MC10g_new0150 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC10g_new0150
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionRetrotrans_gag domain-containing protein
LocationMC10: 6792427 .. 6794160 (-)
RNA-Seq ExpressionMC10g_new0150
SyntenyMC10g_new0150
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAAAGTCGCATGTCACGACCTAGAGCAGTTACAGGCTACTGCTTTTGAAAGCAAACGTACGTCGCCATTTCCAAAAGAGCAATAACCAGTGACCAAAACCCTAATCGTTCTCCAAGCGACGATATTCCTGGCCGTACGAATTTCTCTGAATCTTCTTCTTCTTCCATTTTCTTTTTCTCTTTATCGCTTTTAATCGTCTTTACAATCATGATCTTCCTCCCGGGTAATGTATGTAGTAGTAGCATATTCTTTGATTAGGGTTTGGATTTTAAGCATTCATGGCATGCCTCTTCTTTGCTACTCATCATCATCGTCTTAAGTTGCTGTTTTCTTTAATCTCTCTGGATGGAAATCGGAAATGTGATGTTCTGGTGACGTTCATTGTTTGATTTTGTCAAACTGTGGAGCCAGTCGGTTTAATGACTCAGTGACTGACGATCGTTTTGGTTCCGAACTCGGAGTTGCTTATGAGGTGTGGATGTTCGTCTTTTTCTGATTATCCCATCTATGTACTGTTTATATTAATCGAAACAGAGGTTGAGAAGTTATTTTATGTTTTGTACATCTGCTTTTAGCTTTCTTGGGTTCCCTTGTGGTTTTTGATGCATGATTTTTAAGGAAGATGTTCATCTGTGGAGTCCTTTTATTTCTCTGATTTGAAGTCTAGGAAAGAAAAATGGCTGAATCGAAAGTGAAGACCATTAAAAACCCCCCAGTTGCAATCAAGCTGGAAGCTGCAGAACGAGGAGATGTGGCTGAATCAAAAGTAAAAACCAACAAAAACCCCCCAATTGCAATCAAGGAAGCTGCAGATCAAGGAGATGTTTACAACAACATTTCCAATTTGGTTACCGAAATGAGGATTGTTGCGAATAGACAGATTGATATGGAGCATAGGAGCAAAATTAATGACTTCTTTGTCTGTGAACCTCCTTGTTTTGGTTAGGAAACCGATCCTTACGCTGCTAAATACTGGATTTTGAAGCTGGAAACTATCTTTGATTGCATAGATTGTTCAGATGAGCAGAGGGTTTCTTTTGCTGTCCTGAAGCTAAATGATTCTGCACTCTCTTGGTGGATAGTGGCAGAAAGACACTTGAAAGATGAAGTTACAGTGACATGGGAGAAGTTTAAGGAATTATTCTTTATGAGGTACTTCCCACGATGGATGCAACACCAGAAGTATGCCGAACTCTGTAGTCTGGAACAGGGAGATAGAACCGTAGCAGAGTACGACGTAGAGTTCATCAAGTTGTGTTCTCTTGTCTACGATTTCATTGGTAGTGAGGCTTGGGAGACTTCCCTGCATGATATTAGGATACAGATTTGCTTATTACGTGACACCACCTACCCCCAGGTGAGGGACATGGCGTTAAATCTGGAACGCCGCCTCAACGCTCAAGAGGATCAAGATTAAAACTATTGATTGAAGTAGAATGACAGCAGAGGGGAAGTTGGAGTTGGGGATCGATCACCTTCATCACCTTTCAATGGTGATCTTTTTGAAATGTGGTATGGTTCTGATTGCAAATAGTTTAGTTTATAGTTTCATAGGTTAGGCTATGAAGTTCATGATAGTTTCTTGTTTTTTCACCTCCAAAAAACAGGGTTCCCCACTCCCCATCTGGTCTGGCAATGACTGCCTTATACTGTTGTTTTTGTTTGTTGGCTTTTGTTAGGTGAAGTCTTTAGCATCCACCTGCTTTAAAAGCTAATGCTGCATTGTCTATTG

mRNA sequence

ATGGCTGAATCGAAAGTGAAGACCATTAAAAACCCCCCAGTTGCAATCAAGCTGGAAGCTGCAGAACGAGGAGATGTGGCTGAATCAAAAGTAAAAACCAACAAAAACCCCCCAATTGCAATCAAGGAAGCTGCAGATCAAGGAGATGTTTACAACAACATTTCCAATTTGGTTACCGAAATGAGGATTGTTGCGAATAGACAGATTGATATGGAGCATAGGAGCAAAATTAATGACTTCTTTGTCTGTGAACCTCCTTGTTTTGTGGCAGAAAGACACTTGAAAGATGAAGTTACAGTGACATGGGAGAAGTTTAAGGAATTATTCTTTATGAGGTACTTCCCACGATGGATGCAACACCAGAAGTATGCCGAACTCTGTAGTCTGGAACAGGGAGATAGAACCGTAGCAGAGTACGACGTAGAGTTCATCAAGTTGTGTTCTCTTGTCTACGATTTCATTGGTAGTGAGGCTTGGGAGACTTCCCTGCATGATATTAGGATACAGATTTGCTTATTACGTGACACCACCTACCCCCAGGTGAGGGACATGGCGTTAAATCTGGAACGCCGCCTCAACGCTCAAGAGGATCAAGATTAA

Coding sequence (CDS)

ATGGCTGAATCGAAAGTGAAGACCATTAAAAACCCCCCAGTTGCAATCAAGCTGGAAGCTGCAGAACGAGGAGATGTGGCTGAATCAAAAGTAAAAACCAACAAAAACCCCCCAATTGCAATCAAGGAAGCTGCAGATCAAGGAGATGTTTACAACAACATTTCCAATTTGGTTACCGAAATGAGGATTGTTGCGAATAGACAGATTGATATGGAGCATAGGAGCAAAATTAATGACTTCTTTGTCTGTGAACCTCCTTGTTTTGTGGCAGAAAGACACTTGAAAGATGAAGTTACAGTGACATGGGAGAAGTTTAAGGAATTATTCTTTATGAGGTACTTCCCACGATGGATGCAACACCAGAAGTATGCCGAACTCTGTAGTCTGGAACAGGGAGATAGAACCGTAGCAGAGTACGACGTAGAGTTCATCAAGTTGTGTTCTCTTGTCTACGATTTCATTGGTAGTGAGGCTTGGGAGACTTCCCTGCATGATATTAGGATACAGATTTGCTTATTACGTGACACCACCTACCCCCAGGTGAGGGACATGGCGTTAAATCTGGAACGCCGCCTCAACGCTCAAGAGGATCAAGATTAA

Protein sequence

MAESKVKTIKNPPVAIKLEAAERGDVAESKVKTNKNPPIAIKEAADQGDVYNNISNLVTEMRIVANRQIDMEHRSKINDFFVCEPPCFVAERHLKDEVTVTWEKFKELFFMRYFPRWMQHQKYAELCSLEQGDRTVAEYDVEFIKLCSLVYDFIGSEAWETSLHDIRIQICLLRDTTYPQVRDMALNLERRLNAQEDQD
Homology
BLAST of MC10g_new0150 vs. NCBI nr
Match: XP_022136421.1 (uncharacterized protein LOC111008132 [Momordica charantia] >XP_022136422.1 uncharacterized protein LOC111008132 [Momordica charantia] >XP_022136423.1 uncharacterized protein LOC111008132 [Momordica charantia] >XP_022136424.1 uncharacterized protein LOC111008132 [Momordica charantia])

HSP 1 Score: 383 bits (983), Expect = 4.64e-133
Identity = 199/246 (80.89%), Postives = 199/246 (80.89%), Query Frame = 0

Query: 1   MAESKVKTIKNPPVAIKLEAAERGDVAESKVKTNKNPPIAIKEAADQGDVYNNISNLVTE 60
           MAESKVKTIKNPPVAIKLEAAERGDVAESKVKTNKNPPIAIKEAADQGDVYNNISNLVTE
Sbjct: 1   MAESKVKTIKNPPVAIKLEAAERGDVAESKVKTNKNPPIAIKEAADQGDVYNNISNLVTE 60

Query: 61  MRIVANRQIDMEHRSKINDFFVCEPPCF-------------------------------- 120
           MRIVANRQIDMEHRSKINDFFVCEPPCF                                
Sbjct: 61  MRIVANRQIDMEHRSKINDFFVCEPPCFGQETDPYAAKYWILKLETIFDCIDCSDEQRVS 120

Query: 121 ---------------VAERHLKDEVTVTWEKFKELFFMRYFPRWMQHQKYAELCSLEQGD 180
                          VAERHLKDEVTVTWEKFKELFFMRYFPRWMQHQKYAELCSLEQGD
Sbjct: 121 FAVLKLNDSALSWWIVAERHLKDEVTVTWEKFKELFFMRYFPRWMQHQKYAELCSLEQGD 180

Query: 181 RTVAEYDVEFIKLCSLVYDFIGSEAWETSLHDIRIQICLLRDTTYPQVRDMALNLERRLN 199
           RTVAEYDVEFIKLCSLVYDFIGSEAWETSLHDIRIQICLLRDTTYPQVRDMALNLERRLN
Sbjct: 181 RTVAEYDVEFIKLCSLVYDFIGSEAWETSLHDIRIQICLLRDTTYPQVRDMALNLERRLN 240

BLAST of MC10g_new0150 vs. NCBI nr
Match: TYK16471.1 (uncharacterized protein E5676_scaffold21G002740 [Cucumis melo var. makuwa])

HSP 1 Score: 154 bits (388), Expect = 5.62e-43
Identity = 94/219 (42.92%), Postives = 122/219 (55.71%), Query Frame = 0

Query: 29  SKVKTNKNPPIAIKEAADQGDVYNNISNLVTEMRIVANRQIDMEHRSKINDFFVCEPPCF 88
           S VKTN N  +A + + + G+VY+ I NLV+E+RI+A +Q D E  +K + FF CEPP F
Sbjct: 9   STVKTN-NHLVAAEPSVNLGNVYDEICNLVSEVRIIAAKQTDEERSNKSSMFFACEPPSF 68

Query: 89  -------VAER-------------------------HLKDE----------------VTV 148
                  VA+R                          LKD                 VTV
Sbjct: 69  GEDTDPLVAQRWILILENIFDLIRCSDKQKVSFASLRLKDAAFSWWMVLHTDLEADGVTV 128

Query: 149 TWEKFKELFFMRYFPRWMQHQKYAELCSLEQGDRTVAEYDVEFIKLCSLVYDFIGSEAWE 193
           TWEKFKELF  RY PRW++ +K+ ELC+LEQGD TVAEYD +FIKL SL ++FI  EAWE
Sbjct: 129 TWEKFKELFEKRYLPRWLKLEKFRELCNLEQGDGTVAEYDEQFIKLASLAHEFIPDEAWE 188

BLAST of MC10g_new0150 vs. NCBI nr
Match: KAA0045000.1 (uncharacterized protein E6C27_scaffold74G003100 [Cucumis melo var. makuwa])

HSP 1 Score: 151 bits (382), Expect = 4.50e-42
Identity = 93/219 (42.47%), Postives = 121/219 (55.25%), Query Frame = 0

Query: 29  SKVKTNKNPPIAIKEAADQGDVYNNISNLVTEMRIVANRQIDMEHRSKINDFFVCEPPCF 88
           S VKTN N  +A + + + G+VY+ I NLV+E+RI+A +Q D E  +K + FF CEPP F
Sbjct: 9   STVKTN-NHLVAAEPSVNLGNVYDEICNLVSEVRIIAAKQTDEERSNKSSMFFACEPPSF 68

Query: 89  -------VAER-------------------------HLKDE----------------VTV 148
                  VA+R                          LKD                 VTV
Sbjct: 69  GEDTDPLVAQRWILILENIFDLIRCSDKQKVSFASLRLKDAAFSWWMVLHTDLEADGVTV 128

Query: 149 TWEKFKELFFMRYFPRWMQHQKYAELCSLEQGDRTVAEYDVEFIKLCSLVYDFIGSEAWE 193
           TWEK KELF  RY PRW++ +K+ ELC+LEQGD TVAEYD +FIKL SL ++FI  EAWE
Sbjct: 129 TWEKLKELFEKRYLPRWLKLEKFRELCNLEQGDGTVAEYDEQFIKLASLAHEFIPDEAWE 188

BLAST of MC10g_new0150 vs. NCBI nr
Match: XP_004147729.1 (uncharacterized protein LOC101209793 [Cucumis sativus] >KGN53481.1 hypothetical protein Csa_015100 [Cucumis sativus])

HSP 1 Score: 149 bits (377), Expect = 3.27e-41
Identity = 91/219 (41.55%), Postives = 122/219 (55.71%), Query Frame = 0

Query: 29  SKVKTNKNPPIAIKEAADQGDVYNNISNLVTEMRIVANRQIDMEHRSKINDFFVCEPPCF 88
           S VKTN    +A + + + G+VY+ I NLV+EMRI+A +Q D E  +K + FF CEPP F
Sbjct: 18  STVKTNDRL-VAAEPSVNLGNVYDEICNLVSEMRIIAAKQTDEERTNKSSMFFACEPPSF 77

Query: 89  -------VAER-------------------------HLKDE----------------VTV 148
                  VA+R                          LKD                 VTV
Sbjct: 78  GEDTDPLVAQRWILILENIFDLIRCSDEHKVSFACLRLKDAAFSWWMVMHTDLEADGVTV 137

Query: 149 TWEKFKELFFMRYFPRWMQHQKYAELCSLEQGDRTVAEYDVEFIKLCSLVYDFIGSEAWE 193
           TW+KFKELF  RY P W++ +K+ ELC+LEQGD TVAEYD +FIKL SL ++FI  EAWE
Sbjct: 138 TWQKFKELFEKRYLPSWLKLEKFRELCNLEQGDGTVAEYDEQFIKLASLAHEFIPDEAWE 197

BLAST of MC10g_new0150 vs. NCBI nr
Match: KAG6577099.1 (hypothetical protein SDJN03_24673, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 126 bits (316), Expect = 3.06e-32
Identity = 81/221 (36.65%), Postives = 114/221 (51.58%), Query Frame = 0

Query: 31  VKTNKNPPIAIKEAADQGDVYNNISNLVTE-MRIVANRQIDMEHRSKINDFFVCEPPCF- 90
           +KTN+ P IA + A + GDV + I +L+ E +R+VA RQ + EH SK N FFVC+PP F 
Sbjct: 1   MKTNR-PLIAAEPAMNLGDVCDEICSLIREGLRVVAARQTNEEHNSKFNQFFVCQPPWFG 60

Query: 91  ----------------------------------------------VAERHLK-DEVTVT 150
                                                         V++R+L  D   VT
Sbjct: 61  EDTGPLVAKRWVLGLENIFDCIGCSDEQKVSFACLRLKDSALSWWIVSKRYLNADGAAVT 120

Query: 151 WEKFKELFFMRYFPRWMQHQKYAELCSLEQGDRTVAEYDVEFIKLCSLVYDFIGSEAWET 196
           WEKFK+LF+ RYFP W++H+K+ EL  L QG+RTV EYD EFI L SLV +    ++ E 
Sbjct: 121 WEKFKDLFYKRYFPSWLKHEKHRELWKLGQGNRTVIEYDEEFITLSSLVSELNPDDSLEA 180

BLAST of MC10g_new0150 vs. ExPASy TrEMBL
Match: A0A6J1C495 (uncharacterized protein LOC111008132 OS=Momordica charantia OX=3673 GN=LOC111008132 PE=4 SV=1)

HSP 1 Score: 383 bits (983), Expect = 2.25e-133
Identity = 199/246 (80.89%), Postives = 199/246 (80.89%), Query Frame = 0

Query: 1   MAESKVKTIKNPPVAIKLEAAERGDVAESKVKTNKNPPIAIKEAADQGDVYNNISNLVTE 60
           MAESKVKTIKNPPVAIKLEAAERGDVAESKVKTNKNPPIAIKEAADQGDVYNNISNLVTE
Sbjct: 1   MAESKVKTIKNPPVAIKLEAAERGDVAESKVKTNKNPPIAIKEAADQGDVYNNISNLVTE 60

Query: 61  MRIVANRQIDMEHRSKINDFFVCEPPCF-------------------------------- 120
           MRIVANRQIDMEHRSKINDFFVCEPPCF                                
Sbjct: 61  MRIVANRQIDMEHRSKINDFFVCEPPCFGQETDPYAAKYWILKLETIFDCIDCSDEQRVS 120

Query: 121 ---------------VAERHLKDEVTVTWEKFKELFFMRYFPRWMQHQKYAELCSLEQGD 180
                          VAERHLKDEVTVTWEKFKELFFMRYFPRWMQHQKYAELCSLEQGD
Sbjct: 121 FAVLKLNDSALSWWIVAERHLKDEVTVTWEKFKELFFMRYFPRWMQHQKYAELCSLEQGD 180

Query: 181 RTVAEYDVEFIKLCSLVYDFIGSEAWETSLHDIRIQICLLRDTTYPQVRDMALNLERRLN 199
           RTVAEYDVEFIKLCSLVYDFIGSEAWETSLHDIRIQICLLRDTTYPQVRDMALNLERRLN
Sbjct: 181 RTVAEYDVEFIKLCSLVYDFIGSEAWETSLHDIRIQICLLRDTTYPQVRDMALNLERRLN 240

BLAST of MC10g_new0150 vs. ExPASy TrEMBL
Match: A0A5D3CX20 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G002740 PE=4 SV=1)

HSP 1 Score: 154 bits (388), Expect = 2.72e-43
Identity = 94/219 (42.92%), Postives = 122/219 (55.71%), Query Frame = 0

Query: 29  SKVKTNKNPPIAIKEAADQGDVYNNISNLVTEMRIVANRQIDMEHRSKINDFFVCEPPCF 88
           S VKTN N  +A + + + G+VY+ I NLV+E+RI+A +Q D E  +K + FF CEPP F
Sbjct: 9   STVKTN-NHLVAAEPSVNLGNVYDEICNLVSEVRIIAAKQTDEERSNKSSMFFACEPPSF 68

Query: 89  -------VAER-------------------------HLKDE----------------VTV 148
                  VA+R                          LKD                 VTV
Sbjct: 69  GEDTDPLVAQRWILILENIFDLIRCSDKQKVSFASLRLKDAAFSWWMVLHTDLEADGVTV 128

Query: 149 TWEKFKELFFMRYFPRWMQHQKYAELCSLEQGDRTVAEYDVEFIKLCSLVYDFIGSEAWE 193
           TWEKFKELF  RY PRW++ +K+ ELC+LEQGD TVAEYD +FIKL SL ++FI  EAWE
Sbjct: 129 TWEKFKELFEKRYLPRWLKLEKFRELCNLEQGDGTVAEYDEQFIKLASLAHEFIPDEAWE 188

BLAST of MC10g_new0150 vs. ExPASy TrEMBL
Match: A0A5A7TP79 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G003100 PE=4 SV=1)

HSP 1 Score: 151 bits (382), Expect = 2.18e-42
Identity = 93/219 (42.47%), Postives = 121/219 (55.25%), Query Frame = 0

Query: 29  SKVKTNKNPPIAIKEAADQGDVYNNISNLVTEMRIVANRQIDMEHRSKINDFFVCEPPCF 88
           S VKTN N  +A + + + G+VY+ I NLV+E+RI+A +Q D E  +K + FF CEPP F
Sbjct: 9   STVKTN-NHLVAAEPSVNLGNVYDEICNLVSEVRIIAAKQTDEERSNKSSMFFACEPPSF 68

Query: 89  -------VAER-------------------------HLKDE----------------VTV 148
                  VA+R                          LKD                 VTV
Sbjct: 69  GEDTDPLVAQRWILILENIFDLIRCSDKQKVSFASLRLKDAAFSWWMVLHTDLEADGVTV 128

Query: 149 TWEKFKELFFMRYFPRWMQHQKYAELCSLEQGDRTVAEYDVEFIKLCSLVYDFIGSEAWE 193
           TWEK KELF  RY PRW++ +K+ ELC+LEQGD TVAEYD +FIKL SL ++FI  EAWE
Sbjct: 129 TWEKLKELFEKRYLPRWLKLEKFRELCNLEQGDGTVAEYDEQFIKLASLAHEFIPDEAWE 188

BLAST of MC10g_new0150 vs. ExPASy TrEMBL
Match: A0A0A0L042 (Retrotrans_gag domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G056700 PE=4 SV=1)

HSP 1 Score: 149 bits (377), Expect = 1.58e-41
Identity = 91/219 (41.55%), Postives = 122/219 (55.71%), Query Frame = 0

Query: 29  SKVKTNKNPPIAIKEAADQGDVYNNISNLVTEMRIVANRQIDMEHRSKINDFFVCEPPCF 88
           S VKTN    +A + + + G+VY+ I NLV+EMRI+A +Q D E  +K + FF CEPP F
Sbjct: 18  STVKTNDRL-VAAEPSVNLGNVYDEICNLVSEMRIIAAKQTDEERTNKSSMFFACEPPSF 77

Query: 89  -------VAER-------------------------HLKDE----------------VTV 148
                  VA+R                          LKD                 VTV
Sbjct: 78  GEDTDPLVAQRWILILENIFDLIRCSDEHKVSFACLRLKDAAFSWWMVMHTDLEADGVTV 137

Query: 149 TWEKFKELFFMRYFPRWMQHQKYAELCSLEQGDRTVAEYDVEFIKLCSLVYDFIGSEAWE 193
           TW+KFKELF  RY P W++ +K+ ELC+LEQGD TVAEYD +FIKL SL ++FI  EAWE
Sbjct: 138 TWQKFKELFEKRYLPSWLKLEKFRELCNLEQGDGTVAEYDEQFIKLASLAHEFIPDEAWE 197

BLAST of MC10g_new0150 vs. ExPASy TrEMBL
Match: A0A6J1EYB6 (uncharacterized protein LOC111437567 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111437567 PE=4 SV=1)

HSP 1 Score: 126 bits (316), Expect = 1.48e-32
Identity = 81/221 (36.65%), Postives = 114/221 (51.58%), Query Frame = 0

Query: 31  VKTNKNPPIAIKEAADQGDVYNNISNLVTE-MRIVANRQIDMEHRSKINDFFVCEPPCF- 90
           +KTN+ P IA + A + GDV + I +L+ E +R+VA RQ + EH SK N FFVC+PP F 
Sbjct: 1   MKTNR-PLIAAEPAMNLGDVCDEICSLIREGLRVVAARQTNEEHNSKFNQFFVCQPPWFG 60

Query: 91  ----------------------------------------------VAERHLK-DEVTVT 150
                                                         V++R+L  D   VT
Sbjct: 61  EDTDPLVAKRWVLGLENIFDCIGCSDEQKVSFACLRLKDSALSWWIVSKRYLNADGAAVT 120

Query: 151 WEKFKELFFMRYFPRWMQHQKYAELCSLEQGDRTVAEYDVEFIKLCSLVYDFIGSEAWET 196
           WEKFK+LF+ RYFP W++H+K+ EL  L QG+RTV EYD EFI L SLV +    ++ E 
Sbjct: 121 WEKFKDLFYKRYFPSWLKHEKHRELWKLGQGNRTVIEYDEEFITLSSLVSELNPDDSLEA 180

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_022136421.14.64e-13380.89uncharacterized protein LOC111008132 [Momordica charantia] >XP_022136422.1 uncha... [more]
TYK16471.15.62e-4342.92uncharacterized protein E5676_scaffold21G002740 [Cucumis melo var. makuwa][more]
KAA0045000.14.50e-4242.47uncharacterized protein E6C27_scaffold74G003100 [Cucumis melo var. makuwa][more]
XP_004147729.13.27e-4141.55uncharacterized protein LOC101209793 [Cucumis sativus] >KGN53481.1 hypothetical ... [more]
KAG6577099.13.06e-3236.65hypothetical protein SDJN03_24673, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
A0A6J1C4952.25e-13380.89uncharacterized protein LOC111008132 OS=Momordica charantia OX=3673 GN=LOC111008... [more]
A0A5D3CX202.72e-4342.92Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ... [more]
A0A5A7TP792.18e-4242.47Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ... [more]
A0A0A0L0421.58e-4141.55Retrotrans_gag domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G056... [more]
A0A6J1EYB61.48e-3236.65uncharacterized protein LOC111437567 isoform X1 OS=Cucurbita moschata OX=3662 GN... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005162Retrotransposon gag domainPFAMPF03732Retrotrans_gagcoord: 96..149
e-value: 5.0E-6
score: 26.7

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC10g_new0150.1MC10g_new0150.1mRNA