MC11g0477 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC11g0477
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionDNA-directed RNA polymerase subunit beta
LocationMC11: 3692304 .. 3695334 (+)
RNA-Seq ExpressionMC11g0477
SyntenyMC11g0477
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5CDSpolypeptideutr3
Hold the cursor over a type above to highlight its positions in the sequence below.
GGCTAAAGTCTAAAATGGTAAGTTGGCCAAATAAATAAAATCTACGCCTCACCTCCAAAACGCCAAAAAACATCGACCATCGATTTCGAGGAGGAGGAGGAGGAGAAGAAAAAAAAAAGGAGGGAAGGGAAATAGTTTTCTCCAGCGGAATAGGATGTCATGTTGTTCATCCCTATCAGCTGCTCCTACCTCCATGTCTTTGATTACCAAGCGCAAATTCCCGATTGCTGTTGACAAACCTGCGATCGTTTCCATGAATTCTCGATTTAGAGCTTCCGCTGAAGTTCCTGATTTTCTCCCCGCAGATTGGTGCGACACTAACCTATAGAATTACGCTTTTTCACTATTCCTTGTAATTTGTTGAGTTTTCGAATAGTATTACCGAGAAACGAAGTTTGATATCGAGAGGAATGGAAAATTGATTTTGCTCATGTTCGCAGATTGGTGCGCTTGCGAACCTAGAGAAAATCATGCTTTTGCACTCCATTATCAATTTTTGAGTTTTCGCATAGTATTATCGAGTAACGAAGTTCGATCTCGAGAGGAATGGAAAATTGATTTTTCTCATGTTCGCAGATTGGTGCGCTTGCGAACCTAGAGAAAATTATGCTTTTGCACTCTTCATTATCATTTTTTGAGTTTTCGCATAGTATTATCAAATAACGAGGTTTGATCTAGATGAATGGAAATTTGATTTTGCTCATGTTCGACTGTGAATGGTCGTATCTGAGATGTTTCAATTCACTTCATGTTTTTATCAAGAAATATGGCATGATTGTGTTTCTTATCACCCTGAAATTACCGAGTTCAACAATTGGATGTTTGGCTTCCATCAGGTCTACTCTTTCGGCTAATGGGGCAAATTCTTTCTTCTTGTCTTAATCTTCCATTCTCCATAAACTTCCACGAGCAACTACACAATTTTCTCGTTCCTCTGATGTGAAGGTTTCTGGAAATGAATCTCTGCAAAGATATCAAATTCCTATTCATTAGGTTTTCCATGATAAGATGATGACTTTGCTGTTGTTATTATACTGTTGTTGGGCCAAACCAGTTTCATGAAATCTGAACTTCTTCATTTATTTTATTTTGTAGGAATGAAGCACACAAGAAGAATCCTCTAGGTCCAAGTTTACATGTAACTGTTCAACTATGCAAGTTAGTACTAGATTTTGTAGTCGTTTCTCTGTCAATTAACTTTATCTTGAAACTTTCTATAGTTTACTGCAGAGGAAGCTATTCAACACCAGCTTGATGCACTGAGATACAACGATCAACCCCATCAAGATTATGGAATCGAGGTCATGTACCAGGTAGTGTGCATTATAAAGTGGCTTATTTATGCCATCTTGATCGCTTGTGTAATGACATGGTGGCCTGTTTATTCAATGCCTCTGATATATAACAGTTTGCTGGATTCGATCCTCTTCGAAGGTCTACATATTTCGGTCCCTTCTTTGATTTGGGACAGGTATCATTTGAAACTTAACAATTAACATGTGTTGTACCGTATCTGCTCATTCCTTTCTTCATTTGCTGTATTTTTTGATGGTGCAGTTTGAGAGATTCAGACGAGTGTTCCATCATTCGACCTATCGTGTATTGCTAGGCCATAAAGAGAGGAAGATCTTGAGCTGTTTGTTTGTAGAGGAGGTAAAGCAGTCTTGATAATGAACTTGATCGATTCTTGTGTCTAGTAGCCAATGATCCCATGATGTGCTTAAGTGCTCTGAGTACTTTTTTGTGCCTTCTATGCCAGTAAATTTCTTTACTGTAAAGTACTATCCTGTTGATTTTACAAACTGTGAAACAGAACCGATTCAAGCAGCGAGTATGGATACGGGGCTGTCGCCCCAAGGAAGAAGAAATATTTCAATTCACCATGGTTCAGGTTAGACTACGTTCTTTTGAATATGTAATCATTAGTAATCTGCAAAGATTGCTTTTGTCTCTAGATTATATGATAAACAAATTCATAGTACCATTAGGTTGATGCCCCCATCAAAAAGATTTCTCTGGAGAATTGAACACTTGAACCTGTAGATTTTCTTTCATTCCCTCTGTTGCCAGTCAATTCATAATCAATCAGTTTTGAACCTATTACAGTCCACACCCACTTATTTGTTGAGAATGTCATGATTCAAGCCACCCACCTGAATACACTTGAACGACGAGTTCTGTTTCAATATAGCTATCATTATATAGGAATTATAACCTCCTTAGGATTAATGTGGGTGGGCCATGAGCATAATATGTATAAAAAACACGTCTTTAACTAAAATGGTTCCACATGGAAATCTAAGGATATAGACTGTTAACACCTCAATAGAGAAACCCTCTTTTAAGAATCACAGCCATTTCAATCTTGAACAGTCTTCCTTTTCATCTATCAACGAAAAGTTGTTTCTTGTTCAAAAAAAGAATCACGACGATTTCCCTTTTCGAGATCAAACTTCAAGGAACAACCTTAAACACTGAAGCTAGCTGTCTACTTCTGTTTTATAAAGCTGTGTATTCATCTATATATTTGAGAATTGATGAGAAGATCCATACTGACATTAAGTGTGGTAGACTGAGATAGACTTGTTTAAGTTGGAAGTAATTATAAAATCATAAACATACTGATATGCGTTCAATTATTTCTGAAACTTTGGGTTTTTGTTGGCAGAGGGTTGGTGGCTCATGGGATGGGTATTGGCTTACAGAGAGCTTACTTAATGATGGGGATGCATTTAGTGGAGGCTTAGCGTACTGAGAATGCTCTCCTCAAATTGGGTGCCTGGTTAGCAAACTTAGCATGATATTGTTCAATTTGTATATTTGAAATGTATATCATACGCCTGTAAGATCACATAACTTAGAATTTGTATATAATATTAACATAGTTACATTCTATCATTTGAGAATCCCCTTTGAGTCGGTTTGGGTTGGTCAGATTCTTCGAGTGATCGAGTTCTTTGAACACTCCAATAGACCATATCAATAATAGTATGATATATCTATCGAAACAAACAAAGTGTGTTACCCTCTA

mRNA sequence

GGCTAAAGTCTAAAATGGTAAGTTGGCCAAATAAATAAAATCTACGCCTCACCTCCAAAACGCCAAAAAACATCGACCATCGATTTCGAGGAGGAGGAGGAGGAGAAGAAAAAAAAAAGGAGGGAAGGGAAATAGTTTTCTCCAGCGGAATAGGATGTCATGTTGTTCATCCCTATCAGCTGCTCCTACCTCCATGTCTTTGATTACCAAGCGCAAATTCCCGATTGCTGTTGACAAACCTGCGATCGTTTCCATGAATTCTCGATTTAGAGCTTCCGCTGAAGTTCCTGATTTTCTCCCCGCAGATTGGAATGAAGCACACAAGAAGAATCCTCTAGGTCCAAGTTTACATTTTACTGCAGAGGAAGCTATTCAACACCAGCTTGATGCACTGAGATACAACGATCAACCCCATCAAGATTATGGAATCGAGGTCATGTACCAGTTTGCTGGATTCGATCCTCTTCGAAGGTCTACATATTTCGGTCCCTTCTTTGATTTGGGACAGTTTGAGAGATTCAGACGAGTGTTCCATCATTCGACCTATCGTGTATTGCTAGGCCATAAAGAGAGGAAGATCTTGAGCTGTTTGTTTGTAGAGGAGAACCGATTCAAGCAGCGAGTATGGATACGGGGCTGTCGCCCCAAGGAAGAAGAAATATTTCAATTCACCATGGTTCAGAGGGTTGGTGGCTCATGGGATGGGTATTGGCTTACAGAGAGCTTACTTAATGATGGGGATGCATTTAGTGGAGGCTTAGCGTACTGAGAATGCTCTCCTCAAATTGGGTGCCTGGTTAGCAAACTTAGCATGATATTGTTCAATTTGTATATTTGAAATGTATATCATACGCCTGTAAGATCACATAACTTAGAATTTGTATATAATATTAACATAGTTACATTCTATCATTTGAGAATCCCCTTTGAGTCGGTTTGGGTTGGTCAGATTCTTCGAGTGATCGAGTTCTTTGAACACTCCAATAGACCATATCAATAATAGTATGATATATCTATCGAAACAAACAAAGTGTGTTACCCTCTA

Coding sequence (CDS)

ATGTCATGTTGTTCATCCCTATCAGCTGCTCCTACCTCCATGTCTTTGATTACCAAGCGCAAATTCCCGATTGCTGTTGACAAACCTGCGATCGTTTCCATGAATTCTCGATTTAGAGCTTCCGCTGAAGTTCCTGATTTTCTCCCCGCAGATTGGAATGAAGCACACAAGAAGAATCCTCTAGGTCCAAGTTTACATTTTACTGCAGAGGAAGCTATTCAACACCAGCTTGATGCACTGAGATACAACGATCAACCCCATCAAGATTATGGAATCGAGGTCATGTACCAGTTTGCTGGATTCGATCCTCTTCGAAGGTCTACATATTTCGGTCCCTTCTTTGATTTGGGACAGTTTGAGAGATTCAGACGAGTGTTCCATCATTCGACCTATCGTGTATTGCTAGGCCATAAAGAGAGGAAGATCTTGAGCTGTTTGTTTGTAGAGGAGAACCGATTCAAGCAGCGAGTATGGATACGGGGCTGTCGCCCCAAGGAAGAAGAAATATTTCAATTCACCATGGTTCAGAGGGTTGGTGGCTCATGGGATGGGTATTGGCTTACAGAGAGCTTACTTAATGATGGGGATGCATTTAGTGGAGGCTTAGCGTACTGA

Protein sequence

MSCCSSLSAAPTSMSLITKRKFPIAVDKPAIVSMNSRFRASAEVPDFLPADWNEAHKKNPLGPSLHFTAEEAIQHQLDALRYNDQPHQDYGIEVMYQFAGFDPLRRSTYFGPFFDLGQFERFRRVFHHSTYRVLLGHKERKILSCLFVEENRFKQRVWIRGCRPKEEEIFQFTMVQRVGGSWDGYWLTESLLNDGDAFSGGLAY
Homology
[Close]
BLAST of MC11g0477 vs. NCBI nr
Match: XP_022132533.1 (uncharacterized protein LOC111005365 isoform X1 [Momordica charantia])

HSP 1 Score: 425 bits (1093), Expect = 2.15e-150
Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 0 

Query: 1   MSCCSSLSAAPTSMSLITKRKFPIAVDKPAIVSMNSRFRASAEVPDFLPADWNEAHKKNP 60
           MSCCSSLSAAPTSMSLITKRKFPIAVDKPAIVSMNSRFRASAEVPDFLPADWNEAHKKNP
Sbjct: 1   MSCCSSLSAAPTSMSLITKRKFPIAVDKPAIVSMNSRFRASAEVPDFLPADWNEAHKKNP 60

Query: 61  LGPSLHFTAEEAIQHQLDALRYNDQPHQDYGIEVMYQFAGFDPLRRSTYFGPFFDLGQFE 120
           LGPSLHFTAEEAIQHQLDALRYNDQPHQDYGIEVMYQFAGFDPLRRSTYFGPFFDLGQFE
Sbjct: 61  LGPSLHFTAEEAIQHQLDALRYNDQPHQDYGIEVMYQFAGFDPLRRSTYFGPFFDLGQFE 120

Query: 121 RFRRVFHHSTYRVLLGHKERKILSCLFVEENRFKQRVWIRGCRPKEEEIFQFTMVQRVGG 180
           RFRRVFHHSTYRVLLGHKERKILSCLFVEENRFKQRVWIRGCRPKEEEIFQFTMVQRVGG
Sbjct: 121 RFRRVFHHSTYRVLLGHKERKILSCLFVEENRFKQRVWIRGCRPKEEEIFQFTMVQRVGG 180

Query: 181 SWDGYWLTESLLNDGDAFSGGLAY 204
           SWDGYWLTESLLNDGDAFSGGLAY
Sbjct: 181 SWDGYWLTESLLNDGDAFSGGLAY 204

[Close]
BLAST of MC11g0477 vs. NCBI nr
Match: XP_004136341.2 (uncharacterized protein LOC101205248 isoform X1 [Cucumis sativus])

HSP 1 Score: 398 bits (1023), Expect = 1.02e-139
Identity = 190/204 (93.14%), Postives = 198/204 (97.06%), Query Frame = 0 

Query: 1   MSCCSSLSAAPTSMSLITKRKFPIAVDKPAIVSMNSRFRASAEVPDFLPADWNEAHKKNP 60
           MSCCSSLSAAP+SMSLIT RKF  +V+KP IVSMNSRFRASAEVPDFLPADW++AHKK+P
Sbjct: 1   MSCCSSLSAAPSSMSLITNRKFTSSVNKPLIVSMNSRFRASAEVPDFLPADWHDAHKKDP 60

Query: 61  LGPSLHFTAEEAIQHQLDALRYNDQPHQDYGIEVMYQFAGFDPLRRSTYFGPFFDLGQFE 120
           +GP LHFTAEEAIQHQLDALRYND+PHQDYGIEVMYQFAGFDPLRRSTYFGPFFDLGQFE
Sbjct: 61  IGPRLHFTAEEAIQHQLDALRYNDRPHQDYGIEVMYQFAGFDPLRRSTYFGPFFDLGQFE 120

Query: 121 RFRRVFHHSTYRVLLGHKERKILSCLFVEENRFKQRVWIRGCRPKEEEIFQFTMVQRVGG 180
           RFRRVFHHSTYRVLLGHKERKILS LFVEENRFKQRVWIRGCRPKEEEIFQFTMVQRVGG
Sbjct: 121 RFRRVFHHSTYRVLLGHKERKILSSLFVEENRFKQRVWIRGCRPKEEEIFQFTMVQRVGG 180

Query: 181 SWDGYWLTESLLNDGDAFSGGLAY 204
           SWDGYWLTESLLNDGDAFSGGLAY
Sbjct: 181 SWDGYWLTESLLNDGDAFSGGLAY 204

[Close]
BLAST of MC11g0477 vs. NCBI nr
Match: XP_008466381.1 (PREDICTED: uncharacterized protein LOC103503805 [Cucumis melo] >KAA0038797.1 uncharacterized protein E6C27_scaffold92G003520 [Cucumis melo var. makuwa] >TYK31418.1 uncharacterized protein E5676_scaffold455G007270 [Cucumis melo var. makuwa])

HSP 1 Score: 395 bits (1015), Expect = 1.69e-138
Identity = 188/204 (92.16%), Postives = 196/204 (96.08%), Query Frame = 0 

Query: 1   MSCCSSLSAAPTSMSLITKRKFPIAVDKPAIVSMNSRFRASAEVPDFLPADWNEAHKKNP 60
           MSCCSSLSAAP+SMSLIT RKF  +V+KP  VSMNSRFR SAEVPDFLPADW++AHKK+P
Sbjct: 1   MSCCSSLSAAPSSMSLITNRKFTSSVNKPVTVSMNSRFRVSAEVPDFLPADWHDAHKKDP 60

Query: 61  LGPSLHFTAEEAIQHQLDALRYNDQPHQDYGIEVMYQFAGFDPLRRSTYFGPFFDLGQFE 120
           +GP LHFTAEEAIQHQLDALRYND+PHQDYGIEVMYQFAGFDPLRRSTYFGPFFDLGQFE
Sbjct: 61  IGPRLHFTAEEAIQHQLDALRYNDRPHQDYGIEVMYQFAGFDPLRRSTYFGPFFDLGQFE 120

Query: 121 RFRRVFHHSTYRVLLGHKERKILSCLFVEENRFKQRVWIRGCRPKEEEIFQFTMVQRVGG 180
           RFRRVFHHSTYRVLLGHKERKILS LFVEENRFKQRVWIRGCRPKEEEIFQFTMVQRVGG
Sbjct: 121 RFRRVFHHSTYRVLLGHKERKILSSLFVEENRFKQRVWIRGCRPKEEEIFQFTMVQRVGG 180

Query: 181 SWDGYWLTESLLNDGDAFSGGLAY 204
           SWDGYWLTESLLNDGDAFSGGLAY
Sbjct: 181 SWDGYWLTESLLNDGDAFSGGLAY 204

[Close]
BLAST of MC11g0477 vs. NCBI nr
Match: XP_038898556.1 (uncharacterized protein LOC120086152 [Benincasa hispida])

HSP 1 Score: 394 bits (1013), Expect = 1.82e-137
Identity = 189/204 (92.65%), Postives = 196/204 (96.08%), Query Frame = 0 

Query: 1   MSCCSSLSAAPTSMSLITKRKFPIAVDKPAIVSMNSRFRASAEVPDFLPADWNEAHKKNP 60
           MSCCSSLSAAPTSMSLIT RKF  +V+KP IVSM SRFRASAEVPDFLPADW++AHKK+P
Sbjct: 48  MSCCSSLSAAPTSMSLITNRKFTSSVNKPVIVSMYSRFRASAEVPDFLPADWHDAHKKDP 107

Query: 61  LGPSLHFTAEEAIQHQLDALRYNDQPHQDYGIEVMYQFAGFDPLRRSTYFGPFFDLGQFE 120
           +GP LHFTAEEAIQHQLDALRYND+PHQDYGIEVMYQFAGFDPLRRSTYFGPFFDLGQFE
Sbjct: 108 IGPRLHFTAEEAIQHQLDALRYNDRPHQDYGIEVMYQFAGFDPLRRSTYFGPFFDLGQFE 167

Query: 121 RFRRVFHHSTYRVLLGHKERKILSCLFVEENRFKQRVWIRGCRPKEEEIFQFTMVQRVGG 180
           RFRRVFHHSTYRVLLGHKERKILS LFVEEN FKQRVWIRGCRPKEEEIFQFTMVQRVGG
Sbjct: 168 RFRRVFHHSTYRVLLGHKERKILSSLFVEENLFKQRVWIRGCRPKEEEIFQFTMVQRVGG 227

Query: 181 SWDGYWLTESLLNDGDAFSGGLAY 204
           SWDGYWLTESLLNDGDAFSGGLAY
Sbjct: 228 SWDGYWLTESLLNDGDAFSGGLAY 251

[Close]
BLAST of MC11g0477 vs. NCBI nr
Match: XP_022981205.1 (uncharacterized protein LOC111480415 isoform X1 [Cucurbita maxima])

HSP 1 Score: 391 bits (1005), Expect = 5.64e-137
Identity = 188/204 (92.16%), Postives = 197/204 (96.57%), Query Frame = 0 

Query: 1   MSCCSSLSAAPTSMSLITKRKFPIAVDKPAIVSMNSRFRASAEVPDFLPADWNEAHKKNP 60
           MSCCSSLSAAPTSMSLI+KRKF  +V+K  IVSMNSRFRASAEVPDFLPADW++AHKKNP
Sbjct: 1   MSCCSSLSAAPTSMSLISKRKFTRSVNKHVIVSMNSRFRASAEVPDFLPADWHQAHKKNP 60

Query: 61  LGPSLHFTAEEAIQHQLDALRYNDQPHQDYGIEVMYQFAGFDPLRRSTYFGPFFDLGQFE 120
           LGPSLHFTAEEAIQ QLDALRYND+PHQDYGIEVMYQFAGF+PL+RSTYFGPFFDLGQFE
Sbjct: 61  LGPSLHFTAEEAIQRQLDALRYNDRPHQDYGIEVMYQFAGFNPLQRSTYFGPFFDLGQFE 120

Query: 121 RFRRVFHHSTYRVLLGHKERKILSCLFVEENRFKQRVWIRGCRPKEEEIFQFTMVQRVGG 180
           RFRRVFHHSTYRVLLGHKERKILS L VEENRFKQRVWIRGCRPKEEEIFQFTMVQRVGG
Sbjct: 121 RFRRVFHHSTYRVLLGHKERKILSSLIVEENRFKQRVWIRGCRPKEEEIFQFTMVQRVGG 180

Query: 181 SWDGYWLTESLLNDGDAFSGGLAY 204
           SWDGYWLTES+LNDGDAFSGGLAY
Sbjct: 181 SWDGYWLTESVLNDGDAFSGGLAY 204

[Close]
BLAST of MC11g0477 vs. ExPASy TrEMBL
Match: A0A6J1BWI6 (uncharacterized protein LOC111005365 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111005365 PE=4 SV=1)

HSP 1 Score: 425 bits (1093), Expect = 1.04e-150
Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 0 

Query: 1   MSCCSSLSAAPTSMSLITKRKFPIAVDKPAIVSMNSRFRASAEVPDFLPADWNEAHKKNP 60
           MSCCSSLSAAPTSMSLITKRKFPIAVDKPAIVSMNSRFRASAEVPDFLPADWNEAHKKNP
Sbjct: 1   MSCCSSLSAAPTSMSLITKRKFPIAVDKPAIVSMNSRFRASAEVPDFLPADWNEAHKKNP 60

Query: 61  LGPSLHFTAEEAIQHQLDALRYNDQPHQDYGIEVMYQFAGFDPLRRSTYFGPFFDLGQFE 120
           LGPSLHFTAEEAIQHQLDALRYNDQPHQDYGIEVMYQFAGFDPLRRSTYFGPFFDLGQFE
Sbjct: 61  LGPSLHFTAEEAIQHQLDALRYNDQPHQDYGIEVMYQFAGFDPLRRSTYFGPFFDLGQFE 120

Query: 121 RFRRVFHHSTYRVLLGHKERKILSCLFVEENRFKQRVWIRGCRPKEEEIFQFTMVQRVGG 180
           RFRRVFHHSTYRVLLGHKERKILSCLFVEENRFKQRVWIRGCRPKEEEIFQFTMVQRVGG
Sbjct: 121 RFRRVFHHSTYRVLLGHKERKILSCLFVEENRFKQRVWIRGCRPKEEEIFQFTMVQRVGG 180

Query: 181 SWDGYWLTESLLNDGDAFSGGLAY 204
           SWDGYWLTESLLNDGDAFSGGLAY
Sbjct: 181 SWDGYWLTESLLNDGDAFSGGLAY 204

[Close]
BLAST of MC11g0477 vs. ExPASy TrEMBL
Match: A0A0A0LED5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G878870 PE=4 SV=1)

HSP 1 Score: 398 bits (1023), Expect = 4.92e-140
Identity = 190/204 (93.14%), Postives = 198/204 (97.06%), Query Frame = 0 

Query: 1   MSCCSSLSAAPTSMSLITKRKFPIAVDKPAIVSMNSRFRASAEVPDFLPADWNEAHKKNP 60
           MSCCSSLSAAP+SMSLIT RKF  +V+KP IVSMNSRFRASAEVPDFLPADW++AHKK+P
Sbjct: 1   MSCCSSLSAAPSSMSLITNRKFTSSVNKPLIVSMNSRFRASAEVPDFLPADWHDAHKKDP 60

Query: 61  LGPSLHFTAEEAIQHQLDALRYNDQPHQDYGIEVMYQFAGFDPLRRSTYFGPFFDLGQFE 120
           +GP LHFTAEEAIQHQLDALRYND+PHQDYGIEVMYQFAGFDPLRRSTYFGPFFDLGQFE
Sbjct: 61  IGPRLHFTAEEAIQHQLDALRYNDRPHQDYGIEVMYQFAGFDPLRRSTYFGPFFDLGQFE 120

Query: 121 RFRRVFHHSTYRVLLGHKERKILSCLFVEENRFKQRVWIRGCRPKEEEIFQFTMVQRVGG 180
           RFRRVFHHSTYRVLLGHKERKILS LFVEENRFKQRVWIRGCRPKEEEIFQFTMVQRVGG
Sbjct: 121 RFRRVFHHSTYRVLLGHKERKILSSLFVEENRFKQRVWIRGCRPKEEEIFQFTMVQRVGG 180

Query: 181 SWDGYWLTESLLNDGDAFSGGLAY 204
           SWDGYWLTESLLNDGDAFSGGLAY
Sbjct: 181 SWDGYWLTESLLNDGDAFSGGLAY 204

[Close]
BLAST of MC11g0477 vs. ExPASy TrEMBL
Match: A0A5D3E6H6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G007270 PE=4 SV=1)

HSP 1 Score: 395 bits (1015), Expect = 8.16e-139
Identity = 188/204 (92.16%), Postives = 196/204 (96.08%), Query Frame = 0 

Query: 1   MSCCSSLSAAPTSMSLITKRKFPIAVDKPAIVSMNSRFRASAEVPDFLPADWNEAHKKNP 60
           MSCCSSLSAAP+SMSLIT RKF  +V+KP  VSMNSRFR SAEVPDFLPADW++AHKK+P
Sbjct: 1   MSCCSSLSAAPSSMSLITNRKFTSSVNKPVTVSMNSRFRVSAEVPDFLPADWHDAHKKDP 60

Query: 61  LGPSLHFTAEEAIQHQLDALRYNDQPHQDYGIEVMYQFAGFDPLRRSTYFGPFFDLGQFE 120
           +GP LHFTAEEAIQHQLDALRYND+PHQDYGIEVMYQFAGFDPLRRSTYFGPFFDLGQFE
Sbjct: 61  IGPRLHFTAEEAIQHQLDALRYNDRPHQDYGIEVMYQFAGFDPLRRSTYFGPFFDLGQFE 120

Query: 121 RFRRVFHHSTYRVLLGHKERKILSCLFVEENRFKQRVWIRGCRPKEEEIFQFTMVQRVGG 180
           RFRRVFHHSTYRVLLGHKERKILS LFVEENRFKQRVWIRGCRPKEEEIFQFTMVQRVGG
Sbjct: 121 RFRRVFHHSTYRVLLGHKERKILSSLFVEENRFKQRVWIRGCRPKEEEIFQFTMVQRVGG 180

Query: 181 SWDGYWLTESLLNDGDAFSGGLAY 204
           SWDGYWLTESLLNDGDAFSGGLAY
Sbjct: 181 SWDGYWLTESLLNDGDAFSGGLAY 204

[Close]
BLAST of MC11g0477 vs. ExPASy TrEMBL
Match: A0A1S3CR52 (uncharacterized protein LOC103503805 OS=Cucumis melo OX=3656 GN=LOC103503805 PE=4 SV=1)

HSP 1 Score: 395 bits (1015), Expect = 8.16e-139
Identity = 188/204 (92.16%), Postives = 196/204 (96.08%), Query Frame = 0 

Query: 1   MSCCSSLSAAPTSMSLITKRKFPIAVDKPAIVSMNSRFRASAEVPDFLPADWNEAHKKNP 60
           MSCCSSLSAAP+SMSLIT RKF  +V+KP  VSMNSRFR SAEVPDFLPADW++AHKK+P
Sbjct: 1   MSCCSSLSAAPSSMSLITNRKFTSSVNKPVTVSMNSRFRVSAEVPDFLPADWHDAHKKDP 60

Query: 61  LGPSLHFTAEEAIQHQLDALRYNDQPHQDYGIEVMYQFAGFDPLRRSTYFGPFFDLGQFE 120
           +GP LHFTAEEAIQHQLDALRYND+PHQDYGIEVMYQFAGFDPLRRSTYFGPFFDLGQFE
Sbjct: 61  IGPRLHFTAEEAIQHQLDALRYNDRPHQDYGIEVMYQFAGFDPLRRSTYFGPFFDLGQFE 120

Query: 121 RFRRVFHHSTYRVLLGHKERKILSCLFVEENRFKQRVWIRGCRPKEEEIFQFTMVQRVGG 180
           RFRRVFHHSTYRVLLGHKERKILS LFVEENRFKQRVWIRGCRPKEEEIFQFTMVQRVGG
Sbjct: 121 RFRRVFHHSTYRVLLGHKERKILSSLFVEENRFKQRVWIRGCRPKEEEIFQFTMVQRVGG 180

Query: 181 SWDGYWLTESLLNDGDAFSGGLAY 204
           SWDGYWLTESLLNDGDAFSGGLAY
Sbjct: 181 SWDGYWLTESLLNDGDAFSGGLAY 204

[Close]
BLAST of MC11g0477 vs. ExPASy TrEMBL
Match: A0A6J1IYU2 (uncharacterized protein LOC111480415 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111480415 PE=4 SV=1)

HSP 1 Score: 391 bits (1005), Expect = 2.73e-137
Identity = 188/204 (92.16%), Postives = 197/204 (96.57%), Query Frame = 0 

Query: 1   MSCCSSLSAAPTSMSLITKRKFPIAVDKPAIVSMNSRFRASAEVPDFLPADWNEAHKKNP 60
           MSCCSSLSAAPTSMSLI+KRKF  +V+K  IVSMNSRFRASAEVPDFLPADW++AHKKNP
Sbjct: 1   MSCCSSLSAAPTSMSLISKRKFTRSVNKHVIVSMNSRFRASAEVPDFLPADWHQAHKKNP 60

Query: 61  LGPSLHFTAEEAIQHQLDALRYNDQPHQDYGIEVMYQFAGFDPLRRSTYFGPFFDLGQFE 120
           LGPSLHFTAEEAIQ QLDALRYND+PHQDYGIEVMYQFAGF+PL+RSTYFGPFFDLGQFE
Sbjct: 61  LGPSLHFTAEEAIQRQLDALRYNDRPHQDYGIEVMYQFAGFNPLQRSTYFGPFFDLGQFE 120

Query: 121 RFRRVFHHSTYRVLLGHKERKILSCLFVEENRFKQRVWIRGCRPKEEEIFQFTMVQRVGG 180
           RFRRVFHHSTYRVLLGHKERKILS L VEENRFKQRVWIRGCRPKEEEIFQFTMVQRVGG
Sbjct: 121 RFRRVFHHSTYRVLLGHKERKILSSLIVEENRFKQRVWIRGCRPKEEEIFQFTMVQRVGG 180

Query: 181 SWDGYWLTESLLNDGDAFSGGLAY 204
           SWDGYWLTES+LNDGDAFSGGLAY
Sbjct: 181 SWDGYWLTESVLNDGDAFSGGLAY 204

[Close]
BLAST of MC11g0477 vs. TAIR 10
Match: AT2G25605.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; Has 75 Blast hits to 75 proteins in 20 species: Archae - 2; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). )

HSP 1 Score: 287.7 bits (735), Expect = 7.2e-78
Identity = 127/165 (76.97%), Postives = 149/165 (90.30%), Query Frame = 0 

Query: 40  ASAEVPDFLPADWNEAHKKNPLGPSLHFTAEEAIQHQLDALRYNDQPHQDYGIEVMYQFA 99
           +S++VPDFL ADW E+ +K P GP L F+AE+A++HQLDAL+YND P  DYGIEVMY+FA
Sbjct: 36  SSSDVPDFLSADWLESRRKRPFGPRLDFSAEDAVRHQLDALKYNDHPRDDYGIEVMYRFA 95

Query: 100 GFDPLRRSTYFGPFFDLGQFERFRRVFHHSTYRVLLGHKERKILSCLFVEENRFKQRVWI 159
           GFDP  RSTYFGPFFDLGQFERFRR+FHHS+YRVLLGHK+RK+LS LFVEENRFKQR+WI
Sbjct: 96  GFDPFERSTYFGPFFDLGQFERFRRIFHHSSYRVLLGHKDRKLLSSLFVEENRFKQRIWI 155

Query: 160 RGCRPKEEEIFQFTMVQRVGGSWDGYWLTESLLNDGDAFSGGLAY 205
           +G RP+EEEIF+FTM QR+GGSWDGYWLTESLL+DGD FSGG+AY
Sbjct: 156 QGNRPEEEEIFEFTMFQRIGGSWDGYWLTESLLHDGDVFSGGMAY 200

The following BLAST results are available for this feature:
BLAST of MC11g0477 vs.
Match NameE-valueIdentityDescription
BLAST of MC11g0477 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022132533.12.15e-150100.00uncharacterized protein LOC111005365 isoform X1 [Momordica charantia][more]
XP_004136341.21.02e-13993.14uncharacterized protein LOC101205248 isoform X1 [Cucumis sativus][more]
XP_008466381.11.69e-13892.16PREDICTED: uncharacterized protein LOC103503805 [Cucumis melo] >KAA0038797.1 unc... [more]
XP_038898556.11.82e-13792.65uncharacterized protein LOC120086152 [Benincasa hispida][more]
XP_022981205.15.64e-13792.16uncharacterized protein LOC111480415 isoform X1 [Cucurbita maxima][more]
BLAST of MC11g0477 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1BWI61.04e-150100.00uncharacterized protein LOC111005365 isoform X1 OS=Momordica charantia OX=3673 G... [more]
A0A0A0LED54.92e-14093.14Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G878870 PE=4 SV=1[more]
A0A5D3E6H68.16e-13992.16Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3CR528.16e-13992.16uncharacterized protein LOC103503805 OS=Cucumis melo OX=3656 GN=LOC103503805 PE=... [more]
A0A6J1IYU22.73e-13792.16uncharacterized protein LOC111480415 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... [more]
BLAST of MC11g0477 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G25605.17.2e-7876.97unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR35716OS05G0574700 PROTEIN-RELATEDcoord: 1..204
NoneNo IPR availablePANTHERPTHR35716:SF1OS05G0574700 PROTEINcoord: 1..204

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC11g0477.1MC11g0477.1mRNA