPTVVQCCQFSPPPPGGYN----NNNIYTPL-SEGCSFLKLGL 120
AEP+PLP PVAPANCPPT+VQCCQF PPPP N N+YTP+ + SFL++GL
Sbjct: 106 PYAEPEPLPFPVAPANCPPTIVQCCQFLPPPPPPPQATAVNGNVYTPIYNSSSSFLRVGL 165
Query: 121 VSVLAPVLALAAIF 124
S LAPV L AIF
Sbjct: 166 GSALAPVFGLLAIF 178
BLAST of MC11g1058 vs. ExPASy TrEMBL
Match:
A0A1S3CI95 (sperm mitochondrial-associated cysteine-rich protein-like OS=Cucumis melo OX=3656 GN=LOC103501284 PE=4 SV=1)
HSP 1 Score: 130 bits (326), Expect = 3.05e-36
Identity = 77/135 (57.04%), Postives = 86/135 (63.70%), Query Frame = 0
Query: 1 PAKFLIFVVVFHLKSAA---DD--IPTPISCANCSICPYLCHPPPDPSSPTYGVPPPPPQ 60
PAK L VVVF+L SA DD + TPISC NC+IC C PP P PPPPP
Sbjct: 3 PAKLLALVVVFNLNSAVSATDDAAMATPISCDNCTICQSTCRPPQSEPLPLLPPPPPPPA 62
Query: 61 QIAEPQPLPVPVAPANCPPTVVQCCQFSPPPP----GGYNNNNIYTPL--SEGCSFLKLG 120
AEP+PLP+PVAPANCPPT+VQCCQF PPPP N NIYTP+ SFL++G
Sbjct: 63 PYAEPEPLPIPVAPANCPPTIVQCCQFLPPPPPPPQATAGNGNIYTPIYNESSSSFLRVG 122
Query: 121 LVSVLAPVLALAAIF 124
L S LAPV L AIF
Sbjct: 123 LGSALAPVFGLVAIF 137
BLAST of MC11g1058 vs. ExPASy TrEMBL
Match:
A0A0A0K536 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G111300 PE=4 SV=1)
HSP 1 Score: 127 bits (319), Expect = 1.16e-34
Identity = 77/134 (57.46%), Postives = 88/134 (65.67%), Query Frame = 0
Query: 1 PAKFLIFVVVFHLK---SAADD--IPTPISCANCSICPYLCHPPPDPSSPTYGVPPPPPQ 60
PAK L VVVF+L SA DD +PTPISC NC+IC C PPP P + PPPP
Sbjct: 46 PAKLLALVVVFNLNTAVSATDDAAMPTPISCDNCTICQSTCSPPPSEPLP-LPLSPPPPS 105
Query: 61 QIAEPQPLPVPVAPANCPPTVVQCCQFSPPPPGGYN----NNNIYTPL-SEGCSFLKLGL 120
AEP+PLP PVAPANCPPT+VQCCQF PPPP N N+YTP+ + SFL++GL
Sbjct: 106 PYAEPEPLPFPVAPANCPPTIVQCCQFLPPPPPPPQATAVNGNVYTPIYNSSSSFLRVGL 165
Query: 121 VSVLAPVLALAAIF 124
S LAPV L AIF
Sbjct: 166 GSALAPVFGLLAIF 178
BLAST of MC11g1058 vs. ExPASy TrEMBL
Match:
W9QFT0 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_018218 PE=4 SV=1)
HSP 1 Score: 73.9 bits (180), Expect = 3.35e-14
Identity = 39/93 (41.94%), Postives = 55/93 (59.14%), Query Frame = 0
Query: 14 KSAADDIPTPISCANCSICPYLCHPPPDPSSPTYGVPPPPPQQIA---EPQPLPVPVAP- 73
+++ D +P+P C NC++C Y C PP +P+YG PPPPP ++ PLP P P
Sbjct: 24 ENSGDALPSPTPCFNCTMCQYPCLSPPASGNPSYGAPPPPPPELPGLPADIPLPPPQQPW 83
Query: 74 -ANCPPTVVQCCQFSPPPPGGYNNNNIYTPLSE 101
CPPT +QCCQ++PPPP G +Y P +
Sbjct: 84 QGKCPPTPIQCCQYTPPPPYG-----VYVPYNH 111
BLAST of MC11g1058 vs. ExPASy TrEMBL
Match:
A0A2P5F883 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_100520 PE=4 SV=1)
HSP 1 Score: 69.7 bits (169), Expect = 1.62e-12
Identity = 50/116 (43.10%), Postives = 60/116 (51.72%), Query Frame = 0
Query: 3 KFLIFVVV----FHLKSAADD----IPTPISCANCSICPYLCHP--PPDPSSPTYGVPPP 62
K + F+ + F+L A DD +P+P C NC+ICPYLC P PP P+YG PPP
Sbjct: 5 KLVFFIALWLSAFNLGFAGDDPGDEMPSPTGCLNCTICPYLCQPLSPPASGYPSYGPPPP 64
Query: 63 PPQQI------AEPQPLPVPVAPANCPPT-VVQCCQFSPPPP-GGYNNNNIYTPLS 100
PP A P P A CPPT VQCCQ+ PP P GGY + P S
Sbjct: 65 PPSLPEYPSYGAPPPPQSNISAQGKCPPTPAVQCCQYPPPTPYGGYVPYESHAPQS 120
BLAST of MC11g1058 vs. ExPASy TrEMBL
Match:
A0A200QK50 (Uncharacterized protein OS=Macleaya cordata OX=56857 GN=BVC80_8199g9 PE=4 SV=1)
HSP 1 Score: 69.3 bits (168), Expect = 2.04e-12
Identity = 52/104 (50.00%), Postives = 57/104 (54.81%), Query Frame = 0
Query: 1 PAKFLIFVVVFHL-----------KSAADDIPTPISCANCSICPYLCHPPPDPSS-PTYG 60
PAK LIF+V L + + D I +P C NCSICPY CH PP PS P+YG
Sbjct: 5 PAK-LIFIVALLLIISNCSCAETAEVSGDGISSPNVCQNCSICPYPCHSPPSPSGYPSYG 64
Query: 61 VPPPPPQQIAEPQPLPVPVAPANCPPT-VVQCCQFSPPP-PGGY 90
PPPPP Q A Q NCPPT VVQCC PPP P GY
Sbjct: 65 -PPPPPSQGAPVQ--------GNCPPTPVVQCCGQHPPPNPYGY 98
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
KAG7037325.1 | 7.84e-43 | 66.17 | hypothetical protein SDJN02_00950, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
KAG6607747.1 | 3.18e-42 | 65.41 | hypothetical protein SDJN03_01089, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_008463043.1 | 6.31e-36 | 57.04 | PREDICTED: sperm mitochondrial-associated cysteine-rich protein-like [Cucumis me... | [more] |
XP_011659730.1 | 6.87e-35 | 57.46 | leucine-rich repeat extensin-like protein 3 [Cucumis sativus] | [more] |
KGN44024.1 | 2.40e-34 | 57.46 | hypothetical protein Csa_011878 [Cucumis sativus] | [more] |
Match Name | E-value | Identity | Description | |
A0A1S3CI95 | 3.05e-36 | 57.04 | sperm mitochondrial-associated cysteine-rich protein-like OS=Cucumis melo OX=365... | [more] |
A0A0A0K536 | 1.16e-34 | 57.46 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G111300 PE=4 SV=1 | [more] |
W9QFT0 | 3.35e-14 | 41.94 | Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_018218 PE=4 SV=1 | [more] |
A0A2P5F883 | 1.62e-12 | 43.10 | Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_100520 PE=4 SV... | [more] |
A0A200QK50 | 2.04e-12 | 50.00 | Uncharacterized protein OS=Macleaya cordata OX=56857 GN=BVC80_8199g9 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |