MC10g1436 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC10g1436
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC10: 17670499 .. 17670858 (+)
RNA-Seq ExpressionMC10g1436
SyntenyMC10g1436
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AGCCTTGATCTTGAATCTGTACCTAGGAGCTCTGGGAATAACCTGGCTAGGTCCGAAGTGGAACTGACCTGGACTGTCGGTAAGAGGAGGCCCGTCGTCGTAAACGTAGCCTACGAGATGGCCGCAGGCAATGCACTTGATCTTGGTGCGCTTCCGCTGGATTCCCCAGTAATTGAGGGTCTCGAAGAATGGTCTGAGCTTGTCCTCCTTCTCGAGCCTGAACTTGGTGGAGTCGATCGACGAAAAGGAAAGAGTGCCCTTGTTTCCGGCCTCGAAGTAGAAATCCGGCGGGAAGAGATGACCGGAACTCAGATTCAGATCAGCTCCGCATTGTGTACAGCAGTAGATGGAAGCCATTGT

mRNA sequence

AGCCTTGATCTTGAATCTGTACCTAGGAGCTCTGGGAATAACCTGGCTAGGTCCGAAGTGGAACTGACCTGGACTGTCGGTAAGAGGAGGCCCGTCGTCGTAAACGTAGCCTACGAGATGGCCGCAGGCAATGCACTTGATCTTGGTGCGCTTCCGCTGGATTCCCCAGTAATTGAGGGTCTCGAAGAATGGTCTGAGCTTGTCCTCCTTCTCGAGCCTGAACTTGGTGGAGTCGATCGACGAAAAGGAAAGAGTGCCCTTGTTTCCGGCCTCGAAGTAGAAATCCGGCGGGAAGAGATGACCGGAACTCAGATTCAGATCAGCTCCGCATTGTGTACAGCAGTAGATGGAAGCCATTGT

Coding sequence (CDS)

AGCCTTGATCTTGAATCTGTACCTAGGAGCTCTGGGAATAACCTGGCTAGGTCCGAAGTGGAACTGACCTGGACTGTCGGTAAGAGGAGGCCCGTCGTCGTAAACGTAGCCTACGAGATGGCCGCAGGCAATGCACTTGATCTTGGTGCGCTTCCGCTGGATTCCCCAGTAATTGAGGGTCTCGAAGAATGGTCTGAGCTTGTCCTCCTTCTCGAGCCTGAACTTGGTGGAGTCGATCGACGAAAAGGAAAGAGTGCCCTTGTTTCCGGCCTCGAAGTAGAAATCCGGCGGGAAGAGATGACCGGAACTCAGATTCAGATCAGCTCCGCATTGTGTACAGCAGTAGATGGAAGCCATTGT

Protein sequence

SLDLESVPRSSGNNLARSEVELTWTVGKRRPVVVNVAYEMAAGNALDLGALPLDSPVIEGLEEWSELVLLLEPELGGVDRRKGKSALVSGLEVEIRREEMTGTQIQISSALCTAVDGSHC
Homology
BLAST of MC10g1436 vs. NCBI nr
Match: KAF5462937.1 (hypothetical protein F2P56_018900 [Juglans regia])

HSP 1 Score: 137 bits (346), Expect = 4.95e-39
Identity = 75/118 (63.56%), Postives = 89/118 (75.42%), Query Frame = 0

Query: 2   LDLESVPRSSGNNLARSEVELTWTVGKRRPVVVNVAYEMAAGNALDLGALPLDSPVIEGL 61
           LDLE +P SSG +LAR+ VELT  V +RR VVV+VA + AA  A DLG LPLD PVI+GL
Sbjct: 20  LDLEPIPGSSGYDLARTHVELTGAVCERRTVVVDVANKTAAAIAFDLGPLPLDPPVIDGL 79

Query: 62  EEWSELVLLLEPELGGVDRRKGKSALVSGLEVEIRREEMTGTQIQISSALCTAVDGSH 119
           EE S+LVLLLEPE G VD R+GK  LVSGLEVE+R EEM   ++++  AL  AVDGSH
Sbjct: 80  EEGSDLVLLLEPEFGVVDTREGKRTLVSGLEVEVRWEEMHCAKVEVGPALRAAVDGSH 137

BLAST of MC10g1436 vs. NCBI nr
Match: KAG4993660.1 (hypothetical protein JHK86_030487 [Glycine max])

HSP 1 Score: 115 bits (289), Expect = 2.70e-28
Identity = 61/104 (58.65%), Postives = 77/104 (74.04%), Query Frame = 0

Query: 16  ARSEVELTWTVGKRRPVVVNVAYEMAAGNALDLGALPLDSPVIEGLEEWSELVLLLEPEL 75
           AR+ V+LT T+GKR  +V++VA E   G ALDLG LPLDSPV++G EE ++LVLLLE EL
Sbjct: 217 ARTHVKLTGTIGKRWTIVIDVAKETVTGVALDLGPLPLDSPVVDGFEEGAKLVLLLELEL 276

Query: 76  GGVDRRKGKSALVSGLEVEIRREEMTGTQIQISSALCTAVDGSH 119
           GGV   +G  ALV+G EVE+ R  M+G +IQ+ SAL TAV G H
Sbjct: 277 GGVHGGEGDGALVAGFEVEVWRVGMSGVKIQVGSALRTAVHGGH 320

BLAST of MC10g1436 vs. NCBI nr
Match: CAN82016.1 (hypothetical protein VITISV_034433 [Vitis vinifera])

HSP 1 Score: 108 bits (271), Expect = 3.78e-28
Identity = 56/97 (57.73%), Postives = 74/97 (76.29%), Query Frame = 0

Query: 20  VELTWTVGKRRPVVVNVAYEMAAGNALDLGALPLDSPVIEGLEEWSELVLLLEPELGGVD 79
           +ELT TVG+RR ++V+VA E A   ALDLG LPLDSPVI+GLE+  +LVL LE EL GVD
Sbjct: 1   MELTGTVGERRTIIVDVANETATAIALDLGPLPLDSPVIQGLEKGPDLVLFLESELXGVD 60

Query: 80  RRKGKSALVSGLEVEIRREEMTGTQIQISSALCTAVD 116
             +G+ A V+G+EVE+R EE+ G ++++ SA  TAVD
Sbjct: 61  ACEGEGAFVAGVEVEVRWEEVGGVKVEVGSAFPTAVD 97

BLAST of MC10g1436 vs. NCBI nr
Match: KHN41865.1 (L-ascorbate peroxidase 3, peroxisomal [Glycine soja])

HSP 1 Score: 115 bits (288), Expect = 3.79e-28
Identity = 61/104 (58.65%), Postives = 77/104 (74.04%), Query Frame = 0

Query: 16  ARSEVELTWTVGKRRPVVVNVAYEMAAGNALDLGALPLDSPVIEGLEEWSELVLLLEPEL 75
           AR+ V+LT T+GKR  +V++VA E   G ALDLG LPLDSPV++G EE ++LVLLLE EL
Sbjct: 217 ARTHVKLTGTIGKRWTIVIDVAKETVTGVALDLGPLPLDSPVVDGFEEGAKLVLLLELEL 276

Query: 76  GGVDRRKGKSALVSGLEVEIRREEMTGTQIQISSALCTAVDGSH 119
           GGV   +G  ALV+G EVE+ R  M+G +IQ+ SAL TAV G H
Sbjct: 277 GGVRDGEGDGALVAGFEVEVWRVGMSGVKIQVGSALRTAVHGGH 320

BLAST of MC10g1436 vs. NCBI nr
Match: KAG5123654.1 (hypothetical protein JHK82_030391 [Glycine max])

HSP 1 Score: 115 bits (289), Expect = 3.81e-28
Identity = 61/103 (59.22%), Postives = 76/103 (73.79%), Query Frame = 0

Query: 17  RSEVELTWTVGKRRPVVVNVAYEMAAGNALDLGALPLDSPVIEGLEEWSELVLLLEPELG 76
           R+ V+LT T+GKR  +V++VA E   G ALDLG LPLDSPV++G EE ++LVLLLE ELG
Sbjct: 239 RTHVKLTGTIGKRWTIVIDVAKETVTGVALDLGPLPLDSPVVDGFEEGAKLVLLLELELG 298

Query: 77  GVDRRKGKSALVSGLEVEIRREEMTGTQIQISSALCTAVDGSH 119
           GV   +G  ALV+G EVE+ R  M+G QIQ+ SAL TAV G H
Sbjct: 299 GVHDGEGDGALVAGFEVEVWRVGMSGVQIQVGSALRTAVHGGH 341

BLAST of MC10g1436 vs. ExPASy TrEMBL
Match: A5CB28 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_034433 PE=4 SV=1)

HSP 1 Score: 108 bits (271), Expect = 1.83e-28
Identity = 56/97 (57.73%), Postives = 74/97 (76.29%), Query Frame = 0

Query: 20  VELTWTVGKRRPVVVNVAYEMAAGNALDLGALPLDSPVIEGLEEWSELVLLLEPELGGVD 79
           +ELT TVG+RR ++V+VA E A   ALDLG LPLDSPVI+GLE+  +LVL LE EL GVD
Sbjct: 1   MELTGTVGERRTIIVDVANETATAIALDLGPLPLDSPVIQGLEKGPDLVLFLESELXGVD 60

Query: 80  RRKGKSALVSGLEVEIRREEMTGTQIQISSALCTAVD 116
             +G+ A V+G+EVE+R EE+ G ++++ SA  TAVD
Sbjct: 61  ACEGEGAFVAGVEVEVRWEEVGGVKVEVGSAFPTAVD 97

BLAST of MC10g1436 vs. ExPASy TrEMBL
Match: A0A6A2WCL8 (Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00117012pilonHSYRG00019 PE=4 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 3.11e-22
Identity = 49/97 (50.52%), Postives = 70/97 (72.16%), Query Frame = 0

Query: 2   LDLESVPRSSGNNLARSEVELTWTVGKRRPVVVNVAYEMAAGNALDLGALPLDSPVIEGL 61
           L LE++P+ SG++LA  ++ LT T+ +RR +++N+ ++  A   LDLG++P+ SPVI GL
Sbjct: 14  LGLEAIPKGSGDHLAGPKMPLTETICERRAIIINMTHKFPATITLDLGSVPVGSPVINGL 73

Query: 62  EEWSELVLLLEPELGGVDRRKGKSALVSGLEVEIRRE 98
           EE  ELVL LE E+G +D  + K ALVS LEVEI RE
Sbjct: 74  EERPELVLFLEVEVGLIDHGERKGALVSRLEVEIWRE 110

BLAST of MC10g1436 vs. ExPASy TrEMBL
Match: A0A498HVY7 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_029681 PE=4 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 7.06e-16
Identity = 43/73 (58.90%), Postives = 53/73 (72.60%), Query Frame = 0

Query: 44  NALDLGALPLDSPVIEGLEEWSELVLLLEPELGGVDRRKGKSALVSGLEVEIRREEMTGT 103
           +ALDL   PLD PV+  LEE S+LVLL+EPELG VDRRK   +LVSGLE E+RR E+   
Sbjct: 165 HALDLRPRPLDPPVVSSLEERSDLVLLVEPELGCVDRRKRHRSLVSGLEEEVRRIEIRSG 224

Query: 104 QIQISSALCTAVD 116
           ++Q+ SAL   VD
Sbjct: 225 KVQVGSALRAGVD 237

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAF5462937.14.95e-3963.56hypothetical protein F2P56_018900 [Juglans regia][more]
KAG4993660.12.70e-2858.65hypothetical protein JHK86_030487 [Glycine max][more]
CAN82016.13.78e-2857.73hypothetical protein VITISV_034433 [Vitis vinifera][more]
KHN41865.13.79e-2858.65L-ascorbate peroxidase 3, peroxisomal [Glycine soja][more]
KAG5123654.13.81e-2859.22hypothetical protein JHK82_030391 [Glycine max][more]
Match NameE-valueIdentityDescription
A5CB281.83e-2857.73Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_034433 PE=4 SV=1[more]
A0A6A2WCL83.11e-2250.52Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00117012pilon... [more]
A0A498HVY77.06e-1658.90Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_029681 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC10g1436.1MC10g1436.1mRNA