MC11g0861 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC11g0861
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	PRA1 family protein
Location	MC11: 7302056 .. 7304633 (+)
RNA-Seq Expression	MC11g0861
Synteny	MC11g0861

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGTGTTTCTTTTTTTATTTTTTAGCATTCAAAGATCGATGAAATATATTTTAATCCAGTTGGGTAATAAATACATCATACTCTCGTGTTGAGAATGACAATAACATTGATAAGATAGATTAAAATAATAATGGAAGGTTCAAACACAATCGACAGACCCTCCATAAAATATATATGTAGACTATAGTTCTGCAAATTGAAGAACAAAAAAATCCGAACTTTATAAGTTTAAACACAAACCCAATTCGGGTTTTGATCTTGCAATATAATCCTTTTTGTCTGTTTTGTTCTGAATCCGTGTTTTTGTCGTTAGCAATGAGTTTCTCATCCAACCCACTCTCCCTCAGCGTTCCAGACGGCGCCTTCGATTCATGGCTTCGCGATTCCGGCTACCTTGAAATTCTCGATCAGCGCACCTCCGACCTCCACCGCAATTCCTCCGCCGCCGCCCCCGCCGGACCCACCTCCTCCTTCCCTTCTTCTTCCGCCTCCTCCACCGCCCCTCTTGCCACCGGTTTCTTCATCTCCCTCTTCTCTCGCGTCGGCACCCTCCTCTCCCTTTTCACCCTCAATCCCTTTGCCAAGCTCTCTGCTGCGGATTTCTCTGGCCAGACCCCCTCCTGGACTTCTGCCTTTGTTGGGCTTTTCGATTCGTACTCGTTTCCTTCGTCGCCGGCCCAAGCTCGTCTTCGAGTCCACGAGAATGCTAAACGCTATGCTCGCAACTACGCCTCCCTCTTTGTTCTCTTCTTCGTCTGCACGCTGTACGTTTTACCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCTCCCCCTCTCTCTCTCGTTATTGGTGTTTGTTGATGTGTTGAAGTGCTGTGGATTCCGTTCTTGAAGTTGAAGTTGTTGTTTGCGAATTGGGTTCTGTTTGTTTTTTCATGAAGGGGAGGAAAAAGAGCACCTCTATGGAAAATTCAATTTGTTAAGAGCATCTCCTTTAGATATGATAATGGGTTTTGGTGGTTTAATTGGGTTTATGATGCTGATGGGATCAAAAAGTTTTGGGGCCTACTCGCATGCTAATCCCAATCTCAAACCTATAGAAAGAATTATGACAATACTTTTAAACTCTGTACAATGGAGACTGTGACTTTCCTGAATATGAATACCAATATCTCCCTTTATGTTTGCCATTTTATTGTTTCTTGAGTTTAAGTTCTCTGGTGGGGATGATTTCAGGTACCAGATGCCTCTTGCCCTTGTTGGACTGATATCATGTTTAGCACTTTGGGACGTTGTTAAGTTTTGTGGCGATAGGTGGGGATTAGACAGATATCCAGTTGTTTGGCAGTGTTTGGTTCGCATTGCCCAATGTGGTAAGTTATTAATGTTTTAAGCCAGACCGTTCATTTACATTTCTGAGAAGTTTCTCCAAAATCTTCTCTTTAAACATGTATTAATTGATTGGTTAAGTTTTTTTTCCTGGTTGCATTATTCCTTAAGAGGAATTCACTTGAAAAATGATCATATGATATACACCTATTTCCAGACATCAGTAGATCTACTGGTTTGGATCCCAAATTATAAGTAGAAACTGGATTTCGCATTTTTGATAGAGCATTTCTATATACTCTATTGCTGCTTGTTGAATGGTTATTCTTTTTCCAATTCCATTTGGCTTAGATTACAAGTCCTAACATTATCGTTTTCTTAGTTCACGACGACTGAGAACTTTAGCTCGGTTGTCTAGAGTTGTGAGAAATTAGCCAATGTGTTAGCCGAGTGTAGCATAAGCATAATACCCGCATGATTGATCCCATAAAAGTTTTACGTACTACTTCAATTTGCTATTTGGAACCTTTGGGATGTTTTCAAAACTTAGCTTCTTTACGAGAACAGCTTTTGTGGAATTCTTGGAAGTAAAATTATTACTGCTGGATCTTTCTGCATTTATTTTTCAATTCCATTGAACTGCTTTTGGTAGTTAATTACATCAGAAATCTTATTTAACCCTTTTTTTTTTCCAAATACTTACCTGAGTACAATGTTTGCAGTGACTGTCATCATTCTTTTGTACTCCAACTTTCAAATGGCGCTCTTCTGTGCACTTGGCATTGGATACGCAGGTGACTCCAAAACATTCCTATGCTATGTTATAGAGTTTATCTTTATCGGTTGATCTCATCGTTTGAAATCTTGACAGGCATGGTTTTTCATGCTGCATTTCGGAAGCTGACTCTTGCCAAGCCACCATCTACTGGAAATAGAAAAATAGCCAGCTTCAGGCAACAATATTCGTAGTCTTATACATGGGGTATGTTTAATCCAGTCACTGCTACGCATCAACAACCAATTCTCTGGGCTATGGCTAACACATGCCCTGCAGGGGGCACCTTGCCCTTGCTGGCAAGTTCATACTATGGCATGGGGTTCTCTGATGATCCTATTGCCCAAGAGTTTCATGGCTTCGTCTTTCAGTGTTAGA

mRNA sequence

GTGTGTTTCTTTTTTTATTTTTTAGCATTCAAAGATCGATGAAATATATTTTAATCCAGTTGGGTAATAAATACATCATACTCTCGTGTTGAGAATGACAATAACATTGATAAGATAGATTAAAATAATAATGGAAGGTTCAAACACAATCGACAGACCCTCCATAAAATATATATGTAGACTATAGTTCTGCAAATTGAAGAACAAAAAAATCCGAACTTTATAAGTTTAAACACAAACCCAATTCGGGTTTTGATCTTGCAATATAATCCTTTTTGTCTGTTTTGTTCTGAATCCGTGTTTTTGTCGTTAGCAATGAGTTTCTCATCCAACCCACTCTCCCTCAGCGTTCCAGACGGCGCCTTCGATTCATGGCTTCGCGATTCCGGCTACCTTGAAATTCTCGATCAGCGCACCTCCGACCTCCACCGCAATTCCTCCGCCGCCGCCCCCGCCGGACCCACCTCCTCCTTCCCTTCTTCTTCCGCCTCCTCCACCGCCCCTCTTGCCACCGGTTTCTTCATCTCCCTCTTCTCTCGCGTCGGCACCCTCCTCTCCCTTTTCACCCTCAATCCCTTTGCCAAGCTCTCTGCTGCGGATTTCTCTGGCCAGACCCCCTCCTGGACTTCTGCCTTTGTTGGGCTTTTCGATTCGTACTCGTTTCCTTCGTCGCCGGCCCAAGCTCGTCTTCGAGTCCACGAGAATGCTAAACGCTATGCTCGCAACTACGCCTCCCTCTTTGTTCTCTTCTTCGTCTGCACGCTGTACCAGATGCCTCTTGCCCTTGTTGGACTGATATCATGTTTAGCACTTTGGGACGTTGTTAAGTTTTGTGGCGATAGGTGGGGATTAGACAGATATCCAGTTGTTTGGCAGTGTTTGGTTCGCATTGCCCAATGTGTGACTGTCATCATTCTTTTGTACTCCAACTTTCAAATGGCGCTCTTCTGTGCACTTGGCATTGGATACGCAGGCATGGTTTTTCATGCTGCATTTCGGAAGCTGACTCTTGCCAAGCCACCATCTACTAATATTCGTAGTCTTATACATGGGGTATGTTTAATCCAGTCACTGCTACGCATCAACAACCAATTCTCTGGGCTATGGCTAACACATGCCCTGCAGGGGGCACCTTGCCCTTGCTGGCAAGTTCATACTATGGCATGGGGTTCTCTGATGATCCTATTGCCCAAGAGTTTCATGGCTTCGTCTTTCAGTGTTAGA

Coding sequence (CDS)

ATGAGTTTCTCATCCAACCCACTCTCCCTCAGCGTTCCAGACGGCGCCTTCGATTCATGGCTTCGCGATTCCGGCTACCTTGAAATTCTCGATCAGCGCACCTCCGACCTCCACCGCAATTCCTCCGCCGCCGCCCCCGCCGGACCCACCTCCTCCTTCCCTTCTTCTTCCGCCTCCTCCACCGCCCCTCTTGCCACCGGTTTCTTCATCTCCCTCTTCTCTCGCGTCGGCACCCTCCTCTCCCTTTTCACCCTCAATCCCTTTGCCAAGCTCTCTGCTGCGGATTTCTCTGGCCAGACCCCCTCCTGGACTTCTGCCTTTGTTGGGCTTTTCGATTCGTACTCGTTTCCTTCGTCGCCGGCCCAAGCTCGTCTTCGAGTCCACGAGAATGCTAAACGCTATGCTCGCAACTACGCCTCCCTCTTTGTTCTCTTCTTCGTCTGCACGCTGTACCAGATGCCTCTTGCCCTTGTTGGACTGATATCATGTTTAGCACTTTGGGACGTTGTTAAGTTTTGTGGCGATAGGTGGGGATTAGACAGATATCCAGTTGTTTGGCAGTGTTTGGTTCGCATTGCCCAATGTGTGACTGTCATCATTCTTTTGTACTCCAACTTTCAAATGGCGCTCTTCTGTGCACTTGGCATTGGATACGCAGGCATGGTTTTTCATGCTGCATTTCGGAAGCTGACTCTTGCCAAGCCACCATCTACTAATATTCGTAGTCTTATACATGGGGTATGTTTAATCCAGTCACTGCTACGCATCAACAACCAATTCTCTGGGCTATGGCTAACACATGCCCTGCAGGGGGCACCTTGCCCTTGCTGGCAAGTTCATACTATGGCATGGGGTTCTCTGATGATCCTATTGCCCAAGAGTTTCATGGCTTCGTCTTTCAGTGTTAGA

Protein sequence

MSFSSNPLSLSVPDGAFDSWLRDSGYLEILDQRTSDLHRNSSAAAPAGPTSSFPSSSASSTAPLATGFFISLFSRVGTLLSLFTLNPFAKLSAADFSGQTPSWTSAFVGLFDSYSFPSSPAQARLRVHENAKRYARNYASLFVLFFVCTLYQMPLALVGLISCLALWDVVKFCGDRWGLDRYPVVWQCLVRIAQCVTVIILLYSNFQMALFCALGIGYAGMVFHAAFRKLTLAKPPSTNIRSLIHGVCLIQSLLRINNQFSGLWLTHALQGAPCPCWQVHTMAWGSLMILLPKSFMASSFSVR

Homology

[Close]

BLAST of MC11g0861 vs. ExPASy Swiss-Prot
Match: Q8LFP1 (PRA1 family protein H OS=Arabidopsis thaliana OX=3702 GN=PRA1H PE=2 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 4.7e-70
Identity = 140/244 (57.38%), Postives = 178/244 (72.95%), Query Frame = 0


Query: 1   MSFSSNPLSLSVPDGAFDSWLRDSGYLEILDQRTSDLHRNSSAAAPAGPTSSFPSSSASS 60
           M+FS NPLSLSVPD AF+SWLRDSGYLE+LD      HR S+AAA A  ++S  SS+A++
Sbjct: 1   MAFSPNPLSLSVPDPAFESWLRDSGYLELLD------HRTSAAAAAASSSASVSSSAAAT 60

Query: 61  TA-------PLATGFFISLFSRVGTLLSLFTLNPFAKLSAADFSGQTPSWTSAFVGLFDS 120
           +A        +  GFF SL SR+ T+ SL T+NPF+KLSA DFSG T  WT+ F+G  DS
Sbjct: 61  SAASDDVVSSITGGFFASLLSRLVTVSSLLTINPFSKLSADDFSGDTTPWTTGFIGNCDS 120

Query: 121 YSFPSSPAQARLRVHENAKRYARNYASLFVLFFVCTLYQMPLALVGLISCLALWDVVKFC 180
           YSFPSS  QAR+RVHEN KR+ARNYA+LF++FF C LYQMPLALVGL+  LALW++ K+C
Sbjct: 121 YSFPSSSQQARMRVHENIKRFARNYATLFIVFFACALYQMPLALVGLLGSLALWELFKYC 180

Query: 181 GDRWGLDRYPVVWQCLVRIAQCVTVIILLYSNFQMALFCALGIGYAGMVFHAAFRKLTLA 238
            D+W  DR+P + +  + I QC T ++L + N QMALF AL I Y+ M+ HA FRKLT +
Sbjct: 181 SDKWKFDRHPSMRKLSIGIGQCATAVLLTFLNVQMALFSALAISYSVMILHAGFRKLTPS 238

[Close]

BLAST of MC11g0861 vs. NCBI nr
Match: KAG6591944.1 (PRA1 family protein H, partial [Cucurbita argyrosperma subsp. sororia] >KAG7024817.1 PRA1 family protein H [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 404 bits (1039), Expect = 6.33e-140
Identity = 202/238 (84.87%), Postives = 218/238 (91.60%), Query Frame = 0


Query: 1   MSFSSNPLSLSVPDGAFDSWLRDSGYLEILDQRTSDLHRNSSAAAPAGPTSSFPSSSASS 60
           MSFSSNPLSLSVPD AFDSWLRDSGYLEILDQRTSDLHR+SSA A A PT   P +    
Sbjct: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSATAAAAPTRPTPIA---- 60

Query: 61  TAPLATGFFISLFSRVGTLLSLFTLNPFAKLSAADFSGQTPSWTSAFVGLFDSYSFPSSP 120
            APLATGFFIS FSR+GTLLS+FTLNPFAKLSAADF+G TPSWTS FVG F+SYSFPSSP
Sbjct: 61  VAPLATGFFISFFSRIGTLLSVFTLNPFAKLSAADFAGPTPSWTSGFVGFFESYSFPSSP 120

Query: 121 AQARLRVHENAKRYARNYASLFVLFFVCTLYQMPLALVGLISCLALWDVVKFCGDRWGLD 180
           AQARLRVHENAKRYARNYASLFVLFFVCTLYQMPLAL+GL+SCLALWD+VKFCGDRWGLD
Sbjct: 121 AQARLRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLVSCLALWDIVKFCGDRWGLD 180

Query: 181 RYPVVWQCLVRIAQCVTVIILLYSNFQMALFCALGIGYAGMVFHAAFRKLTLAKPPST 238
           +YPVVWQCLVRIAQCVTVIILL+SNFQMA+FCALG+GY GM+ HAAFRKLTL +PPS+
Sbjct: 181 KYPVVWQCLVRIAQCVTVIILLFSNFQMAIFCALGVGYTGMILHAAFRKLTLTRPPSS 234

[Close]

BLAST of MC11g0861 vs. NCBI nr
Match: XP_038898448.1 (PRA1 family protein H [Benincasa hispida])

HSP 1 Score: 404 bits (1037), Expect = 1.28e-139
Identity = 204/237 (86.08%), Postives = 218/237 (91.98%), Query Frame = 0


Query: 1   MSFSSNPLSLSVPDGAFDSWLRDSGYLEILDQRTSDLHRNSSAAAPAGPTSSFPSSSASS 60
           MSFS NPLSLSVPD AFDSWLRDSGYLEILDQRTSDLHR+SSA A A PT   P+++A  
Sbjct: 1   MSFSPNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSAPAAAAPTRPTPAAAA-- 60

Query: 61  TAPLATGFFISLFSRVGTLLSLFTLNPFAKLSAADFSGQTPSWTSAFVGLFDSYSFPSSP 120
             PLATGFFISLFSR+GTLLS+FTLNPFAKLSAADFSG TPSWTS FVG F+SYSFPSSP
Sbjct: 61  --PLATGFFISLFSRMGTLLSIFTLNPFAKLSAADFSGPTPSWTSGFVGFFESYSFPSSP 120

Query: 121 AQARLRVHENAKRYARNYASLFVLFFVCTLYQMPLALVGLISCLALWDVVKFCGDRWGLD 180
           AQARLRVHENAKRYARNYASLFVLFFVCTLYQMPLAL+GLISCLALWDVVKFCGDRWGLD
Sbjct: 121 AQARLRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDVVKFCGDRWGLD 180

Query: 181 RYPVVWQCLVRIAQCVTVIILLYSNFQMALFCALGIGYAGMVFHAAFRKLTLAKPPS 237
           +YPV+WQCLVRIAQCVTVIILL+ NFQMA+FCALGIGY GM+ HAAFRKLTL KPP+
Sbjct: 181 KYPVLWQCLVRIAQCVTVIILLFCNFQMAIFCALGIGYTGMILHAAFRKLTLTKPPA 233

[Close]

BLAST of MC11g0861 vs. NCBI nr
Match: XP_022935725.1 (PRA1 family protein H-like [Cucurbita moschata] >XP_022935726.1 PRA1 family protein H-like [Cucurbita moschata] >XP_022935727.1 PRA1 family protein H-like [Cucurbita moschata] >XP_022935728.1 PRA1 family protein H-like [Cucurbita moschata])

HSP 1 Score: 402 bits (1034), Expect = 3.65e-139
Identity = 201/238 (84.45%), Postives = 217/238 (91.18%), Query Frame = 0


Query: 1   MSFSSNPLSLSVPDGAFDSWLRDSGYLEILDQRTSDLHRNSSAAAPAGPTSSFPSSSASS 60
           MSFSSNPLSLSVPD AFDSWLRDSGYLEILDQRTSDLHR+SSA A   PT   P +    
Sbjct: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSATAATAPTRPTPIA---- 60

Query: 61  TAPLATGFFISLFSRVGTLLSLFTLNPFAKLSAADFSGQTPSWTSAFVGLFDSYSFPSSP 120
            APLATGFFIS FSR+GTLLS+FTLNPFAKLSAADF+G TPSWTS FVG F+SYSFPSSP
Sbjct: 61  VAPLATGFFISFFSRIGTLLSVFTLNPFAKLSAADFAGPTPSWTSGFVGFFESYSFPSSP 120

Query: 121 AQARLRVHENAKRYARNYASLFVLFFVCTLYQMPLALVGLISCLALWDVVKFCGDRWGLD 180
           AQARLRVHENAKRYARNYASLFVLFFVCTLYQMPLAL+GL+SCLALWD+VKFCGDRWGLD
Sbjct: 121 AQARLRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLVSCLALWDIVKFCGDRWGLD 180

Query: 181 RYPVVWQCLVRIAQCVTVIILLYSNFQMALFCALGIGYAGMVFHAAFRKLTLAKPPST 238
           +YPVVWQCLVRIAQCVTVIILL+SNFQMA+FCALG+GY GM+ HAAFRKLTL +PPS+
Sbjct: 181 QYPVVWQCLVRIAQCVTVIILLFSNFQMAIFCALGVGYTGMILHAAFRKLTLTRPPSS 234

[Close]

BLAST of MC11g0861 vs. NCBI nr
Match: XP_023535020.1 (PRA1 family protein H-like [Cucurbita pepo subsp. pepo] >XP_023535022.1 PRA1 family protein H-like [Cucurbita pepo subsp. pepo] >XP_023535023.1 PRA1 family protein H-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 402 bits (1032), Expect = 7.36e-139
Identity = 200/238 (84.03%), Postives = 217/238 (91.18%), Query Frame = 0


Query: 1   MSFSSNPLSLSVPDGAFDSWLRDSGYLEILDQRTSDLHRNSSAAAPAGPTSSFPSSSASS 60
           MSFSSNPLSLSVPD AFDSWLRDSGYLEILDQRTSDLHR+SSA A   PT   P++    
Sbjct: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSATAATAPTRPTPTA---- 60

Query: 61  TAPLATGFFISLFSRVGTLLSLFTLNPFAKLSAADFSGQTPSWTSAFVGLFDSYSFPSSP 120
            APLATGFFIS FSR+GTLLS+FTLNPFAKLSAADF+G TPSWTS FVG F+SYSFPSSP
Sbjct: 61  VAPLATGFFISFFSRIGTLLSVFTLNPFAKLSAADFAGPTPSWTSGFVGFFESYSFPSSP 120

Query: 121 AQARLRVHENAKRYARNYASLFVLFFVCTLYQMPLALVGLISCLALWDVVKFCGDRWGLD 180
           AQARLRVHENAKRYARNYASLFVLFFVCTLYQMPLAL+GL+SCLALWD+VKFCGDRWGLD
Sbjct: 121 AQARLRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLVSCLALWDIVKFCGDRWGLD 180

Query: 181 RYPVVWQCLVRIAQCVTVIILLYSNFQMALFCALGIGYAGMVFHAAFRKLTLAKPPST 238
           +YPVVWQCLVRIAQCVTVIILL+SNFQMA+FCAL +GY GM+ HAAFRKLTL +PPS+
Sbjct: 181 KYPVVWQCLVRIAQCVTVIILLFSNFQMAIFCALAVGYTGMILHAAFRKLTLTRPPSS 234

[Close]

BLAST of MC11g0861 vs. NCBI nr
Match: XP_022976569.1 (PRA1 family protein H-like [Cucurbita maxima] >XP_022976570.1 PRA1 family protein H-like [Cucurbita maxima] >XP_022976572.1 PRA1 family protein H-like [Cucurbita maxima] >XP_022976573.1 PRA1 family protein H-like [Cucurbita maxima])

HSP 1 Score: 402 bits (1032), Expect = 7.36e-139
Identity = 200/238 (84.03%), Postives = 217/238 (91.18%), Query Frame = 0


Query: 1   MSFSSNPLSLSVPDGAFDSWLRDSGYLEILDQRTSDLHRNSSAAAPAGPTSSFPSSSASS 60
           MSFSSNPLSLSVPD AFDSWLRDSGYLEILDQRTSDLHR+SSA A   PT   P++    
Sbjct: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSATAATAPTRPTPTA---- 60

Query: 61  TAPLATGFFISLFSRVGTLLSLFTLNPFAKLSAADFSGQTPSWTSAFVGLFDSYSFPSSP 120
            APLATGFFIS FSR+GTLLS+FTLNPFAKLSAADF+G TPSWTS FVG F+SYSFPSSP
Sbjct: 61  VAPLATGFFISFFSRIGTLLSVFTLNPFAKLSAADFAGPTPSWTSGFVGFFESYSFPSSP 120

Query: 121 AQARLRVHENAKRYARNYASLFVLFFVCTLYQMPLALVGLISCLALWDVVKFCGDRWGLD 180
           AQARLRVHENAKRYARNYASLFVLFFVCTLYQMPLAL+GL+SCLALWD+VKFCGDRW LD
Sbjct: 121 AQARLRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLVSCLALWDIVKFCGDRWALD 180

Query: 181 RYPVVWQCLVRIAQCVTVIILLYSNFQMALFCALGIGYAGMVFHAAFRKLTLAKPPST 238
           +YPVVWQCLVRIAQCVTVIILL+SNFQMA+FCALG+GY GM+ HAAFRKLTL +PPS+
Sbjct: 181 KYPVVWQCLVRIAQCVTVIILLFSNFQMAIFCALGVGYTGMILHAAFRKLTLTRPPSS 234

[Close]

BLAST of MC11g0861 vs. ExPASy TrEMBL
Match: A0A6J1F5I6 (PRA1 family protein OS=Cucurbita moschata OX=3662 GN=LOC111442551 PE=3 SV=1)

HSP 1 Score: 402 bits (1034), Expect = 1.77e-139
Identity = 201/238 (84.45%), Postives = 217/238 (91.18%), Query Frame = 0


Query: 1   MSFSSNPLSLSVPDGAFDSWLRDSGYLEILDQRTSDLHRNSSAAAPAGPTSSFPSSSASS 60
           MSFSSNPLSLSVPD AFDSWLRDSGYLEILDQRTSDLHR+SSA A   PT   P +    
Sbjct: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSATAATAPTRPTPIA---- 60

Query: 61  TAPLATGFFISLFSRVGTLLSLFTLNPFAKLSAADFSGQTPSWTSAFVGLFDSYSFPSSP 120
            APLATGFFIS FSR+GTLLS+FTLNPFAKLSAADF+G TPSWTS FVG F+SYSFPSSP
Sbjct: 61  VAPLATGFFISFFSRIGTLLSVFTLNPFAKLSAADFAGPTPSWTSGFVGFFESYSFPSSP 120

Query: 121 AQARLRVHENAKRYARNYASLFVLFFVCTLYQMPLALVGLISCLALWDVVKFCGDRWGLD 180
           AQARLRVHENAKRYARNYASLFVLFFVCTLYQMPLAL+GL+SCLALWD+VKFCGDRWGLD
Sbjct: 121 AQARLRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLVSCLALWDIVKFCGDRWGLD 180

Query: 181 RYPVVWQCLVRIAQCVTVIILLYSNFQMALFCALGIGYAGMVFHAAFRKLTLAKPPST 238
           +YPVVWQCLVRIAQCVTVIILL+SNFQMA+FCALG+GY GM+ HAAFRKLTL +PPS+
Sbjct: 181 QYPVVWQCLVRIAQCVTVIILLFSNFQMAIFCALGVGYTGMILHAAFRKLTLTRPPSS 234

[Close]

BLAST of MC11g0861 vs. ExPASy TrEMBL
Match: A0A6J1IMK5 (PRA1 family protein OS=Cucurbita maxima OX=3661 GN=LOC111476927 PE=3 SV=1)

HSP 1 Score: 402 bits (1032), Expect = 3.56e-139
Identity = 200/238 (84.03%), Postives = 217/238 (91.18%), Query Frame = 0


Query: 1   MSFSSNPLSLSVPDGAFDSWLRDSGYLEILDQRTSDLHRNSSAAAPAGPTSSFPSSSASS 60
           MSFSSNPLSLSVPD AFDSWLRDSGYLEILDQRTSDLHR+SSA A   PT   P++    
Sbjct: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSATAATAPTRPTPTA---- 60

Query: 61  TAPLATGFFISLFSRVGTLLSLFTLNPFAKLSAADFSGQTPSWTSAFVGLFDSYSFPSSP 120
            APLATGFFIS FSR+GTLLS+FTLNPFAKLSAADF+G TPSWTS FVG F+SYSFPSSP
Sbjct: 61  VAPLATGFFISFFSRIGTLLSVFTLNPFAKLSAADFAGPTPSWTSGFVGFFESYSFPSSP 120

Query: 121 AQARLRVHENAKRYARNYASLFVLFFVCTLYQMPLALVGLISCLALWDVVKFCGDRWGLD 180
           AQARLRVHENAKRYARNYASLFVLFFVCTLYQMPLAL+GL+SCLALWD+VKFCGDRW LD
Sbjct: 121 AQARLRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLVSCLALWDIVKFCGDRWALD 180

Query: 181 RYPVVWQCLVRIAQCVTVIILLYSNFQMALFCALGIGYAGMVFHAAFRKLTLAKPPST 238
           +YPVVWQCLVRIAQCVTVIILL+SNFQMA+FCALG+GY GM+ HAAFRKLTL +PPS+
Sbjct: 181 KYPVVWQCLVRIAQCVTVIILLFSNFQMAIFCALGVGYTGMILHAAFRKLTLTRPPSS 234

[Close]

BLAST of MC11g0861 vs. ExPASy TrEMBL
Match: A0A0A0L4P4 (PRA1 family protein OS=Cucumis sativus OX=3659 GN=Csa_4G630550 PE=3 SV=1)

HSP 1 Score: 396 bits (1018), Expect = 4.33e-137
Identity = 201/238 (84.45%), Postives = 215/238 (90.34%), Query Frame = 0


Query: 1   MSFSSNPLSLSVPDGAFDSWLRDSGYLEILDQRTSDLHRNSSAAAPAGPTSSFPSSSASS 60
           MSFSSNPLSLSVPD AFDSWLRDSGYLEILDQRTSDLHR+SSAA PA PT +       +
Sbjct: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSAAPPARPTPT-------A 60

Query: 61  TAPLATGFFISLFSRVGTLLSLFTLNPFAKLSAADFSGQTPSWTSAFVGLFDSYSFPSSP 120
            APLATGFFISLFSR+ TLLS+FTLNPFAKLSAADFSG TPSWT+ FVG F+SYSFPSSP
Sbjct: 61  AAPLATGFFISLFSRIATLLSIFTLNPFAKLSAADFSGPTPSWTTGFVGFFESYSFPSSP 120

Query: 121 AQARLRVHENAKRYARNYASLFVLFFVCTLYQMPLALVGLISCLALWDVVKFCGDRWGLD 180
           AQARLRVHENAKRYARNYASLFVLFFVCTLYQMPLAL+GLISCLALWD+VKFC DRWGLD
Sbjct: 121 AQARLRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDIVKFCCDRWGLD 180

Query: 181 RYPVVWQCLVRIAQCVTVIILLYSNFQMALFCALGIGYAGMVFHAAFRKLTLAKPPST 238
           +YPV+WQCLVRIAQC TVIILL+SNFQMA+FCALGIGY GM+ HAAFRKLT  KP ST
Sbjct: 181 KYPVLWQCLVRIAQCATVIILLFSNFQMAIFCALGIGYTGMILHAAFRKLTPTKPTST 231

[Close]

BLAST of MC11g0861 vs. ExPASy TrEMBL
Match: A0A1S3CLE4 (PRA1 family protein OS=Cucumis melo OX=3656 GN=LOC103501773 PE=3 SV=1)

HSP 1 Score: 396 bits (1017), Expect = 6.14e-137
Identity = 200/238 (84.03%), Postives = 214/238 (89.92%), Query Frame = 0


Query: 1   MSFSSNPLSLSVPDGAFDSWLRDSGYLEILDQRTSDLHRNSSAAAPAGPTSSFPSSSASS 60
           MSFSSNPLSLSVPD AFDSWLRDSGYLEILDQRTSDLHR+SSAA P  PT +       +
Sbjct: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSAAPPTRPTPT-------A 60

Query: 61  TAPLATGFFISLFSRVGTLLSLFTLNPFAKLSAADFSGQTPSWTSAFVGLFDSYSFPSSP 120
            APLATGFFISLFSR+ TLLS+FTLNPF+KLSAADFSG TPSWTS FVG F+SYSFPSSP
Sbjct: 61  AAPLATGFFISLFSRIATLLSVFTLNPFSKLSAADFSGPTPSWTSGFVGFFESYSFPSSP 120

Query: 121 AQARLRVHENAKRYARNYASLFVLFFVCTLYQMPLALVGLISCLALWDVVKFCGDRWGLD 180
           AQARLRVHENAKRYARNYASLFVLFFVCTLYQMPLAL+GLISCLALWD+VKFC DRWGLD
Sbjct: 121 AQARLRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDIVKFCCDRWGLD 180

Query: 181 RYPVVWQCLVRIAQCVTVIILLYSNFQMALFCALGIGYAGMVFHAAFRKLTLAKPPST 238
           +YPV+WQCLVRIAQC T IILL+SNFQMA+FCALGIGY GM+ HAAFRKLT  KPPST
Sbjct: 181 KYPVLWQCLVRIAQCATAIILLFSNFQMAIFCALGIGYTGMILHAAFRKLTPTKPPST 231

[Close]

BLAST of MC11g0861 vs. ExPASy TrEMBL
Match: A0A6J1FMA4 (PRA1 family protein OS=Cucurbita moschata OX=3662 GN=LOC111446689 PE=3 SV=1)

HSP 1 Score: 395 bits (1016), Expect = 1.01e-136
Identity = 200/241 (82.99%), Postives = 220/241 (91.29%), Query Frame = 0


Query: 1   MSFSSNPLSLSVPDGAFDSWLRDSGYLEILDQRTSDLHRNSSAAAPAGPTSSFPSSSASS 60
           MSFS NPLSLSVPDGAFDSWLRDSGYLEI+DQRTSD+HR+SSAAA A    +   S+++ 
Sbjct: 1   MSFSPNPLSLSVPDGAFDSWLRDSGYLEIIDQRTSDVHRHSSAAAAAAAPIT---STSAP 60

Query: 61  TAPLATGFFISLFSRVGTLLSLFTLNPFAKLSAADFSGQTPSWTSAFVGLFDSYSFPSSP 120
           T PLATGFFISLFSR+ TLLS+FTLNPFAKLSAADFSG TPSWTS F+G F+SYSFPSSP
Sbjct: 61  TTPLATGFFISLFSRIVTLLSIFTLNPFAKLSAADFSGPTPSWTSGFIGSFESYSFPSSP 120

Query: 121 AQARLRVHENAKRYARNYASLFVLFFVCTLYQMPLALVGLISCLALWDVVKFCGDRWGLD 180
           AQARLR HENAKRYARNYASLFVLFFVCTLYQMP+AL+GLISC+ALWDVVKFC +RWGLD
Sbjct: 121 AQARLRAHENAKRYARNYASLFVLFFVCTLYQMPVALLGLISCMALWDVVKFCCNRWGLD 180

Query: 181 RYPVVWQCLVRIAQCVTVIILLYSNFQMALFCALGIGYAGMVFHAAFRKLTLAKPPSTNI 240
           +YPVVWQCLVR+AQCVTVIILL+SNFQMA+FCALGIGY GM+ HAAFRKLTLAKPPST  
Sbjct: 181 KYPVVWQCLVRVAQCVTVIILLFSNFQMAIFCALGIGYTGMILHAAFRKLTLAKPPSTGS 238

[Close]

BLAST of MC11g0861 vs. TAIR 10
Match: AT4G27540.1 (prenylated RAB acceptor 1.H )

HSP 1 Score: 266.2 bits (679), Expect = 3.3e-71
Identity = 140/244 (57.38%), Postives = 178/244 (72.95%), Query Frame = 0


Query: 1   MSFSSNPLSLSVPDGAFDSWLRDSGYLEILDQRTSDLHRNSSAAAPAGPTSSFPSSSASS 60
           M+FS NPLSLSVPD AF+SWLRDSGYLE+LD      HR S+AAA A  ++S  SS+A++
Sbjct: 1   MAFSPNPLSLSVPDPAFESWLRDSGYLELLD------HRTSAAAAAASSSASVSSSAAAT 60

Query: 61  TA-------PLATGFFISLFSRVGTLLSLFTLNPFAKLSAADFSGQTPSWTSAFVGLFDS 120
           +A        +  GFF SL SR+ T+ SL T+NPF+KLSA DFSG T  WT+ F+G  DS
Sbjct: 61  SAASDDVVSSITGGFFASLLSRLVTVSSLLTINPFSKLSADDFSGDTTPWTTGFIGNCDS 120

Query: 121 YSFPSSPAQARLRVHENAKRYARNYASLFVLFFVCTLYQMPLALVGLISCLALWDVVKFC 180
           YSFPSS  QAR+RVHEN KR+ARNYA+LF++FF C LYQMPLALVGL+  LALW++ K+C
Sbjct: 121 YSFPSSSQQARMRVHENIKRFARNYATLFIVFFACALYQMPLALVGLLGSLALWELFKYC 180

Query: 181 GDRWGLDRYPVVWQCLVRIAQCVTVIILLYSNFQMALFCALGIGYAGMVFHAAFRKLTLA 238
            D+W  DR+P + +  + I QC T ++L + N QMALF AL I Y+ M+ HA FRKLT +
Sbjct: 181 SDKWKFDRHPSMRKLSIGIGQCATAVLLTFLNVQMALFSALAISYSVMILHAGFRKLTPS 238

The following BLAST results are available for this feature:

BLAST of MC11g0861 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LFP1	4.7e-70	57.38	PRA1 family protein H OS=Arabidopsis thaliana OX=3702 GN=PRA1H PE=2 SV=1	[more]

BLAST of MC11g0861 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6591944.1	6.33e-140	84.87	PRA1 family protein H, partial [Cucurbita argyrosperma subsp. sororia] >KAG70248...	[more]
XP_038898448.1	1.28e-139	86.08	PRA1 family protein H [Benincasa hispida]	[more]
XP_022935725.1	3.65e-139	84.45	PRA1 family protein H-like [Cucurbita moschata] >XP_022935726.1 PRA1 family prot...	[more]
XP_023535020.1	7.36e-139	84.03	PRA1 family protein H-like [Cucurbita pepo subsp. pepo] >XP_023535022.1 PRA1 fam...	[more]
XP_022976569.1	7.36e-139	84.03	PRA1 family protein H-like [Cucurbita maxima] >XP_022976570.1 PRA1 family protei...	[more]

BLAST of MC11g0861 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F5I6	1.77e-139	84.45	PRA1 family protein OS=Cucurbita moschata OX=3662 GN=LOC111442551 PE=3 SV=1	[more]
A0A6J1IMK5	3.56e-139	84.03	PRA1 family protein OS=Cucurbita maxima OX=3661 GN=LOC111476927 PE=3 SV=1	[more]
A0A0A0L4P4	4.33e-137	84.45	PRA1 family protein OS=Cucumis sativus OX=3659 GN=Csa_4G630550 PE=3 SV=1	[more]
A0A1S3CLE4	6.14e-137	84.03	PRA1 family protein OS=Cucumis melo OX=3656 GN=LOC103501773 PE=3 SV=1	[more]
A0A6J1FMA4	1.01e-136	82.99	PRA1 family protein OS=Cucurbita moschata OX=3662 GN=LOC111446689 PE=3 SV=1	[more]

BLAST of MC11g0861 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G27540.1	3.3e-71	57.38	prenylated RAB acceptor 1.H	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004895	Prenylated rab acceptor PRA1	PFAM	PF03208	PRA1	coord: 108..229 e-value: 2.7E-14 score: 53.0
IPR004895	Prenylated rab acceptor PRA1	PANTHER	PTHR19317	PRENYLATED RAB ACCEPTOR 1-RELATED	coord: 1..236
None	No IPR available	PANTHER	PTHR19317:SF1	PRA1 FAMILY PROTEIN H	coord: 1..236

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC11g0861.1	MC11g0861.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016021	integral component of membrane