MC10g1412 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC10g1412
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC10: 17487607 .. 17487987 (+)
RNA-Seq ExpressionMC10g1412
SyntenyMC10g1412
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TGGACGATGTCAAAGCACGTGGGAGCAAGAGAGATGAATGGAACATTGTTGTTGAGAGAAAATGAATTGAAGCTGAAAGAGAATTTATTCAAATGGTGGCCACAAAGCAAAGTTGAGAATGCGATAAAAAACATAAGAAAAGGATCCAAAATCATTCTATTTGATGTGAATGGAGACAGCCCCAAAGAAAAAACCATGAGGAGGATTTCTTCAGAAGACTTCACTATTGAGTGGGACATCAAAGGCAGAAATTATATCGTCGGGGATGAGATTTTCATGCGTTGGGATCGAGAGAAGGAGTGGTTATGTTACATGGTCGTCCCAAATTGTGCTATTAGAATGAATGTAGAAATGCCTGATGCTTCTTCGAGAACCTCTTCT

mRNA sequence

TGGACGATGTCAAAGCACGTGGGAGCAAGAGAGATGAATGGAACATTGTTGTTGAGAGAAAATGAATTGAAGCTGAAAGAGAATTTATTCAAATGGTGGCCACAAAGCAAAGTTGAGAATGCGATAAAAAACATAAGAAAAGGATCCAAAATCATTCTATTTGATGTGAATGGAGACAGCCCCAAAGAAAAAACCATGAGGAGGATTTCTTCAGAAGACTTCACTATTGAGTGGGACATCAAAGGCAGAAATTATATCGTCGGGGATGAGATTTTCATGCGTTGGGATCGAGAGAAGGAGTGGTTATGTTACATGGTCGTCCCAAATTGTGCTATTAGAATGAATGTAGAAATGCCTGATGCTTCTTCGAGAACCTCTTCT

Coding sequence (CDS)

TGGACGATGTCAAAGCACGTGGGAGCAAGAGAGATGAATGGAACATTGTTGTTGAGAGAAAATGAATTGAAGCTGAAAGAGAATTTATTCAAATGGTGGCCACAAAGCAAAGTTGAGAATGCGATAAAAAACATAAGAAAAGGATCCAAAATCATTCTATTTGATGTGAATGGAGACAGCCCCAAAGAAAAAACCATGAGGAGGATTTCTTCAGAAGACTTCACTATTGAGTGGGACATCAAAGGCAGAAATTATATCGTCGGGGATGAGATTTTCATGCGTTGGGATCGAGAGAAGGAGTGGTTATGTTACATGGTCGTCCCAAATTGTGCTATTAGAATGAATGTAGAAATGCCTGATGCTTCTTCGAGAACCTCTTCT

Protein sequence

WTMSKHVGAREMNGTLLLRENELKLKENLFKWWPQSKVENAIKNIRKGSKIILFDVNGDSPKEKTMRRISSEDFTIEWDIKGRNYIVGDEIFMRWDREKEWLCYMVVPNCAIRMNVEMPDASSRTSS
Homology
[Close]
BLAST of MC10g1412 vs. NCBI nr
Match: KAG6575830.1 (hypothetical protein SDJN03_26469, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 87.4 bits (215), Expect = 3.51e-19
Identity = 43/109 (39.45%), Postives = 64/109 (58.72%), Query Frame = 0 

Query: 1   WTMSKHVGAREMNGTLLLRENE--LKLKENLFKWWPQSKVENAIKNIRKGSKIILFDVNG 60
           WTM K +   +MNG L LRE++    ++ NLF WWP+SKV +  + +    +IIL+DVN 
Sbjct: 5   WTMIKKLEDADMNGLLQLREDDEDADIRANLFNWWPRSKVRDLKRVVGSEVRIILYDVNM 64

Query: 61  DSPKEKTMRRISSEDFTIEWDIKGRNYIVGDEIFMRWDREKEWLCYMVV 107
           D   + TMR +    + IEWDI+ + Y  GD++ M WD     L Y ++
Sbjct: 65  DQAIQTTMRWLGMARYHIEWDIQNKPYSSGDDMLMFWDLRYNRLAYKII 113

[Close]
BLAST of MC10g1412 vs. NCBI nr
Match: KAG6575832.1 (hypothetical protein SDJN03_26471, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 86.3 bits (212), Expect = 9.94e-19
Identity = 49/128 (38.28%), Postives = 70/128 (54.69%), Query Frame = 0 

Query: 1   WTMSKHVGAREMNGTLLLRENELK--LKENLFKWWPQSKVENAIKNIRKGSKIILFDVNG 60
           WTM K +   +MNG L LRE+++   +  NLF+WW +SKV +  K I   +KI LFD N 
Sbjct: 5   WTMIKKLQEADMNGLLQLREDDVDTDINTNLFRWWSRSKVRDLKKQIGNEAKITLFDENT 64

Query: 61  DSPKEKTMRRISSEDFTIEWDIKGRNYIVGDEIFMRWDREKEWLCYMVVPNCAIRMNVEM 120
           +     T+R + +  + IEWD+K + Y  G ++ M WD +   L Y V+         EM
Sbjct: 65  NEVMHTTIRWLGTPRYHIEWDVKNKPYASGQDMLMGWDLKYNRLAYKVLQIPF----PEM 124

Query: 121 PDASSRTS 126
            DA S TS
Sbjct: 125 SDAGSSTS 128

[Close]
BLAST of MC10g1412 vs. NCBI nr
Match: OWM79991.1 (hypothetical protein CDL15_Pgr006295 [Punica granatum] >PKI47341.1 hypothetical protein CRG98_032266 [Punica granatum])

HSP 1 Score: 56.2 bits (134), Expect = 9.70e-07
Identity = 34/109 (31.19%), Postives = 63/109 (57.80%), Query Frame = 0 

Query: 1   WTMSKHVGAREM-NGTLLLRENELKLKENLFKWWPQSKVENAIKNIRKGSKIILFDVNGD 60
           WTM K + + ++    L+L   E+ +  N+F++W + K+E A  N ++G+ I L  VNGD
Sbjct: 47  WTMWKKLESYDIFENNLVLDPREVDMN-NIFRYWSKGKIEQA--NTKEGAAIRLRHVNGD 106

Query: 61  SPKEKTMRRISSEDFTIEWDIKGRNYIVGDEIFMRWDREKEWLCYMVVP 108
           +   K + + ++  + IEW+I G+ + + D I M +D   + L + V+P
Sbjct: 107 TEATKLIMK-NNGIYYIEWNIGGKEFWIHDHILMYYDAVYDALVFNVLP 151

[Close]
BLAST of MC10g1412 vs. ExPASy TrEMBL
Match: A0A218X667 (Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr006295 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 4.70e-07
Identity = 34/109 (31.19%), Postives = 63/109 (57.80%), Query Frame = 0 

Query: 1   WTMSKHVGAREM-NGTLLLRENELKLKENLFKWWPQSKVENAIKNIRKGSKIILFDVNGD 60
           WTM K + + ++    L+L   E+ +  N+F++W + K+E A  N ++G+ I L  VNGD
Sbjct: 47  WTMWKKLESYDIFENNLVLDPREVDMN-NIFRYWSKGKIEQA--NTKEGAAIRLRHVNGD 106

Query: 61  SPKEKTMRRISSEDFTIEWDIKGRNYIVGDEIFMRWDREKEWLCYMVVP 108
           +   K + + ++  + IEW+I G+ + + D I M +D   + L + V+P
Sbjct: 107 TEATKLIMK-NNGIYYIEWNIGGKEFWIHDHILMYYDAVYDALVFNVLP 151

The following BLAST results are available for this feature:
BLAST of MC10g1412 vs.
Match NameE-valueIdentityDescription
BLAST of MC10g1412 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6575830.13.51e-1939.45hypothetical protein SDJN03_26469, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6575832.19.94e-1938.28hypothetical protein SDJN03_26471, partial [Cucurbita argyrosperma subsp. sorori... [more]
OWM79991.19.70e-0731.19hypothetical protein CDL15_Pgr006295 [Punica granatum] >PKI47341.1 hypothetical ... [more]
BLAST of MC10g1412 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A218X6674.70e-0731.19Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr006295 PE=4 SV=1[more]
BLAST of MC10g1412 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC10g1412.1MC10g1412.1mRNA