MC11g0323 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC11g0323
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	BRISC and BRCA1-A complex member 1
Location	MC11: 2540617 .. 2543407 (-)
RNA-Seq Expression	MC11g0323
Synteny	MC11g0323

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5polypeptideCDSutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

CAGCCAAACTGAAAACTGTCGAATTCATAGAGAGAAAGAAAGTGGGTAGAGACCTATCATTTAATTTCTGTTTTATTGAAATAATTAACGAGACACGACACCGGACCGATTTCTTTGTTCCAATTTCCAAAAATCGACCCCGAAGAACAACAACAATGGAGGCAATCGAGGGGGACAGAGGAAGAAGCCGGTACTCACTCAAACCATCGAGGATAAGCAACGAGGACATTCTCTTCTGCATAGATGTCGACTCTGAATCTTCGATTGAGATCAAAACCACCGGCTCCAATGGCCGACCCATCACCAGAATGGACTCCATTAAGCAAGCAATCCTCCTCTTCGTCCACGCCAAACTCTCCATCAATCCTGAACACCGATTCGCATTCACCACCATCGCCAAATCTGCTATTTGGGTAATACCCCATCCCCATGACCTATTTTTTCCCCCCATTTTGTTTTGATTGTTCAGAAATGGAGATTTGGGGGACGGGATTTCTGGGGTTTGTCCCCCTTTCTTAGGTTTCGTGCAGTTTAATTTTTAGGGGTTACCCTTTCGATTTTAGCATGTCGCGCATCATTCTACTTATTTACCTAAATTGGTGAACTGAAATAGCAAGAGTCGACGTATAGATACAGAGAAACTTCTTGTGGTTCTACAGAAATTGGGGGTCGTTCTTCGGTTGGAAATTTGCAGTTTAAAATTCTTCTGCAGCTCAGGTTTTATTTAACATTGTGTTGGAGATTCTATCTGAGTTGTTTTTCCGACCCAGCTCGTAGTAAAAAGCTTTCCTCTTACTTATATTTCCTTTGTGTGATTCAGTAAATAATCCACCCTATAGCTGAATCAAAGCAAAATACCTTCTACTTTTCTGTTTGGGGATTTTGAGGTTTTGCGCAATGTGAATGTGATTCACCTCTTAGTTCCTCAATTCTTGTTGAAGCTGTGGCATGTGGGCAGATAATGAAAATTCCTGTTATTAGTCTATCTTCTTTTATCCAACAAGCACTCGATTATCAACTTTGAACTGTAGAATATAACTCTAACTTGCTGATCTAACATTTTCCCTTCCACTCTGTTAACTCTTGTTAAGAGGCATTGTTTTGATCTTGGCAATATAGTACAATCTATGCTGACCCTGAACAAAATATGTGTTGTACTACAGTAGTATCATAATAAGCTAGTGAAAAGGGTACAATACGGATGGTATTTTAAGGGAGAAAAAATGACAATTATCTCTATTTATCTGTTCTTGGAGTCTTTTTCTTTGGAAGGTGCTTCTCATGTAGTGGAACATGGAAACAGGCATGGAGATTCCTGTTGCATGTAGCTGATTTCTCCTTAGCCTCTCTTTCTTGCTCATTTAACTTTCGCTCGCTGTGATTAACTGCTAGTACTGGAGGCCCCTAAACCTAAGTTGCCTGTGCTGCGATGCAAGAAAGAGCGGGCTTTCACTTCACCTCTATACTTTTTATGATTTTTGCCCTTGACCATTTATCATTCATTTTCTCCTTTATAGTTATGAGTCTCTACTTGTTATTAAAAGAATCATGTTTATATTTGAGTAACAAGTAACAATTACAAATCTTACTATTATGGTATTTTTACTTATGGGTGGGTTGAGGATCTTTAACTGTGTCATACTGTTATAGTGTTATTCTTGCCCTCCATATGAAGACTAAGTTGCTAATCCCTCTGTACTGATGGAAAATTTATTCAAGATTCTGCTTTAAAAAGTCTAGTTCTTTTATAGCATTTATTTTTCTTCAATGAAACGTCAGCTTTTAATCCATGGTTTCATGATTGAAGCTCAAAAAAGAGTTCAGCAGTGATATTCCATCTACAGAGGCTGCAGTTAGGGGGCTTTCTGCTACTTCCTCCTGCAGTCATGCCGATCTTACCAGTCTTTTCCGGTTAGCTGCCCACGAAGCAAAAAAGTCGACCGCTCAAAATCGTATTCTAAGATTGGTATGCTCATTATACATATAGTCCCTATTTGTTAGCTTCAGCTCAAATAACTTGTCATTTGTTTGAGTCAATGAGTTAGCCTAGAGACAGCATATGTTCCAATGAATATTTGAAAGATTCTATGGATGCATCATAACGTTTTGTTGCATATAGATTCTTATCTACTGCAGATCATCGACACGACCCCAACATCAATGGCCCGTGAACCAAAAACTCTTCACCTTAGATGTTATTTACCTCCACGAGAAGCCCGGACCCGACAACTGCCCCCAGGAGGTGTATGATGCCTTAGTCGATGCCCTCGACCATGTCAGCCAATATGAAGGCTACATTTTCGAGAGTGGTCAGGGAGTAGCACGCGTTCTTTACCGTTGCATGTGTCTGTTGTTATCACACCCTCGACAACGAATTTCGCTAGATGATCTCGACATACCAAAGCCTCTTACAAAGAAATTACCACCCACCGATTCAGTTCCTACCAACGAAGTCGTCCCTGTTACCAGCCAGTGAAATGCCTAGGGGCTAGGTGATCTTGTAGCTTAATTGTACCTCGTGTTCGATATCTTTTTTGTAACAGATTTAAGTGATGTGCAATGTACATAGGAAATGTTTACGACGAGAGAGACGACCACGTCCGTGGAATGGTATCAAAATCATCTTTGTATGCTTAGATTGTTTGCTCATAATGTTCCTATATTTTGATGAACCACATTACATATTTGATAAAGCCTATTTTGGTATCAGAAAGTTGACTTAATGCTTGATATCAGAAGCTTGTTCCAATAATTGATAGGGAAATTTAGGAATTTGGATTGAATGGGTAAG

mRNA sequence

CAGCCAAACTGAAAACTGTCGAATTCATAGAGAGAAAGAAAGTGGGTAGAGACCTATCATTTAATTTCTGTTTTATTGAAATAATTAACGAGACACGACACCGGACCGATTTCTTTGTTCCAATTTCCAAAAATCGACCCCGAAGAACAACAACAATGGAGGCAATCGAGGGGGACAGAGGAAGAAGCCGGTACTCACTCAAACCATCGAGGATAAGCAACGAGGACATTCTCTTCTGCATAGATGTCGACTCTGAATCTTCGATTGAGATCAAAACCACCGGCTCCAATGGCCGACCCATCACCAGAATGGACTCCATTAAGCAAGCAATCCTCCTCTTCGTCCACGCCAAACTCTCCATCAATCCTGAACACCGATTCGCATTCACCACCATCGCCAAATCTGCTATTTGGCTCAAAAAAGAGTTCAGCAGTGATATTCCATCTACAGAGGCTGCAGTTAGGGGGCTTTCTGCTACTTCCTCCTGCAGTCATGCCGATCTTACCAGTCTTTTCCGGTTAGCTGCCCACGAAGCAAAAAAGTCGACCGCTCAAAATCGTATTCTAAGATTGATTCTTATCTACTGCAGATCATCGACACGACCCCAACATCAATGGCCCGTGAACCAAAAACTCTTCACCTTAGATGTTATTTACCTCCACGAGAAGCCCGGACCCGACAACTGCCCCCAGGAGGTGTATGATGCCTTAGTCGATGCCCTCGACCATGTCAGCCAATATGAAGGCTACATTTTCGAGAGTGGTCAGGGAGTAGCACGCGTTCTTTACCGTTGCATGTGTCTGTTGTTATCACACCCTCGACAACGAATTTCGCTAGATGATCTCGACATACCAAAGCCTCTTACAAAGAAATTACCACCCACCGATTCAGTTCCTACCAACGAAGTCGTCCCTGTTACCAGCCAGTGAAATGCCTAGGGGCTAGGTGATCTTGTAGCTTAATTGTACCTCGTGTTCGATATCTTTTTTGTAACAGATTTAAGTGATGTGCAATGTACATAGGAAATGTTTACGACGAGAGAGACGACCACGTCCGTGGAATGGTATCAAAATCATCTTTGTATGCTTAGATTGTTTGCTCATAATGTTCCTATATTTTGATGAACCACATTACATATTTGATAAAGCCTATTTTGGTATCAGAAAGTTGACTTAATGCTTGATATCAGAAGCTTGTTCCAATAATTGATAGGGAAATTTAGGAATTTGGATTGAATGGGTAAG

Coding sequence (CDS)

GCCAAACTGAAAACTGTCGAATTCATAGAGAGAAAGAAAGTGGGTAGAGACCTATCATTTAATTTCTGTTTTATTGAAATAATTAACGAGACACGACACCGGACCGATTTCTTTGTTCCAATTTCCAAAAATCGACCCCGAAGAACAACAACAATGGAGGCAATCGAGGGGGACAGAGGAAGAAGCCGGTACTCACTCAAACCATCGAGGATAAGCAACGAGGACATTCTCTTCTGCATAGATGTCGACTCTGAATCTTCGATTGAGATCAAAACCACCGGCTCCAATGGCCGACCCATCACCAGAATGGACTCCATTAAGCAAGCAATCCTCCTCTTCGTCCACGCCAAACTCTCCATCAATCCTGAACACCGATTCGCATTCACCACCATCGCCAAATCTGCTATTTGGCTCAAAAAAGAGTTCAGCAGTGATATTCCATCTACAGAGGCTGCAGTTAGGGGGCTTTCTGCTACTTCCTCCTGCAGTCATGCCGATCTTACCAGTCTTTTCCGGTTAGCTGCCCACGAAGCAAAAAAGTCGACCGCTCAAAATCGTATTCTAAGATTGATTCTTATCTACTGCAGATCATCGACACGACCCCAACATCAATGGCCCGTGAACCAAAAACTCTTCACCTTAGATGTTATTTACCTCCACGAGAAGCCCGGACCCGACAACTGCCCCCAGGAGGTGTATGATGCCTTAGTCGATGCCCTCGACCATGTCAGCCAATATGAAGGCTACATTTTCGAGAGTGGTCAGGGAGTAGCACGCGTTCTTTACCGTTGCATGTGTCTGTTGTTATCACACCCTCGACAACGAATTTCGCTAGATGATCTCGACATACCAAAGCCTCTTACAAAGAAATTACCACCCACCGATTCAGTTCCTACCAACGAAGTCGTCCCTGTTACCAGCCAGTGA

Protein sequence

AKLKTVEFIERKKVGRDLSFNFCFIEIINETRHRTDFFVPISKNRPRRTTTMEAIEGDRGRSRYSLKPSRISNEDILFCIDVDSESSIEIKTTGSNGRPITRMDSIKQAILLFVHAKLSINPEHRFAFTTIAKSAIWLKKEFSSDIPSTEAAVRGLSATSSCSHADLTSLFRLAAHEAKKSTAQNRILRLILIYCRSSTRPQHQWPVNQKLFTLDVIYLHEKPGPDNCPQEVYDALVDALDHVSQYEGYIFESGQGVARVLYRCMCLLLSHPRQRISLDDLDIPKPLTKKLPPTDSVPTNEVVPVTSQ

Homology

[Close]

BLAST of MC11g0323 vs. NCBI nr
Match: XP_022142347.1 (uncharacterized protein LOC111012487 [Momordica charantia])

HSP 1 Score: 511 bits (1315), Expect = 1.40e-181
Identity = 257/257 (100.00%), Postives = 257/257 (100.00%), Query Frame = 0


Query: 52  MEAIEGDRGRSRYSLKPSRISNEDILFCIDVDSESSIEIKTTGSNGRPITRMDSIKQAIL 111
           MEAIEGDRGRSRYSLKPSRISNEDILFCIDVDSESSIEIKTTGSNGRPITRMDSIKQAIL
Sbjct: 1   MEAIEGDRGRSRYSLKPSRISNEDILFCIDVDSESSIEIKTTGSNGRPITRMDSIKQAIL 60

Query: 112 LFVHAKLSINPEHRFAFTTIAKSAIWLKKEFSSDIPSTEAAVRGLSATSSCSHADLTSLF 171
           LFVHAKLSINPEHRFAFTTIAKSAIWLKKEFSSDIPSTEAAVRGLSATSSCSHADLTSLF
Sbjct: 61  LFVHAKLSINPEHRFAFTTIAKSAIWLKKEFSSDIPSTEAAVRGLSATSSCSHADLTSLF 120

Query: 172 RLAAHEAKKSTAQNRILRLILIYCRSSTRPQHQWPVNQKLFTLDVIYLHEKPGPDNCPQE 231
           RLAAHEAKKSTAQNRILRLILIYCRSSTRPQHQWPVNQKLFTLDVIYLHEKPGPDNCPQE
Sbjct: 121 RLAAHEAKKSTAQNRILRLILIYCRSSTRPQHQWPVNQKLFTLDVIYLHEKPGPDNCPQE 180

Query: 232 VYDALVDALDHVSQYEGYIFESGQGVARVLYRCMCLLLSHPRQRISLDDLDIPKPLTKKL 291
           VYDALVDALDHVSQYEGYIFESGQGVARVLYRCMCLLLSHPRQRISLDDLDIPKPLTKKL
Sbjct: 181 VYDALVDALDHVSQYEGYIFESGQGVARVLYRCMCLLLSHPRQRISLDDLDIPKPLTKKL 240

Query: 292 PPTDSVPTNEVVPVTSQ 308
           PPTDSVPTNEVVPVTSQ
Sbjct: 241 PPTDSVPTNEVVPVTSQ 257

[Close]

BLAST of MC11g0323 vs. NCBI nr
Match: XP_008452703.1 (PREDICTED: BRISC and BRCA1-A complex member 1 [Cucumis melo])

HSP 1 Score: 469 bits (1208), Expect = 2.81e-165
Identity = 233/257 (90.66%), Postives = 244/257 (94.94%), Query Frame = 0


Query: 52  MEAIEGDRGRSRYSLKPSRISNEDILFCIDVDSESSIEIKTTGSNGRPITRMDSIKQAIL 111
           MEAIE +RG S YSLKPSR++NEDILFCIDV+ ESS+EIKTTGSNGRPITRMDSIKQAIL
Sbjct: 1   MEAIEVERGGSGYSLKPSRLNNEDILFCIDVNPESSVEIKTTGSNGRPITRMDSIKQAIL 60

Query: 112 LFVHAKLSINPEHRFAFTTIAKSAIWLKKEFSSDIPSTEAAVRGLSATSSCSHADLTSLF 171
           LFVHAKLS+NP+HRFAFTTIAKSAIWLKKEFSSDI S EAAVRGL ATS C+HADLTSLF
Sbjct: 61  LFVHAKLSMNPDHRFAFTTIAKSAIWLKKEFSSDIASAEAAVRGLGATSPCNHADLTSLF 120

Query: 172 RLAAHEAKKSTAQNRILRLILIYCRSSTRPQHQWPVNQKLFTLDVIYLHEKPGPDNCPQE 231
           RLAAHE++KSTAQNRILRLILIYCRSSTRPQHQWP NQKLFT DVIYLHEKPGPDNCPQE
Sbjct: 121 RLAAHESRKSTAQNRILRLILIYCRSSTRPQHQWPANQKLFTFDVIYLHEKPGPDNCPQE 180

Query: 232 VYDALVDALDHVSQYEGYIFESGQGVARVLYRCMCLLLSHPRQRISLDDLDIPKPLTKKL 291
           VYDALVDALDHVSQYEGYIFESGQGVARVLYRCMCLLLSHP+QRISLDDLDIPKPLTKKL
Sbjct: 181 VYDALVDALDHVSQYEGYIFESGQGVARVLYRCMCLLLSHPQQRISLDDLDIPKPLTKKL 240

Query: 292 PPTDSVPTNEVVPVTSQ 308
           PP DS P NEVVPVTSQ
Sbjct: 241 PPADSTPPNEVVPVTSQ 257

[Close]

BLAST of MC11g0323 vs. NCBI nr
Match: XP_004141308.1 (BRISC and BRCA1-A complex member 1 [Cucumis sativus] >KGN55320.1 hypothetical protein Csa_012747 [Cucumis sativus])

HSP 1 Score: 464 bits (1193), Expect = 5.42e-163
Identity = 230/257 (89.49%), Postives = 243/257 (94.55%), Query Frame = 0


Query: 52  MEAIEGDRGRSRYSLKPSRISNEDILFCIDVDSESSIEIKTTGSNGRPITRMDSIKQAIL 111
           MEAIE +RG S YSLK SR++NEDILFCIDV+ ESS+EIKTTGSNGRPITRMDSIKQAIL
Sbjct: 1   MEAIEVERGGSGYSLKSSRLNNEDILFCIDVNPESSVEIKTTGSNGRPITRMDSIKQAIL 60

Query: 112 LFVHAKLSINPEHRFAFTTIAKSAIWLKKEFSSDIPSTEAAVRGLSATSSCSHADLTSLF 171
           LFVHAKLS+NP+HRFAFTTIAKSAIWLKKEFSSDI S EAAVRGL ATS C+HADLTSLF
Sbjct: 61  LFVHAKLSMNPDHRFAFTTIAKSAIWLKKEFSSDIASAEAAVRGLGATSPCNHADLTSLF 120

Query: 172 RLAAHEAKKSTAQNRILRLILIYCRSSTRPQHQWPVNQKLFTLDVIYLHEKPGPDNCPQE 231
           RLAAHE++KSTAQNRILRLILIYCRSST+PQHQWP NQKLFT DVIYLHEKPGPDNCPQE
Sbjct: 121 RLAAHESRKSTAQNRILRLILIYCRSSTQPQHQWPANQKLFTFDVIYLHEKPGPDNCPQE 180

Query: 232 VYDALVDALDHVSQYEGYIFESGQGVARVLYRCMCLLLSHPRQRISLDDLDIPKPLTKKL 291
           VYDALVDALDHVSQYEGYIFESGQGVARVLYRCMCLLLSHP+QRISLDDLDIPKPLTKKL
Sbjct: 181 VYDALVDALDHVSQYEGYIFESGQGVARVLYRCMCLLLSHPQQRISLDDLDIPKPLTKKL 240

Query: 292 PPTDSVPTNEVVPVTSQ 308
           PP D+ P NEVVPVTSQ
Sbjct: 241 PPADTAPPNEVVPVTSQ 257

[Close]

BLAST of MC11g0323 vs. NCBI nr
Match: XP_023524345.1 (uncharacterized protein LOC111788267 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 463 bits (1192), Expect = 7.70e-163
Identity = 230/257 (89.49%), Postives = 244/257 (94.94%), Query Frame = 0


Query: 52  MEAIEGDRGRSRYSLKPSRISNEDILFCIDVDSESSIEIKTTGSNGRPITRMDSIKQAIL 111
           ME IEG+RG SRYSLKPSRI+NEDILFCIDV+ ESS+EIKTTGSNGRPITRMDSIKQAIL
Sbjct: 1   MEGIEGERGGSRYSLKPSRINNEDILFCIDVNPESSVEIKTTGSNGRPITRMDSIKQAIL 60

Query: 112 LFVHAKLSINPEHRFAFTTIAKSAIWLKKEFSSDIPSTEAAVRGLSATSSCSHADLTSLF 171
           LFVHAKLS+NP+HRFAFTTIAKSA WLKK+FSSDI S EAA+RGL  TSSCSHADLTSLF
Sbjct: 61  LFVHAKLSMNPDHRFAFTTIAKSATWLKKDFSSDIASVEAAIRGLVPTSSCSHADLTSLF 120

Query: 172 RLAAHEAKKSTAQNRILRLILIYCRSSTRPQHQWPVNQKLFTLDVIYLHEKPGPDNCPQE 231
           RLAAHEA+KSTAQN ILR+ILIYCRSSTRPQHQWPVNQKLFTLDVIYLHEKPGPDNCPQE
Sbjct: 121 RLAAHEARKSTAQNHILRVILIYCRSSTRPQHQWPVNQKLFTLDVIYLHEKPGPDNCPQE 180

Query: 232 VYDALVDALDHVSQYEGYIFESGQGVARVLYRCMCLLLSHPRQRISLDDLDIPKPLTKKL 291
           VYDALVDALD VSQYEGYIFESGQGVARVLYRCMCLLLSHP+QRISLDDL+IPK LTKK+
Sbjct: 181 VYDALVDALDLVSQYEGYIFESGQGVARVLYRCMCLLLSHPQQRISLDDLNIPKLLTKKV 240

Query: 292 PPTDSVPTNEVVPVTSQ 308
           PP DS+P NEVVPVTSQ
Sbjct: 241 PPADSIPANEVVPVTSQ 257

[Close]

BLAST of MC11g0323 vs. NCBI nr
Match: XP_038897935.1 (BRISC and BRCA1-A complex member 1 [Benincasa hispida])

HSP 1 Score: 463 bits (1192), Expect = 7.70e-163
Identity = 227/257 (88.33%), Postives = 245/257 (95.33%), Query Frame = 0


Query: 52  MEAIEGDRGRSRYSLKPSRISNEDILFCIDVDSESSIEIKTTGSNGRPITRMDSIKQAIL 111
           MEAIE +RG S YSLKPSR+++EDILFCIDV+ ESS+EIKTTGSNGRPITRMDSIKQAIL
Sbjct: 1   MEAIEVERGGSGYSLKPSRLNSEDILFCIDVNPESSVEIKTTGSNGRPITRMDSIKQAIL 60

Query: 112 LFVHAKLSINPEHRFAFTTIAKSAIWLKKEFSSDIPSTEAAVRGLSATSSCSHADLTSLF 171
           LFVHAKLS+NP+HRFAFTT+AKSAIWLKKEFSSDI + EAAVRGL AT+ CSHADLTSLF
Sbjct: 61  LFVHAKLSMNPDHRFAFTTVAKSAIWLKKEFSSDIAAAEAAVRGLGATTPCSHADLTSLF 120

Query: 172 RLAAHEAKKSTAQNRILRLILIYCRSSTRPQHQWPVNQKLFTLDVIYLHEKPGPDNCPQE 231
           R+AAHEA+KSTAQNRILR+ILIYCRSSTRPQHQWPVNQK+FT DVIYLHEKPGPDNCPQE
Sbjct: 121 RVAAHEARKSTAQNRILRVILIYCRSSTRPQHQWPVNQKVFTFDVIYLHEKPGPDNCPQE 180

Query: 232 VYDALVDALDHVSQYEGYIFESGQGVARVLYRCMCLLLSHPRQRISLDDLDIPKPLTKKL 291
           VYDALVDALDHVSQYEGYIFESGQG+AR+LYRCMCLLLSHP+QRISLDDLDIPKPLTKKL
Sbjct: 181 VYDALVDALDHVSQYEGYIFESGQGIARILYRCMCLLLSHPQQRISLDDLDIPKPLTKKL 240

Query: 292 PPTDSVPTNEVVPVTSQ 308
           PP DSVP  EVVPVTSQ
Sbjct: 241 PPADSVPAAEVVPVTSQ 257

[Close]

BLAST of MC11g0323 vs. ExPASy TrEMBL
Match: A0A6J1CMH8 (BRISC and BRCA1-A complex member 1 OS=Momordica charantia OX=3673 GN=LOC111012487 PE=3 SV=1)

HSP 1 Score: 511 bits (1315), Expect = 6.79e-182
Identity = 257/257 (100.00%), Postives = 257/257 (100.00%), Query Frame = 0


Query: 52  MEAIEGDRGRSRYSLKPSRISNEDILFCIDVDSESSIEIKTTGSNGRPITRMDSIKQAIL 111
           MEAIEGDRGRSRYSLKPSRISNEDILFCIDVDSESSIEIKTTGSNGRPITRMDSIKQAIL
Sbjct: 1   MEAIEGDRGRSRYSLKPSRISNEDILFCIDVDSESSIEIKTTGSNGRPITRMDSIKQAIL 60

Query: 112 LFVHAKLSINPEHRFAFTTIAKSAIWLKKEFSSDIPSTEAAVRGLSATSSCSHADLTSLF 171
           LFVHAKLSINPEHRFAFTTIAKSAIWLKKEFSSDIPSTEAAVRGLSATSSCSHADLTSLF
Sbjct: 61  LFVHAKLSINPEHRFAFTTIAKSAIWLKKEFSSDIPSTEAAVRGLSATSSCSHADLTSLF 120

Query: 172 RLAAHEAKKSTAQNRILRLILIYCRSSTRPQHQWPVNQKLFTLDVIYLHEKPGPDNCPQE 231
           RLAAHEAKKSTAQNRILRLILIYCRSSTRPQHQWPVNQKLFTLDVIYLHEKPGPDNCPQE
Sbjct: 121 RLAAHEAKKSTAQNRILRLILIYCRSSTRPQHQWPVNQKLFTLDVIYLHEKPGPDNCPQE 180

Query: 232 VYDALVDALDHVSQYEGYIFESGQGVARVLYRCMCLLLSHPRQRISLDDLDIPKPLTKKL 291
           VYDALVDALDHVSQYEGYIFESGQGVARVLYRCMCLLLSHPRQRISLDDLDIPKPLTKKL
Sbjct: 181 VYDALVDALDHVSQYEGYIFESGQGVARVLYRCMCLLLSHPRQRISLDDLDIPKPLTKKL 240

Query: 292 PPTDSVPTNEVVPVTSQ 308
           PPTDSVPTNEVVPVTSQ
Sbjct: 241 PPTDSVPTNEVVPVTSQ 257

[Close]

BLAST of MC11g0323 vs. ExPASy TrEMBL
Match: A0A1S3BUH3 (BRISC and BRCA1-A complex member 1 OS=Cucumis melo OX=3656 GN=LOC103493644 PE=3 SV=1)

HSP 1 Score: 469 bits (1208), Expect = 1.36e-165
Identity = 233/257 (90.66%), Postives = 244/257 (94.94%), Query Frame = 0


Query: 52  MEAIEGDRGRSRYSLKPSRISNEDILFCIDVDSESSIEIKTTGSNGRPITRMDSIKQAIL 111
           MEAIE +RG S YSLKPSR++NEDILFCIDV+ ESS+EIKTTGSNGRPITRMDSIKQAIL
Sbjct: 1   MEAIEVERGGSGYSLKPSRLNNEDILFCIDVNPESSVEIKTTGSNGRPITRMDSIKQAIL 60

Query: 112 LFVHAKLSINPEHRFAFTTIAKSAIWLKKEFSSDIPSTEAAVRGLSATSSCSHADLTSLF 171
           LFVHAKLS+NP+HRFAFTTIAKSAIWLKKEFSSDI S EAAVRGL ATS C+HADLTSLF
Sbjct: 61  LFVHAKLSMNPDHRFAFTTIAKSAIWLKKEFSSDIASAEAAVRGLGATSPCNHADLTSLF 120

Query: 172 RLAAHEAKKSTAQNRILRLILIYCRSSTRPQHQWPVNQKLFTLDVIYLHEKPGPDNCPQE 231
           RLAAHE++KSTAQNRILRLILIYCRSSTRPQHQWP NQKLFT DVIYLHEKPGPDNCPQE
Sbjct: 121 RLAAHESRKSTAQNRILRLILIYCRSSTRPQHQWPANQKLFTFDVIYLHEKPGPDNCPQE 180

Query: 232 VYDALVDALDHVSQYEGYIFESGQGVARVLYRCMCLLLSHPRQRISLDDLDIPKPLTKKL 291
           VYDALVDALDHVSQYEGYIFESGQGVARVLYRCMCLLLSHP+QRISLDDLDIPKPLTKKL
Sbjct: 181 VYDALVDALDHVSQYEGYIFESGQGVARVLYRCMCLLLSHPQQRISLDDLDIPKPLTKKL 240

Query: 292 PPTDSVPTNEVVPVTSQ 308
           PP DS P NEVVPVTSQ
Sbjct: 241 PPADSTPPNEVVPVTSQ 257

[Close]

BLAST of MC11g0323 vs. ExPASy TrEMBL
Match: A0A0A0L024 (BRISC and BRCA1-A complex member 1 OS=Cucumis sativus OX=3659 GN=Csa_4G645930 PE=3 SV=1)

HSP 1 Score: 464 bits (1193), Expect = 2.62e-163
Identity = 230/257 (89.49%), Postives = 243/257 (94.55%), Query Frame = 0


Query: 52  MEAIEGDRGRSRYSLKPSRISNEDILFCIDVDSESSIEIKTTGSNGRPITRMDSIKQAIL 111
           MEAIE +RG S YSLK SR++NEDILFCIDV+ ESS+EIKTTGSNGRPITRMDSIKQAIL
Sbjct: 1   MEAIEVERGGSGYSLKSSRLNNEDILFCIDVNPESSVEIKTTGSNGRPITRMDSIKQAIL 60

Query: 112 LFVHAKLSINPEHRFAFTTIAKSAIWLKKEFSSDIPSTEAAVRGLSATSSCSHADLTSLF 171
           LFVHAKLS+NP+HRFAFTTIAKSAIWLKKEFSSDI S EAAVRGL ATS C+HADLTSLF
Sbjct: 61  LFVHAKLSMNPDHRFAFTTIAKSAIWLKKEFSSDIASAEAAVRGLGATSPCNHADLTSLF 120

Query: 172 RLAAHEAKKSTAQNRILRLILIYCRSSTRPQHQWPVNQKLFTLDVIYLHEKPGPDNCPQE 231
           RLAAHE++KSTAQNRILRLILIYCRSST+PQHQWP NQKLFT DVIYLHEKPGPDNCPQE
Sbjct: 121 RLAAHESRKSTAQNRILRLILIYCRSSTQPQHQWPANQKLFTFDVIYLHEKPGPDNCPQE 180

Query: 232 VYDALVDALDHVSQYEGYIFESGQGVARVLYRCMCLLLSHPRQRISLDDLDIPKPLTKKL 291
           VYDALVDALDHVSQYEGYIFESGQGVARVLYRCMCLLLSHP+QRISLDDLDIPKPLTKKL
Sbjct: 181 VYDALVDALDHVSQYEGYIFESGQGVARVLYRCMCLLLSHPQQRISLDDLDIPKPLTKKL 240

Query: 292 PPTDSVPTNEVVPVTSQ 308
           PP D+ P NEVVPVTSQ
Sbjct: 241 PPADTAPPNEVVPVTSQ 257

[Close]

BLAST of MC11g0323 vs. ExPASy TrEMBL
Match: A0A6J1FN80 (BRISC and BRCA1-A complex member 1 OS=Cucurbita moschata OX=3662 GN=LOC111446703 PE=3 SV=1)

HSP 1 Score: 462 bits (1189), Expect = 1.07e-162
Identity = 229/257 (89.11%), Postives = 244/257 (94.94%), Query Frame = 0


Query: 52  MEAIEGDRGRSRYSLKPSRISNEDILFCIDVDSESSIEIKTTGSNGRPITRMDSIKQAIL 111
           ME +EG+RG SRYSLKPSRI+NEDILFCIDV+ ESS+EIKTTGSNGRPITRMDSIKQAIL
Sbjct: 1   MEGMEGERGGSRYSLKPSRINNEDILFCIDVNPESSVEIKTTGSNGRPITRMDSIKQAIL 60

Query: 112 LFVHAKLSINPEHRFAFTTIAKSAIWLKKEFSSDIPSTEAAVRGLSATSSCSHADLTSLF 171
           LFVHAKLS+NP+HRFAFTTIAKSA WLKK+FSSDI S EAA+RGL  TSSCSHADLTSLF
Sbjct: 61  LFVHAKLSMNPDHRFAFTTIAKSATWLKKDFSSDIASVEAAIRGLVPTSSCSHADLTSLF 120

Query: 172 RLAAHEAKKSTAQNRILRLILIYCRSSTRPQHQWPVNQKLFTLDVIYLHEKPGPDNCPQE 231
           RLAAHEA+KSTAQN ILR+ILIYCRSSTRPQHQWPVNQKLFTLDVIYLHEKPGPDNCPQE
Sbjct: 121 RLAAHEARKSTAQNHILRVILIYCRSSTRPQHQWPVNQKLFTLDVIYLHEKPGPDNCPQE 180

Query: 232 VYDALVDALDHVSQYEGYIFESGQGVARVLYRCMCLLLSHPRQRISLDDLDIPKPLTKKL 291
           VYDALVDALD VSQYEGYIFESGQGVARVLYRCMCLLLSHP+QRISLDDL+IPK LTKK+
Sbjct: 181 VYDALVDALDLVSQYEGYIFESGQGVARVLYRCMCLLLSHPQQRISLDDLNIPKLLTKKV 240

Query: 292 PPTDSVPTNEVVPVTSQ 308
           PP DS+P NEVVPVTSQ
Sbjct: 241 PPADSIPANEVVPVTSQ 257

[Close]

BLAST of MC11g0323 vs. ExPASy TrEMBL
Match: A0A6J1J2J5 (BRISC and BRCA1-A complex member 1 OS=Cucurbita maxima OX=3661 GN=LOC111481237 PE=3 SV=1)

HSP 1 Score: 461 bits (1185), Expect = 4.34e-162
Identity = 228/257 (88.72%), Postives = 244/257 (94.94%), Query Frame = 0


Query: 52  MEAIEGDRGRSRYSLKPSRISNEDILFCIDVDSESSIEIKTTGSNGRPITRMDSIKQAIL 111
           ME IEG+RG SRYSL+PSRI+NEDILFCIDV+ ESS+EIKTTGSNGRPITRMDSIKQAIL
Sbjct: 1   MEGIEGERGGSRYSLQPSRINNEDILFCIDVNPESSVEIKTTGSNGRPITRMDSIKQAIL 60

Query: 112 LFVHAKLSINPEHRFAFTTIAKSAIWLKKEFSSDIPSTEAAVRGLSATSSCSHADLTSLF 171
           LFVHAKLS+NP+HRFAFTTIAKSA WLK++FSSDI S EAA+RGL  TSSCSHADLTSLF
Sbjct: 61  LFVHAKLSMNPDHRFAFTTIAKSATWLKRDFSSDIASVEAAIRGLVPTSSCSHADLTSLF 120

Query: 172 RLAAHEAKKSTAQNRILRLILIYCRSSTRPQHQWPVNQKLFTLDVIYLHEKPGPDNCPQE 231
           RLAAHEA+KSTAQN ILR+ILIYCRSSTRPQHQWPVNQKLFTLDVIYLHEKPGPDNCPQE
Sbjct: 121 RLAAHEARKSTAQNHILRVILIYCRSSTRPQHQWPVNQKLFTLDVIYLHEKPGPDNCPQE 180

Query: 232 VYDALVDALDHVSQYEGYIFESGQGVARVLYRCMCLLLSHPRQRISLDDLDIPKPLTKKL 291
           VYDALVDALD VSQYEGYIFESGQGVARVLYRCMCLLLSHP+QRISLDDL+IPK LTKK+
Sbjct: 181 VYDALVDALDLVSQYEGYIFESGQGVARVLYRCMCLLLSHPQQRISLDDLNIPKLLTKKV 240

Query: 292 PPTDSVPTNEVVPVTSQ 308
           PP DS+P NEVVPVTSQ
Sbjct: 241 PPADSIPANEVVPVTSQ 257

[Close]

BLAST of MC11g0323 vs. TAIR 10
Match: AT4G32960.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32970.1); Has 106 Blast hits to 106 proteins in 39 species: Archae - 0; Bacteria - 0; Metazoa - 62; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). )

HSP 1 Score: 344.7 bits (883), Expect = 7.5e-95
Identity = 162/237 (68.35%), Postives = 200/237 (84.39%), Query Frame = 0


Query: 60  GRSRYSLKPSRISNEDILFCIDVDSESSIEIKTTGSNGRPITRMDSIKQAILLFVHAKLS 119
           G +RY+LKP RI +EDIL CIDVD+ES +E+KTTG+NGRP+ RM+ +KQAI+LF+H KLS
Sbjct: 12  GTTRYALKPGRIKSEDILICIDVDAESMVEMKTTGTNGRPLIRMECVKQAIILFIHNKLS 71

Query: 120 INPEHRFAFTTIAKSAIWLKKEFSSDIPSTEAAVRGLSATSSCSHADLTSLFRLAAHEAK 179
           INP+HRFAF T+AKSA WLKKEF+SD  S  A++RGLS   S S ADLT LFR AA EAK
Sbjct: 72  INPDHRFAFATLAKSAAWLKKEFTSDAESAVASLRGLSGNKSSSRADLTLLFRAAAQEAK 131

Query: 180 KSTAQNRILRLILIYCRSSTRPQHQWPVNQKLFTLDVIYLHEKPGPDNCPQEVYDALVDA 239
            S AQNRI R+ILIYCRSS RP H+WP+NQKLFTLDV+YLH+KP PDNCPQ+VYD+LVDA
Sbjct: 132 VSRAQNRIFRVILIYCRSSMRPTHEWPLNQKLFTLDVMYLHDKPSPDNCPQDVYDSLVDA 191

Query: 240 LDHVSQYEGYIFESGQGVARVLYRCMCLLLSHPRQRISLDDLDIPKPLTKKLPPTDS 297
           ++HVS+YEGYIFESGQG+AR +++ M +LL+HP+QR + DDLDIP  L KK+P T++
Sbjct: 192 VEHVSEYEGYIFESGQGLARSVFKPMSMLLTHPQQRCAQDDLDIPMSLAKKVPVTEA 248

[Close]

BLAST of MC11g0323 vs. TAIR 10
Match: AT4G32970.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32960.1); Has 552 Blast hits to 489 proteins in 85 species: Archae - 4; Bacteria - 14; Metazoa - 187; Fungi - 12; Plants - 225; Viruses - 0; Other Eukaryotes - 110 (source: NCBI BLink). )

HSP 1 Score: 279.6 bits (714), Expect = 2.9e-75
Identity = 136/229 (59.39%), Postives = 178/229 (77.73%), Query Frame = 0


Query: 62  SRYSLKPSRISNEDILFCIDVDSESSIEIKTTGSNGRPITRMDSIKQAILLFVHAKLSIN 121
           +R S++PS    EDIL C+DVD+ES++E+KTTG+NG+P+ R++ +K AI  F+H KLS N
Sbjct: 14  TRDSVEPS----EDILICVDVDAESTVEMKTTGTNGKPLNRLECLKLAITRFIHDKLSRN 73

Query: 122 PEHRFAFTTIAKSAIWLKKEFSSDIPSTEAAVRGLSATSSCSHADLTSLFRLAAHEAKKS 181
            +HRFAF T+++SA WLKKEFS+D  S  A++R +SAT S   ADLT LF+ AA EAK S
Sbjct: 74  SDHRFAFATLSQSAAWLKKEFSNDAKSAAASLREMSATRSSGPADLTFLFQEAAQEAKTS 133

Query: 182 TAQNRILRLILIYCRSSTRPQHQWPVNQKLFTLDVIYLHEKPGPDNCPQEVYDALVDALD 241
            AQNRILR+IL+YCRSS RP H WP+NQKLFTLDV+YLH+K GPDNC  +VYD+LVDA++
Sbjct: 134 RAQNRILRVILMYCRSSVRPTHDWPINQKLFTLDVMYLHDKSGPDNCTHDVYDSLVDAIE 193

Query: 242 HVSQYEGYIFESGQGVARVLYRCMCLLLSHPRQRISLDDLDIPKPLTKK 291
            VS+YEGYIFE   G+++ ++R M  LLSHP QR +   +D+PKP  KK
Sbjct: 194 RVSEYEGYIFEGSHGLSQSVFRRMSTLLSHPPQRCA--QVDLPKPPAKK 236

The following BLAST results are available for this feature:

BLAST of MC11g0323 vs.


Match Name	E-value	Identity	Description

BLAST of MC11g0323 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022142347.1	1.40e-181	100.00	uncharacterized protein LOC111012487 [Momordica charantia]	[more]
XP_008452703.1	2.81e-165	90.66	PREDICTED: BRISC and BRCA1-A complex member 1 [Cucumis melo]	[more]
XP_004141308.1	5.42e-163	89.49	BRISC and BRCA1-A complex member 1 [Cucumis sativus] >KGN55320.1 hypothetical pr...	[more]
XP_023524345.1	7.70e-163	89.49	uncharacterized protein LOC111788267 [Cucurbita pepo subsp. pepo]	[more]
XP_038897935.1	7.70e-163	88.33	BRISC and BRCA1-A complex member 1 [Benincasa hispida]	[more]

BLAST of MC11g0323 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CMH8	6.79e-182	100.00	BRISC and BRCA1-A complex member 1 OS=Momordica charantia OX=3673 GN=LOC11101248...	[more]
A0A1S3BUH3	1.36e-165	90.66	BRISC and BRCA1-A complex member 1 OS=Cucumis melo OX=3656 GN=LOC103493644 PE=3 ...	[more]
A0A0A0L024	2.62e-163	89.49	BRISC and BRCA1-A complex member 1 OS=Cucumis sativus OX=3659 GN=Csa_4G645930 PE...	[more]
A0A6J1FN80	1.07e-162	89.11	BRISC and BRCA1-A complex member 1 OS=Cucurbita moschata OX=3662 GN=LOC111446703...	[more]
A0A6J1J2J5	4.34e-162	88.72	BRISC and BRCA1-A complex member 1 OS=Cucurbita maxima OX=3661 GN=LOC111481237 P...	[more]

BLAST of MC11g0323 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G32960.1	7.5e-95	68.35	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G32970.1	2.9e-75	59.39	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036465	von Willebrand factor A-like domain superfamily	GENE3D	3.40.50.410	von Willebrand factor, type A domain	coord: 74..214 e-value: 3.0E-5 score: 25.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 287..308
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 293..308
None	No IPR available	CDD	cd00198	vWFA	coord: 75..193 e-value: 8.2129E-4 score: 37.5454
IPR026126	BRISC and BRCA1-A complex member 1	PANTHER	PTHR15660	UNCHARACTERIZED	coord: 52..305

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC11g0323.1	MC11g0323.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045739	positive regulation of DNA repair
cellular_component	GO:0070531	BRCA1-A complex
cellular_component	GO:0070552	BRISC complex