MC10g_new0222 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC10g_new0222
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	CACTA en-spm transposon protein
Location	MC10: 10348333 .. 10348888 (+)
RNA-Seq Expression	MC10g_new0222
Synteny	MC10g_new0222

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCATTCAACCATCGTGCAGGGCCGAAGGCGTTTGCTATTATTGGGAAGGAAAAGGTACAATGCAATAATATTTTTTTAGCCATATACTTATATTACTTAAGATCGATTATCAACAATTATGTGTTATCAATTGCAGAAAGAAGAAGAGGGAGGTGACAACTTTTCTGAAATCGATTTGCTCAATCAGAAGAGATACTCTGACACTAAAAGTTGGGTCGAAGGAGGAGAGACAGCTTACGTAAGTTTACAAATCTTATAACAATTAACTTCAAATTACGCATTGAATTTTATGTGTAAACATTTTGTTCTTTTTTAAATATGTATGCAGCTAGATATGATGCGTGTTAGAGAAGAATCTATGCAAGACGGAGGCGAACCGATGCCAGACCCAGAAGTATTAGAAATAGTTCTTGGTTATCGATCAGGCTACATTAAGAGTGCTGGTTGGGGCCCAAAACCAAAGTCTCGTAGAAGTTCTGCTTCAAGTGTAGCATCTTCACAGCGGGAAGAAGTGCTGTCTCAAGAAATATATACTCTAAGAGAAGAATTTTAG

mRNA sequence

ATGCCATTCAACCATCGTGCAGGGCCGAAGGCGTTTGCTATTATTGGGAAGGAAAAGAAAGAAGAAGAGGGAGGTGACAACTTTTCTGAAATCGATTTGCTCAATCAGAAGAGATACTCTGACACTAAAAGTTGGGTCGAAGGAGGAGAGACAGCTTACCTAGATATGATGCGTGTTAGAGAAGAATCTATGCAAGACGGAGGCGAACCGATGCCAGACCCAGAAGTATTAGAAATAGTTCTTGGTTATCGATCAGGCTACATTAAGAGTGCTGGTTGGGGCCCAAAACCAAAGTCTCGTAGAAGTTCTGCTTCAAGTGTAGCATCTTCACAGCGGGAAGAAGTGCTGTCTCAAGAAATATATACTCTAAGAGAAGAATTTTAG

Coding sequence (CDS)

ATGCCATTCAACCATCGTGCAGGGCCGAAGGCGTTTGCTATTATTGGGAAGGAAAAGAAAGAAGAAGAGGGAGGTGACAACTTTTCTGAAATCGATTTGCTCAATCAGAAGAGATACTCTGACACTAAAAGTTGGGTCGAAGGAGGAGAGACAGCTTACCTAGATATGATGCGTGTTAGAGAAGAATCTATGCAAGACGGAGGCGAACCGATGCCAGACCCAGAAGTATTAGAAATAGTTCTTGGTTATCGATCAGGCTACATTAAGAGTGCTGGTTGGGGCCCAAAACCAAAGTCTCGTAGAAGTTCTGCTTCAAGTGTAGCATCTTCACAGCGGGAAGAAGTGCTGTCTCAAGAAATATATACTCTAAGAGAAGAATTTTAG

Protein sequence

MPFNHRAGPKAFAIIGKEKKEEEGGDNFSEIDLLNQKRYSDTKSWVEGGETAYLDMMRVREESMQDGGEPMPDPEVLEIVLGYRSGYIKSAGWGPKPKSRRSSASSVASSQREEVLSQEIYTLREEF

Homology

[Close]

BLAST of MC10g_new0222 vs. NCBI nr
Match: XP_038887413.1 (uncharacterized protein LOC120077557 isoform X5 [Benincasa hispida])

HSP 1 Score: 82.0 bits (201), Expect = 3.55e-15
Identity = 47/110 (42.73%), Postives = 63/110 (57.27%), Query Frame = 0


Query: 1   MPFNHRAGPKAFAIIGKEKKEEEGGDNFSEIDLLNQKRYSDTKSWVEGG-ETAYLDMMRV 60
           +P+ HR G K+F  +  E K +EG D   ++DL  Q  + +   WV    + AYL+M R+
Sbjct: 566 IPYLHRTGSKSFVQVQSEMKIKEGRD-VDQVDLFRQSHFCEKDGWVNNNAKDAYLEMQRL 625

Query: 61  REESMQDGGEPMPDPEVLEIVLGYRSGYIKSAGWGPKPKSRRSSASSVAS 109
            E S Q+   PM   EV + VLG+RSGYIK  G  PKP    SS+SSV S
Sbjct: 626 MEASFQEDPTPMSSVEVCKQVLGHRSGYIKGLGLNPKP----SSSSSVTS 670

[Close]

BLAST of MC10g_new0222 vs. NCBI nr
Match: XP_038887409.1 (poly [ADP-ribose] polymerase 1-like isoform X2 [Benincasa hispida])

HSP 1 Score: 82.0 bits (201), Expect = 3.61e-15
Identity = 47/110 (42.73%), Postives = 63/110 (57.27%), Query Frame = 0


Query: 1   MPFNHRAGPKAFAIIGKEKKEEEGGDNFSEIDLLNQKRYSDTKSWVEGG-ETAYLDMMRV 60
           +P+ HR G K+F  +  E K +EG D   ++DL  Q  + +   WV    + AYL+M R+
Sbjct: 727 IPYLHRTGSKSFVQVQSEMKIKEGRD-VDQVDLFRQSHFCEKDGWVNNNAKDAYLEMQRL 786

Query: 61  REESMQDGGEPMPDPEVLEIVLGYRSGYIKSAGWGPKPKSRRSSASSVAS 109
            E S Q+   PM   EV + VLG+RSGYIK  G  PKP    SS+SSV S
Sbjct: 787 MEASFQEDPTPMSSVEVCKQVLGHRSGYIKGLGLNPKP----SSSSSVTS 831

[Close]

BLAST of MC10g_new0222 vs. NCBI nr
Match: XP_038887408.1 (poly [ADP-ribose] polymerase 1-like isoform X1 [Benincasa hispida])

HSP 1 Score: 82.0 bits (201), Expect = 3.62e-15
Identity = 47/110 (42.73%), Postives = 63/110 (57.27%), Query Frame = 0


Query: 1   MPFNHRAGPKAFAIIGKEKKEEEGGDNFSEIDLLNQKRYSDTKSWVEGG-ETAYLDMMRV 60
           +P+ HR G K+F  +  E K +EG D   ++DL  Q  + +   WV    + AYL+M R+
Sbjct: 754 IPYLHRTGSKSFVQVQSEMKIKEGRD-VDQVDLFRQSHFCEKDGWVNNNAKDAYLEMQRL 813

Query: 61  REESMQDGGEPMPDPEVLEIVLGYRSGYIKSAGWGPKPKSRRSSASSVAS 109
            E S Q+   PM   EV + VLG+RSGYIK  G  PKP    SS+SSV S
Sbjct: 814 MEASFQEDPTPMSSVEVCKQVLGHRSGYIKGLGLNPKP----SSSSSVTS 858

[Close]

BLAST of MC10g_new0222 vs. NCBI nr
Match: XP_019081922.1 (PREDICTED: uncharacterized protein LOC100261419 isoform X1 [Vitis vinifera])

HSP 1 Score: 74.3 bits (181), Expect = 1.40e-12
Identity = 36/100 (36.00%), Postives = 59/100 (59.00%), Query Frame = 0


Query: 1   MPFNHRAGPKAFAIIGKEKKEEEG-GDNFSEIDLLNQKRYSDTKSWV-EGGETAYLDMMR 60
           +PFNHR G K FA   +        G+   E++L     Y+++K W+ +  ++ Y +M +
Sbjct: 245 LPFNHRGGSKPFAFHRQHNSMSVATGELQGEVELFRATHYNESKGWINDTAKSRYEEMRK 304

Query: 61  VREESMQDGGEPMPDPEVLEIVLGYRSGYIKSAGWGPKPK 98
           ++E+S QDG  P+ D E+ + VLG RSGYI+  G+G + K
Sbjct: 305 LQEQSTQDGDTPISDLEITQRVLGKRSGYIRGLGYGSRLK 344

[Close]

BLAST of MC10g_new0222 vs. NCBI nr
Match: RVW68393.1 (hypothetical protein CK203_061681 [Vitis vinifera])

HSP 1 Score: 74.3 bits (181), Expect = 1.50e-12
Identity = 36/100 (36.00%), Postives = 59/100 (59.00%), Query Frame = 0


Query: 1   MPFNHRAGPKAFAIIGKEKKEEEG-GDNFSEIDLLNQKRYSDTKSWV-EGGETAYLDMMR 60
           +PFNHR G K FA   +        G+   E++L     Y+++K W+ +  ++ Y +M +
Sbjct: 245 LPFNHRGGSKPFAFHRQHNSMSVATGELQGEVELFRATHYNESKGWINDTAKSRYEEMRK 304

Query: 61  VREESMQDGGEPMPDPEVLEIVLGYRSGYIKSAGWGPKPK 98
           ++E+S QDG  P+ D E+ + VLG RSGYI+  G+G + K
Sbjct: 305 LQEQSTQDGDTPISDLEITQRVLGKRSGYIRGLGYGSRLK 344

[Close]

BLAST of MC10g_new0222 vs. ExPASy TrEMBL
Match: A0A438G848 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_061681 PE=4 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 7.26e-13
Identity = 36/100 (36.00%), Postives = 59/100 (59.00%), Query Frame = 0


Query: 1   MPFNHRAGPKAFAIIGKEKKEEEG-GDNFSEIDLLNQKRYSDTKSWV-EGGETAYLDMMR 60
           +PFNHR G K FA   +        G+   E++L     Y+++K W+ +  ++ Y +M +
Sbjct: 245 LPFNHRGGSKPFAFHRQHNSMSVATGELQGEVELFRATHYNESKGWINDTAKSRYEEMRK 304

Query: 61  VREESMQDGGEPMPDPEVLEIVLGYRSGYIKSAGWGPKPK 98
           ++E+S QDG  P+ D E+ + VLG RSGYI+  G+G + K
Sbjct: 305 LQEQSTQDGDTPISDLEITQRVLGKRSGYIRGLGYGSRLK 344

[Close]

BLAST of MC10g_new0222 vs. ExPASy TrEMBL
Match: A0A438JSE8 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_009494 PE=4 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 7.38e-13
Identity = 36/100 (36.00%), Postives = 59/100 (59.00%), Query Frame = 0


Query: 1   MPFNHRAGPKAFAIIGKEKKEEEG-GDNFSEIDLLNQKRYSDTKSWV-EGGETAYLDMMR 60
           +PFNHR G K FA   +        G+   E++L     Y+++K W+ +  ++ Y +M +
Sbjct: 253 LPFNHRGGSKPFAFHRQHNSMSVATGELQGEVELFRATHYNESKGWINDTAKSRYEEMRK 312

Query: 61  VREESMQDGGEPMPDPEVLEIVLGYRSGYIKSAGWGPKPK 98
           ++E+S QDG  P+ D E+ + VLG RSGYI+  G+G + K
Sbjct: 313 LQEQSTQDGDTPISDLEITQRVLGKRSGYIRGLGYGSRLK 352

[Close]

BLAST of MC10g_new0222 vs. ExPASy TrEMBL
Match: A0A438D3L2 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_104581 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 8.53e-13
Identity = 36/100 (36.00%), Postives = 59/100 (59.00%), Query Frame = 0


Query: 1   MPFNHRAGPKAFAIIGKEKKEEEG-GDNFSEIDLLNQKRYSDTKSWV-EGGETAYLDMMR 60
           +PFNHR G K FA   +        G+   E++L     Y+++K W+ +  ++ Y +M +
Sbjct: 143 LPFNHRGGSKPFAFHRQHNLMSVATGELQGEVELFRATHYNESKGWINDTAKSRYEEMRK 202

Query: 61  VREESMQDGGEPMPDPEVLEIVLGYRSGYIKSAGWGPKPK 98
           ++E+S QDG  P+ D E+ + VLG RSGYI+  G+G + K
Sbjct: 203 LQEQSTQDGDTPISDLEITQRVLGKRSGYIRGLGYGSRLK 242

[Close]

BLAST of MC10g_new0222 vs. ExPASy TrEMBL
Match: A0A438CDA5 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_109891 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 1.35e-12
Identity = 36/100 (36.00%), Postives = 59/100 (59.00%), Query Frame = 0


Query: 1   MPFNHRAGPKAFAIIGKEKKEEEG-GDNFSEIDLLNQKRYSDTKSWV-EGGETAYLDMMR 60
           +PFNHR G K FA   +        G+   E+ L +   Y+++K W+ +  ++ Y +M +
Sbjct: 243 LPFNHRGGSKPFAFHRQHNSMSVATGELQGEVKLFHATHYNESKGWINDTAKSRYEEMRK 302

Query: 61  VREESMQDGGEPMPDPEVLEIVLGYRSGYIKSAGWGPKPK 98
           ++E+S QDG  P+ D E+ + VLG RSGYI+  G+G + K
Sbjct: 303 LQEQSTQDGDTPISDLEITQRVLGKRSGYIRGLGYGSRLK 342

[Close]

BLAST of MC10g_new0222 vs. ExPASy TrEMBL
Match: A0A438IVS2 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_026402 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 1.36e-12
Identity = 36/100 (36.00%), Postives = 59/100 (59.00%), Query Frame = 0


Query: 1   MPFNHRAGPKAFAIIGKEKKEEEG-GDNFSEIDLLNQKRYSDTKSWV-EGGETAYLDMMR 60
           +PFNHR G K FA   +        G+   E++L     Y+++K W+ +  ++ Y +M +
Sbjct: 246 LPFNHRGGSKPFAFHRQHNSMSVATGELQGEVELFRATHYNESKGWINDTTKSRYEEMRK 305

Query: 61  VREESMQDGGEPMPDPEVLEIVLGYRSGYIKSAGWGPKPK 98
           ++E+S QDG  P+ D E+ + VLG RSGYI+  G+G + K
Sbjct: 306 LQEQSTQDGDTPISDLEITQRVLGKRSGYIRGLGYGSRLK 345

The following BLAST results are available for this feature:

BLAST of MC10g_new0222 vs.


Match Name	E-value	Identity	Description

BLAST of MC10g_new0222 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038887413.1	3.55e-15	42.73	uncharacterized protein LOC120077557 isoform X5 [Benincasa hispida]	[more]
XP_038887409.1	3.61e-15	42.73	poly [ADP-ribose] polymerase 1-like isoform X2 [Benincasa hispida]	[more]
XP_038887408.1	3.62e-15	42.73	poly [ADP-ribose] polymerase 1-like isoform X1 [Benincasa hispida]	[more]
XP_019081922.1	1.40e-12	36.00	PREDICTED: uncharacterized protein LOC100261419 isoform X1 [Vitis vinifera]	[more]
RVW68393.1	1.50e-12	36.00	hypothetical protein CK203_061681 [Vitis vinifera]	[more]

BLAST of MC10g_new0222 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A438G848	7.26e-13	36.00	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_061681 PE=4 SV=1	[more]
A0A438JSE8	7.38e-13	36.00	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_009494 PE=4 SV=1	[more]
A0A438D3L2	8.53e-13	36.00	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_104581 PE=4 SV=1	[more]
A0A438CDA5	1.35e-12	36.00	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_109891 PE=4 SV=1	[more]
A0A438IVS2	1.36e-12	36.00	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_026402 PE=4 SV=1	[more]

BLAST of MC10g_new0222 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 99..115
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 89..115

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC10g_new0222.1	MC10g_new0222.1	mRNA