MC10g_new0195 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC10g_new0195
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	ubiquitin-like
Location	MC10: 9710826 .. 9712126 (-)
RNA-Seq Expression	MC10g_new0195
Synteny	MC10g_new0195

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAGCCATGGCAACTTCAATTCCATTGGACCCATGTGATATCTTACGAAAGCCCATTTCTTTAAATCATTTCTTGGGTTGGTTGGTCCAACTGAACCAACCCTGATTACTGATACACCCACATATATAAGCATCTTATTGAAGAAGACTCCAAGAGAGAGAAAAAGGTCTGAGTTTTACTTTTCTTGGAGGCTACTTCATCTTCCTCGCGTTCTGCCGATAGATTTCAAAGAGGGAGGCAGATTTGGTGATCTCCGGCATCGGTGGTAAGATCTTTGTTTTTTTTTCCTCTTCGATTTTCCAGATCCGATATCGCTGTACCGATTCTATTCTTGACTAGTAAAAATCTCGCGATCCTTGCAAGTGATCTCTAGTAAGCAAAAATCTCGCAATTCAAGTGGAGTAGGTCGTTGAGACCCTGTAATTTTTTCTGGGAATAAACAACTTATTTCAGTGCTGAGAATTTTAATATAAATTTAAAATCGCCCATTAGACTCGATGATTAAAATTACAGCCAGGTTGAATTGAATGCGCTCAATTTTTGAAATATGAAGCAGAAAAGAAGAAAAGGACATTGGTAAAAGTTGAGAGGGTGAAGAAGAAAAAGCCATGGCAAGTTCAATTCCTTCCTACGAAACCTCAGAGTCAATCTCCATTGGGGCAGTGATTAAAGCCGTGCAAGCATTACCAGACATGGACGAAGACTTCATATTAGACGCATGTGATTTCTTACAGAACCCACAGAATGGCGAAATATTCATGGCCTTGGCCCCCAAGCTACGAAAAAGATGGCTATTAAGAAATCTACCTCGACCCGGCCAGGTTTTATCATCATTCAATTATTAAGCATTGATTAATCATATATATATATATATATATATTTCTGTTTTGTTTAAGAGTAGTTGAAAATATGGCAGATGAAGATAAATTTTCAAACTGTGTGTGGGAAGAGATTTGGTTTAGAGGTTTTAGCGTCGGACACAGTAGAAGTGGTGAAGGCTAAAATAGAAGGGAAGGAAGGGTATCCTCCGGAGAAGCAGCGGCTGTTTTATGGCGGTGTACAGCTTGAGGGCGCCACAACTCTAGCGGAATGCCGTGTCACCCCTGGCTCTGAATTGAAAATCATTCTTCCAAAGTGTGGTGGCCATTAACGCTCTAGCTCTTTGTTACTTTACTTTCAATATTTTTGTGTGTATTTAAAAAGTGTGATTATCTTCTGTAAAATCCTAACGACTGCCTAATTGTGTTACTTTATGGATGTTGTTGAGTCCAATGAGAAAATATAGAGGATGATTCCATGAC

mRNA sequence

ATGGCAAGTTCAATTCCTTCCTACGAAACCTCAGAGTCAATCTCCATTGGGGCAGTGATTAAAGCCGTGCAAGCATTACCAGACATGGACGAAGACTTCATATTAGACGCATGTGATTTCTTACAGAACCCACAGAATGGCGAAATATTCATGGCCTTGGCCCCCAAGCTACGAAAAAGATGGCTATTAAGAAATCTACCTCGACCCGGCCAGATGAAGATAAATTTTCAAACTGTGTGTGGGAAGAGATTTGGTTTAGAGGTTTTAGCGTCGGACACAGTAGAAGTGGTGAAGGCTAAAATAGAAGGGAAGGAAGGGTATCCTCCGGAGAAGCAGCGGCTGTTTTATGGCGGTGTACAGCTTGAGGGCGCCACAACTCTAGCGGAATGCCGTGTCACCCCTGGCTCTGAATTGAAAATCATTCTTCCAAAGTGTGGTGGCCATTAA

Coding sequence (CDS)

ATGGCAAGTTCAATTCCTTCCTACGAAACCTCAGAGTCAATCTCCATTGGGGCAGTGATTAAAGCCGTGCAAGCATTACCAGACATGGACGAAGACTTCATATTAGACGCATGTGATTTCTTACAGAACCCACAGAATGGCGAAATATTCATGGCCTTGGCCCCCAAGCTACGAAAAAGATGGCTATTAAGAAATCTACCTCGACCCGGCCAGATGAAGATAAATTTTCAAACTGTGTGTGGGAAGAGATTTGGTTTAGAGGTTTTAGCGTCGGACACAGTAGAAGTGGTGAAGGCTAAAATAGAAGGGAAGGAAGGGTATCCTCCGGAGAAGCAGCGGCTGTTTTATGGCGGTGTACAGCTTGAGGGCGCCACAACTCTAGCGGAATGCCGTGTCACCCCTGGCTCTGAATTGAAAATCATTCTTCCAAAGTGTGGTGGCCATTAA

Protein sequence

MASSIPSYETSESISIGAVIKAVQALPDMDEDFILDACDFLQNPQNGEIFMALAPKLRKRWLLRNLPRPGQMKINFQTVCGKRFGLEVLASDTVEVVKAKIEGKEGYPPEKQRLFYGGVQLEGATTLAECRVTPGSELKIILPKCGGH

Homology

[Close]

BLAST of MC10g_new0195 vs. ExPASy Swiss-Prot
Match: P0CH27 (Ubiquitin-60S ribosomal protein L40 OS=Trypanosoma cruzi OX=5693 PE=2 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 4.4e-13
Identity = 38/78 (48.72%), Postives = 51/78 (65.38%), Query Frame = 0


Query: 70  GQMKINFQTVCGKRFGLEVLASDTVEVVKAKIEGKEGYPPEKQRLFYGGVQLEGATTLAE 129
           G M+I  +T+ GK   LEV +SDT+E VKAKI+ KEG PP++QRL + G QLE   TLA+
Sbjct: 75  GGMQIFVKTLTGKTIALEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD 134

Query: 130 CRVTPGSELKIILPKCGG 148
             +   S L ++L   GG
Sbjct: 135 YNIQKESTLHLVLRLRGG 152

[Close]

BLAST of MC10g_new0195 vs. ExPASy Swiss-Prot
Match: Q39256 (Polyubiquitin 8 OS=Arabidopsis thaliana OX=3702 GN=UBQ8 PE=3 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 4.4e-13
Identity = 38/78 (48.72%), Postives = 50/78 (64.10%), Query Frame = 0


Query: 70  GQMKINFQTVCGKRFGLEVLASDTVEVVKAKIEGKEGYPPEKQRLFYGGVQLEGATTLAE 129
           G M+I  QT+ GK   LEV +SDT++ VKAKI+ KEG  P +QRL + G QLE   TLA+
Sbjct: 77  GGMQIFVQTLTGKTITLEVKSSDTIDNVKAKIQDKEGILPRQQRLIFAGKQLEDGRTLAD 136

Query: 130 CRVTPGSELKIILPKCGG 148
             +   S L ++L  CGG
Sbjct: 137 YNIQKESTLHLVLRLCGG 154

[Close]

BLAST of MC10g_new0195 vs. ExPASy Swiss-Prot
Match: P21899 (Ubiquitin-60S ribosomal protein L40 OS=Trypanosoma brucei brucei OX=5702 PE=1 SV=2)

HSP 1 Score: 75.1 bits (183), Expect = 7.5e-13
Identity = 38/76 (50.00%), Postives = 50/76 (65.79%), Query Frame = 0


Query: 72  MKINFQTVCGKRFGLEVLASDTVEVVKAKIEGKEGYPPEKQRLFYGGVQLEGATTLAECR 131
           M+I  +T+ GK   LEV ASDT+E VKAKI+ KEG PP++QRL + G QLE   TLA+  
Sbjct: 1   MQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYN 60

Query: 132 VTPGSELKIILPKCGG 148
           +   S L ++L   GG
Sbjct: 61  IQKESTLHLVLRLRGG 76

[Close]

BLAST of MC10g_new0195 vs. ExPASy Swiss-Prot
Match: P0CG71 (Polyubiquitin-A OS=Caenorhabditis elegans OX=6239 GN=ubq-1 PE=3 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 7.5e-13
Identity = 38/78 (48.72%), Postives = 51/78 (65.38%), Query Frame = 0


Query: 70  GQMKINFQTVCGKRFGLEVLASDTVEVVKAKIEGKEGYPPEKQRLFYGGVQLEGATTLAE 129
           G M+I  +T+ GK   LEV ASDT+E VKAKI+ KEG PP++QRL + G QLE   TL++
Sbjct: 75  GGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 134

Query: 130 CRVTPGSELKIILPKCGG 148
             +   S L ++L   GG
Sbjct: 135 YNIQKESTLHLVLRLRGG 152

[Close]

BLAST of MC10g_new0195 vs. ExPASy Swiss-Prot
Match: P59669 (Polyubiquitin OS=Geodia cydonium OX=6047 PE=2 SV=2)

HSP 1 Score: 75.1 bits (183), Expect = 7.5e-13
Identity = 38/78 (48.72%), Postives = 51/78 (65.38%), Query Frame = 0


Query: 70  GQMKINFQTVCGKRFGLEVLASDTVEVVKAKIEGKEGYPPEKQRLFYGGVQLEGATTLAE 129
           G M+I  +T+ GK   LEV ASDT+E VKAKI+ KEG PP++QRL + G QLE   TL++
Sbjct: 75  GGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 134

Query: 130 CRVTPGSELKIILPKCGG 148
             +   S L ++L   GG
Sbjct: 135 YNIQKESTLHLVLRLRGG 152

[Close]

BLAST of MC10g_new0195 vs. NCBI nr
Match: XP_022154969.1 (ubiquitin-like [Momordica charantia])

HSP 1 Score: 300 bits (769), Expect = 7.81e-103
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0


Query: 1   MASSIPSYETSESISIGAVIKAVQALPDMDEDFILDACDFLQNPQNGEIFMALAPKLRKR 60
           MASSIPSYETSESISIGAVIKAVQALPDMDEDFILDACDFLQNPQNGEIFMALAPKLRKR
Sbjct: 1   MASSIPSYETSESISIGAVIKAVQALPDMDEDFILDACDFLQNPQNGEIFMALAPKLRKR 60

Query: 61  WLLRNLPRPGQMKINFQTVCGKRFGLEVLASDTVEVVKAKIEGKEGYPPEKQRLFYGGVQ 120
           WLLRNLPRPGQMKINFQTVCGKRFGLEVLASDTVEVVKAKIEGKEGYPPEKQRLFYGGVQ
Sbjct: 61  WLLRNLPRPGQMKINFQTVCGKRFGLEVLASDTVEVVKAKIEGKEGYPPEKQRLFYGGVQ 120

Query: 121 LEGATTLAECRVTPGSELKIILPKCGGH 148
           LEGATTLAECRVTPGSELKIILPKCGGH
Sbjct: 121 LEGATTLAECRVTPGSELKIILPKCGGH 148

[Close]

BLAST of MC10g_new0195 vs. NCBI nr
Match: XP_022154970.1 (ubiquitin-like isoform X1 [Momordica charantia] >XP_022154971.1 ubiquitin-like isoform X1 [Momordica charantia])

HSP 1 Score: 190 bits (483), Expect = 2.65e-59
Identity = 95/137 (69.34%), Postives = 108/137 (78.83%), Query Frame = 0


Query: 10  TSESISIGAVIKAVQALPDMDEDFILDACDFLQNPQNGEIFMALAPKLRKRWLLRNLPRP 69
           +S SISIGAVIKAVQALPDMDED ILDACDF QNPQNGEIFMAL  KLRKRWLLRNLPR 
Sbjct: 7   SSGSISIGAVIKAVQALPDMDEDLILDACDFFQNPQNGEIFMALDRKLRKRWLLRNLPRS 66

Query: 70  GQMKINFQTVCGKRFGLEVLASDTVEVVKAKIEGKEGYPPEKQRLFYGGVQLEGATTLAE 129
           GQM+IN + + GK    E+LAS+T++VVKAKIE  EGYPP++QRL YGG QLE   TLAE
Sbjct: 67  GQMQINVKMLTGKTLCFEILASNTIDVVKAKIEAMEGYPPDQQRLIYGGRQLEDGRTLAE 126

Query: 130 CRVTPGSELKIILPKCG 146
             +  GS L ++   CG
Sbjct: 127 YNIRSGSTLHMVTRLCG 143

[Close]

BLAST of MC10g_new0195 vs. NCBI nr
Match: XP_022154972.1 (ubiquitin-like isoform X2 [Momordica charantia])

HSP 1 Score: 183 bits (464), Expect = 1.94e-56
Identity = 94/137 (68.61%), Postives = 106/137 (77.37%), Query Frame = 0


Query: 10  TSESISIGAVIKAVQALPDMDEDFILDACDFLQNPQNGEIFMALAPKLRKRWLLRNLPRP 69
           +S SISIGAVIKAVQALPDMDED ILDACDF QNPQNGEIFMAL  KLRKRWLLRNLPR 
Sbjct: 7   SSGSISIGAVIKAVQALPDMDEDLILDACDFFQNPQNGEIFMALDRKLRKRWLLRNLPRS 66

Query: 70  GQMKINFQTVCGKRFGLEVLASDTVEVVKAKIEGKEGYPPEKQRLFYGGVQLEGATTLAE 129
           GQ  IN + + GK    E+LAS+T++VVKAKIE  EGYPP++QRL YGG QLE   TLAE
Sbjct: 67  GQ--INVKMLTGKTLCFEILASNTIDVVKAKIEAMEGYPPDQQRLIYGGRQLEDGRTLAE 126

Query: 130 CRVTPGSELKIILPKCG 146
             +  GS L ++   CG
Sbjct: 127 YNIRSGSTLHMVTRLCG 141

[Close]

BLAST of MC10g_new0195 vs. NCBI nr
Match: XP_008463442.1 (PREDICTED: polyubiquitin-like [Cucumis melo] >KAA0025478.1 polyubiquitin-like [Cucumis melo var. makuwa] >TYK00387.1 polyubiquitin-like [Cucumis melo var. makuwa])

HSP 1 Score: 126 bits (317), Expect = 4.79e-34
Identity = 64/132 (48.48%), Postives = 92/132 (69.70%), Query Frame = 0


Query: 15  SIGAVIKAVQALPDMDEDFILDACDFLQNPQN-GEIFMALAPKLRKRWLLRNLPRPGQMK 74
           SI  VIKAV+ALPDMDED ILDA DFL + +N  ++F+++  KLR++WL++ L    +M+
Sbjct: 15  SIETVIKAVEALPDMDEDLILDAFDFLMDNENKAKVFISMDAKLRRKWLIKKLRPQPEMQ 74

Query: 75  INFQTVCGKRFGLEVLASDTVEVVKAKIEGKEGYPPEKQRLFYGGVQLEGATTLAECRVT 134
           I  +T+ G++  L+VL +DT+  VKAKIE KEGYP ++QRL + G +L+   TL  C + 
Sbjct: 75  IFVKTLEGRKMSLDVLTTDTINDVKAKIEAKEGYPQQQQRLVFNGWKLDDDRTLGSCGLW 134

Query: 135 PGSELKIILPKC 145
            GS L +IL  C
Sbjct: 135 SGSSLHLILCVC 146

[Close]

BLAST of MC10g_new0195 vs. NCBI nr
Match: KAA0025481.1 (polyubiquitin-like [Cucumis melo var. makuwa] >TYK00384.1 polyubiquitin-like [Cucumis melo var. makuwa])

HSP 1 Score: 99.0 bits (245), Expect = 3.69e-23
Identity = 53/129 (41.09%), Postives = 75/129 (58.14%), Query Frame = 0


Query: 18  AVIKAVQALPDMDEDFILDACDFLQNPQNGEIFMALAPKLRKRWLLRNLPRPGQMKINFQ 77
           A I+AVQAL D+DED   +A DFL+   N ++F+A+   LR RWL R L  P  MKI  +
Sbjct: 20  AAIEAVQALSDIDEDLFFEAFDFLEKKNNAKMFIAMNANLRSRWLRRKLWSPS-MKILLK 79

Query: 78  TVCGKRFGLEVLASDTVEVVKAKIEGKEGYPPEKQRLFYGGVQLEGATTLAECRVTPGSE 137
           T+ GK   ++V A  T+E +K K+  KE Y P K R    G +LE   +L++  +T GS 
Sbjct: 80  TIYGKTIVVKVSAFITIEELKVKLYEKEAYLPTKVRFICAGKELENGRSLSDYNITDGST 139

Query: 138 LKIILPKCG 146
           +  +   CG
Sbjct: 140 IHTLFRVCG 147

[Close]

BLAST of MC10g_new0195 vs. ExPASy TrEMBL
Match: A0A6J1DNT8 (ubiquitin-like OS=Momordica charantia OX=3673 GN=LOC111022114 PE=4 SV=1)

HSP 1 Score: 300 bits (769), Expect = 3.78e-103
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0


Query: 1   MASSIPSYETSESISIGAVIKAVQALPDMDEDFILDACDFLQNPQNGEIFMALAPKLRKR 60
           MASSIPSYETSESISIGAVIKAVQALPDMDEDFILDACDFLQNPQNGEIFMALAPKLRKR
Sbjct: 1   MASSIPSYETSESISIGAVIKAVQALPDMDEDFILDACDFLQNPQNGEIFMALAPKLRKR 60

Query: 61  WLLRNLPRPGQMKINFQTVCGKRFGLEVLASDTVEVVKAKIEGKEGYPPEKQRLFYGGVQ 120
           WLLRNLPRPGQMKINFQTVCGKRFGLEVLASDTVEVVKAKIEGKEGYPPEKQRLFYGGVQ
Sbjct: 61  WLLRNLPRPGQMKINFQTVCGKRFGLEVLASDTVEVVKAKIEGKEGYPPEKQRLFYGGVQ 120

Query: 121 LEGATTLAECRVTPGSELKIILPKCGGH 148
           LEGATTLAECRVTPGSELKIILPKCGGH
Sbjct: 121 LEGATTLAECRVTPGSELKIILPKCGGH 148

[Close]

BLAST of MC10g_new0195 vs. ExPASy TrEMBL
Match: A0A6J1DL46 (ubiquitin-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111022115 PE=4 SV=1)

HSP 1 Score: 190 bits (483), Expect = 1.28e-59
Identity = 95/137 (69.34%), Postives = 108/137 (78.83%), Query Frame = 0


Query: 10  TSESISIGAVIKAVQALPDMDEDFILDACDFLQNPQNGEIFMALAPKLRKRWLLRNLPRP 69
           +S SISIGAVIKAVQALPDMDED ILDACDF QNPQNGEIFMAL  KLRKRWLLRNLPR 
Sbjct: 7   SSGSISIGAVIKAVQALPDMDEDLILDACDFFQNPQNGEIFMALDRKLRKRWLLRNLPRS 66

Query: 70  GQMKINFQTVCGKRFGLEVLASDTVEVVKAKIEGKEGYPPEKQRLFYGGVQLEGATTLAE 129
           GQM+IN + + GK    E+LAS+T++VVKAKIE  EGYPP++QRL YGG QLE   TLAE
Sbjct: 67  GQMQINVKMLTGKTLCFEILASNTIDVVKAKIEAMEGYPPDQQRLIYGGRQLEDGRTLAE 126

Query: 130 CRVTPGSELKIILPKCG 146
             +  GS L ++   CG
Sbjct: 127 YNIRSGSTLHMVTRLCG 143

[Close]

BLAST of MC10g_new0195 vs. ExPASy TrEMBL
Match: A0A6J1DN50 (ubiquitin-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111022115 PE=4 SV=1)

HSP 1 Score: 183 bits (464), Expect = 9.39e-57
Identity = 94/137 (68.61%), Postives = 106/137 (77.37%), Query Frame = 0


Query: 10  TSESISIGAVIKAVQALPDMDEDFILDACDFLQNPQNGEIFMALAPKLRKRWLLRNLPRP 69
           +S SISIGAVIKAVQALPDMDED ILDACDF QNPQNGEIFMAL  KLRKRWLLRNLPR 
Sbjct: 7   SSGSISIGAVIKAVQALPDMDEDLILDACDFFQNPQNGEIFMALDRKLRKRWLLRNLPRS 66

Query: 70  GQMKINFQTVCGKRFGLEVLASDTVEVVKAKIEGKEGYPPEKQRLFYGGVQLEGATTLAE 129
           GQ  IN + + GK    E+LAS+T++VVKAKIE  EGYPP++QRL YGG QLE   TLAE
Sbjct: 67  GQ--INVKMLTGKTLCFEILASNTIDVVKAKIEAMEGYPPDQQRLIYGGRQLEDGRTLAE 126

Query: 130 CRVTPGSELKIILPKCG 146
             +  GS L ++   CG
Sbjct: 127 YNIRSGSTLHMVTRLCG 141

[Close]

BLAST of MC10g_new0195 vs. ExPASy TrEMBL
Match: A0A5D3BMH5 (Polyubiquitin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1112G00560 PE=4 SV=1)

HSP 1 Score: 126 bits (317), Expect = 2.32e-34
Identity = 64/132 (48.48%), Postives = 92/132 (69.70%), Query Frame = 0


Query: 15  SIGAVIKAVQALPDMDEDFILDACDFLQNPQN-GEIFMALAPKLRKRWLLRNLPRPGQMK 74
           SI  VIKAV+ALPDMDED ILDA DFL + +N  ++F+++  KLR++WL++ L    +M+
Sbjct: 15  SIETVIKAVEALPDMDEDLILDAFDFLMDNENKAKVFISMDAKLRRKWLIKKLRPQPEMQ 74

Query: 75  INFQTVCGKRFGLEVLASDTVEVVKAKIEGKEGYPPEKQRLFYGGVQLEGATTLAECRVT 134
           I  +T+ G++  L+VL +DT+  VKAKIE KEGYP ++QRL + G +L+   TL  C + 
Sbjct: 75  IFVKTLEGRKMSLDVLTTDTINDVKAKIEAKEGYPQQQQRLVFNGWKLDDDRTLGSCGLW 134

Query: 135 PGSELKIILPKC 145
            GS L +IL  C
Sbjct: 135 SGSSLHLILCVC 146

[Close]

BLAST of MC10g_new0195 vs. ExPASy TrEMBL
Match: A0A1S3CKU5 (polyubiquitin-like OS=Cucumis melo OX=3656 GN=LOC103501609 PE=4 SV=1)

HSP 1 Score: 126 bits (317), Expect = 2.32e-34
Identity = 64/132 (48.48%), Postives = 92/132 (69.70%), Query Frame = 0


Query: 15  SIGAVIKAVQALPDMDEDFILDACDFLQNPQN-GEIFMALAPKLRKRWLLRNLPRPGQMK 74
           SI  VIKAV+ALPDMDED ILDA DFL + +N  ++F+++  KLR++WL++ L    +M+
Sbjct: 15  SIETVIKAVEALPDMDEDLILDAFDFLMDNENKAKVFISMDAKLRRKWLIKKLRPQPEMQ 74

Query: 75  INFQTVCGKRFGLEVLASDTVEVVKAKIEGKEGYPPEKQRLFYGGVQLEGATTLAECRVT 134
           I  +T+ G++  L+VL +DT+  VKAKIE KEGYP ++QRL + G +L+   TL  C + 
Sbjct: 75  IFVKTLEGRKMSLDVLTTDTINDVKAKIEAKEGYPQQQQRLVFNGWKLDDDRTLGSCGLW 134

Query: 135 PGSELKIILPKC 145
            GS L +IL  C
Sbjct: 135 SGSSLHLILCVC 146

[Close]

BLAST of MC10g_new0195 vs. TAIR 10
Match: AT3G09790.1 (ubiquitin 8 )

HSP 1 Score: 75.9 bits (185), Expect = 3.1e-14
Identity = 38/78 (48.72%), Postives = 50/78 (64.10%), Query Frame = 0


Query: 70  GQMKINFQTVCGKRFGLEVLASDTVEVVKAKIEGKEGYPPEKQRLFYGGVQLEGATTLAE 129
           G M+I  QT+ GK   LEV +SDT++ VKAKI+ KEG  P +QRL + G QLE   TLA+
Sbjct: 77  GGMQIFVQTLTGKTITLEVKSSDTIDNVKAKIQDKEGILPRQQRLIFAGKQLEDGRTLAD 136

Query: 130 CRVTPGSELKIILPKCGG 148
             +   S L ++L  CGG
Sbjct: 137 YNIQKESTLHLVLRLCGG 154

[Close]

BLAST of MC10g_new0195 vs. TAIR 10
Match: AT5G37640.1 (ubiquitin 9 )

HSP 1 Score: 75.1 bits (183), Expect = 5.3e-14
Identity = 37/78 (47.44%), Postives = 50/78 (64.10%), Query Frame = 0


Query: 70  GQMKINFQTVCGKRFGLEVLASDTVEVVKAKIEGKEGYPPEKQRLFYGGVQLEGATTLAE 129
           G M+I  +T+  K   LEV +SDT + VKAKI+ KEG PP++QRL + G QLE   TLA+
Sbjct: 153 GGMQIFVRTLTRKTIALEVESSDTTDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD 212

Query: 130 CRVTPGSELKIILPKCGG 148
             +   S L ++L  CGG
Sbjct: 213 YNIQKESTLHLVLRLCGG 230

[Close]

BLAST of MC10g_new0195 vs. TAIR 10
Match: AT4G05320.2 (polyubiquitin 10 )

HSP 1 Score: 73.9 bits (180), Expect = 1.2e-13
Identity = 37/78 (47.44%), Postives = 51/78 (65.38%), Query Frame = 0


Query: 70  GQMKINFQTVCGKRFGLEVLASDTVEVVKAKIEGKEGYPPEKQRLFYGGVQLEGATTLAE 129
           G M+I  +T+ GK   LEV +SDT++ VKAKI+ KEG PP++QRL + G QLE   TLA+
Sbjct: 75  GGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD 134

Query: 130 CRVTPGSELKIILPKCGG 148
             +   S L ++L   GG
Sbjct: 135 YNIQKESTLHLVLRLRGG 152

[Close]

BLAST of MC10g_new0195 vs. TAIR 10
Match: AT4G02890.1 (Ubiquitin family protein )

HSP 1 Score: 73.9 bits (180), Expect = 1.2e-13
Identity = 37/78 (47.44%), Postives = 51/78 (65.38%), Query Frame = 0


Query: 70  GQMKINFQTVCGKRFGLEVLASDTVEVVKAKIEGKEGYPPEKQRLFYGGVQLEGATTLAE 129
           G M+I  +T+ GK   LEV +SDT++ VKAKI+ KEG PP++QRL + G QLE   TLA+
Sbjct: 75  GGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD 134

Query: 130 CRVTPGSELKIILPKCGG 148
             +   S L ++L   GG
Sbjct: 135 YNIQKESTLHLVLRLRGG 152

[Close]

BLAST of MC10g_new0195 vs. TAIR 10
Match: AT4G05050.1 (ubiquitin 11 )

HSP 1 Score: 73.9 bits (180), Expect = 1.2e-13
Identity = 37/78 (47.44%), Postives = 51/78 (65.38%), Query Frame = 0


Query: 70  GQMKINFQTVCGKRFGLEVLASDTVEVVKAKIEGKEGYPPEKQRLFYGGVQLEGATTLAE 129
           G M+I  +T+ GK   LEV +SDT++ VKAKI+ KEG PP++QRL + G QLE   TLA+
Sbjct: 75  GGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD 134

Query: 130 CRVTPGSELKIILPKCGG 148
             +   S L ++L   GG
Sbjct: 135 YNIQKESTLHLVLRLRGG 152

The following BLAST results are available for this feature:

BLAST of MC10g_new0195 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0CH27	4.4e-13	48.72	Ubiquitin-60S ribosomal protein L40 OS=Trypanosoma cruzi OX=5693 PE=2 SV=1	[more]
Q39256	4.4e-13	48.72	Polyubiquitin 8 OS=Arabidopsis thaliana OX=3702 GN=UBQ8 PE=3 SV=1	[more]
P21899	7.5e-13	50.00	Ubiquitin-60S ribosomal protein L40 OS=Trypanosoma brucei brucei OX=5702 PE=1 SV...	[more]
P0CG71	7.5e-13	48.72	Polyubiquitin-A OS=Caenorhabditis elegans OX=6239 GN=ubq-1 PE=3 SV=1	[more]
P59669	7.5e-13	48.72	Polyubiquitin OS=Geodia cydonium OX=6047 PE=2 SV=2	[more]

BLAST of MC10g_new0195 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022154969.1	7.81e-103	100.00	ubiquitin-like [Momordica charantia]	[more]
XP_022154970.1	2.65e-59	69.34	ubiquitin-like isoform X1 [Momordica charantia] >XP_022154971.1 ubiquitin-like i...	[more]
XP_022154972.1	1.94e-56	68.61	ubiquitin-like isoform X2 [Momordica charantia]	[more]
XP_008463442.1	4.79e-34	48.48	PREDICTED: polyubiquitin-like [Cucumis melo] >KAA0025478.1 polyubiquitin-like [C...	[more]
KAA0025481.1	3.69e-23	41.09	polyubiquitin-like [Cucumis melo var. makuwa] >TYK00384.1 polyubiquitin-like [Cu...	[more]

BLAST of MC10g_new0195 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DNT8	3.78e-103	100.00	ubiquitin-like OS=Momordica charantia OX=3673 GN=LOC111022114 PE=4 SV=1	[more]
A0A6J1DL46	1.28e-59	69.34	ubiquitin-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111022115 PE=4 SV...	[more]
A0A6J1DN50	9.39e-57	68.61	ubiquitin-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111022115 PE=4 SV...	[more]
A0A5D3BMH5	2.32e-34	48.48	Polyubiquitin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1112G...	[more]
A0A1S3CKU5	2.32e-34	48.48	polyubiquitin-like OS=Cucumis melo OX=3656 GN=LOC103501609 PE=4 SV=1	[more]

BLAST of MC10g_new0195 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G09790.1	3.1e-14	48.72	ubiquitin 8	[more]
AT5G37640.1	5.3e-14	47.44	ubiquitin 9	[more]
AT4G05320.2	1.2e-13	47.44	polyubiquitin 10	[more]
AT4G02890.1	1.2e-13	47.44	Ubiquitin family protein	[more]
AT4G05050.1	1.2e-13	47.44	ubiquitin 11	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019956	Ubiquitin domain	PRINTS	PR00348	UBIQUITIN	coord: 124..145 score: 23.81 coord: 103..123 score: 55.54 coord: 82..102 score: 54.36
IPR000626	Ubiquitin-like domain	SMART	SM00213	ubq_7	coord: 72..143 e-value: 2.5E-9 score: 47.0
IPR000626	Ubiquitin-like domain	PFAM	PF00240	ubiquitin	coord: 74..141 e-value: 4.5E-17 score: 61.6
IPR000626	Ubiquitin-like domain	PROSITE	PS50053	UBIQUITIN_2	coord: 72..147 score: 19.477304
None	No IPR available	GENE3D	3.10.20.90		coord: 66..148 e-value: 2.9E-22 score: 80.4
None	No IPR available	PANTHER	PTHR10666	UBIQUITIN	coord: 45..147
None	No IPR available	PANTHER	PTHR10666:SF291	SUBFAMILY NOT NAMED	coord: 45..147
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 61..147

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC10g_new0195.1	MC10g_new0195.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding