MC11g0740 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC11g0740
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionAt4g19430
LocationMC11: 5974492 .. 5974824 (-)
RNA-Seq ExpressionMC11g0740
SyntenyMC11g0740
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAAGAAAGAAAAAAAAAAGATCAATTTTAATGAGAGAGAGAGAGAAAGGAGTGGCCATTGTGCATACAGGGAAATGGTGAGTGAGCTTGGAGATGGCAAAGGAAAAAGAAGAAAAAGAAGAAAGAAGACTCAATTCGGGGCTGTTTTTCAGTTGAATTTGTGGTACTTTGCTTCAACAATCAGCCATATCTTAAGGAAGGCCAAAGCCTTCTACAATGAGTGTTGCTGTGATGCCTATGAGGATGGGAAGATTGTTGAAGTTACTTTGGTTGATCCTTATTTCTCAATGCCTGCTTTGCCTTGTACTTCTTATTCTATGGCTAATTGTATG

mRNA sequence

AAAAAGAAAGAAAAAAAAAAGATCAATTTTAATGAGAGAGAGAGAGAAAGGAGTGGCCATTGTGCATACAGGGAAATGGTGAGTGAGCTTGGAGATGGCAAAGGAAAAAGAAGAAAAAGAAGAAAGAAGACTCAATTCGGGGCTGTTTTTCAGTTGAATTTGTGGTACTTTGCTTCAACAATCAGCCATATCTTAAGGAAGGCCAAAGCCTTCTACAATGAGTGTTGCTGTGATGCCTATGAGGATGGGAAGATTGTTGAAGTTACTTTGGTTGATCCTTATTTCTCAATGCCTGCTTTGCCTTGTACTTCTTATTCTATGGCTAATTGTATG

Coding sequence (CDS)

AAAAAGAAAGAAAAAAAAAAGATCAATTTTAATGAGAGAGAGAGAGAAAGGAGTGGCCATTGTGCATACAGGGAAATGGTGAGTGAGCTTGGAGATGGCAAAGGAAAAAGAAGAAAAAGAAGAAAGAAGACTCAATTCGGGGCTGTTTTTCAGTTGAATTTGTGGTACTTTGCTTCAACAATCAGCCATATCTTAAGGAAGGCCAAAGCCTTCTACAATGAGTGTTGCTGTGATGCCTATGAGGATGGGAAGATTGTTGAAGTTACTTTGGTTGATCCTTATTTCTCAATGCCTGCTTTGCCTTGTACTTCTTATTCTATGGCTAATTGTATG

Protein sequence

KKKEKKKINFNERERERSGHCAYREMVSELGDGKGKRRKRRKKTQFGAVFQLNLWYFASTISHILRKAKAFYNECCCDAYEDGKIVEVTLVDPYFSMPALPCTSYSMANCM
Homology
[Close]
BLAST of MC11g0740 vs. NCBI nr
Match: KAA0052276.1 (hypothetical protein E6C27_scaffold207G001040 [Cucumis melo var. makuwa])

HSP 1 Score: 123 bits (309), Expect = 1.46e-33
Identity = 68/116 (58.62%), Postives = 85/116 (73.28%), Query Frame = 0 

Query: 2   KKEKKKINFNERERERSGHCAYREMV--SELGDGKGKRRKRR-KKTQFGA---VFQLNLW 61
           KK +KKI     +RER+G+ +Y+E+   +E GD KG+RR+RR KK QFG    V  +N W
Sbjct: 15  KKGRKKIKRESSKRERNGYYSYKEVSDNAEHGDSKGRRRRRRRKKGQFGTTRDVLHMNFW 74

Query: 62  YFASTISHILRKAKAFYNECCCDAYEDGKIVEVTLVDPYFSMPALPCTSYSMANCM 111
           YF STISHILRKAKAFYNECCCDAYED ++ +   +DPYFSMP LP T+  MANC+
Sbjct: 75  YFTSTISHILRKAKAFYNECCCDAYEDERMFQS--IDPYFSMPVLPYTT--MANCL 126

[Close]
BLAST of MC11g0740 vs. NCBI nr
Match: KAG6608012.1 (hypothetical protein SDJN03_01354, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 122 bits (306), Expect = 4.05e-33
Identity = 68/112 (60.71%), Postives = 80/112 (71.43%), Query Frame = 0 

Query: 14  ERERSGHCAYREM----VSELGDGKGKRR-----KRRKKTQFGA---VFQLNLWYFASTI 73
           ERER+GH +  +       + GDGKG+RR     +RRK TQFGA   V Q N+WYF STI
Sbjct: 27  ERERTGHFSTSQHGHHESEQPGDGKGRRREKKQGRRRKTTQFGAARQVLQWNMWYFTSTI 86

Query: 74  SHILRKAKAFYNECCCDAYEDGKI--VEVTLVDPYFSMPALPCTSYSMANCM 111
           S+ILRKAKAFYNECCCDAYED ++  VEV +VDPYFSMP  P T+  MANCM
Sbjct: 87  SYILRKAKAFYNECCCDAYEDERMKRVEVAMVDPYFSMPVFPYTT--MANCM 136

[Close]
BLAST of MC11g0740 vs. NCBI nr
Match: XP_022940822.1 (uncharacterized protein LOC111446301 [Cucurbita moschata])

HSP 1 Score: 122 bits (306), Expect = 4.05e-33
Identity = 68/112 (60.71%), Postives = 80/112 (71.43%), Query Frame = 0 

Query: 14  ERERSGHCAYREM----VSELGDGKGKRR-----KRRKKTQFGA---VFQLNLWYFASTI 73
           ERER+GH +  +       + GDGKG+RR     +RRK TQFGA   V Q N+WYF STI
Sbjct: 27  ERERTGHFSTSQHGHHESEQPGDGKGRRRVKKQGRRRKTTQFGAARQVLQWNMWYFTSTI 86

Query: 74  SHILRKAKAFYNECCCDAYEDGKI--VEVTLVDPYFSMPALPCTSYSMANCM 111
           S+ILRKAKAFYNECCCDAYED ++  VEV +VDPYFSMP  P T+  MANCM
Sbjct: 87  SYILRKAKAFYNECCCDAYEDERMKRVEVAMVDPYFSMPVFPYTT--MANCM 136

[Close]
BLAST of MC11g0740 vs. NCBI nr
Match: TYK01842.1 (hypothetical protein E5676_scaffold113G00900 [Cucumis melo var. makuwa])

HSP 1 Score: 122 bits (306), Expect = 4.17e-33
Identity = 67/116 (57.76%), Postives = 85/116 (73.28%), Query Frame = 0 

Query: 2   KKEKKKINFNERERERSGHCAYREMV--SELGDGKGKRRKRR-KKTQFGA---VFQLNLW 61
           KK +K+I     +RER+G+ +Y+E+   +E GD KG+RR+RR KK QFG    V  +N W
Sbjct: 15  KKGRKRIKRESSKRERNGYYSYKEVSDNAEHGDSKGRRRRRRRKKGQFGTTRDVLHMNFW 74

Query: 62  YFASTISHILRKAKAFYNECCCDAYEDGKIVEVTLVDPYFSMPALPCTSYSMANCM 111
           YF STISHILRKAKAFYNECCCDAYED ++ +   +DPYFSMP LP T+  MANC+
Sbjct: 75  YFTSTISHILRKAKAFYNECCCDAYEDERMFQS--IDPYFSMPVLPYTT--MANCL 126

[Close]
BLAST of MC11g0740 vs. NCBI nr
Match: KGN55571.1 (hypothetical protein Csa_012627 [Cucumis sativus])

HSP 1 Score: 120 bits (302), Expect = 1.37e-32
Identity = 68/118 (57.63%), Postives = 84/118 (71.19%), Query Frame = 0 

Query: 2   KKEKKKINFNERERERSGHCAYREMVS--ELGDGKGKRR-KRRKKTQFGA---VFQLNLW 61
           KK KK+I     +RE +G+ +Y+++    E G+ KG+RR KRRKK QFG    V  +N W
Sbjct: 15  KKGKKRIKRESLKRENNGYYSYKDVSDNEEHGESKGRRRRKRRKKGQFGTTRDVLHMNFW 74

Query: 62  YFASTISHILRKAKAFYNECCCDAYEDGKIV--EVTLVDPYFSMPALPCTSYSMANCM 111
           YF STISHILRKAKAFYNECCCDA+ED ++   EV  +DPYFSMP LP T+  MANCM
Sbjct: 75  YFTSTISHILRKAKAFYNECCCDAFEDERMKKNEVISIDPYFSMPVLPYTT--MANCM 130

[Close]
BLAST of MC11g0740 vs. ExPASy TrEMBL
Match: A0A5A7UDK1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold207G001040 PE=4 SV=1)

HSP 1 Score: 123 bits (309), Expect = 7.07e-34
Identity = 68/116 (58.62%), Postives = 85/116 (73.28%), Query Frame = 0 

Query: 2   KKEKKKINFNERERERSGHCAYREMV--SELGDGKGKRRKRR-KKTQFGA---VFQLNLW 61
           KK +KKI     +RER+G+ +Y+E+   +E GD KG+RR+RR KK QFG    V  +N W
Sbjct: 15  KKGRKKIKRESSKRERNGYYSYKEVSDNAEHGDSKGRRRRRRRKKGQFGTTRDVLHMNFW 74

Query: 62  YFASTISHILRKAKAFYNECCCDAYEDGKIVEVTLVDPYFSMPALPCTSYSMANCM 111
           YF STISHILRKAKAFYNECCCDAYED ++ +   +DPYFSMP LP T+  MANC+
Sbjct: 75  YFTSTISHILRKAKAFYNECCCDAYEDERMFQS--IDPYFSMPVLPYTT--MANCL 126

[Close]
BLAST of MC11g0740 vs. ExPASy TrEMBL
Match: A0A6J1FKP2 (uncharacterized protein LOC111446301 OS=Cucurbita moschata OX=3662 GN=LOC111446301 PE=4 SV=1)

HSP 1 Score: 122 bits (306), Expect = 1.96e-33
Identity = 68/112 (60.71%), Postives = 80/112 (71.43%), Query Frame = 0 

Query: 14  ERERSGHCAYREM----VSELGDGKGKRR-----KRRKKTQFGA---VFQLNLWYFASTI 73
           ERER+GH +  +       + GDGKG+RR     +RRK TQFGA   V Q N+WYF STI
Sbjct: 27  ERERTGHFSTSQHGHHESEQPGDGKGRRRVKKQGRRRKTTQFGAARQVLQWNMWYFTSTI 86

Query: 74  SHILRKAKAFYNECCCDAYEDGKI--VEVTLVDPYFSMPALPCTSYSMANCM 111
           S+ILRKAKAFYNECCCDAYED ++  VEV +VDPYFSMP  P T+  MANCM
Sbjct: 87  SYILRKAKAFYNECCCDAYEDERMKRVEVAMVDPYFSMPVFPYTT--MANCM 136

[Close]
BLAST of MC11g0740 vs. ExPASy TrEMBL
Match: A0A5D3BSQ8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold113G00900 PE=4 SV=1)

HSP 1 Score: 122 bits (306), Expect = 2.02e-33
Identity = 67/116 (57.76%), Postives = 85/116 (73.28%), Query Frame = 0 

Query: 2   KKEKKKINFNERERERSGHCAYREMV--SELGDGKGKRRKRR-KKTQFGA---VFQLNLW 61
           KK +K+I     +RER+G+ +Y+E+   +E GD KG+RR+RR KK QFG    V  +N W
Sbjct: 15  KKGRKRIKRESSKRERNGYYSYKEVSDNAEHGDSKGRRRRRRRKKGQFGTTRDVLHMNFW 74

Query: 62  YFASTISHILRKAKAFYNECCCDAYEDGKIVEVTLVDPYFSMPALPCTSYSMANCM 111
           YF STISHILRKAKAFYNECCCDAYED ++ +   +DPYFSMP LP T+  MANC+
Sbjct: 75  YFTSTISHILRKAKAFYNECCCDAYEDERMFQS--IDPYFSMPVLPYTT--MANCL 126

[Close]
BLAST of MC11g0740 vs. ExPASy TrEMBL
Match: A0A0A0L609 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G669230 PE=4 SV=1)

HSP 1 Score: 120 bits (302), Expect = 6.66e-33
Identity = 68/118 (57.63%), Postives = 84/118 (71.19%), Query Frame = 0 

Query: 2   KKEKKKINFNERERERSGHCAYREMVS--ELGDGKGKRR-KRRKKTQFGA---VFQLNLW 61
           KK KK+I     +RE +G+ +Y+++    E G+ KG+RR KRRKK QFG    V  +N W
Sbjct: 15  KKGKKRIKRESLKRENNGYYSYKDVSDNEEHGESKGRRRRKRRKKGQFGTTRDVLHMNFW 74

Query: 62  YFASTISHILRKAKAFYNECCCDAYEDGKIV--EVTLVDPYFSMPALPCTSYSMANCM 111
           YF STISHILRKAKAFYNECCCDA+ED ++   EV  +DPYFSMP LP T+  MANCM
Sbjct: 75  YFTSTISHILRKAKAFYNECCCDAFEDERMKKNEVISIDPYFSMPVLPYTT--MANCM 130

[Close]
BLAST of MC11g0740 vs. ExPASy TrEMBL
Match: A0A1Q3D8H6 (Uncharacterized protein (Fragment) OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_32173 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 6.11e-16
Identity = 34/53 (64.15%), Postives = 43/53 (81.13%), Query Frame = 0 

Query: 51  QLNLWYFASTISHILRKAKAFYNECCCDAYEDGKIV--EVTLVDPYFSMPALP 101
           +L +WY  S+IS+ILRKAKAFYNECCCDA+ED  ++  +VTLVD YFS P +P
Sbjct: 57  RLGIWYMTSSISYILRKAKAFYNECCCDAFEDPVLMGKQVTLVDSYFSTPVVP 109

[Close]
BLAST of MC11g0740 vs. TAIR 10
Match: AT4G19430.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 63.2 bits (152), Expect = 1.6e-10
Identity = 27/47 (57.45%), Postives = 34/47 (72.34%), Query Frame = 0 

Query: 54  LWYFASTISHILRKAKAFYNECCCDAYEDGKIVEVTLVDPYFSMPAL 101
           LWY   +ISHILRKA+AFYNE CCD Y +   + V  V+PYFS+P +
Sbjct: 115 LWYMKCSISHILRKARAFYNEFCCDTYAESNTMAV--VEPYFSIPVI 159

The following BLAST results are available for this feature:
BLAST of MC11g0740 vs.
Match NameE-valueIdentityDescription
BLAST of MC11g0740 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0052276.11.46e-3358.62hypothetical protein E6C27_scaffold207G001040 [Cucumis melo var. makuwa][more]
KAG6608012.14.05e-3360.71hypothetical protein SDJN03_01354, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022940822.14.05e-3360.71uncharacterized protein LOC111446301 [Cucurbita moschata][more]
TYK01842.14.17e-3357.76hypothetical protein E5676_scaffold113G00900 [Cucumis melo var. makuwa][more]
KGN55571.11.37e-3257.63hypothetical protein Csa_012627 [Cucumis sativus][more]
BLAST of MC11g0740 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7UDK17.07e-3458.62Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A6J1FKP21.96e-3360.71uncharacterized protein LOC111446301 OS=Cucurbita moschata OX=3662 GN=LOC1114463... [more]
A0A5D3BSQ82.02e-3357.76Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0L6096.66e-3357.63Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G669230 PE=4 SV=1[more]
A0A1Q3D8H66.11e-1664.15Uncharacterized protein (Fragment) OS=Cephalotus follicularis OX=3775 GN=CFOL_v3... [more]
BLAST of MC11g0740 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G19430.11.6e-1057.45unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC11g0740.1MC11g0740.1mRNA