MC11g0424 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC11g0424
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	ethylene-responsive transcription factor ERF003-like
Location	MC11: 3342964 .. 3344298 (-)
RNA-Seq Expression	MC11g0424
Synteny	MC11g0424

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5polypeptideCDSutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

AGACGTATTTGTGTCCTAACATAAGTTTTTGGATCATCCGCTGATTAAATTCAACATTCTCCCAACACTTTTGACACCCAAATTGACGAAAAATATTCACATTTTATATTATATTACAAGTTTATGACATGTGAACTGATCTTTTTTTTCTTTTTATTTTTTTATTTTTTTTATGAGTTTCAAACGTCAACTTACTTGTTGTATCAGAAATCAGCAGAGCCATACGCCCAGCCAACTGGTAGGCTATTGGACAAAAATAAGGGCAAAAAAAAGGACTTAATTTAATTTAAACACACTCGTGAGACCCACTAGATATCAAATTGCTTGCCAGAAAGGCCTCAACAAAAATGGCTCCGCGATTGCCGTCTTTGTCAGCAACGAGTAAATATAAAACACCCATTTGCTTCCCTTCTGAGAAACTACGAATTTGTGCTCTGTTTTTCTCTGCGGCATTTTCACAAACACCTTGTGGGGGTCAAAAAACCAGTTATGCCATAGCCATGGCCAGGCCGCAAAAGCGCTACCGTGGCGTACGGCAGCGGCATTGGGGCTCTTGGGTGTCTGAGATTCGGCATCCATTATTGTGGGTCTCCCATTTCTTCTCGATTTCGAAGGTCTTATGATGGTTTTTTTGTTTCCGCCATTGAACTAAAAGTGGGCTGTGCTCTGTTTATGCAGGAAGACGAGGATTTGGCTGGGGACATTTGAGACGGCGGAGGACGCGGCGAGGGCGTACGACGAGGCGGCGAGATTGATGTGTGGGCCAAAAGCGAGGACGAATTTTGCGTACAATCCAAACGGAGTTCAGTGTTGTAAGCTTCTGTCGGCGAATTTAACGGCGAAATTGCATCGGTGCTACGTGGCTTCTCTGCAGATCGGTAGCCAAGGCCCAAGGGGATTCAGAAGAGAGCACCTGGCGGCGCCGGCGCCGGCGCCGGTGGTGGTGATGGAGGAGCAGCCGCCGTATGCGGCGGGGAGGAATGTGAAAAGGGAAAGTGAGTGTGGGGAACTGAAGGTATTGGAGGATGATCATATCGAGCAGATGATTGAGGAGCTTCTTTATTATGGATCCATGGAGTTCTGTTTCTGATCATACCAATTCAAATATAATCTTAATCTTGGGCTTTATAATTAACAAACTACTCGCCGTAGATCCCATGTAAATACAATTTCCCTGGTTTATTTAATCTTTAAAAGTTTTAAGTTTATTTTATTTTAATTTAAACTAAAAAAAATAATATATTTTACCACTCAACTTATAACAATGAAAATTCGAACTCTTATATATGTATATATGTTGTTAAATAATAGATATTTATTAGAGTATTAAAGTTC

mRNA sequence

AGACGTATTTGTGTCCTAACATAAGTTTTTGGATCATCCGCTGATTAAATTCAACATTCTCCCAACACTTTTGACACCCAAATTGACGAAAAATATTCACATTTTATATTATATTACAAGTTTATGACATGTGAACTGATCTTTTTTTTCTTTTTATTTTTTTATTTTTTTTATGAGTTTCAAACGTCAACTTACTTGTTGTATCAGAAATCAGCAGAGCCATACGCCCAGCCAACTGGTAGGCTATTGGACAAAAATAAGGGCAAAAAAAAGGACTTAATTTAATTTAAACACACTCGTGAGACCCACTAGATATCAAATTGCTTGCCAGAAAGGCCTCAACAAAAATGGCTCCGCGATTGCCGTCTTTGTCAGCAACGAGTAAATATAAAACACCCATTTGCTTCCCTTCTGAGAAACTACGAATTTGTGCTCTGTTTTTCTCTGCGGCATTTTCACAAACACCTTGTGGGGGTCAAAAAACCAGTTATGCCATAGCCATGGCCAGGCCGCAAAAGCGCTACCGTGGCGTACGGCAGCGGCATTGGGGCTCTTGGGTGTCTGAGATTCGGCATCCATTATTGAAGACGAGGATTTGGCTGGGGACATTTGAGACGGCGGAGGACGCGGCGAGGGCGTACGACGAGGCGGCGAGATTGATGTGTGGGCCAAAAGCGAGGACGAATTTTGCGTACAATCCAAACGGAGTTCAGTGTTGTAAGCTTCTGTCGGCGAATTTAACGGCGAAATTGCATCGGTGCTACGTGGCTTCTCTGCAGATCGGTAGCCAAGGCCCAAGGGGATTCAGAAGAGAGCACCTGGCGGCGCCGGCGCCGGCGCCGGTGGTGGTGATGGAGGAGCAGCCGCCGTATGCGGCGGGGAGGAATGTGAAAAGGGAAAGTGAGTGTGGGGAACTGAAGGTATTGGAGGATGATCATATCGAGCAGATGATTGAGGAGCTTCTTTATTATGGATCCATGGAGTTCTGTTTCTGATCATACCAATTCAAATATAATCTTAATCTTGGGCTTTATAATTAACAAACTACTCGCCGTAGATCCCATGTAAATACAATTTCCCTGGTTTATTTAATCTTTAAAAGTTTTAAGTTTATTTTATTTTAATTTAAACTAAAAAAAATAATATATTTTACCACTCAACTTATAACAATGAAAATTCGAACTCTTATATATGTATATATGTTGTTAAATAATAGATATTTATTAGAGTATTAAAGTTC

Coding sequence (CDS)

ATGGCTCCGCGATTGCCGTCTTTGTCAGCAACGAGTAAATATAAAACACCCATTTGCTTCCCTTCTGAGAAACTACGAATTTGTGCTCTGTTTTTCTCTGCGGCATTTTCACAAACACCTTGTGGGGGTCAAAAAACCAGTTATGCCATAGCCATGGCCAGGCCGCAAAAGCGCTACCGTGGCGTACGGCAGCGGCATTGGGGCTCTTGGGTGTCTGAGATTCGGCATCCATTATTGAAGACGAGGATTTGGCTGGGGACATTTGAGACGGCGGAGGACGCGGCGAGGGCGTACGACGAGGCGGCGAGATTGATGTGTGGGCCAAAAGCGAGGACGAATTTTGCGTACAATCCAAACGGAGTTCAGTGTTGTAAGCTTCTGTCGGCGAATTTAACGGCGAAATTGCATCGGTGCTACGTGGCTTCTCTGCAGATCGGTAGCCAAGGCCCAAGGGGATTCAGAAGAGAGCACCTGGCGGCGCCGGCGCCGGCGCCGGTGGTGGTGATGGAGGAGCAGCCGCCGTATGCGGCGGGGAGGAATGTGAAAAGGGAAAGTGAGTGTGGGGAACTGAAGGTATTGGAGGATGATCATATCGAGCAGATGATTGAGGAGCTTCTTTATTATGGATCCATGGAGTTCTGTTTCTGA

Protein sequence

MAPRLPSLSATSKYKTPICFPSEKLRICALFFSAAFSQTPCGGQKTSYAIAMARPQKRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFAYNPNGVQCCKLLSANLTAKLHRCYVASLQIGSQGPRGFRREHLAAPAPAPVVVMEEQPPYAAGRNVKRESECGELKVLEDDHIEQMIEELLYYGSMEFCF

Homology

[Close]

BLAST of MC11g0424 vs. ExPASy Swiss-Prot
Match: Q94AW5 (Ethylene-responsive transcription factor ERF003 OS=Arabidopsis thaliana OX=3702 GN=ERF003 PE=1 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 4.2e-49
Identity = 103/173 (59.54%), Postives = 121/173 (69.94%), Query Frame = 0


Query: 52  MARPQKRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 111
           MARPQ+R+RGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGP+AR
Sbjct: 1   MARPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 112 TNFAYNPNGV--QCCKLLSANLTAKLHRCYVASLQIGSQGPRGFRREHLAAPAPAPVVVM 171
           TNF YNPN +     KLLSA LTAKLH+CY+ASLQ+  Q     + +   + +     V 
Sbjct: 61  TNFPYNPNAIPTSSSKLLSATLTAKLHKCYMASLQMTKQTQTQTQTQTARSQSADSDGVT 120

Query: 172 EEQPPYAAGRNVKRESECGE--------LKVLEDDHIEQMIEELLYYGSMEFC 215
             +     G     E +  +         + LE+DHIEQMIEELL+YGS+E C
Sbjct: 121 ANESHLNRGVTETTEIKWEDGNANMQQNFRPLEEDHIEQMIEELLHYGSIELC 173

[Close]

BLAST of MC11g0424 vs. ExPASy Swiss-Prot
Match: P16146 (Protein PPLZ02 OS=Lupinus polyphyllus OX=3874 GN=PPLZ02 PE=2 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 8.0e-40
Identity = 94/164 (57.32%), Postives = 107/164 (65.24%), Query Frame = 0


Query: 52  MARPQKRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 111
           MARPQ+RYRG RQRHWGSWVSEIRH +LKTRIW GTFE+AEDAARAYDEAARLMCG +AR
Sbjct: 1   MARPQQRYRGFRQRHWGSWVSEIRHSILKTRIWQGTFESAEDAARAYDEAARLMCGTRAR 60

Query: 112 TNFAYNPNGVQ--CCKLLSANLTAKLHRCYVASLQIGSQGPRGFRREHLAAPAPAPVVV- 171
           TNF YNPN  Q    KLLSA L AKLHRCY+ASLQ+            +A+P  A   + 
Sbjct: 61  TNFPYNPNASQSSSSKLLSATLIAKLHRCYMASLQMTRPSSLPEAPRIIASPNNAVKGIG 120

Query: 172 --------MEEQPPYAAGRNV---KRESECG-ELKVLEDDHIEQ 201
                     EQ     G N+   K + EC  + K LE+DHI Q
Sbjct: 121 ADAMLLPKKREQEEQETGGNLDFKKVKVECSQQFKPLEEDHIAQ 164

[Close]

BLAST of MC11g0424 vs. ExPASy Swiss-Prot
Match: Q9XI33 (Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana OX=3702 GN=WIN1 PE=2 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 5.2e-23
Identity = 50/63 (79.37%), Postives = 55/63 (87.30%), Query Frame = 0


Query: 57  KRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFAY 116
           K++RGVRQRHWGSWV+EIRHPLLK RIWLGTFETAE+AARAYDEAA LM G  A+TNF  
Sbjct: 5   KKFRGVRQRHWGSWVAEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKTNFPL 64

Query: 117 NPN 120
           N N
Sbjct: 65  NNN 67

[Close]

BLAST of MC11g0424 vs. ExPASy Swiss-Prot
Match: Q3E958 (Ethylene-responsive transcription factor SHINE 3 OS=Arabidopsis thaliana OX=3702 GN=SHN3 PE=2 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 2.4e-20
Identity = 49/74 (66.22%), Postives = 57/74 (77.03%), Query Frame = 0


Query: 57  KRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNF-A 116
           K++RGVRQR WGSWVSEIRHPLLK R+WLGTF+TAE AARAYD+AA LM G  A+TNF  
Sbjct: 5   KKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAETAARAYDQAAVLMNGQSAKTNFPV 64

Query: 117 YNPNGVQCCKLLSA 130
              NG    ++ SA
Sbjct: 65  IKSNGSNSLEINSA 78

[Close]

BLAST of MC11g0424 vs. ExPASy Swiss-Prot
Match: Q9LFN7 (Ethylene-responsive transcription factor SHINE 2 OS=Arabidopsis thaliana OX=3702 GN=SHN2 PE=2 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 3.1e-20
Identity = 45/58 (77.59%), Postives = 51/58 (87.93%), Query Frame = 0


Query: 57  KRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNF 115
           +++RGVRQR WGSWVSEIRHPLLK R+WLGTFETAE AARAYD+AA LM G  A+TNF
Sbjct: 5   RKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAALLMNGQNAKTNF 62

[Close]

BLAST of MC11g0424 vs. NCBI nr
Match: XP_022140148.1 (ethylene-responsive transcription factor ERF003-like [Momordica charantia])

HSP 1 Score: 444 bits (1141), Expect = 2.40e-157
Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 0


Query: 1   MAPRLPSLSATSKYKTPICFPSEKLRICALFFSAAFSQTPCGGQKTSYAIAMARPQKRYR 60
           MAPRLPSLSATSKYKTPICFPSEKLRICALFFSAAFSQTPCGGQKTSYAIAMARPQKRYR
Sbjct: 1   MAPRLPSLSATSKYKTPICFPSEKLRICALFFSAAFSQTPCGGQKTSYAIAMARPQKRYR 60

Query: 61  GVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFAYNPNG 120
           GVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFAYNPNG
Sbjct: 61  GVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFAYNPNG 120

Query: 121 VQCCKLLSANLTAKLHRCYVASLQIGSQGPRGFRREHLAAPAPAPVVVMEEQPPYAAGRN 180
           VQCCKLLSANLTAKLHRCYVASLQIGSQGPRGFRREHLAAPAPAPVVVMEEQPPYAAGRN
Sbjct: 121 VQCCKLLSANLTAKLHRCYVASLQIGSQGPRGFRREHLAAPAPAPVVVMEEQPPYAAGRN 180

Query: 181 VKRESECGELKVLEDDHIEQMIEELLYYGSMEFCF 215
           VKRESECGELKVLEDDHIEQMIEELLYYGSMEFCF
Sbjct: 181 VKRESECGELKVLEDDHIEQMIEELLYYGSMEFCF 215

[Close]

BLAST of MC11g0424 vs. NCBI nr
Match: XP_011654234.1 (ethylene-responsive transcription factor ERF003 [Cucumis sativus] >KAE8649946.1 hypothetical protein Csa_012743 [Cucumis sativus])

HSP 1 Score: 264 bits (675), Expect = 2.64e-86
Identity = 146/227 (64.32%), Postives = 170/227 (74.89%), Query Frame = 0


Query: 1   MAPRLPSLSATSKYKTPICFPSEKLRICALFFSAAFSQTPCGGQKTSYAIAMARPQKRYR 60
           MAPRLP LSA +KYK+PI        +C +F S  F+ T    ++   + AMARPQKRYR
Sbjct: 1   MAPRLPFLSAITKYKSPI--------VCYVFLSRIFTNT-FWEEEIQPSYAMARPQKRYR 60

Query: 61  GVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFAYNPNG 120
           GVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNF Y+P+ 
Sbjct: 61  GVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFPYSPSA 120

Query: 121 VQCC--KLLSANLTAKLHRCYVASLQIGSQGPRGFRREHLAA-PAPAP-------VVVME 180
           +Q    ++LS+NLTAKLHRCY+ASL+I +QG   F+ +  AA PAPA        ++   
Sbjct: 121 IQSSNSRILSSNLTAKLHRCYMASLEISNQGSAEFKSDITAAFPAPASTSSVVEEIIPAV 180

Query: 181 EQPPYAAG---RNVKRESECGELKVLEDDHIEQMIEELLYYGSMEFC 214
           E+ P AA    R+VK ESE GELK+LEDDHIEQMIEEL YYGSMEFC
Sbjct: 181 EEVPCAADWMVRSVKIESEFGELKLLEDDHIEQMIEELRYYGSMEFC 218

[Close]

BLAST of MC11g0424 vs. NCBI nr
Match: XP_008452875.1 (PREDICTED: ethylene-responsive transcription factor ERF003-like [Cucumis melo])

HSP 1 Score: 253 bits (647), Expect = 2.44e-82
Identity = 140/200 (70.00%), Postives = 159/200 (79.50%), Query Frame = 0


Query: 30  LFFSAAFSQTPCGGQ-KTSYAIAMARPQKRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTF 89
           +FFS AFSQTP G + +TSYA  MARPQKRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTF
Sbjct: 1   MFFSHAFSQTPSGEEIQTSYA--MARPQKRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTF 60

Query: 90  ETAEDAARAYDEAARLMCGPKARTNFAYNPNGVQCC--KLLSANLTAKLHRCYVASLQIG 149
           ETAEDAARAYDEAARLMCGPKARTNF Y+ + +Q    ++LS+NLTAKLHRCY+ASLQI 
Sbjct: 61  ETAEDAARAYDEAARLMCGPKARTNFPYSSSAIQSSNSRILSSNLTAKLHRCYMASLQIS 120

Query: 150 SQGP-RGFRREHLAA-PAPAP-------VVVMEEQPPYAAG---RNVKRESECGELKVLE 209
           +QG    F+R+  +A PAPA        ++   E+ P AA    R+VK ESE GELK+LE
Sbjct: 121 NQGSGEEFKRDITSAFPAPASTSSVVEDIIPAAEEGPCAADWMVRSVKMESEFGELKLLE 180

Query: 210 DDHIEQMIEELLYYGSMEFC 214
           DDHIEQMIEEL YYGSMEFC
Sbjct: 181 DDHIEQMIEELRYYGSMEFC 198

[Close]

BLAST of MC11g0424 vs. NCBI nr
Match: XP_038899563.1 (ethylene-responsive transcription factor ERF003-like [Benincasa hispida])

HSP 1 Score: 253 bits (646), Expect = 7.97e-82
Identity = 144/222 (64.86%), Postives = 158/222 (71.17%), Query Frame = 0


Query: 12  SKYKTPICFPSEKLRICALFFSAAFSQTPCGGQKTSYAIAMARPQKRYRGVRQRHWGSWV 71
           +KYK     P+     CALF S         G +    IAMARPQKRYRGVRQRHWGSWV
Sbjct: 2   TKYKNTYFSPAVNYHSCALFCSFGHFHKHLLGCRKLCHIAMARPQKRYRGVRQRHWGSWV 61

Query: 72  SEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFAYNPNGVQCC--KLLSA 131
           SEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNF +NPN +Q    ++LSA
Sbjct: 62  SEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFPFNPNAIQSSSSRILSA 121

Query: 132 NLTAKLHRCYVASLQIGSQGPRGFRREHLAA-PAPAPV--------VVME-----EQPPY 191
           NLTAKLHRCY+ASLQI +Q    F+R+  A  P PAP+        VV E     EQ P 
Sbjct: 122 NLTAKLHRCYMASLQISNQVSGEFKRDVTAPFPEPAPLPCGGVASSVVEEIGTLVEQGPC 181

Query: 192 AAG---RNVKRESECGELKVLEDDHIEQMIEELLYYGSMEFC 214
           AA    R+VK ESE GELK+LEDDHIEQMIEEL YYGSMEFC
Sbjct: 182 AADWMVRSVKIESEFGELKLLEDDHIEQMIEELRYYGSMEFC 223

[Close]

BLAST of MC11g0424 vs. NCBI nr
Match: KAG7031771.1 (Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 221 bits (562), Expect = 6.09e-70
Identity = 120/170 (70.59%), Postives = 132/170 (77.65%), Query Frame = 0


Query: 52  MARPQKRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 111
           MARPQ++YRGVRQRHWGSWVSEIRHP LKTRIWLGTFETAEDAARAYDEAARLMCGP AR
Sbjct: 1   MARPQRQYRGVRQRHWGSWVSEIRHPSLKTRIWLGTFETAEDAARAYDEAARLMCGPNAR 60

Query: 112 TNFAYNPNGVQCC--KLLSANLTAKLHRCYVASLQIGSQGPRGFRRE-----HLAAPAPA 171
           TNF YNPN +Q    K+LSANLTAKLHRCY+ASLQI +Q    F+RE       A+ A A
Sbjct: 61  TNFPYNPNTIQSSNSKILSANLTAKLHRCYMASLQISNQE---FKRELPPPFAAASYADA 120

Query: 172 PVVVMEEQPPYAAGRNVKRESECGELKVLEDDHIEQMIEELLYYGSMEFC 214
              ++EE  P A        +E  ELK+LEDDHIEQMIEELLYYGSMEFC
Sbjct: 121 ARSMVEENRPTAP-----EAAEQEELKLLEDDHIEQMIEELLYYGSMEFC 162

[Close]

BLAST of MC11g0424 vs. ExPASy TrEMBL
Match: A0A6J1CHC9 (ethylene-responsive transcription factor ERF003-like OS=Momordica charantia OX=3673 GN=LOC111010874 PE=4 SV=1)

HSP 1 Score: 444 bits (1141), Expect = 1.16e-157
Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 0


Query: 1   MAPRLPSLSATSKYKTPICFPSEKLRICALFFSAAFSQTPCGGQKTSYAIAMARPQKRYR 60
           MAPRLPSLSATSKYKTPICFPSEKLRICALFFSAAFSQTPCGGQKTSYAIAMARPQKRYR
Sbjct: 1   MAPRLPSLSATSKYKTPICFPSEKLRICALFFSAAFSQTPCGGQKTSYAIAMARPQKRYR 60

Query: 61  GVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFAYNPNG 120
           GVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFAYNPNG
Sbjct: 61  GVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFAYNPNG 120

Query: 121 VQCCKLLSANLTAKLHRCYVASLQIGSQGPRGFRREHLAAPAPAPVVVMEEQPPYAAGRN 180
           VQCCKLLSANLTAKLHRCYVASLQIGSQGPRGFRREHLAAPAPAPVVVMEEQPPYAAGRN
Sbjct: 121 VQCCKLLSANLTAKLHRCYVASLQIGSQGPRGFRREHLAAPAPAPVVVMEEQPPYAAGRN 180

Query: 181 VKRESECGELKVLEDDHIEQMIEELLYYGSMEFCF 215
           VKRESECGELKVLEDDHIEQMIEELLYYGSMEFCF
Sbjct: 181 VKRESECGELKVLEDDHIEQMIEELLYYGSMEFCF 215

[Close]

BLAST of MC11g0424 vs. ExPASy TrEMBL
Match: A0A1S3BUB9 (ethylene-responsive transcription factor ERF003-like OS=Cucumis melo OX=3656 GN=LOC103493770 PE=4 SV=1)

HSP 1 Score: 253 bits (647), Expect = 1.18e-82
Identity = 140/200 (70.00%), Postives = 159/200 (79.50%), Query Frame = 0


Query: 30  LFFSAAFSQTPCGGQ-KTSYAIAMARPQKRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTF 89
           +FFS AFSQTP G + +TSYA  MARPQKRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTF
Sbjct: 1   MFFSHAFSQTPSGEEIQTSYA--MARPQKRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTF 60

Query: 90  ETAEDAARAYDEAARLMCGPKARTNFAYNPNGVQCC--KLLSANLTAKLHRCYVASLQIG 149
           ETAEDAARAYDEAARLMCGPKARTNF Y+ + +Q    ++LS+NLTAKLHRCY+ASLQI 
Sbjct: 61  ETAEDAARAYDEAARLMCGPKARTNFPYSSSAIQSSNSRILSSNLTAKLHRCYMASLQIS 120

Query: 150 SQGP-RGFRREHLAA-PAPAP-------VVVMEEQPPYAAG---RNVKRESECGELKVLE 209
           +QG    F+R+  +A PAPA        ++   E+ P AA    R+VK ESE GELK+LE
Sbjct: 121 NQGSGEEFKRDITSAFPAPASTSSVVEDIIPAAEEGPCAADWMVRSVKMESEFGELKLLE 180

Query: 210 DDHIEQMIEELLYYGSMEFC 214
           DDHIEQMIEEL YYGSMEFC
Sbjct: 181 DDHIEQMIEELRYYGSMEFC 198

[Close]

BLAST of MC11g0424 vs. ExPASy TrEMBL
Match: A0A0A0L5N2 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G652640 PE=4 SV=1)

HSP 1 Score: 253 bits (646), Expect = 1.91e-82
Identity = 141/227 (62.11%), Postives = 162/227 (71.37%), Query Frame = 0


Query: 1   MAPRLPSLSATSKYKTPICFPSEKLRICALFFSAAFSQTPCGGQKTSYAIAMARPQKRYR 60
           MAPRLP LSA +KYK+PI                         ++   + AMARPQKRYR
Sbjct: 1   MAPRLPFLSAITKYKSPI-------------------------EEIQPSYAMARPQKRYR 60

Query: 61  GVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFAYNPNG 120
           GVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNF Y+P+ 
Sbjct: 61  GVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFPYSPSA 120

Query: 121 VQCC--KLLSANLTAKLHRCYVASLQIGSQGPRGFRREHLAA-PAPAP-------VVVME 180
           +Q    ++LS+NLTAKLHRCY+ASL+I +QG   F+ +  AA PAPA        ++   
Sbjct: 121 IQSSNSRILSSNLTAKLHRCYMASLEISNQGSAEFKSDITAAFPAPASTSSVVEEIIPAV 180

Query: 181 EQPPYAAG---RNVKRESECGELKVLEDDHIEQMIEELLYYGSMEFC 214
           E+ P AA    R+VK ESE GELK+LEDDHIEQMIEEL YYGSMEFC
Sbjct: 181 EEVPCAADWMVRSVKIESEFGELKLLEDDHIEQMIEELRYYGSMEFC 202

[Close]

BLAST of MC11g0424 vs. ExPASy TrEMBL
Match: A0A6J1IVF7 (ethylene-responsive transcription factor ERF003-like OS=Cucurbita maxima OX=3661 GN=LOC111480324 PE=4 SV=1)

HSP 1 Score: 220 bits (561), Expect = 4.19e-70
Identity = 120/170 (70.59%), Postives = 132/170 (77.65%), Query Frame = 0


Query: 52  MARPQKRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 111
           MARPQ++YRGVRQRHWGSWVSEIRHP LKTRIWLGTFETAEDAARAYDEAARLMCGP AR
Sbjct: 1   MARPQRQYRGVRQRHWGSWVSEIRHPSLKTRIWLGTFETAEDAARAYDEAARLMCGPNAR 60

Query: 112 TNFAYNPNGVQCC--KLLSANLTAKLHRCYVASLQIGSQGPRGFRRE-----HLAAPAPA 171
           TNF YNPN +Q    K+LSANLTAKLHRCY+ASLQI +Q    F+RE       A+ A A
Sbjct: 61  TNFPYNPNTIQSSNSKILSANLTAKLHRCYMASLQISNQE---FKRELPPPFATASYADA 120

Query: 172 PVVVMEEQPPYAAGRNVKRESECGELKVLEDDHIEQMIEELLYYGSMEFC 214
              ++EE  P AA       +E  E K+LEDDHIEQMIEELLYYGSMEFC
Sbjct: 121 ARSMVEENRPTAA-----EAAEQEEQKLLEDDHIEQMIEELLYYGSMEFC 162

[Close]

BLAST of MC11g0424 vs. ExPASy TrEMBL
Match: D5L105 (AP2 domain class transcription factor OS=Malus domestica OX=3750 GN=AP2D21 PE=2 SV=1)

HSP 1 Score: 213 bits (541), Expect = 7.73e-67
Identity = 115/171 (67.25%), Postives = 127/171 (74.27%), Query Frame = 0


Query: 52  MARPQKRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 111
           MARPQ+RYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGP+AR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 112 TNFAYNPNGVQ--CCKLLSANLTAKLHRCYVASLQIGSQGPRGFRREHLAAPAPA--PVV 171
           TNF YNPN  Q    KLLSA LTAKLHRCY+ASLQ+     +  ++    A + A  P +
Sbjct: 61  TNFPYNPNASQSSASKLLSATLTAKLHRCYMASLQMTKTSLQEPKKPQALASSGAKMPDI 120

Query: 172 VMEEQPPYAAG----RNVKRESECGELKVLEDDHIEQMIEELLYYGSMEFC 214
             E   P A      R VK ES   + K LEDDHIEQMIEELL+YGS+E C
Sbjct: 121 KPEIHQPVAEENWVVREVKVESSSQQFKPLEDDHIEQMIEELLHYGSIELC 171

[Close]

BLAST of MC11g0424 vs. TAIR 10
Match: AT5G25190.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 196.1 bits (497), Expect = 3.0e-50
Identity = 103/173 (59.54%), Postives = 121/173 (69.94%), Query Frame = 0


Query: 52  MARPQKRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 111
           MARPQ+R+RGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGP+AR
Sbjct: 1   MARPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 112 TNFAYNPNGV--QCCKLLSANLTAKLHRCYVASLQIGSQGPRGFRREHLAAPAPAPVVVM 171
           TNF YNPN +     KLLSA LTAKLH+CY+ASLQ+  Q     + +   + +     V 
Sbjct: 61  TNFPYNPNAIPTSSSKLLSATLTAKLHKCYMASLQMTKQTQTQTQTQTARSQSADSDGVT 120

Query: 172 EEQPPYAAGRNVKRESECGE--------LKVLEDDHIEQMIEELLYYGSMEFC 215
             +     G     E +  +         + LE+DHIEQMIEELL+YGS+E C
Sbjct: 121 ANESHLNRGVTETTEIKWEDGNANMQQNFRPLEEDHIEQMIEELLHYGSIELC 173

[Close]

BLAST of MC11g0424 vs. TAIR 10
Match: AT1G15360.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 109.4 bits (272), Expect = 3.7e-24
Identity = 50/63 (79.37%), Postives = 55/63 (87.30%), Query Frame = 0


Query: 57  KRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFAY 116
           K++RGVRQRHWGSWV+EIRHPLLK RIWLGTFETAE+AARAYDEAA LM G  A+TNF  
Sbjct: 5   KKFRGVRQRHWGSWVAEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKTNFPL 64

Query: 117 NPN 120
           N N
Sbjct: 65  NNN 67

[Close]

BLAST of MC11g0424 vs. TAIR 10
Match: AT5G25390.2 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 100.5 bits (249), Expect = 1.7e-21
Identity = 49/74 (66.22%), Postives = 57/74 (77.03%), Query Frame = 0


Query: 57  KRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNF-A 116
           K++RGVRQR WGSWVSEIRHPLLK R+WLGTF+TAE AARAYD+AA LM G  A+TNF  
Sbjct: 5   KKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAETAARAYDQAAVLMNGQSAKTNFPV 64

Query: 117 YNPNGVQCCKLLSA 130
              NG    ++ SA
Sbjct: 65  IKSNGSNSLEINSA 78

[Close]

BLAST of MC11g0424 vs. TAIR 10
Match: AT5G11190.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 100.1 bits (248), Expect = 2.2e-21
Identity = 45/58 (77.59%), Postives = 51/58 (87.93%), Query Frame = 0


Query: 57  KRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNF 115
           +++RGVRQR WGSWVSEIRHPLLK R+WLGTFETAE AARAYD+AA LM G  A+TNF
Sbjct: 5   RKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAALLMNGQNAKTNF 62

[Close]

BLAST of MC11g0424 vs. TAIR 10
Match: AT4G13620.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 93.2 bits (230), Expect = 2.7e-19
Identity = 60/159 (37.74%), Postives = 84/159 (52.83%), Query Frame = 0


Query: 45  KTSYAIAMARPQKRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARL 104
           KT   +    P K YRGVRQRHWG WV+EIR P  +TR+WLGTFETAE AA AYD AA +
Sbjct: 218 KTRKVVQTTTPTKLYRGVRQRHWGKWVAEIRLPRNRTRVWLGTFETAEQAAMAYDTAAYI 277

Query: 105 MCGPKARTNFAYNPNGVQCCKLLSANLTAKLHRCYVAS-LQIGSQGPRGFRREHLAAPAP 164
           + G  A  NF   P+       L   L +   RC +AS L+   Q     +  +  +P P
Sbjct: 278 LRGEFAHLNF---PD-------LKHQLKSGSLRCMIASLLESKIQQISSSQVSNSPSPPP 337

Query: 165 APVVVMEEQPPY---AAGRNVKRESECGELKVLEDDHIE 200
             V   E++  +    +G +V  + +    +V+E D ++
Sbjct: 338 PKVGTPEQKNHHMKMESGEDVMMKKQKSHKEVMEGDGVQ 366

The following BLAST results are available for this feature:

BLAST of MC11g0424 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94AW5	4.2e-49	59.54	Ethylene-responsive transcription factor ERF003 OS=Arabidopsis thaliana OX=3702 ...	[more]
P16146	8.0e-40	57.32	Protein PPLZ02 OS=Lupinus polyphyllus OX=3874 GN=PPLZ02 PE=2 SV=1	[more]
Q9XI33	5.2e-23	79.37	Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q3E958	2.4e-20	66.22	Ethylene-responsive transcription factor SHINE 3 OS=Arabidopsis thaliana OX=3702...	[more]
Q9LFN7	3.1e-20	77.59	Ethylene-responsive transcription factor SHINE 2 OS=Arabidopsis thaliana OX=3702...	[more]

BLAST of MC11g0424 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022140148.1	2.40e-157	100.00	ethylene-responsive transcription factor ERF003-like [Momordica charantia]	[more]
XP_011654234.1	2.64e-86	64.32	ethylene-responsive transcription factor ERF003 [Cucumis sativus] >KAE8649946.1 ...	[more]
XP_008452875.1	2.44e-82	70.00	PREDICTED: ethylene-responsive transcription factor ERF003-like [Cucumis melo]	[more]
XP_038899563.1	7.97e-82	64.86	ethylene-responsive transcription factor ERF003-like [Benincasa hispida]	[more]
KAG7031771.1	6.09e-70	70.59	Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp....	[more]

BLAST of MC11g0424 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CHC9	1.16e-157	100.00	ethylene-responsive transcription factor ERF003-like OS=Momordica charantia OX=3...	[more]
A0A1S3BUB9	1.18e-82	70.00	ethylene-responsive transcription factor ERF003-like OS=Cucumis melo OX=3656 GN=...	[more]
A0A0A0L5N2	1.91e-82	62.11	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G652640 PE=...	[more]
A0A6J1IVF7	4.19e-70	70.59	ethylene-responsive transcription factor ERF003-like OS=Cucurbita maxima OX=3661...	[more]
D5L105	7.73e-67	67.25	AP2 domain class transcription factor OS=Malus domestica OX=3750 GN=AP2D21 PE=2 ...	[more]

BLAST of MC11g0424 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G25190.1	3.0e-50	59.54	Integrase-type DNA-binding superfamily protein	[more]
AT1G15360.1	3.7e-24	79.37	Integrase-type DNA-binding superfamily protein	[more]
AT5G25390.2	1.7e-21	66.22	Integrase-type DNA-binding superfamily protein	[more]
AT5G11190.1	2.2e-21	77.59	Integrase-type DNA-binding superfamily protein	[more]
AT4G13620.1	2.7e-19	37.74	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 81..97 score: 70.91 coord: 59..70 score: 66.97
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 58..121 e-value: 7.0E-40 score: 148.5
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 58..107 e-value: 8.6E-12 score: 45.1
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 58..115 score: 20.70536
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 57..117 e-value: 6.50093E-34 score: 113.906
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 57..116 e-value: 9.6E-26 score: 91.7
None	No IPR available	PANTHER	PTHR31194	SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR	coord: 52..214
None	No IPR available	PANTHER	PTHR31194:SF61	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF003-LIKE ISOFORM X1	coord: 52..214
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 58..116

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC11g0424.1	MC11g0424.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity