MC10g1410 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC10g1410
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC10: 17484311 .. 17484712 (+)
RNA-Seq ExpressionMC10g1410
SyntenyMC10g1410
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ACAAAAATGGAGACCAATTGGACTATGGCAAAGCATGTGGAACTGAGAGAGATTAATAATGGAACATTGCTTTTGGATGAACAGGAATTGAAGCTGAAAGAGAATTTATTCAAATGGTGGCCACAAAGCGAAGTTGAGGATGTGATGACAAATATAGGGAAGGGAGCGAGAATTGCTATGTTTGATGTGAATGGATCTTGTCCCAAAAAGAAAACTATGAGGAGGATTTCCCAGGATCAGTTCACTATCGAATGGGACGTCAACAAAGATTATATGGTCGGAGATTGGATTTTTATGCGTTGGGATCAAGAGAACAAGTGGTTTTGTTACGAGGTCGTTTTAAACCCTTCTCTTAGAACGAATCCACAACTGTCGGGTGCTTCTTCAAGCCGATCTTATCGG

mRNA sequence

ACAAAAATGGAGACCAATTGGACTATGGCAAAGCATGTGGAACTGAGAGAGATTAATAATGGAACATTGCTTTTGGATGAACAGGAATTGAAGCTGAAAGAGAATTTATTCAAATGGTGGCCACAAAGCGAAGTTGAGGATGTGATGACAAATATAGGGAAGGGAGCGAGAATTGCTATGTTTGATGTGAATGGATCTTGTCCCAAAAAGAAAACTATGAGGAGGATTTCCCAGGATCAGTTCACTATCGAATGGGACGTCAACAAAGATTATATGGTCGGAGATTGGATTTTTATGCGTTGGGATCAAGAGAACAAGTGGTTTTGTTACGAGGTCGTTTTAAACCCTTCTCTTAGAACGAATCCACAACTGTCGGGTGCTTCTTCAAGCCGATCTTATCGG

Coding sequence (CDS)

ACAAAAATGGAGACCAATTGGACTATGGCAAAGCATGTGGAACTGAGAGAGATTAATAATGGAACATTGCTTTTGGATGAACAGGAATTGAAGCTGAAAGAGAATTTATTCAAATGGTGGCCACAAAGCGAAGTTGAGGATGTGATGACAAATATAGGGAAGGGAGCGAGAATTGCTATGTTTGATGTGAATGGATCTTGTCCCAAAAAGAAAACTATGAGGAGGATTTCCCAGGATCAGTTCACTATCGAATGGGACGTCAACAAAGATTATATGGTCGGAGATTGGATTTTTATGCGTTGGGATCAAGAGAACAAGTGGTTTTGTTACGAGGTCGTTTTAAACCCTTCTCTTAGAACGAATCCACAACTGTCGGGTGCTTCTTCAAGCCGATCTTATCGG

Protein sequence

TKMETNWTMAKHVELREINNGTLLLDEQELKLKENLFKWWPQSEVEDVMTNIGKGARIAMFDVNGSCPKKKTMRRISQDQFTIEWDVNKDYMVGDWIFMRWDQENKWFCYEVVLNPSLRTNPQLSGASSSRSYR
Homology
BLAST of MC10g1410 vs. NCBI nr
Match: KAG6575830.1 (hypothetical protein SDJN03_26469, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 80.5 bits (197), Expect = 2.27e-16
Identity = 42/114 (36.84%), Postives = 66/114 (57.89%), Query Frame = 0

Query: 3   METNWTMAKHVELREINNGTLLL--DEQELKLKENLFKWWPQSEVEDVMTNIGKGARIAM 62
           M  +WTM K +E  ++N G L L  D+++  ++ NLF WWP+S+V D+   +G   RI +
Sbjct: 1   MAGDWTMIKKLEDADMN-GLLQLREDDEDADIRANLFNWWPRSKVRDLKRVVGSEVRIIL 60

Query: 63  FDVNGSCPKKKTMRRISQDQFTIEWDV-NKDYMVGDWIFMRWDQENKWFCYEVV 113
           +DVN     + TMR +   ++ IEWD+ NK Y  GD + M WD       Y+++
Sbjct: 61  YDVNMDQAIQTTMRWLGMARYHIEWDIQNKPYSSGDDMLMFWDLRYNRLAYKII 113

BLAST of MC10g1410 vs. NCBI nr
Match: KAG6575832.1 (hypothetical protein SDJN03_26471, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 78.2 bits (191), Expect = 1.81e-15
Identity = 48/133 (36.09%), Postives = 72/133 (54.14%), Query Frame = 0

Query: 3   METNWTMAKHVELREINNGTLLL--DEQELKLKENLFKWWPQSEVEDVMTNIGKGARIAM 62
           M   WTM K ++  ++N G L L  D+ +  +  NLF+WW +S+V D+   IG  A+I +
Sbjct: 1   MTERWTMIKKLQEADMN-GLLQLREDDVDTDINTNLFRWWSRSKVRDLKKQIGNEAKITL 60

Query: 63  FDVNGSCPKKKTMRRISQDQFTIEWDV-NKDYMVGDWIFMRWDQENKWFCYEVVLNPSLR 122
           FD N +     T+R +   ++ IEWDV NK Y  G  + M WD +     Y+V+  P   
Sbjct: 61  FDENTNEVMHTTIRWLGTPRYHIEWDVKNKPYASGQDMLMGWDLKYNRLAYKVLQIPF-- 120

Query: 123 TNPQLSGASSSRS 132
             P++S A SS S
Sbjct: 121 --PEMSDAGSSTS 128

BLAST of MC10g1410 vs. NCBI nr
Match: KAE8651895.1 (hypothetical protein Csa_006112 [Cucumis sativus])

HSP 1 Score: 56.2 bits (134), Expect = 5.91e-07
Identity = 35/84 (41.67%), Postives = 46/84 (54.76%), Query Frame = 0

Query: 56  ARIAMFDVNGSCPKKKTMRRIS-QDQFTIEWDV----NKDYMVGDWIFMRWDQENKWFCY 115
           A+I MFDV      K TM R S  +QF I W      N +Y  GD I + W+ + K  C+
Sbjct: 47  AKITMFDVVSEKSFKATMERKSASNQFLITWKKDFVKNINYKSGDEILLYWEPQIKSLCF 106

Query: 116 EVVLNPSLRTNPQLSGASSSRSYR 134
           E+V   +LRT PQ+SG   S +YR
Sbjct: 107 EIVRCSALRTYPQMSGQYHSYNYR 130

BLAST of MC10g1410 vs. NCBI nr
Match: KAE8651896.1 (hypothetical protein Csa_006487 [Cucumis sativus])

HSP 1 Score: 53.9 bits (128), Expect = 4.50e-06
Identity = 34/83 (40.96%), Postives = 45/83 (54.22%), Query Frame = 0

Query: 56  ARIAMFDVNGSCPKKKTMRRIS-QDQFTIEWDV----NKDYMVGDWIFMRWDQENKWFCY 115
           A+I MFDV      K TM R S  +QF I W      N +Y  GD I + W+ + K  C+
Sbjct: 47  AKITMFDVVSEKSFKATMERKSASNQFLITWKKDFVKNINYKNGDEILLYWEPQIKSLCF 106

Query: 116 EVVLNPSLRTNPQLSGASSSRSY 133
           E+V   +LRT PQ+SG   S +Y
Sbjct: 107 EIVKCSALRTYPQMSGQYRSYNY 129

BLAST of MC10g1410 vs. ExPASy TrEMBL
Match: A0A0A0LD04 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G401960 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 2.86e-07
Identity = 35/84 (41.67%), Postives = 46/84 (54.76%), Query Frame = 0

Query: 56  ARIAMFDVNGSCPKKKTMRRIS-QDQFTIEWDV----NKDYMVGDWIFMRWDQENKWFCY 115
           A+I MFDV      K TM R S  +QF I W      N +Y  GD I + W+ + K  C+
Sbjct: 47  AKITMFDVVSEKSFKATMERKSASNQFLITWKKDFVKNINYKSGDEILLYWEPQIKSLCF 106

Query: 116 EVVLNPSLRTNPQLSGASSSRSYR 134
           E+V   +LRT PQ+SG   S +YR
Sbjct: 107 EIVRCSALRTYPQMSGQYHSYNYR 130

BLAST of MC10g1410 vs. ExPASy TrEMBL
Match: A0A0A0LJ50 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G270130 PE=4 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 2.18e-06
Identity = 34/83 (40.96%), Postives = 45/83 (54.22%), Query Frame = 0

Query: 56  ARIAMFDVNGSCPKKKTMRRIS-QDQFTIEWDV----NKDYMVGDWIFMRWDQENKWFCY 115
           A+I MFDV      K TM R S  +QF I W      N +Y  GD I + W+ + K  C+
Sbjct: 47  AKITMFDVVSEKSFKATMERKSASNQFLITWKKDFVKNINYKNGDEILLYWEPQIKSLCF 106

Query: 116 EVVLNPSLRTNPQLSGASSSRSY 133
           E+V   +LRT PQ+SG   S +Y
Sbjct: 107 EIVKCSALRTYPQMSGQYRSYNY 129

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6575830.12.27e-1636.84hypothetical protein SDJN03_26469, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6575832.11.81e-1536.09hypothetical protein SDJN03_26471, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAE8651895.15.91e-0741.67hypothetical protein Csa_006112 [Cucumis sativus][more]
KAE8651896.14.50e-0640.96hypothetical protein Csa_006487 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
A0A0A0LD042.86e-0741.67Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G401960 PE=4 SV=1[more]
A0A0A0LJ502.18e-0640.96Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G270130 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC10g1410.1MC10g1410.1mRNA