MC10g_new0236 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC10g_new0236
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC10: 10941520 .. 10945717 (-)
RNA-Seq ExpressionMC10g_new0236
SyntenyMC10g_new0236
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTTCAGATGGTGACTCTAATGGAGAACCAGGGGTTTGCATAGAATCTCGAGGAGTGGTCTTAGACAAGCTGATAGCTGCGAATACAGGTAATCCCCTACCAATTTCGTGGACGGTAGAAGCAGGCAAACCTGTTGGGTATTTGGCCAGTCTATTCAACAGTGAAATTGGTCGTTTGACACGTTGGAATGTTCCGTTAGAAATACAGAAGAAAAATGACATCCCAGAAAATGTTTATAATGACATTATTCAACATTTGTTGGTAAGATAGTTATAATAACATTATTCTATTTATCGTATATTCGTTTAACATGAATGTGATATTTCCTTAATTTTATTTGTTTACATGTGTAGAATAAATTTGAGGTCGACGTCACTATTTCTCATCATGTGGAATATATCAAGTATGAGATAGGGACGCGCTACAAAGACTATCTATGCCTTTTACATAAATACTATCGTGGATTTGAAGATCCAACAATGGCTCGACGACGCCCATATGGAAGAATTCAACAGGATGATTGGAACATGCTATGTAATAAATGGGAGACTATTGCATGGAAGGTAACTAATAATTGAATATTATTATTATTCGTGTATAGAATTAATGATATATATCTTGTTTCTGTAGGCAAAATCAGCGAAAAATAAAGCAAGTAGAAGTAAACTCCCATTTAATCATCGGGCTGGACCGAAATCATTTCTCTCGCATCGAGAAGATACGGTATGAAATTGTGATTTGTAGTAGTGTGTTATATGTTTTATCTCTCATTATTGTTATAATATGATGCTATAGAAAAAAGAAGATGGGACATATTTGAGTCCCTTTGAGCTTTTTTACGAGATACATTGTCATCCGACAAAGGCTTGGACCAATGAAACTGCTCAAAATGCATATGTAAGTACTAATCTGATGATATAAATTTAGTACTAATATCTGCTCAACACAAGACTTACTTGATATACAACGACAGGAATATGAGAGAAGATGTAGCCAGATGGAAGAAATTCTCAATAGCTTTAGAGGAGGAGGAGGAAGTGGAAAAGGAGGAAGTTCATCGTTGAGCAAGGTACGAACAATTTGAATTTCTTTGTGTTTGGTATTGAATATGTGTTTTGTGAAGTTATTGATTTTGAGTATGGGGGAGCTTTTGAGTGAGAATTTTGTTGGAGTTTAAACTCTATGATGTATTATTTGATGTTTTATTGTTGAAGTATGAAAGCTTTGGATGTGGTTTATGTTTATTGTTGGAACTTGAAACTTGTGAATTAAATTTGTTATATAGTTGTTGTGATGCGGAGGCGGACTTTTGAGTGAAAATTTTGTTGGAGTTTAAACTCTTGGATGTGTTATTTGATGTTTTATTGTTGAAGTATGAAAGATTTGGATGTGGTTTATGTTTATTGTTGGAACTTCAAACTTGTGAATGAAATTTGTTATATAGTTGTTGTGATGGGGATGGGACTTTTGAGTGAGAATTTGTTAACTCTTGGATGTATTATTTGATGTTTTATTGTTGAAGTATGAAAGATTTGGATGTGGTTTATGTTTATTGTTGGACTTGAAACTTGTGAATGAAATTTGTTACATACTTGTTGAGGTGGGGAGGGGACTTTTGAATGAGAATTTTGTTGGAAACTCTTGAATATAAATATGTTTTAATGAATGTGTTTATGTGTAATTTGTTATATTATATATTATCATTTTGATTTTGGATGTATTTTTAAGGTAAAAAACATTGATTACATGAAATTATTTGTGCAGGATTGAAACATAATCCCTTATGATCGTGAAATTGTGAACAGCTTTCGATTTGGAAAAATTGTCGCTGTTATTATATTAGAACAATGTGAAAAAGACTTGATTTTGACACATGACATATGTTTTGCTTTTCAAGTTTGTATATTTTGTATTTACACTATGTTTATTTTTAATGTGATTTACTATTTCTATATTATCATTTATCGTATTTTTTTATAGTTACAGGAAATATAGCAATACTGAGTAGATATATTGAAGTTTAGTTTTTATTTAGCGACGAAATACTGAAAACGTCATTTTATTTAGAGGCAAAATTGTACAATGTCACAATAAGAAAGAAAAAATGTACAAGTAAAAAATATATATATAATAAATAAACAGCGACGAAAATAAATTAGTGCGTGTTCATGGCTAGGTCTGCTGAACTTAGCGACAAAATATTGCTTTCGTCGCTGTTTAACGACGAAACTAGCGCCTGCGACGAAATATCTTTCGTCGCTGAATTTAGCTACGAGAATCGTTTTTGTCGCTAACTTCAGCGACGAAAGCAATATTTTCGTCGCTGGGACTAGCGACACGCGCCTTTTCGTCGCACGCTTCCACTGACTACGGGTTTCAGGGGACGCGCTCAGCGACGATTTGGTTTTCGTCGCTGTTGACTATCAGCGACGAAACGGAGGCTTCAGCAACGAAATAATTTCGTCGCTGAAGCTCATTTTCCTTGTAGTGGTAATAGTAGAACCAAATGGATTAATCTTGATGTATCGTCTTTTATGGAGATGAGGTATTTTATTTCTGAATAATCTGTGTAGACGACCACCTTTGTTCATACTTATATATGAATTTTTCAAAAGCAAATACTACAATTAACAACTCCTTTCAAATTATTGTGTAGTTAAGCTAAGCACCTGTTAATATCTTGTTGGGGTAATACATAGGAGGCATGATCTTGTTATTCCTTTACCATGGTGTAGCTCCGAAGTTACTAGTATCACACATTAGTTCAAATGGAAGTGACCATTTTGTTCAATAATTATAGGAGTAGACACTAAAACGATTTTAAATTGGTTGAAAGCGTTGAAGCAATCTTCACTGCGAATAAACTGTCTATTTTGCTCCAGCAAGTTATACAGTGATTTGACCTTAGAAAACTCCATAATGAACCTATTATAGAATCCAACTTGCTCCAAGAAACTTTTACCTTCTTTTATTATCGAGGGTGTAGTTAATTTGTCAATGACTTCAACATTATCTTTATCCTCTTTTATTTCGTTGTTTAGGATGTAGTGGCCTAAGACAATGCCTTCGTACACCATAAAATAACACTTTTTACAGTTTAAAACTAAGTTTGTCTCTTCACATATCTTCGATACGGTTTCCAAATTTGGATAAGCAGGCTATGAACGTTTTCCTATAGAATGAGAACTAATTCTTGAATACTTTTAAAGTTTGCTCTACCATGTCTGAAAATATCGACATCATACAATATTGAAATGTTGGTGGCGCATTGCAAAGATCAAAAGGCATTTGTCTAAATGCAAACGTTCCATATGAACATGTGATTGTAGTTTTCTCTTGGTCTTTTAGAGTTATATTGATACGGTTATAACTGGAATACTGATTGCCCTTGTTTACAAGGGTAAAAAGGAGTTCATTTATGTTCGTTTTGACTCCCATTTAGAAATGATCTTTAAAGGCTTAGTTTTGAGTCCAAATGTTGAATAATCATCTAAAAATAATCTACAGACATGTACTAGGGGTGAGCATGGGAACCTGAAAAATCGAGCCGACCAACCAAAACCAACTAAAAAGAGGTCGATCAGTCGGTTTTACATATTGCAGTTCGGCGTCGGTTTTGGGATCCCAGAATCGAAAATGTTGGTCGGTCGGCGGCCTTAGACCAGGCGATACCGACCGACCGACCGACAATATTATCTTTTATTATTAATTTTTATTTATAAAAAAAATATTAAACACACACACAATAGAATACACATTAGGGTTCTTTGTTTAGTTCTCTTTAGTCATCTCCTCTCTCTACCGTCGTCGCCGTGTTATCTGATCTCTTGCTCTCACAGTCTCACTCTCAACTCTCATCTCATTTCTCAGTCCCTCCGCCGTTGCCCTCCTCCATCATTGCACCTTGCCACGTCGCCACCGCCTACCACACTTCCTCTGTTCTCCCTCTTCTTCGCCTTCGCCATCCAACCGCCCCATGTTCTCCTCGTCGTCACCGTCCAACCGCTCCCCCCTCTATTCTCCTCATAGTCGCCACTTGTCGTCCAACCGCCCCCCGTTCACTCTCTCTCACACCGGCGCTCCTCCCGTTCCCGAAACGGCAGCATCAGAGTTTACAGCTTCAGCTCCTCCACCGGTTACACAGGAATTGCCAGCATCACGAGCACCATCTGCAGCACTCAAGACACCTGAGTAA

mRNA sequence

ATGTCTTCAGATGGTGACTCTAATGGAGAACCAGGGGTTTGCATAGAATCTCGAGGAGTGGTCTTAGACAAGCTGATAGCTGCGAATACAGTCTCACTCTCAACTCTCATCTCATTTCTCAGTCCCTCCGCCGTTGCCCTCCTCCATCATTGCACCTTGCCACGTCGCCACCGCCTACCACACTTCCTCTGTTCTCCCTCTTCTTCGCCTTCGCCATCCAACCGCCCCATGTTCTCCTCGTCGTCACCGTCCAACCGCTCCCCCCTCTATTCTCCTCATAGTCGCCACTTGTCGTCCAACCGCCCCCCGTTCACTCTCTCTCACACCGGCGCTCCTCCCGTTCCCGAAACGGCAGCATCAGAGTTTACAGCTTCAGCTCCTCCACCGGTTACACAGGAATTGCCAGCATCACGAGCACCATCTGCAGCACTCAAGACACCTGAGTAA

Coding sequence (CDS)

ATGTCTTCAGATGGTGACTCTAATGGAGAACCAGGGGTTTGCATAGAATCTCGAGGAGTGGTCTTAGACAAGCTGATAGCTGCGAATACAGTCTCACTCTCAACTCTCATCTCATTTCTCAGTCCCTCCGCCGTTGCCCTCCTCCATCATTGCACCTTGCCACGTCGCCACCGCCTACCACACTTCCTCTGTTCTCCCTCTTCTTCGCCTTCGCCATCCAACCGCCCCATGTTCTCCTCGTCGTCACCGTCCAACCGCTCCCCCCTCTATTCTCCTCATAGTCGCCACTTGTCGTCCAACCGCCCCCCGTTCACTCTCTCTCACACCGGCGCTCCTCCCGTTCCCGAAACGGCAGCATCAGAGTTTACAGCTTCAGCTCCTCCACCGGTTACACAGGAATTGCCAGCATCACGAGCACCATCTGCAGCACTCAAGACACCTGAGTAA

Protein sequence

MSSDGDSNGEPGVCIESRGVVLDKLIAANTVSLSTLISFLSPSAVALLHHCTLPRRHRLPHFLCSPSSSPSPSNRPMFSSSSPSNRSPLYSPHSRHLSSNRPPFTLSHTGAPPVPETAASEFTASAPPPVTQELPASRAPSAALKTPE
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 61..148
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 64..106

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC10g_new0236.1MC10g_new0236.1mRNA