MC11g0831 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC11g0831
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like
Location	MC11: 7036457 .. 7036876 (-)
RNA-Seq Expression	MC11g0831
Synteny	MC11g0831

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GCGGTGCCGGTGATGACGGTGAGTCGATACGAATCACAGAAGCGACGAGATTGGTACACTTTCGGGCAGTACTTGAGAAATCAGAGACCTCCGCTGGCAATGTCACAGTGCAATTCCAGCCATGTGTTGGATTTCCTCCGCTACCTTGACCAGTTTGGGAAGACGAAAGTGCACTTAAATGGGTGTGGATTCTTCGGGCAGCCCGAGCCAGCAGGGCCCTGTACTTGCCCCCTCCGCCAGGCTTGGGGTAGCCTCGACGCCCTCATCGGCCGCCTTCGGGCAGCTTACGAAGAGAACAATGGAGGGTCTTCAGAGACAAACCCATTTGCGAGTGGTGCTATCAGAATCTATTTGCGAGAAGTGAGAGACTCCCAATCCAAGGCGAGAGGAATTCCTTATAAGAAGAGGAACAAAAAGAAG

mRNA sequence

GCGGTGCCGGTGATGACGGTGAGTCGATACGAATCACAGAAGCGACGAGATTGGTACACTTTCGGGCAGTACTTGAGAAATCAGAGACCTCCGCTGGCAATGTCACAGTGCAATTCCAGCCATGTGTTGGATTTCCTCCGCTACCTTGACCAGTTTGGGAAGACGAAAGTGCACTTAAATGGGTGTGGATTCTTCGGGCAGCCCGAGCCAGCAGGGCCCTGTACTTGCCCCCTCCGCCAGGCTTGGGGTAGCCTCGACGCCCTCATCGGCCGCCTTCGGGCAGCTTACGAAGAGAACAATGGAGGGTCTTCAGAGACAAACCCATTTGCGAGTGGTGCTATCAGAATCTATTTGCGAGAAGTGAGAGACTCCCAATCCAAGGCGAGAGGAATTCCTTATAAGAAGAGGAACAAAAAGAAG

Coding sequence (CDS)

GCGGTGCCGGTGATGACGGTGAGTCGATACGAATCACAGAAGCGACGAGATTGGTACACTTTCGGGCAGTACTTGAGAAATCAGAGACCTCCGCTGGCAATGTCACAGTGCAATTCCAGCCATGTGTTGGATTTCCTCCGCTACCTTGACCAGTTTGGGAAGACGAAAGTGCACTTAAATGGGTGTGGATTCTTCGGGCAGCCCGAGCCAGCAGGGCCCTGTACTTGCCCCCTCCGCCAGGCTTGGGGTAGCCTCGACGCCCTCATCGGCCGCCTTCGGGCAGCTTACGAAGAGAACAATGGAGGGTCTTCAGAGACAAACCCATTTGCGAGTGGTGCTATCAGAATCTATTTGCGAGAAGTGAGAGACTCCCAATCCAAGGCGAGAGGAATTCCTTATAAGAAGAGGAACAAAAAGAAG

Protein sequence

AVPVMTVSRYESQKRRDWYTFGQYLRNQRPPLAMSQCNSSHVLDFLRYLDQFGKTKVHLNGCGFFGQPEPAGPCTCPLRQAWGSLDALIGRLRAAYEENNGGSSETNPFASGAIRIYLREVRDSQSKARGIPYKKRNKKK

Homology

[Close]

BLAST of MC11g0831 vs. ExPASy Swiss-Prot
Match: Q9S7R3 (Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 OS=Arabidopsis thaliana OX=3702 GN=LSH10 PE=1 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 3.7e-62
Identity = 112/138 (81.16%), Postives = 123/138 (89.13%), Query Frame = 0


Query: 3   PVMTVSRYESQKRRDWYTFGQYLRNQRPPLAMSQCNSSHVLDFLRYLDQFGKTKVHLNGC 62
           P +T SRYESQKRRDW TFGQYL+NQRPP+ MS C+ +HVLDFLRYLDQFGKTKVH+ GC
Sbjct: 19  PPVTPSRYESQKRRDWNTFGQYLKNQRPPVPMSHCSCNHVLDFLRYLDQFGKTKVHVPGC 78

Query: 63  GFFGQPEPAGPCTCPLRQAWGSLDALIGRLRAAYEENNGGSSETNPFASGAIRIYLREVR 122
            F+GQPEP  PCTCPLRQAWGSLDALIGRLRAAYEE NGG  ETNPFASGAIR+YLREVR
Sbjct: 79  MFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAAYEE-NGGPPETNPFASGAIRVYLREVR 138

Query: 123 DSQSKARGIPYKKRNKKK 141
           + Q+KARGIPYKK+ KKK
Sbjct: 139 ECQAKARGIPYKKKKKKK 155

[Close]

BLAST of MC11g0831 vs. ExPASy Swiss-Prot
Match: Q9ZVA0 (Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 7 OS=Arabidopsis thaliana OX=3702 GN=LSH7 PE=1 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 2.7e-57
Identity = 103/134 (76.87%), Postives = 119/134 (88.81%), Query Frame = 0


Query: 7   VSRYESQKRRDWYTFGQYLRNQRPPLAMSQCNSSHVLDFLRYLDQFGKTKVHLNGCGFFG 66
           +SRYESQKRRDW TF QYLRNQ+PP+ +SQC S+H+LDFL+YLDQFGKTKVH++GC FFG
Sbjct: 38  LSRYESQKRRDWNTFCQYLRNQQPPVHISQCGSNHILDFLQYLDQFGKTKVHIHGCVFFG 97

Query: 67  QPEPAGPCTCPLRQAWGSLDALIGRLRAAYEENNGGSSETNPFASGAIRIYLREVRDSQS 126
           Q EPAG C CPL+QAWGSLDALIGRLRAA+EE NGG  E NPFA G IR++LREVRDSQ+
Sbjct: 98  QVEPAGQCNCPLKQAWGSLDALIGRLRAAFEE-NGGLPERNPFAGGGIRVFLREVRDSQA 157

Query: 127 KARGIPYKKRNKKK 141
           KARG+PYKKR K+K
Sbjct: 158 KARGVPYKKRKKRK 170

[Close]

BLAST of MC11g0831 vs. ExPASy Swiss-Prot
Match: A2XED8 (Protein G1-like7 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_10694 PE=3 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 3.6e-57
Identity = 101/138 (73.19%), Postives = 121/138 (87.68%), Query Frame = 0


Query: 3   PVMTVSRYESQKRRDWYTFGQYLRNQRPPLAMSQCNSSHVLDFLRYLDQFGKTKVHLNGC 62
           P   +SRYESQKRRDW TF QYLRN RPPL +++C+ +HV++FLRYLDQFGKTKVH +GC
Sbjct: 25  PPAQLSRYESQKRRDWNTFLQYLRNHRPPLTLARCSGAHVIEFLRYLDQFGKTKVHASGC 84

Query: 63  GFFGQPEPAGPCTCPLRQAWGSLDALIGRLRAAYEENNGGSSETNPFASGAIRIYLREVR 122
            F+GQP P GPC CPLRQAWGSLDALIGRLRAAYEE +GG+ E+NPFA+ A+RIYLREVR
Sbjct: 85  AFYGQPSPPGPCPCPLRQAWGSLDALIGRLRAAYEE-SGGTPESNPFAARAVRIYLREVR 144

Query: 123 DSQSKARGIPYKKRNKKK 141
           DSQ+KARGIPY+K+ +K+
Sbjct: 145 DSQAKARGIPYEKKKRKR 161

[Close]

BLAST of MC11g0831 vs. ExPASy Swiss-Prot
Match: Q941W1 (Protein G1-like7 OS=Oryza sativa subsp. japonica OX=39947 GN=G1L7 PE=1 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 3.6e-57
Identity = 101/138 (73.19%), Postives = 121/138 (87.68%), Query Frame = 0


Query: 3   PVMTVSRYESQKRRDWYTFGQYLRNQRPPLAMSQCNSSHVLDFLRYLDQFGKTKVHLNGC 62
           P   +SRYESQKRRDW TF QYLRN RPPL +++C+ +HV++FLRYLDQFGKTKVH +GC
Sbjct: 25  PPAQLSRYESQKRRDWNTFLQYLRNHRPPLTLARCSGAHVIEFLRYLDQFGKTKVHASGC 84

Query: 63  GFFGQPEPAGPCTCPLRQAWGSLDALIGRLRAAYEENNGGSSETNPFASGAIRIYLREVR 122
            F+GQP P GPC CPLRQAWGSLDALIGRLRAAYEE +GG+ E+NPFA+ A+RIYLREVR
Sbjct: 85  AFYGQPSPPGPCPCPLRQAWGSLDALIGRLRAAYEE-SGGTPESNPFAARAVRIYLREVR 144

Query: 123 DSQSKARGIPYKKRNKKK 141
           DSQ+KARGIPY+K+ +K+
Sbjct: 145 DSQAKARGIPYEKKKRKR 161

[Close]

BLAST of MC11g0831 vs. ExPASy Swiss-Prot
Match: Q9SN52 (Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 9 OS=Arabidopsis thaliana OX=3702 GN=LSH9 PE=1 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 4.7e-57
Identity = 101/138 (73.19%), Postives = 120/138 (86.96%), Query Frame = 0


Query: 3   PVMTVSRYESQKRRDWYTFGQYLRNQRPPLAMSQCNSSHVLDFLRYLDQFGKTKVHLNGC 62
           P   +SRYESQKRRDW TF QYL++Q PPL MSQ + +HVL FLRYLDQFGKTKVH   C
Sbjct: 31  PQQPLSRYESQKRRDWNTFVQYLKSQNPPLMMSQFDYTHVLSFLRYLDQFGKTKVHHQAC 90

Query: 63  GFFGQPEPAGPCTCPLRQAWGSLDALIGRLRAAYEENNGGSSETNPFASGAIRIYLREVR 122
            FFGQP+P GPCTCPL+QAWGSLDALIGRLRAAYEE+ GGS +TNPFA+G+IR++LREVR
Sbjct: 91  VFFGQPDPPGPCTCPLKQAWGSLDALIGRLRAAYEEHGGGSPDTNPFANGSIRVHLREVR 150

Query: 123 DSQSKARGIPYKKRNKKK 141
           +SQ+KARGIPY+K+ ++K
Sbjct: 151 ESQAKARGIPYRKKKRRK 168

[Close]

BLAST of MC11g0831 vs. NCBI nr
Match: XP_022138414.1 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Momordica charantia])

HSP 1 Score: 291 bits (746), Expect = 4.43e-99
Identity = 139/140 (99.29%), Postives = 139/140 (99.29%), Query Frame = 0


Query: 1   AVPVMTVSRYESQKRRDWYTFGQYLRNQRPPLAMSQCNSSHVLDFLRYLDQFGKTKVHLN 60
           AVPVMTVSRYESQKRRDWYTFGQYLRNQRPPLAMSQCNSSHVLDFLRYLDQFGKTKVHLN
Sbjct: 26  AVPVMTVSRYESQKRRDWYTFGQYLRNQRPPLAMSQCNSSHVLDFLRYLDQFGKTKVHLN 85

Query: 61  GCGFFGQPEPAGPCTCPLRQAWGSLDALIGRLRAAYEENNGGSSETNPFASGAIRIYLRE 120
           GCGFFGQPEPAGPCTCPLRQAWGSLDALIGRLRAAYEENNGGS ETNPFASGAIRIYLRE
Sbjct: 86  GCGFFGQPEPAGPCTCPLRQAWGSLDALIGRLRAAYEENNGGSLETNPFASGAIRIYLRE 145

Query: 121 VRDSQSKARGIPYKKRNKKK 140
           VRDSQSKARGIPYKKRNKKK
Sbjct: 146 VRDSQSKARGIPYKKRNKKK 165

[Close]

BLAST of MC11g0831 vs. NCBI nr
Match: XP_008463732.1 (PREDICTED: protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Cucumis melo])

HSP 1 Score: 270 bits (689), Expect = 5.08e-90
Identity = 127/140 (90.71%), Postives = 134/140 (95.71%), Query Frame = 0


Query: 1   AVPVMTVSRYESQKRRDWYTFGQYLRNQRPPLAMSQCNSSHVLDFLRYLDQFGKTKVHLN 60
           A P   +SRYESQKRRDWYTFGQYLRNQRPPLA+SQCNSSHVL+FLRYLDQFGKTKVHLN
Sbjct: 51  AAPTPVISRYESQKRRDWYTFGQYLRNQRPPLAISQCNSSHVLEFLRYLDQFGKTKVHLN 110

Query: 61  GCGFFGQPEPAGPCTCPLRQAWGSLDALIGRLRAAYEENNGGSSETNPFASGAIRIYLRE 120
           GCGFFG+PEPAGPCTCPLRQAWGSLDALIGRLRAAYEEN GGSS+TNPFASGAIR+YLRE
Sbjct: 111 GCGFFGEPEPAGPCTCPLRQAWGSLDALIGRLRAAYEEN-GGSSDTNPFASGAIRVYLRE 170

Query: 121 VRDSQSKARGIPYKKRNKKK 140
           VRDSQSKARGIPYKK+ KKK
Sbjct: 171 VRDSQSKARGIPYKKKKKKK 189

[Close]

BLAST of MC11g0831 vs. NCBI nr
Match: KAA0066771.1 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Cucumis melo var. makuwa] >TYK27918.1 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Cucumis melo var. makuwa])

HSP 1 Score: 270 bits (689), Expect = 9.03e-90
Identity = 127/140 (90.71%), Postives = 134/140 (95.71%), Query Frame = 0


Query: 1   AVPVMTVSRYESQKRRDWYTFGQYLRNQRPPLAMSQCNSSHVLDFLRYLDQFGKTKVHLN 60
           A P   +SRYESQKRRDWYTFGQYLRNQRPPLA+SQCNSSHVL+FLRYLDQFGKTKVHLN
Sbjct: 51  AAPTPVISRYESQKRRDWYTFGQYLRNQRPPLAISQCNSSHVLEFLRYLDQFGKTKVHLN 110

Query: 61  GCGFFGQPEPAGPCTCPLRQAWGSLDALIGRLRAAYEENNGGSSETNPFASGAIRIYLRE 120
           GCGFFG+PEPAGPCTCPLRQAWGSLDALIGRLRAAYEEN GGSS+TNPFASGAIR+YLRE
Sbjct: 111 GCGFFGEPEPAGPCTCPLRQAWGSLDALIGRLRAAYEEN-GGSSDTNPFASGAIRVYLRE 170

Query: 121 VRDSQSKARGIPYKKRNKKK 140
           VRDSQSKARGIPYKK+ KKK
Sbjct: 171 VRDSQSKARGIPYKKKKKKK 189

[Close]

BLAST of MC11g0831 vs. NCBI nr
Match: KAG7024787.1 (Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 268 bits (684), Expect = 1.70e-89
Identity = 127/137 (92.70%), Postives = 133/137 (97.08%), Query Frame = 0


Query: 4   VMTVSRYESQKRRDWYTFGQYLRNQRPPLAMSQCNSSHVLDFLRYLDQFGKTKVHLNGCG 63
           V+ VSRYESQKRRDWYTFGQYLRNQRPPLA+SQCNSSHVLDFLRYLDQFGKTKVHLNGCG
Sbjct: 35  VVPVSRYESQKRRDWYTFGQYLRNQRPPLAISQCNSSHVLDFLRYLDQFGKTKVHLNGCG 94

Query: 64  FFGQPEPAGPCTCPLRQAWGSLDALIGRLRAAYEENNGGSSETNPFASGAIRIYLREVRD 123
           FFGQPEP GPCTCPLRQAWGSLDALIGRLRAAYEEN GGSS+TNPFASGAIR+YLREV+D
Sbjct: 95  FFGQPEPPGPCTCPLRQAWGSLDALIGRLRAAYEEN-GGSSDTNPFASGAIRVYLREVKD 154

Query: 124 SQSKARGIPYKKRNKKK 140
           SQSKARGIPYKK+ KKK
Sbjct: 155 SQSKARGIPYKKKKKKK 170

[Close]

BLAST of MC11g0831 vs. NCBI nr
Match: XP_022981128.1 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Cucurbita maxima])

HSP 1 Score: 267 bits (683), Expect = 2.26e-89
Identity = 127/133 (95.49%), Postives = 130/133 (97.74%), Query Frame = 0


Query: 7   VSRYESQKRRDWYTFGQYLRNQRPPLAMSQCNSSHVLDFLRYLDQFGKTKVHLNGCGFFG 66
           VSRYESQKRRDWYTFGQYLRNQRPPLA+SQCNSSHVLDFLRYLDQFGKTKVHLNGCGFFG
Sbjct: 39  VSRYESQKRRDWYTFGQYLRNQRPPLAISQCNSSHVLDFLRYLDQFGKTKVHLNGCGFFG 98

Query: 67  QPEPAGPCTCPLRQAWGSLDALIGRLRAAYEENNGGSSETNPFASGAIRIYLREVRDSQS 126
           QPEP GPCTCPLRQAWGSLDALIGRLRAAYEEN GGSSETNPFASGAIRIYLRE+RDSQS
Sbjct: 99  QPEPPGPCTCPLRQAWGSLDALIGRLRAAYEEN-GGSSETNPFASGAIRIYLREIRDSQS 158

Query: 127 KARGIPYKKRNKK 139
           KARGIPYKK+ KK
Sbjct: 159 KARGIPYKKKKKK 170

[Close]

BLAST of MC11g0831 vs. ExPASy TrEMBL
Match: A0A6J1CA29 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like OS=Momordica charantia OX=3673 GN=LOC111009589 PE=3 SV=1)

HSP 1 Score: 291 bits (746), Expect = 2.14e-99
Identity = 139/140 (99.29%), Postives = 139/140 (99.29%), Query Frame = 0


Query: 1   AVPVMTVSRYESQKRRDWYTFGQYLRNQRPPLAMSQCNSSHVLDFLRYLDQFGKTKVHLN 60
           AVPVMTVSRYESQKRRDWYTFGQYLRNQRPPLAMSQCNSSHVLDFLRYLDQFGKTKVHLN
Sbjct: 26  AVPVMTVSRYESQKRRDWYTFGQYLRNQRPPLAMSQCNSSHVLDFLRYLDQFGKTKVHLN 85

Query: 61  GCGFFGQPEPAGPCTCPLRQAWGSLDALIGRLRAAYEENNGGSSETNPFASGAIRIYLRE 120
           GCGFFGQPEPAGPCTCPLRQAWGSLDALIGRLRAAYEENNGGS ETNPFASGAIRIYLRE
Sbjct: 86  GCGFFGQPEPAGPCTCPLRQAWGSLDALIGRLRAAYEENNGGSLETNPFASGAIRIYLRE 145

Query: 121 VRDSQSKARGIPYKKRNKKK 140
           VRDSQSKARGIPYKKRNKKK
Sbjct: 146 VRDSQSKARGIPYKKRNKKK 165

[Close]

BLAST of MC11g0831 vs. ExPASy TrEMBL
Match: A0A1S3CJY2 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like OS=Cucumis melo OX=3656 GN=LOC103501807 PE=3 SV=1)

HSP 1 Score: 270 bits (689), Expect = 2.46e-90
Identity = 127/140 (90.71%), Postives = 134/140 (95.71%), Query Frame = 0


Query: 1   AVPVMTVSRYESQKRRDWYTFGQYLRNQRPPLAMSQCNSSHVLDFLRYLDQFGKTKVHLN 60
           A P   +SRYESQKRRDWYTFGQYLRNQRPPLA+SQCNSSHVL+FLRYLDQFGKTKVHLN
Sbjct: 51  AAPTPVISRYESQKRRDWYTFGQYLRNQRPPLAISQCNSSHVLEFLRYLDQFGKTKVHLN 110

Query: 61  GCGFFGQPEPAGPCTCPLRQAWGSLDALIGRLRAAYEENNGGSSETNPFASGAIRIYLRE 120
           GCGFFG+PEPAGPCTCPLRQAWGSLDALIGRLRAAYEEN GGSS+TNPFASGAIR+YLRE
Sbjct: 111 GCGFFGEPEPAGPCTCPLRQAWGSLDALIGRLRAAYEEN-GGSSDTNPFASGAIRVYLRE 170

Query: 121 VRDSQSKARGIPYKKRNKKK 140
           VRDSQSKARGIPYKK+ KKK
Sbjct: 171 VRDSQSKARGIPYKKKKKKK 189

[Close]

BLAST of MC11g0831 vs. ExPASy TrEMBL
Match: A0A5D3DWV8 (Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G001030 PE=3 SV=1)

HSP 1 Score: 270 bits (689), Expect = 4.37e-90
Identity = 127/140 (90.71%), Postives = 134/140 (95.71%), Query Frame = 0


Query: 1   AVPVMTVSRYESQKRRDWYTFGQYLRNQRPPLAMSQCNSSHVLDFLRYLDQFGKTKVHLN 60
           A P   +SRYESQKRRDWYTFGQYLRNQRPPLA+SQCNSSHVL+FLRYLDQFGKTKVHLN
Sbjct: 51  AAPTPVISRYESQKRRDWYTFGQYLRNQRPPLAISQCNSSHVLEFLRYLDQFGKTKVHLN 110

Query: 61  GCGFFGQPEPAGPCTCPLRQAWGSLDALIGRLRAAYEENNGGSSETNPFASGAIRIYLRE 120
           GCGFFG+PEPAGPCTCPLRQAWGSLDALIGRLRAAYEEN GGSS+TNPFASGAIR+YLRE
Sbjct: 111 GCGFFGEPEPAGPCTCPLRQAWGSLDALIGRLRAAYEEN-GGSSDTNPFASGAIRVYLRE 170

Query: 121 VRDSQSKARGIPYKKRNKKK 140
           VRDSQSKARGIPYKK+ KKK
Sbjct: 171 VRDSQSKARGIPYKKKKKKK 189

[Close]

BLAST of MC11g0831 vs. ExPASy TrEMBL
Match: A0A6J1J187 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like OS=Cucurbita maxima OX=3661 GN=LOC111480369 PE=3 SV=1)

HSP 1 Score: 267 bits (683), Expect = 1.09e-89
Identity = 127/133 (95.49%), Postives = 130/133 (97.74%), Query Frame = 0


Query: 7   VSRYESQKRRDWYTFGQYLRNQRPPLAMSQCNSSHVLDFLRYLDQFGKTKVHLNGCGFFG 66
           VSRYESQKRRDWYTFGQYLRNQRPPLA+SQCNSSHVLDFLRYLDQFGKTKVHLNGCGFFG
Sbjct: 39  VSRYESQKRRDWYTFGQYLRNQRPPLAISQCNSSHVLDFLRYLDQFGKTKVHLNGCGFFG 98

Query: 67  QPEPAGPCTCPLRQAWGSLDALIGRLRAAYEENNGGSSETNPFASGAIRIYLREVRDSQS 126
           QPEP GPCTCPLRQAWGSLDALIGRLRAAYEEN GGSSETNPFASGAIRIYLRE+RDSQS
Sbjct: 99  QPEPPGPCTCPLRQAWGSLDALIGRLRAAYEEN-GGSSETNPFASGAIRIYLREIRDSQS 158

Query: 127 KARGIPYKKRNKK 139
           KARGIPYKK+ KK
Sbjct: 159 KARGIPYKKKKKK 170

[Close]

BLAST of MC11g0831 vs. ExPASy TrEMBL
Match: A0A6J1FP48 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like OS=Cucurbita moschata OX=3662 GN=LOC111446008 PE=3 SV=1)

HSP 1 Score: 266 bits (680), Expect = 2.93e-89
Identity = 126/133 (94.74%), Postives = 130/133 (97.74%), Query Frame = 0


Query: 7   VSRYESQKRRDWYTFGQYLRNQRPPLAMSQCNSSHVLDFLRYLDQFGKTKVHLNGCGFFG 66
           VSRYESQKRRDWYTFGQYLRNQRPPLA+SQCNSSHVLDFLRYLDQFGKTKVHLNGCGFFG
Sbjct: 39  VSRYESQKRRDWYTFGQYLRNQRPPLAISQCNSSHVLDFLRYLDQFGKTKVHLNGCGFFG 98

Query: 67  QPEPAGPCTCPLRQAWGSLDALIGRLRAAYEENNGGSSETNPFASGAIRIYLREVRDSQS 126
           QPEP GPCTCPL+QAWGSLDALIGRLRAAYEEN GGSSETNPFASGAIRIYLRE+RDSQS
Sbjct: 99  QPEPPGPCTCPLKQAWGSLDALIGRLRAAYEEN-GGSSETNPFASGAIRIYLREIRDSQS 158

Query: 127 KARGIPYKKRNKK 139
           KARGIPYKK+ KK
Sbjct: 159 KARGIPYKKKKKK 170

[Close]

BLAST of MC11g0831 vs. TAIR 10
Match: AT2G42610.1 (Protein of unknown function (DUF640) )

HSP 1 Score: 238.8 bits (608), Expect = 2.6e-63
Identity = 112/138 (81.16%), Postives = 123/138 (89.13%), Query Frame = 0


Query: 3   PVMTVSRYESQKRRDWYTFGQYLRNQRPPLAMSQCNSSHVLDFLRYLDQFGKTKVHLNGC 62
           P +T SRYESQKRRDW TFGQYL+NQRPP+ MS C+ +HVLDFLRYLDQFGKTKVH+ GC
Sbjct: 19  PPVTPSRYESQKRRDWNTFGQYLKNQRPPVPMSHCSCNHVLDFLRYLDQFGKTKVHVPGC 78

Query: 63  GFFGQPEPAGPCTCPLRQAWGSLDALIGRLRAAYEENNGGSSETNPFASGAIRIYLREVR 122
            F+GQPEP  PCTCPLRQAWGSLDALIGRLRAAYEE NGG  ETNPFASGAIR+YLREVR
Sbjct: 79  MFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAAYEE-NGGPPETNPFASGAIRVYLREVR 138

Query: 123 DSQSKARGIPYKKRNKKK 141
           + Q+KARGIPYKK+ KKK
Sbjct: 139 ECQAKARGIPYKKKKKKK 155

[Close]

BLAST of MC11g0831 vs. TAIR 10
Match: AT2G42610.2 (Protein of unknown function (DUF640) )

HSP 1 Score: 238.8 bits (608), Expect = 2.6e-63
Identity = 112/138 (81.16%), Postives = 123/138 (89.13%), Query Frame = 0


Query: 3   PVMTVSRYESQKRRDWYTFGQYLRNQRPPLAMSQCNSSHVLDFLRYLDQFGKTKVHLNGC 62
           P +T SRYESQKRRDW TFGQYL+NQRPP+ MS C+ +HVLDFLRYLDQFGKTKVH+ GC
Sbjct: 19  PPVTPSRYESQKRRDWNTFGQYLKNQRPPVPMSHCSCNHVLDFLRYLDQFGKTKVHVPGC 78

Query: 63  GFFGQPEPAGPCTCPLRQAWGSLDALIGRLRAAYEENNGGSSETNPFASGAIRIYLREVR 122
            F+GQPEP  PCTCPLRQAWGSLDALIGRLRAAYEE NGG  ETNPFASGAIR+YLREVR
Sbjct: 79  MFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAAYEE-NGGPPETNPFASGAIRVYLREVR 138

Query: 123 DSQSKARGIPYKKRNKKK 141
           + Q+KARGIPYKK+ KKK
Sbjct: 139 ECQAKARGIPYKKKKKKK 155

[Close]

BLAST of MC11g0831 vs. TAIR 10
Match: AT1G78815.1 (Protein of unknown function (DUF640) )

HSP 1 Score: 222.6 bits (566), Expect = 1.9e-58
Identity = 103/134 (76.87%), Postives = 119/134 (88.81%), Query Frame = 0


Query: 7   VSRYESQKRRDWYTFGQYLRNQRPPLAMSQCNSSHVLDFLRYLDQFGKTKVHLNGCGFFG 66
           +SRYESQKRRDW TF QYLRNQ+PP+ +SQC S+H+LDFL+YLDQFGKTKVH++GC FFG
Sbjct: 38  LSRYESQKRRDWNTFCQYLRNQQPPVHISQCGSNHILDFLQYLDQFGKTKVHIHGCVFFG 97

Query: 67  QPEPAGPCTCPLRQAWGSLDALIGRLRAAYEENNGGSSETNPFASGAIRIYLREVRDSQS 126
           Q EPAG C CPL+QAWGSLDALIGRLRAA+EE NGG  E NPFA G IR++LREVRDSQ+
Sbjct: 98  QVEPAGQCNCPLKQAWGSLDALIGRLRAAFEE-NGGLPERNPFAGGGIRVFLREVRDSQA 157

Query: 127 KARGIPYKKRNKKK 141
           KARG+PYKKR K+K
Sbjct: 158 KARGVPYKKRKKRK 170

[Close]

BLAST of MC11g0831 vs. TAIR 10
Match: AT4G18610.1 (Protein of unknown function (DUF640) )

HSP 1 Score: 221.9 bits (564), Expect = 3.3e-58
Identity = 101/138 (73.19%), Postives = 120/138 (86.96%), Query Frame = 0


Query: 3   PVMTVSRYESQKRRDWYTFGQYLRNQRPPLAMSQCNSSHVLDFLRYLDQFGKTKVHLNGC 62
           P   +SRYESQKRRDW TF QYL++Q PPL MSQ + +HVL FLRYLDQFGKTKVH   C
Sbjct: 31  PQQPLSRYESQKRRDWNTFVQYLKSQNPPLMMSQFDYTHVLSFLRYLDQFGKTKVHHQAC 90

Query: 63  GFFGQPEPAGPCTCPLRQAWGSLDALIGRLRAAYEENNGGSSETNPFASGAIRIYLREVR 122
            FFGQP+P GPCTCPL+QAWGSLDALIGRLRAAYEE+ GGS +TNPFA+G+IR++LREVR
Sbjct: 91  VFFGQPDPPGPCTCPLKQAWGSLDALIGRLRAAYEEHGGGSPDTNPFANGSIRVHLREVR 150

Query: 123 DSQSKARGIPYKKRNKKK 141
           +SQ+KARGIPY+K+ ++K
Sbjct: 151 ESQAKARGIPYRKKKRRK 168

[Close]

BLAST of MC11g0831 vs. TAIR 10
Match: AT3G23290.2 (Protein of unknown function (DUF640) )

HSP 1 Score: 216.1 bits (549), Expect = 1.8e-56
Identity = 99/134 (73.88%), Postives = 117/134 (87.31%), Query Frame = 0


Query: 7   VSRYESQKRRDWYTFGQYLRNQRPPLAMSQCNSSHVLDFLRYLDQFGKTKVHLNGCGFFG 66
           +SRYE+QKRRDW TFGQYLRN RPPL++S+C+ +HVL+FLRYLDQFGKTKVH + C FFG
Sbjct: 46  LSRYENQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTHLCPFFG 105

Query: 67  QPEPAGPCTCPLRQAWGSLDALIGRLRAAYEENNGGSSETNPFASGAIRIYLREVRDSQS 126
            P P  PC CPLRQAWGSLDALIGRLRAA+EE NGGS ETNPF + A+R+YLREVRDSQ+
Sbjct: 106 HPNPPAPCACPLRQAWGSLDALIGRLRAAFEE-NGGSPETNPFGARAVRLYLREVRDSQA 165

Query: 127 KARGIPYKKRNKKK 141
           KARGI Y+K+ +K+
Sbjct: 166 KARGISYEKKKRKR 178

The following BLAST results are available for this feature:

BLAST of MC11g0831 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9S7R3	3.7e-62	81.16	Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 OS=Arabidopsis thaliana OX=3702 GN=L...	[more]
Q9ZVA0	2.7e-57	76.87	Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 7 OS=Arabidopsis thaliana OX=3702 GN=LS...	[more]
A2XED8	3.6e-57	73.19	Protein G1-like7 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_10694 PE=3 SV=1	[more]
Q941W1	3.6e-57	73.19	Protein G1-like7 OS=Oryza sativa subsp. japonica OX=39947 GN=G1L7 PE=1 SV=1	[more]
Q9SN52	4.7e-57	73.19	Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 9 OS=Arabidopsis thaliana OX=3702 GN=LS...	[more]

BLAST of MC11g0831 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022138414.1	4.43e-99	99.29	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Momordica charantia]	[more]
XP_008463732.1	5.08e-90	90.71	PREDICTED: protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Cucumis melo]	[more]
KAA0066771.1	9.03e-90	90.71	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Cucumis melo var. makuwa] >TYK...	[more]
KAG7024787.1	1.70e-89	92.70	Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10, partial [Cucurbita argyrosperma sub...	[more]
XP_022981128.1	2.26e-89	95.49	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Cucurbita maxima]	[more]

BLAST of MC11g0831 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CA29	2.14e-99	99.29	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like OS=Momordica charantia OX=3673 ...	[more]
A0A1S3CJY2	2.46e-90	90.71	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A5D3DWV8	4.37e-90	90.71	Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like OS=Cucumis melo var. makuwa OX=...	[more]
A0A6J1J187	1.09e-89	95.49	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A6J1FP48	2.93e-89	94.74	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like OS=Cucurbita moschata OX=3662 G...	[more]

BLAST of MC11g0831 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G42610.1	2.6e-63	81.16	Protein of unknown function (DUF640)	[more]
AT2G42610.2	2.6e-63	81.16	Protein of unknown function (DUF640)	[more]
AT1G78815.1	1.9e-58	76.87	Protein of unknown function (DUF640)	[more]
AT4G18610.1	3.3e-58	73.19	Protein of unknown function (DUF640)	[more]
AT3G23290.2	1.8e-56	73.88	Protein of unknown function (DUF640)	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006936	ALOG domain	PFAM	PF04852	DUF640	coord: 5..123 e-value: 6.2E-62 score: 207.4
IPR006936	ALOG domain	PROSITE	PS51697	ALOG	coord: 9..137 score: 67.043007
IPR040222	ALOG family	PANTHER	PTHR31165	PROTEIN G1-LIKE2	coord: 6..140
None	No IPR available	PANTHER	PTHR31165:SF9	PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 6	coord: 6..140

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC11g0831.1	MC11g0831.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009299	mRNA transcription
biological_process	GO:0009416	response to light stimulus
cellular_component	GO:0005634	nucleus