MC11g0816 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC11g0816
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC11: 6924870 .. 6925115 (+)
RNA-Seq ExpressionMC11g0816
SyntenyMC11g0816
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGGCATTTCTGGTGGCAGCCTTGGTTCTGAGCCAAGCAGACATGGGCTTGGGGCTCAGGAGGTTTCCCAAGAGGAAGATGGAGAAGGCTCGAAATATGGCGTTGGACGTCGACATCCTGCTCGGCGCCCTCCCGAGAGGCTTGACACCACCGTCTGCCCCGAGCGACCGAGAAAATCCCGCTCCCTTCAGCGGCAGCGATCGGGTGTTGGTGTCAGCTGCCCCGAGCCCCGAAATGGGCCAT

mRNA sequence

ATGGTGGCATTTCTGGTGGCAGCCTTGGTTCTGAGCCAAGCAGACATGGGCTTGGGGCTCAGGAGGTTTCCCAAGAGGAAGATGGAGAAGGCTCGAAATATGGCGTTGGACGTCGACATCCTGCTCGGCGCCCTCCCGAGAGGCTTGACACCACCGTCTGCCCCGAGCGACCGAGAAAATCCCGCTCCCTTCAGCGGCAGCGATCGGGTGTTGGTGTCAGCTGCCCCGAGCCCCGAAATGGGCCAT

Coding sequence (CDS)

ATGGTGGCATTTCTGGTGGCAGCCTTGGTTCTGAGCCAAGCAGACATGGGCTTGGGGCTCAGGAGGTTTCCCAAGAGGAAGATGGAGAAGGCTCGAAATATGGCGTTGGACGTCGACATCCTGCTCGGCGCCCTCCCGAGAGGCTTGACACCACCGTCTGCCCCGAGCGACCGAGAAAATCCCGCTCCCTTCAGCGGCAGCGATCGGGTGTTGGTGTCAGCTGCCCCGAGCCCCGAAATGGGCCAT

Protein sequence

MVAFLVAALVLSQADMGLGLRRFPKRKMEKARNMALDVDILLGALPRGLTPPSAPSDRENPAPFSGSDRVLVSAAPSPEMGH
Homology
BLAST of MC11g0816 vs. NCBI nr
Match: KGN55050.1 (hypothetical protein Csa_012928 [Cucumis sativus])

HSP 1 Score: 89.0 bits (219), Expect = 5.87e-21
Identity = 53/83 (63.86%), Postives = 64/83 (77.11%), Query Frame = 0

Query: 1  MVAFLVAALVLSQADMGLGLRRFPKRKMEKARNMALDVD-ILLGALPRGLTPPSAPSDRE 60
          MVA LV ALVLSQA M LG+R+   ++M K   + +DV+ +LLGALP+G TPPSAPS+R 
Sbjct: 9  MVALLVVALVLSQAHMSLGIRKLSNKEM-KMVPIGVDVNYMLLGALPKGPTPPSAPSERG 68

Query: 61 NPAPFSGSDRVLVSAAPSPEMGH 82
          NPAPFS  DRVLVSA PSP +GH
Sbjct: 69 NPAPFSDGDRVLVSA-PSPGIGH 89

BLAST of MC11g0816 vs. NCBI nr
Match: KAA0066754.1 (hypothetical protein E6C27_scaffold271G00930 [Cucumis melo var. makuwa] >TYK27901.1 hypothetical protein E5676_scaffold384G00860 [Cucumis melo var. makuwa])

HSP 1 Score: 86.3 bits (212), Expect = 6.82e-20
Identity = 52/83 (62.65%), Postives = 62/83 (74.70%), Query Frame = 0

Query: 1  MVAFLVAALVLSQADMGLGLRRFPKRKMEKARNMALDVD-ILLGALPRGLTPPSAPSDRE 60
          MVA LV A VL QA M LG+R+   ++M K   M +DV+ +LLGALP+G TPPSAPS+R 
Sbjct: 9  MVALLVVASVLCQAHMSLGIRKLSNKEM-KMVPMGVDVNYMLLGALPKGPTPPSAPSERG 68

Query: 61 NPAPFSGSDRVLVSAAPSPEMGH 82
          NPAPFS  DRVLVSA PSP +GH
Sbjct: 69 NPAPFSDGDRVLVSA-PSPGIGH 89

BLAST of MC11g0816 vs. NCBI nr
Match: KAG6607932.1 (hypothetical protein SDJN03_01274, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 58.5 bits (140), Expect = 4.12e-09
Identity = 33/66 (50.00%), Postives = 41/66 (62.12%), Query Frame = 0

Query: 1  MVAFLVAALVLSQADMGLGLRRFPKRKMEKARNMALDVDILLGALPRGLTPPSAPSDREN 60
          M A L  A +L Q    L +R F  +  +      +D D+LLG+LPRG  PPSAPS+REN
Sbjct: 8  MAACLFLAFLLCQPHTTLAIRSFYHKDTKLPSMGVVDFDMLLGSLPRGPIPPSAPSNREN 67

Query: 61 PAPFSG 66
          PAPFSG
Sbjct: 68 PAPFSG 73

BLAST of MC11g0816 vs. ExPASy TrEMBL
Match: A0A0A0KZH3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G625050 PE=4 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 2.84e-21
Identity = 53/83 (63.86%), Postives = 64/83 (77.11%), Query Frame = 0

Query: 1  MVAFLVAALVLSQADMGLGLRRFPKRKMEKARNMALDVD-ILLGALPRGLTPPSAPSDRE 60
          MVA LV ALVLSQA M LG+R+   ++M K   + +DV+ +LLGALP+G TPPSAPS+R 
Sbjct: 9  MVALLVVALVLSQAHMSLGIRKLSNKEM-KMVPIGVDVNYMLLGALPKGPTPPSAPSERG 68

Query: 61 NPAPFSGSDRVLVSAAPSPEMGH 82
          NPAPFS  DRVLVSA PSP +GH
Sbjct: 69 NPAPFSDGDRVLVSA-PSPGIGH 89

BLAST of MC11g0816 vs. ExPASy TrEMBL
Match: A0A5A7VHE0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G00860 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 3.30e-20
Identity = 52/83 (62.65%), Postives = 62/83 (74.70%), Query Frame = 0

Query: 1  MVAFLVAALVLSQADMGLGLRRFPKRKMEKARNMALDVD-ILLGALPRGLTPPSAPSDRE 60
          MVA LV A VL QA M LG+R+   ++M K   M +DV+ +LLGALP+G TPPSAPS+R 
Sbjct: 9  MVALLVVASVLCQAHMSLGIRKLSNKEM-KMVPMGVDVNYMLLGALPKGPTPPSAPSERG 68

Query: 61 NPAPFSGSDRVLVSAAPSPEMGH 82
          NPAPFS  DRVLVSA PSP +GH
Sbjct: 69 NPAPFSDGDRVLVSA-PSPGIGH 89

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KGN55050.15.87e-2163.86hypothetical protein Csa_012928 [Cucumis sativus][more]
KAA0066754.16.82e-2062.65hypothetical protein E6C27_scaffold271G00930 [Cucumis melo var. makuwa] >TYK2790... [more]
KAG6607932.14.12e-0950.00hypothetical protein SDJN03_01274, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
A0A0A0KZH32.84e-2163.86Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G625050 PE=4 SV=1[more]
A0A5A7VHE03.30e-2062.65Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 47..82

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC11g0816.1MC11g0816.1mRNA