MC11g0961 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC11g0961
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionVascular-related unknown protein 2
LocationMC11: 8176761 .. 8177660 (-)
RNA-Seq ExpressionMC11g0961
SyntenyMC11g0961
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCAAATCAAACTCCACCAACAATTCCCAAATAAGCTGCAGCCGAGGCCGCGACCGCAGCGCCGATGGCGATCGGTCCCCGGAGGAGAGTGGCTGGACCATCTACTTTGAAGACTTCCTCAACTCTTCCGACCATCAACAACTCAGCTCCTTCTCTTCTGATGGTGTTGCTCCTGATGATCAACCCCACGTCGCACCTGACGCTGCTTCCTCCGTGGTCGGTGACAACGACGTGGCCGTGCCTGGGTTGAGCTGCAAAGTTATGAATGGTTTCAAGAAGAGGAGGATGATGATCAAAGAGGTGTTTGTTGAAGATGAGTCCTTGGAGGATACTGCTAGCTCCCCTGTCAATAGCCCCAAGGTGTGAATTTTTTTTTTTTTTAAATGATGATTCTAAATTCCATGATATAATTAAAAGCACTTTTAAAATTTCCCACTAGATTTATAAATGAAAAAAAGTCAATGCATCAAGTGAAAAGTAATTCTAGTTCATTAAAATGAAGTATTTTTCCTTTTCAAAAAATTATCCCAAATTTCAATGCCCTTAAAATAATTTGTGAAAAAAAAAAAGAAAAATTTCTTGAGGTGGGTTTTGTTTGATGTGTTTAAACTTTCTGAACTCAGGTTCCTGAGTCAACCTACTTCAGCAAAAACCAGAAGCACAAGGAGAATCTGATAACTCCTCAGGTAATTAATAAATATTTACTAAAGTTTCAAACTTTAATCTGATTAGCAATTTTCTCGAGAAAAGAAACACTAATTTTCCGGGAAAATGGATGTTTTGTTTTGTGGGCAGGTGGAAGAAAGATCAAGAGAAATGGATTGTGAGTACACACAATTGAAGAAAAGAGGGCTTTGCTTAGTACCTTTGTCAATGGTAGTTAATTATTTGGCTGAA

mRNA sequence

ATGGCCAAATCAAACTCCACCAACAATTCCCAAATAAGCTGCAGCCGAGGCCGCGACCGCAGCGCCGATGGCGATCGGTCCCCGGAGGAGAGTGGCTGGACCATCTACTTTGAAGACTTCCTCAACTCTTCCGACCATCAACAACTCAGCTCCTTCTCTTCTGATGGTGTTGCTCCTGATGATCAACCCCACGTCGCACCTGACGCTGCTTCCTCCGTGGTCGGTGACAACGACGTGGCCGTGCCTGGGTTGAGCTGCAAAGTTATGAATGGTTTCAAGAAGAGGAGGATGATGATCAAAGAGGTGTTTGTTGAAGATGAGTCCTTGGAGGATACTGCTAGCTCCCCTGTCAATAGCCCCAAGGTTCCTGAGTCAACCTACTTCAGCAAAAACCAGAAGCACAAGGAGAATCTGATAACTCCTCAGGTGGAAGAAAGATCAAGAGAAATGGATTGTGAGTACACACAATTGAAGAAAAGAGGGCTTTGCTTAGTACCTTTGTCAATGGTAGTTAATTATTTGGCTGAA

Coding sequence (CDS)

ATGGCCAAATCAAACTCCACCAACAATTCCCAAATAAGCTGCAGCCGAGGCCGCGACCGCAGCGCCGATGGCGATCGGTCCCCGGAGGAGAGTGGCTGGACCATCTACTTTGAAGACTTCCTCAACTCTTCCGACCATCAACAACTCAGCTCCTTCTCTTCTGATGGTGTTGCTCCTGATGATCAACCCCACGTCGCACCTGACGCTGCTTCCTCCGTGGTCGGTGACAACGACGTGGCCGTGCCTGGGTTGAGCTGCAAAGTTATGAATGGTTTCAAGAAGAGGAGGATGATGATCAAAGAGGTGTTTGTTGAAGATGAGTCCTTGGAGGATACTGCTAGCTCCCCTGTCAATAGCCCCAAGGTTCCTGAGTCAACCTACTTCAGCAAAAACCAGAAGCACAAGGAGAATCTGATAACTCCTCAGGTGGAAGAAAGATCAAGAGAAATGGATTGTGAGTACACACAATTGAAGAAAAGAGGGCTTTGCTTAGTACCTTTGTCAATGGTAGTTAATTATTTGGCTGAA

Protein sequence

MAKSNSTNNSQISCSRGRDRSADGDRSPEESGWTIYFEDFLNSSDHQQLSSFSSDGVAPDDQPHVAPDAASSVVGDNDVAVPGLSCKVMNGFKKRRMMIKEVFVEDESLEDTASSPVNSPKVPESTYFSKNQKHKENLITPQVEERSREMDCEYTQLKKRGLCLVPLSMVVNYLAE
Homology
BLAST of MC11g0961 vs. ExPASy Swiss-Prot
Match: Q5BPG5 (Vascular-related unknown protein 4 OS=Arabidopsis thaliana OX=3702 GN=VUP4 PE=2 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.6e-09
Identity = 61/174 (35.06%), Postives = 80/174 (45.98%), Query Frame = 0

Query: 6   STNNSQISCSRGRDRSADGDRSPEESGWTIYFEDFLN-SSDHQQLSSFSSDGVAPDDQPH 65
           S+ N+    S+        D++PEES WT+YFEDF   SS    +  FSS  V+      
Sbjct: 3   SSMNNAFIMSKHETAMFTDDQNPEESSWTMYFEDFFEASSSIVDVGDFSSSSVS------ 62

Query: 66  VAPDAASSVVGDNDVAVPGLSCKVMNGFKKRRMMIKEV-FVEDESLEDTASSPVNSPKVP 125
              DAAS V     + V   S +  +    +R   +E+ F     LEDTASSP  SP V 
Sbjct: 63  ---DAASFVATKKTLNV---SKQEGSNLDIKRTRNREIPFGRHHDLEDTASSPSGSPNVY 122

Query: 126 ESTYFSKNQKHKENLITPQVEERSREMDCE---YTQLKKRGLCLVPLSMVVNYL 175
                  N       I    E+R   +  +      LKK+GLCLVPLSMV N+L
Sbjct: 123 SMMNLQDNNTRHGGGIVGDDEKRVSAVPNQGGLPIDLKKKGLCLVPLSMVTNFL 164

BLAST of MC11g0961 vs. ExPASy Swiss-Prot
Match: Q9LSZ3 (Vascular-related unknown protein 1 OS=Arabidopsis thaliana OX=3702 GN=VUP1 PE=2 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 1.9e-07
Identity = 56/192 (29.17%), Postives = 81/192 (42.19%), Query Frame = 0

Query: 19  DRSADGDRSPEESGWTIYFEDFLN--------SSDHQQLSSFSSDGVAPDDQPHVAPDAA 78
           D  + G    EESGWT Y +DF N         +DHQ  SS+S    +      +  DAA
Sbjct: 26  DHDSHGGDHQEESGWTTYLDDFSNQYRTTHHEENDHQDKSSYSLLATSTS----LVSDAA 85

Query: 79  SSVVGDNDVAVPGLSCKVMNGFKKRRMMIKEVFVEDESLEDTASSPVNSPKVPESTYFSK 138
           +         V     K+  G    R   K++  ED+SLEDTASSPVNSPKV    +   
Sbjct: 86  THAFSGKSFPV-NFPAKLKFG----RGRTKKI-CEDDSLEDTASSPVNSPKVSHFEHIQT 145

Query: 139 NQKHKENLITP---------------QVEERSREM--------------DCEYTQLKKRG 174
             +  E+ ++                Q++E   +               +     L+ RG
Sbjct: 146 PPRKIEDYVSSSFVMGNIRGMGDHQIQIQEGGEQKVTLMRNLIDGNNNNNNNNMDLRSRG 205

BLAST of MC11g0961 vs. ExPASy Swiss-Prot
Match: Q9C6I7 (Vascular-related unknown protein 2 OS=Arabidopsis thaliana OX=3702 GN=VUP2 PE=2 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 1.2e-04
Identity = 61/197 (30.96%), Postives = 90/197 (45.69%), Query Frame = 0

Query: 5   NSTNN--SQISCSRGRDRSADGDRSPEESGWTIYFEDFLNSSDHQQLSSFSSDGVAPDDQ 64
           NS NN   Q   S  + R    +   EES W +YFED     D + + +        D+ 
Sbjct: 3   NSVNNCVRQRVFSNHQIRMIHEEEDHEESSWIVYFEDI--DHDDEMVETEGEMTHYYDND 62

Query: 65  PHVAPDAASSV--VGDNDVAVPGLSCKVMNGFKKRRMMIKEVFVEDESL----------E 124
             +  DAAS V     N+V V   +  +    KKRR++ +    E+E L          E
Sbjct: 63  SSMISDAASPVHTTKINNV-VRRKANNINTNPKKRRIIHQHKEEEEEELQKGEEEEEDEE 122

Query: 125 DTASSPVNSPKV-------PESTYFSKNQ----KHKENLITPQVEERSREMDCEYT-QLK 176
           DTASSP N  K+        ++T + K        +   IT    +    M+ E++ +LK
Sbjct: 123 DTASSPSNKTKIFSVLDHANDNTRYGKTMDNVTSEEIGCITETGSKIKEIMNEEFSAELK 182

BLAST of MC11g0961 vs. NCBI nr
Match: XP_022139703.1 (uncharacterized protein LOC111010550 [Momordica charantia])

HSP 1 Score: 241 bits (614), Expect = 4.30e-79
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0

Query: 1   MAKSNSTNNSQISCSRGRDRSADGDRSPEESGWTIYFEDFLNSSDHQQLSSFSSDGVAPD 60
           MAKSNSTNNSQISCSRGRDRSADGDRSPEESGWTIYFEDFLNSSDHQQLSSFSSDGVAPD
Sbjct: 1   MAKSNSTNNSQISCSRGRDRSADGDRSPEESGWTIYFEDFLNSSDHQQLSSFSSDGVAPD 60

Query: 61  DQPHVAPDAASSVVGDNDVAVPGLSCKVMNGFKKRRMMIKEVFVEDESLEDTASSPVNSP 120
           DQPHVAPDAASSVVGDNDVAVPGLSCKVMNGFKKRRMMIKEVFVEDESLEDTASSPVNSP
Sbjct: 61  DQPHVAPDAASSVVGDNDVAVPGLSCKVMNGFKKRRMMIKEVFVEDESLEDTASSPVNSP 120

Query: 121 KV 122
           KV
Sbjct: 121 KV 122

BLAST of MC11g0961 vs. NCBI nr
Match: XP_038899309.1 (vascular-related unknown protein 4-like isoform X1 [Benincasa hispida])

HSP 1 Score: 180 bits (457), Expect = 2.19e-54
Identity = 117/191 (61.26%), Postives = 129/191 (67.54%), Query Frame = 0

Query: 1   MAKSNSTNNSQISCSRGRDRSADGDRSPEESGWTIYFEDFLNS--SDHQQLSSFSSDGVA 60
           MAK NSTN+S             GD SPEESGWTIYFEDFLN+  S HQ  +SFSS   +
Sbjct: 1   MAKENSTNDSLYH---------GGDPSPEESGWTIYFEDFLNTNHSSHQPPTSFSSSHFS 60

Query: 61  PDDQPHVAPDAASSVVG-----DNDVAV--PGLSCKVMNGFKKRRMMIKEVFVEDESLED 120
            D    VA DAASSV       DND A   PG   K    F K+R MIKE+FVEDE+LED
Sbjct: 61  FDQSYSVA-DAASSVPDHKLPVDNDEAALDPGFGYKDHINFFKKRKMIKELFVEDEALED 120

Query: 121 TASSPVNSPKVPESTYFSKNQKHKENLITPQVEERSREMDC------EYTQLKKRGLCLV 176
           TASSPVNSPKV +STYFSKNQKHKENL TP+V+ER REM        +Y +LKKRGLCLV
Sbjct: 121 TASSPVNSPKVCDSTYFSKNQKHKENLRTPEVDER-REMGNFVGMGNDYRELKKRGLCLV 180

BLAST of MC11g0961 vs. NCBI nr
Match: XP_031739077.1 (vascular-related unknown protein 4 [Cucumis sativus] >KGN58042.2 hypothetical protein Csa_010736 [Cucumis sativus])

HSP 1 Score: 166 bits (419), Expect = 1.39e-48
Identity = 107/197 (54.31%), Postives = 129/197 (65.48%), Query Frame = 0

Query: 1   MAKSNSTNNSQISCSRGRDRSADGDRSPEESGWTIYFEDFLNS----SDHQQLSSFSSDG 60
           MA  NSTNN+ ++          G+ SPE+SGWTIYFEDFLN+    S +Q L+SFS+  
Sbjct: 1   MANENSTNNNSLNYH--------GEESPEDSGWTIYFEDFLNTDNPNSHNQSLTSFSASS 60

Query: 61  VAPDDQPHVAPDAASSVV--------GDNDVAVPGLSCKV---MNGFKKRRMMIKEVFVE 120
               D      DAASSV          D     PG   K    +N FKKR+M IKE+FV+
Sbjct: 61  HFSLD----VTDAASSVAHRKLPHDHNDQVSEQPGFGYKDDDHINFFKKRKM-IKELFVK 120

Query: 121 DESLEDTASSPVNSPKVPESTYFSKNQKHKENLITPQVEERSREMDC------EYTQLKK 176
           DE+LEDTASSPVNSPK+  STYFSKNQKH++NLI P+VEER REMD       +YT+LKK
Sbjct: 121 DEALEDTASSPVNSPKISGSTYFSKNQKHRDNLIAPEVEER-REMDNLIGIGNDYTELKK 180

BLAST of MC11g0961 vs. NCBI nr
Match: XP_022937320.1 (vascular-related unknown protein 4-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 165 bits (418), Expect = 1.80e-48
Identity = 97/167 (58.08%), Postives = 114/167 (68.26%), Query Frame = 0

Query: 24  GDRSPEESGWTIYFEDFLNSSD--HQQLSSFSSDGVAPDDQPHVAPDAASSVVG------ 83
           GD+S EESGWTIYFEDFLN+    +Q  +SFSS  ++PD    +A DAASSVV       
Sbjct: 15  GDQSSEESGWTIYFEDFLNNHHPTNQPPTSFSSFPLSPDQSYPIA-DAASSVVDHKLLEN 74

Query: 84  -DNDVAVPGLSCKVMNGFKKRRMMIKEVFVEDESLEDTASSPVNSPKVPESTYFSKNQKH 143
            D     PG SCK    F K+R MI EVFV+DE+LEDTASSPVNSPKV +S YFSKN +H
Sbjct: 75  HDGAAMDPGFSCKDHINFFKKRKMIYEVFVDDEALEDTASSPVNSPKVCDSNYFSKNPRH 134

Query: 144 KENLITPQVEERSREMDC-----EYTQLKKRGLCLVPLSMVVNYLAE 176
           K  LITPQV ER    D      EYT+LKKRGLCLVP SM++NY+ +
Sbjct: 135 KGKLITPQVHERREIGDLIGIGSEYTELKKRGLCLVPFSMILNYMDQ 180

BLAST of MC11g0961 vs. NCBI nr
Match: XP_022976591.1 (vascular-related unknown protein 4-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 164 bits (414), Expect = 7.25e-48
Identity = 98/167 (58.68%), Postives = 117/167 (70.06%), Query Frame = 0

Query: 24  GDRSPEESGWTIYFEDFLNSSD--HQQLSSFSSDGVAPDDQPHVAPDAASSVV-----GD 83
           GD+S EESGWTIYFEDFLN+    +Q  +SFSS   +PD    VA DAASSVV     G+
Sbjct: 15  GDQSSEESGWTIYFEDFLNNHHPTNQPPTSFSSYPPSPDQSYPVA-DAASSVVDHKLLGN 74

Query: 84  NDVAV--PGLSCKVMNGFKKRRMMIKEVFVEDESLEDTASSPVNSPKVPESTYFSKNQKH 143
           +D A   PG SCK    F K+R MI E+ V+DE+LEDTASSPVNSPKV +S YFSKN +H
Sbjct: 75  HDGAAMGPGFSCKDHINFFKKRKMIYELLVDDEALEDTASSPVNSPKVCDSNYFSKNPRH 134

Query: 144 KENLITPQVEERSREMDC-----EYTQLKKRGLCLVPLSMVVNYLAE 176
           K  LITPQV+ER    D      EYT+LKKRGLCLVP SM++NY+ +
Sbjct: 135 KGKLITPQVDERRDIGDLIGIGSEYTELKKRGLCLVPFSMIINYMDQ 180

BLAST of MC11g0961 vs. ExPASy TrEMBL
Match: A0A6J1CGB1 (uncharacterized protein LOC111010550 OS=Momordica charantia OX=3673 GN=LOC111010550 PE=4 SV=1)

HSP 1 Score: 241 bits (614), Expect = 2.08e-79
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0

Query: 1   MAKSNSTNNSQISCSRGRDRSADGDRSPEESGWTIYFEDFLNSSDHQQLSSFSSDGVAPD 60
           MAKSNSTNNSQISCSRGRDRSADGDRSPEESGWTIYFEDFLNSSDHQQLSSFSSDGVAPD
Sbjct: 1   MAKSNSTNNSQISCSRGRDRSADGDRSPEESGWTIYFEDFLNSSDHQQLSSFSSDGVAPD 60

Query: 61  DQPHVAPDAASSVVGDNDVAVPGLSCKVMNGFKKRRMMIKEVFVEDESLEDTASSPVNSP 120
           DQPHVAPDAASSVVGDNDVAVPGLSCKVMNGFKKRRMMIKEVFVEDESLEDTASSPVNSP
Sbjct: 61  DQPHVAPDAASSVVGDNDVAVPGLSCKVMNGFKKRRMMIKEVFVEDESLEDTASSPVNSP 120

Query: 121 KV 122
           KV
Sbjct: 121 KV 122

BLAST of MC11g0961 vs. ExPASy TrEMBL
Match: A0A6J1FG95 (Uncharacterized protein OS=Cucurbita moschata OX=3662 GN=LOC111443646 PE=4 SV=1)

HSP 1 Score: 165 bits (418), Expect = 8.70e-49
Identity = 97/167 (58.08%), Postives = 114/167 (68.26%), Query Frame = 0

Query: 24  GDRSPEESGWTIYFEDFLNSSD--HQQLSSFSSDGVAPDDQPHVAPDAASSVVG------ 83
           GD+S EESGWTIYFEDFLN+    +Q  +SFSS  ++PD    +A DAASSVV       
Sbjct: 15  GDQSSEESGWTIYFEDFLNNHHPTNQPPTSFSSFPLSPDQSYPIA-DAASSVVDHKLLEN 74

Query: 84  -DNDVAVPGLSCKVMNGFKKRRMMIKEVFVEDESLEDTASSPVNSPKVPESTYFSKNQKH 143
            D     PG SCK    F K+R MI EVFV+DE+LEDTASSPVNSPKV +S YFSKN +H
Sbjct: 75  HDGAAMDPGFSCKDHINFFKKRKMIYEVFVDDEALEDTASSPVNSPKVCDSNYFSKNPRH 134

Query: 144 KENLITPQVEERSREMDC-----EYTQLKKRGLCLVPLSMVVNYLAE 176
           K  LITPQV ER    D      EYT+LKKRGLCLVP SM++NY+ +
Sbjct: 135 KGKLITPQVHERREIGDLIGIGSEYTELKKRGLCLVPFSMILNYMDQ 180

BLAST of MC11g0961 vs. ExPASy TrEMBL
Match: A0A6J1IHA8 (Uncharacterized protein OS=Cucurbita maxima OX=3661 GN=LOC111476942 PE=4 SV=1)

HSP 1 Score: 164 bits (414), Expect = 3.51e-48
Identity = 98/167 (58.68%), Postives = 117/167 (70.06%), Query Frame = 0

Query: 24  GDRSPEESGWTIYFEDFLNSSD--HQQLSSFSSDGVAPDDQPHVAPDAASSVV-----GD 83
           GD+S EESGWTIYFEDFLN+    +Q  +SFSS   +PD    VA DAASSVV     G+
Sbjct: 15  GDQSSEESGWTIYFEDFLNNHHPTNQPPTSFSSYPPSPDQSYPVA-DAASSVVDHKLLGN 74

Query: 84  NDVAV--PGLSCKVMNGFKKRRMMIKEVFVEDESLEDTASSPVNSPKVPESTYFSKNQKH 143
           +D A   PG SCK    F K+R MI E+ V+DE+LEDTASSPVNSPKV +S YFSKN +H
Sbjct: 75  HDGAAMGPGFSCKDHINFFKKRKMIYELLVDDEALEDTASSPVNSPKVCDSNYFSKNPRH 134

Query: 144 KENLITPQVEERSREMDC-----EYTQLKKRGLCLVPLSMVVNYLAE 176
           K  LITPQV+ER    D      EYT+LKKRGLCLVP SM++NY+ +
Sbjct: 135 KGKLITPQVDERRDIGDLIGIGSEYTELKKRGLCLVPFSMIINYMDQ 180

BLAST of MC11g0961 vs. ExPASy TrEMBL
Match: A0A6J1J018 (Uncharacterized protein OS=Cucurbita maxima OX=3661 GN=LOC111480691 PE=4 SV=1)

HSP 1 Score: 162 bits (410), Expect = 1.33e-47
Identity = 105/191 (54.97%), Postives = 128/191 (67.02%), Query Frame = 0

Query: 1   MAKSNSTNNSQISCSRGRDRSADGDRSPEESGWTIYFEDFLNSSDHQQLSSF---SSDGV 60
           MAK NST+NS             G++SPEESGWTIYF+DFLN++ +   + +   SS  +
Sbjct: 1   MAKENSTSNSVCH---------GGNQSPEESGWTIYFQDFLNTNTNHHPAHYPASSSSHM 60

Query: 61  APDDQPHVAPDAASSVV-----GDNDVAV--PGLSCKVMNGFKKRRMMIKEVFVEDESLE 120
           +PD    VA DAASS+      GDND AV  P LSCK      KRR MIKE+ VEDE+LE
Sbjct: 61  SPDQSYSVA-DAASSIADHKLPGDNDRAVMDPNLSCKDHINLFKRRKMIKELLVEDEALE 120

Query: 121 DTASSPVNSPKVPESTYFSKNQKHKENLITPQVEERSREM-----DCEYTQLKKRGLCLV 176
           DTASSPVNSPKV +ST+FSK+ +H EN I  +V ER REM     + EY +LKKRGLCLV
Sbjct: 121 DTASSPVNSPKVSDSTFFSKSSRHHENQI--KVNER-REMGLVGIESEYKELKKRGLCLV 178

BLAST of MC11g0961 vs. ExPASy TrEMBL
Match: A0A6J1FLD8 (Uncharacterized protein OS=Cucurbita moschata OX=3662 GN=LOC111446469 PE=4 SV=1)

HSP 1 Score: 159 bits (401), Expect = 2.81e-46
Identity = 103/188 (54.79%), Postives = 122/188 (64.89%), Query Frame = 0

Query: 1   MAKSNSTNNSQISCSRGRDRSADGDRSPEESGWTIYFEDFLNSSDHQQLSSFSSDGVAPD 60
           MAK NST+NS             GD+SPEESGWTIYF+DFLN++      + SS   +PD
Sbjct: 1   MAKENSTSNSVCH---------GGDQSPEESGWTIYFQDFLNTNHPAHYPASSSSHPSPD 60

Query: 61  DQPHVAPDAASSVV-----GDNDVAV--PGLSCKVMNGFKKRRMMIKEVFVEDESLEDTA 120
               VA DAASS+      GD++ A   P LSCK      KRR MIKE+ VEDE+LEDTA
Sbjct: 61  QSYSVA-DAASSIADHKLPGDDNRAAMDPNLSCKDHINLFKRRKMIKELLVEDEALEDTA 120

Query: 121 SSPVNSPKVPESTYFSKNQKHKENLITPQVEERSREMDC-----EYTQLKKRGLCLVPLS 176
           SSPVNSPKV ++T+FSKN  H EN I  +V ER REM       EY +LKKRGLCLVPL 
Sbjct: 121 SSPVNSPKVSDATFFSKNSGHNENQI--KVNER-REMGLVGIGNEYKELKKRGLCLVPLC 175

BLAST of MC11g0961 vs. TAIR 10
Match: AT5G54790.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G50930.1); Has 53 Blast hits to 53 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 64.3 bits (155), Expect = 1.1e-10
Identity = 61/174 (35.06%), Postives = 80/174 (45.98%), Query Frame = 0

Query: 6   STNNSQISCSRGRDRSADGDRSPEESGWTIYFEDFLN-SSDHQQLSSFSSDGVAPDDQPH 65
           S+ N+    S+        D++PEES WT+YFEDF   SS    +  FSS  V+      
Sbjct: 3   SSMNNAFIMSKHETAMFTDDQNPEESSWTMYFEDFFEASSSIVDVGDFSSSSVS------ 62

Query: 66  VAPDAASSVVGDNDVAVPGLSCKVMNGFKKRRMMIKEV-FVEDESLEDTASSPVNSPKVP 125
              DAAS V     + V   S +  +    +R   +E+ F     LEDTASSP  SP V 
Sbjct: 63  ---DAASFVATKKTLNV---SKQEGSNLDIKRTRNREIPFGRHHDLEDTASSPSGSPNVY 122

Query: 126 ESTYFSKNQKHKENLITPQVEERSREMDCE---YTQLKKRGLCLVPLSMVVNYL 175
                  N       I    E+R   +  +      LKK+GLCLVPLSMV N+L
Sbjct: 123 SMMNLQDNNTRHGGGIVGDDEKRVSAVPNQGGLPIDLKKKGLCLVPLSMVTNFL 164

BLAST of MC11g0961 vs. TAIR 10
Match: AT3G21710.2 (unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 57.4 bits (137), Expect = 1.4e-08
Identity = 56/192 (29.17%), Postives = 81/192 (42.19%), Query Frame = 0

Query: 19  DRSADGDRSPEESGWTIYFEDFLN--------SSDHQQLSSFSSDGVAPDDQPHVAPDAA 78
           D  + G    EESGWT Y +DF N         +DHQ  SS+S    +      +  DAA
Sbjct: 26  DHDSHGGDHQEESGWTTYLDDFSNQYRTTHHEENDHQDKSSYSLLATSTS----LVSDAA 85

Query: 79  SSVVGDNDVAVPGLSCKVMNGFKKRRMMIKEVFVEDESLEDTASSPVNSPKVPESTYFSK 138
           +         V     K+  G    R   K++  ED+SLEDTASSPVNSPKV    +   
Sbjct: 86  THAFSGKSFPV-NFPAKLKFG----RGRTKKI-CEDDSLEDTASSPVNSPKVSHFEHIQT 145

Query: 139 NQKHKENLITP---------------QVEERSREM--------------DCEYTQLKKRG 174
             +  E+ ++                Q++E   +               +     L+ RG
Sbjct: 146 PPRKIEDYVSSSFVMGNIRGMGDHQIQIQEGGEQKVTLMRNLIDGNNNNNNNNMDLRSRG 205

BLAST of MC11g0961 vs. TAIR 10
Match: AT3G21710.1 (unknown protein; Has 42 Blast hits to 42 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 51.6 bits (122), Expect = 7.5e-07
Identity = 47/131 (35.88%), Postives = 60/131 (45.80%), Query Frame = 0

Query: 19  DRSADGDRSPEESGWTIYFEDFLN--------SSDHQQLSSFSSDGVAPDDQPHVAPDAA 78
           D  + G    EESGWT Y +DF N         +DHQ  SS+S    +      +  DAA
Sbjct: 26  DHDSHGGDHQEESGWTTYLDDFSNQYRTTHHEENDHQDKSSYSLLATSTS----LVSDAA 85

Query: 79  SSVVGDNDVAVPGLSCKVMNGFKKRRMMIKEVFVEDESLEDTASSPVNSPKVPESTYFSK 138
           +         V     K+  G    R   K++  ED+SLEDTASSPVNSPKV        
Sbjct: 86  THAFSGKSFPV-NFPAKLKFG----RGRTKKI-CEDDSLEDTASSPVNSPKV-------- 136

Query: 139 NQKHKENLITP 142
              H E++ TP
Sbjct: 146 --SHFEHIQTP 136

BLAST of MC11g0961 vs. TAIR 10
Match: AT1G50930.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G20557.1); Has 215 Blast hits to 213 proteins in 63 species: Archae - 0; Bacteria - 2; Metazoa - 83; Fungi - 10; Plants - 45; Viruses - 5; Other Eukaryotes - 70 (source: NCBI BLink). )

HSP 1 Score: 48.1 bits (113), Expect = 8.2e-06
Identity = 61/197 (30.96%), Postives = 90/197 (45.69%), Query Frame = 0

Query: 5   NSTNN--SQISCSRGRDRSADGDRSPEESGWTIYFEDFLNSSDHQQLSSFSSDGVAPDDQ 64
           NS NN   Q   S  + R    +   EES W +YFED     D + + +        D+ 
Sbjct: 3   NSVNNCVRQRVFSNHQIRMIHEEEDHEESSWIVYFEDI--DHDDEMVETEGEMTHYYDND 62

Query: 65  PHVAPDAASSV--VGDNDVAVPGLSCKVMNGFKKRRMMIKEVFVEDESL----------E 124
             +  DAAS V     N+V V   +  +    KKRR++ +    E+E L          E
Sbjct: 63  SSMISDAASPVHTTKINNV-VRRKANNINTNPKKRRIIHQHKEEEEEELQKGEEEEEDEE 122

Query: 125 DTASSPVNSPKV-------PESTYFSKNQ----KHKENLITPQVEERSREMDCEYT-QLK 176
           DTASSP N  K+        ++T + K        +   IT    +    M+ E++ +LK
Sbjct: 123 DTASSPSNKTKIFSVLDHANDNTRYGKTMDNVTSEEIGCITETGSKIKEIMNEEFSAELK 182

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q5BPG51.6e-0935.06Vascular-related unknown protein 4 OS=Arabidopsis thaliana OX=3702 GN=VUP4 PE=2 ... [more]
Q9LSZ31.9e-0729.17Vascular-related unknown protein 1 OS=Arabidopsis thaliana OX=3702 GN=VUP1 PE=2 ... [more]
Q9C6I71.2e-0430.96Vascular-related unknown protein 2 OS=Arabidopsis thaliana OX=3702 GN=VUP2 PE=2 ... [more]
Match NameE-valueIdentityDescription
XP_022139703.14.30e-79100.00uncharacterized protein LOC111010550 [Momordica charantia][more]
XP_038899309.12.19e-5461.26vascular-related unknown protein 4-like isoform X1 [Benincasa hispida][more]
XP_031739077.11.39e-4854.31vascular-related unknown protein 4 [Cucumis sativus] >KGN58042.2 hypothetical pr... [more]
XP_022937320.11.80e-4858.08vascular-related unknown protein 4-like isoform X1 [Cucurbita moschata][more]
XP_022976591.17.25e-4858.68vascular-related unknown protein 4-like isoform X1 [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
A0A6J1CGB12.08e-79100.00uncharacterized protein LOC111010550 OS=Momordica charantia OX=3673 GN=LOC111010... [more]
A0A6J1FG958.70e-4958.08Uncharacterized protein OS=Cucurbita moschata OX=3662 GN=LOC111443646 PE=4 SV=1[more]
A0A6J1IHA83.51e-4858.68Uncharacterized protein OS=Cucurbita maxima OX=3661 GN=LOC111476942 PE=4 SV=1[more]
A0A6J1J0181.33e-4754.97Uncharacterized protein OS=Cucurbita maxima OX=3661 GN=LOC111480691 PE=4 SV=1[more]
A0A6J1FLD82.81e-4654.79Uncharacterized protein OS=Cucurbita moschata OX=3662 GN=LOC111446469 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G54790.11.1e-1035.06unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT3G21710.21.4e-0829.17unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae ... [more]
AT3G21710.17.5e-0735.88unknown protein; Has 42 Blast hits to 42 proteins in 10 species: Archae - 0; Bac... [more]
AT1G50930.18.2e-0630.96unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 108..136
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 47..71
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..30
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..17
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 111..136
NoneNo IPR availablePANTHERPTHR33974:SF2VASCULAR-RELATED UNKNOWN PROTEIN 1-RELATEDcoord: 5..174
IPR039280VASCULAR-RELATED UNKNOWN PROTEINPANTHERPTHR33974VASCULAR-RELATED UNKNOWN PROTEIN 1-RELATEDcoord: 5..174

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC11g0961.1MC11g0961.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010089 xylem development