MC10g1358 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC10g1358
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC10: 17067466 .. 17068814 (-)
RNA-Seq ExpressionMC10g1358
SyntenyMC10g1358
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TTGGTGCAGGATGGGAGAGAAGTACTGCCTCCGAACCCGGAGAGCGTTGGCGTAACTGCAACCTCTGCTGCTGCTTCTCATGGAATTGAAGTAGCAGTAGAGTTCAAGCCTGTTGAACACCCAGTCGAGCCTCTGGAAAACGACAGGCCAATTCAGTGCCCATTGCCTGAACCATCAATTCTGAATGTGAGCTGCAGACTTGATCTTCTTGTACAATTTTGTTCATTTTAATGCCTATCCGATCCTTATATCTAGTTCTGTTATACCATATGTATATATCCAAGGCGAAGCAAGTGGCTCAAGATCTAGTTCTGTTATACCATATGTATATATCCAAGGCGAAGCAAGTGGCTCAACACTTTATCTTCATGAGTGTTAGACAAGTTGCGGTCGCAAAAATTGAATATTCTAGATTAATTTTGTAAGGTCAACTCGTGATTTTAAAGGCGAAATTTAGAACCATACAAAAAACCAATATAAGCTTCATAGAGTAAAGGCGTTCCTTCATTGGAAAAGGACCAAAGTCATAGGTTTAAATTTCTAGCTTATGCCTATGGGGTTTCCTGGCATGGGAATTTCTAGGAACCCCAACCGGGCAATGTTGCCGATTTGGTAAAGTTAGTTCAAACATGTGAGATCAAACAAAGAACTATGGATTCAGAAGGACTTGGGTTAATTTGTTCTTCATTCAACTTGAATGATATTAATTTCTCTTATCTATGAGGGTGAAGTATGTAAAAGTTTGGCTGAGGATTCTTTCTGAAAAAATACAAGTGCTTTTAAGGTCATTGTTAGCTTCTATTTATTAGTGATACCTTATTTTGAGATTTCTTTTCCTCTTTCTGAACATTTAGTATGCAGGTGTCGATACGTCTACCTGCAAGTTTTTTTCTTTTTCTCTTTCCACCCAGGGCACTATTGTCAAAGTTTGTTAAAAAATTTACTTGCACAATATGTATTGTCTCGGCCCTCTCGGGTTTTGTGGATTAAGTATAACATTTATGATAGGTGAAGTTTTGAAGCTATGAAGCTGGTCTCGATTGGATTAACTGTTAGGGAATTATGATGTTGTTGATTTCCATATTCATTTGCCAAACTTATTGGTGAAGGTTGTAGATTTGAGATATATTTTGAGATCTAAATCTGATTTTGAACTCCTCAATCACTAGGATGGCACAATATGGAAGCAGCGATCTGCGAGTATGCGTAAACTGGCAGATTTGCCTGTGATGAAGGAAGCTGAAGTTGGCGAGACAAGACCACAGGCGACACGGCCAAATCGCTTGATCTTACCATCGATCAGTGCTCCCGAACGTAACATCCTAAACCTACTCGAGGAATCTGGGATA

mRNA sequence

TTGGTGCAGGATGGGAGAGAAGTACTGCCTCCGAACCCGGAGAGCGTTGGCGTAACTGCAACCTCTGCTGCTGCTTCTCATGGAATTGAAGTAGCAGTAGAGTTCAAGCCTGTTGAACACCCAGTCGAGCCTCTGGAAAACGACAGGCCAATTCAGTGCCCATTGCCTGAACCATCAATTCTGAATGATGGCACAATATGGAAGCAGCGATCTGCGAGTATGCGTAAACTGGCAGATTTGCCTGTGATGAAGGAAGCTGAAGTTGGCGAGACAAGACCACAGGCGACACGGCCAAATCGCTTGATCTTACCATCGATCAGTGCTCCCGAACGTAACATCCTAAACCTACTCGAGGAATCTGGGATA

Coding sequence (CDS)

TTGGTGCAGGATGGGAGAGAAGTACTGCCTCCGAACCCGGAGAGCGTTGGCGTAACTGCAACCTCTGCTGCTGCTTCTCATGGAATTGAAGTAGCAGTAGAGTTCAAGCCTGTTGAACACCCAGTCGAGCCTCTGGAAAACGACAGGCCAATTCAGTGCCCATTGCCTGAACCATCAATTCTGAATGATGGCACAATATGGAAGCAGCGATCTGCGAGTATGCGTAAACTGGCAGATTTGCCTGTGATGAAGGAAGCTGAAGTTGGCGAGACAAGACCACAGGCGACACGGCCAAATCGCTTGATCTTACCATCGATCAGTGCTCCCGAACGTAACATCCTAAACCTACTCGAGGAATCTGGGATA

Protein sequence

LVQDGREVLPPNPESVGVTATSAAASHGIEVAVEFKPVEHPVEPLENDRPIQCPLPEPSILNDGTIWKQRSASMRKLADLPVMKEAEVGETRPQATRPNRLILPSISAPERNILNLLEESGI
Homology
BLAST of MC10g1358 vs. NCBI nr
Match: XP_022145314.1 (uncharacterized protein LOC111014798 [Momordica charantia])

HSP 1 Score: 238 bits (608), Expect = 7.58e-79
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0

Query: 4   DGREVLPPNPESVGVTATSAAASHGIEVAVEFKPVEHPVEPLENDRPIQCPLPEPSILND 63
           DGREVLPPNPESVGVTATSAAASHGIEVAVEFKPVEHPVEPLENDRPIQCPLPEPSILND
Sbjct: 23  DGREVLPPNPESVGVTATSAAASHGIEVAVEFKPVEHPVEPLENDRPIQCPLPEPSILND 82

Query: 64  GTIWKQRSASMRKLADLPVMKEAEVGETRPQATRPNRLILPSISAPERNILNLLEESGI 122
           GTIWKQRSASMRKLADLPVMKEAEVGETRPQATRPNRLILPSISAPERNILNLLEESGI
Sbjct: 83  GTIWKQRSASMRKLADLPVMKEAEVGETRPQATRPNRLILPSISAPERNILNLLEESGI 141

BLAST of MC10g1358 vs. NCBI nr
Match: KAA0053008.1 (uncharacterized protein E6C27_scaffold344G001200 [Cucumis melo var. makuwa] >TYK11464.1 uncharacterized protein E5676_scaffold139G001210 [Cucumis melo var. makuwa])

HSP 1 Score: 206 bits (525), Expect = 3.20e-66
Identity = 103/122 (84.43%), Postives = 111/122 (90.98%), Query Frame = 0

Query: 1   LVQDGREVLPPNPESVGVTATSAAASHGIEVAVEFKPVEHPVEPLENDRPIQCPLPEPSI 60
           L++DGRE LPPNPES GV+ATSAAASHGIEVAVEFKPVEHP+EPL+ND+PIQCPLPEPSI
Sbjct: 21  LMEDGREGLPPNPESTGVSATSAAASHGIEVAVEFKPVEHPIEPLDNDQPIQCPLPEPSI 80

Query: 61  LNDGTIWKQRSASMRKLADLPVMKEAEVGETRPQATRPNRLILPSISAPERNILNLLEES 120
           LNDG IWK+R +SMRKL DLPVMKEAEVGETRP   RP R ILPSISAPE NILNLLEES
Sbjct: 81  LNDGRIWKERVSSMRKLPDLPVMKEAEVGETRP---RPTRTILPSISAPEHNILNLLEES 139

Query: 121 GI 122
           GI
Sbjct: 141 GI 139

BLAST of MC10g1358 vs. NCBI nr
Match: XP_008448621.1 (PREDICTED: uncharacterized protein LOC103490741 isoform X1 [Cucumis melo])

HSP 1 Score: 206 bits (525), Expect = 3.77e-66
Identity = 103/122 (84.43%), Postives = 111/122 (90.98%), Query Frame = 0

Query: 1   LVQDGREVLPPNPESVGVTATSAAASHGIEVAVEFKPVEHPVEPLENDRPIQCPLPEPSI 60
           L++DGRE LPPNPES GV+ATSAAASHGIEVAVEFKPVEHP+EPL+ND+PIQCPLPEPSI
Sbjct: 26  LMEDGREGLPPNPESTGVSATSAAASHGIEVAVEFKPVEHPIEPLDNDQPIQCPLPEPSI 85

Query: 61  LNDGTIWKQRSASMRKLADLPVMKEAEVGETRPQATRPNRLILPSISAPERNILNLLEES 120
           LNDG IWK+R +SMRKL DLPVMKEAEVGETRP   RP R ILPSISAPE NILNLLEES
Sbjct: 86  LNDGRIWKERVSSMRKLPDLPVMKEAEVGETRP---RPTRTILPSISAPEHNILNLLEES 144

Query: 121 GI 122
           GI
Sbjct: 146 GI 144

BLAST of MC10g1358 vs. NCBI nr
Match: XP_038891760.1 (uncharacterized protein LOC120081150 isoform X2 [Benincasa hispida])

HSP 1 Score: 204 bits (519), Expect = 1.33e-65
Identity = 102/121 (84.30%), Postives = 111/121 (91.74%), Query Frame = 0

Query: 2   VQDGREVLPPNPESVGVTATSAAASHGIEVAVEFKPVEHPVEPLENDRPIQCPLPEPSIL 61
           ++DGRE LPPNPES GV+ATSAAASHGIEVAVEFKPVEHP+EPL+NDRPIQCPLPEPSIL
Sbjct: 1   MEDGREGLPPNPESTGVSATSAAASHGIEVAVEFKPVEHPIEPLDNDRPIQCPLPEPSIL 60

Query: 62  NDGTIWKQRSASMRKLADLPVMKEAEVGETRPQATRPNRLILPSISAPERNILNLLEESG 121
           NDG IWK+R +S+RKL DLPVMKEAEVGETRP+ATR    ILPSISAPE NILNLLEESG
Sbjct: 61  NDGRIWKERVSSIRKLPDLPVMKEAEVGETRPRATRT---ILPSISAPEHNILNLLEESG 118

BLAST of MC10g1358 vs. NCBI nr
Match: XP_031738534.1 (uncharacterized protein LOC101208810 isoform X2 [Cucumis sativus] >KAE8650016.1 hypothetical protein Csa_010106 [Cucumis sativus])

HSP 1 Score: 203 bits (517), Expect = 2.68e-65
Identity = 101/121 (83.47%), Postives = 109/121 (90.08%), Query Frame = 0

Query: 2   VQDGREVLPPNPESVGVTATSAAASHGIEVAVEFKPVEHPVEPLENDRPIQCPLPEPSIL 61
           ++DGRE LPPNPES GV+ATSA ASHGIEVAVEFKPVEHP+EPL+ND+PIQCPLPEPSIL
Sbjct: 1   MEDGREGLPPNPESTGVSATSATASHGIEVAVEFKPVEHPIEPLDNDQPIQCPLPEPSIL 60

Query: 62  NDGTIWKQRSASMRKLADLPVMKEAEVGETRPQATRPNRLILPSISAPERNILNLLEESG 121
           NDG IWK+R +SMRKL DLPVMKEAEVGETRP   RP R ILPSISAPE NILNLLEESG
Sbjct: 61  NDGRIWKERVSSMRKLPDLPVMKEAEVGETRP---RPTRTILPSISAPEHNILNLLEESG 118

BLAST of MC10g1358 vs. ExPASy TrEMBL
Match: A0A6J1CUV8 (uncharacterized protein LOC111014798 OS=Momordica charantia OX=3673 GN=LOC111014798 PE=4 SV=1)

HSP 1 Score: 238 bits (608), Expect = 3.67e-79
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0

Query: 4   DGREVLPPNPESVGVTATSAAASHGIEVAVEFKPVEHPVEPLENDRPIQCPLPEPSILND 63
           DGREVLPPNPESVGVTATSAAASHGIEVAVEFKPVEHPVEPLENDRPIQCPLPEPSILND
Sbjct: 23  DGREVLPPNPESVGVTATSAAASHGIEVAVEFKPVEHPVEPLENDRPIQCPLPEPSILND 82

Query: 64  GTIWKQRSASMRKLADLPVMKEAEVGETRPQATRPNRLILPSISAPERNILNLLEESGI 122
           GTIWKQRSASMRKLADLPVMKEAEVGETRPQATRPNRLILPSISAPERNILNLLEESGI
Sbjct: 83  GTIWKQRSASMRKLADLPVMKEAEVGETRPQATRPNRLILPSISAPERNILNLLEESGI 141

BLAST of MC10g1358 vs. ExPASy TrEMBL
Match: A0A5D3CJW0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G001210 PE=4 SV=1)

HSP 1 Score: 206 bits (525), Expect = 1.55e-66
Identity = 103/122 (84.43%), Postives = 111/122 (90.98%), Query Frame = 0

Query: 1   LVQDGREVLPPNPESVGVTATSAAASHGIEVAVEFKPVEHPVEPLENDRPIQCPLPEPSI 60
           L++DGRE LPPNPES GV+ATSAAASHGIEVAVEFKPVEHP+EPL+ND+PIQCPLPEPSI
Sbjct: 21  LMEDGREGLPPNPESTGVSATSAAASHGIEVAVEFKPVEHPIEPLDNDQPIQCPLPEPSI 80

Query: 61  LNDGTIWKQRSASMRKLADLPVMKEAEVGETRPQATRPNRLILPSISAPERNILNLLEES 120
           LNDG IWK+R +SMRKL DLPVMKEAEVGETRP   RP R ILPSISAPE NILNLLEES
Sbjct: 81  LNDGRIWKERVSSMRKLPDLPVMKEAEVGETRP---RPTRTILPSISAPEHNILNLLEES 139

Query: 121 GI 122
           GI
Sbjct: 141 GI 139

BLAST of MC10g1358 vs. ExPASy TrEMBL
Match: A0A1S3BKR4 (uncharacterized protein LOC103490741 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490741 PE=4 SV=1)

HSP 1 Score: 206 bits (525), Expect = 1.82e-66
Identity = 103/122 (84.43%), Postives = 111/122 (90.98%), Query Frame = 0

Query: 1   LVQDGREVLPPNPESVGVTATSAAASHGIEVAVEFKPVEHPVEPLENDRPIQCPLPEPSI 60
           L++DGRE LPPNPES GV+ATSAAASHGIEVAVEFKPVEHP+EPL+ND+PIQCPLPEPSI
Sbjct: 26  LMEDGREGLPPNPESTGVSATSAAASHGIEVAVEFKPVEHPIEPLDNDQPIQCPLPEPSI 85

Query: 61  LNDGTIWKQRSASMRKLADLPVMKEAEVGETRPQATRPNRLILPSISAPERNILNLLEES 120
           LNDG IWK+R +SMRKL DLPVMKEAEVGETRP   RP R ILPSISAPE NILNLLEES
Sbjct: 86  LNDGRIWKERVSSMRKLPDLPVMKEAEVGETRP---RPTRTILPSISAPEHNILNLLEES 144

Query: 121 GI 122
           GI
Sbjct: 146 GI 144

BLAST of MC10g1358 vs. ExPASy TrEMBL
Match: A0A1S3BL03 (uncharacterized protein LOC103490741 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103490741 PE=4 SV=1)

HSP 1 Score: 204 bits (518), Expect = 1.75e-65
Identity = 102/119 (85.71%), Postives = 108/119 (90.76%), Query Frame = 0

Query: 4   DGREVLPPNPESVGVTATSAAASHGIEVAVEFKPVEHPVEPLENDRPIQCPLPEPSILND 63
           DGRE LPPNPES GV+ATSAAASHGIEVAVEFKPVEHP+EPL+ND+PIQCPLPEPSILND
Sbjct: 23  DGREGLPPNPESTGVSATSAAASHGIEVAVEFKPVEHPIEPLDNDQPIQCPLPEPSILND 82

Query: 64  GTIWKQRSASMRKLADLPVMKEAEVGETRPQATRPNRLILPSISAPERNILNLLEESGI 122
           G IWK+R +SMRKL DLPVMKEAEVGETRP   RP R ILPSISAPE NILNLLEESGI
Sbjct: 83  GRIWKERVSSMRKLPDLPVMKEAEVGETRP---RPTRTILPSISAPEHNILNLLEESGI 138

BLAST of MC10g1358 vs. ExPASy TrEMBL
Match: A0A0A0L159 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G006710 PE=4 SV=1)

HSP 1 Score: 202 bits (514), Expect = 7.12e-65
Identity = 101/119 (84.87%), Postives = 107/119 (89.92%), Query Frame = 0

Query: 4   DGREVLPPNPESVGVTATSAAASHGIEVAVEFKPVEHPVEPLENDRPIQCPLPEPSILND 63
           DGRE LPPNPES GV+ATSA ASHGIEVAVEFKPVEHP+EPL+ND+PIQCPLPEPSILND
Sbjct: 23  DGREGLPPNPESTGVSATSATASHGIEVAVEFKPVEHPIEPLDNDQPIQCPLPEPSILND 82

Query: 64  GTIWKQRSASMRKLADLPVMKEAEVGETRPQATRPNRLILPSISAPERNILNLLEESGI 122
           G IWK+R +SMRKL DLPVMKEAEVGETRP   RP R ILPSISAPE NILNLLEESGI
Sbjct: 83  GRIWKERVSSMRKLPDLPVMKEAEVGETRP---RPTRTILPSISAPEHNILNLLEESGI 138

BLAST of MC10g1358 vs. TAIR 10
Match: AT1G31940.1 (unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G35585.1); Has 67 Blast hits to 67 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 148.3 bits (373), Expect = 4.1e-36
Identity = 77/124 (62.10%), Postives = 93/124 (75.00%), Query Frame = 0

Query: 4   DGREVLPPNPESVGVTATSA-AASHGIEVAVEFKPVEHPVEPLENDRPIQCPLPEPSILN 63
           D +EVL PN + +  T T+A  A+HGIEVA EFKPVEHPVEPL+ND PIQCPLPEPSILN
Sbjct: 23  DDKEVLAPNSDVIAATTTTATTATHGIEVATEFKPVEHPVEPLDNDLPIQCPLPEPSILN 82

Query: 64  DGTIWKQR-SASMRKLADLPVMKEAEVGET------RPQATRPNRLILPSISAPERNILN 120
           DG IWK+R SASMR+  DL ++K+    E+       P+  +PNR ILPS+SAPE N+LN
Sbjct: 83  DGRIWKERVSASMRRKGDLQIVKDEAASESDGSAPKPPRPPQPNRSILPSLSAPEHNLLN 142

BLAST of MC10g1358 vs. TAIR 10
Match: AT2G35585.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G31940.1); Has 67 Blast hits to 67 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 134.0 bits (336), Expect = 7.9e-32
Identity = 70/127 (55.12%), Postives = 91/127 (71.65%), Query Frame = 0

Query: 4   DGREVLPPNPESVGVTATSAAASHGIEVAVEFKPVEHPVEPLENDRPIQCPLPEPSILND 63
           DGREVL P  +    T T+   +HGIEVA EFKPV+HP+EPL+ND+PIQCPLPEPSILND
Sbjct: 23  DGREVLSPRSDLAPATNTTTTETHGIEVATEFKPVDHPMEPLDNDQPIQCPLPEPSILND 82

Query: 64  GTIWKQR--SASMRKLADLPVM-----KEAEVGET----RPQATRPNRLILPSISAPERN 120
           G +WK+R  ++SMR+ +DL ++     +E++V  T    R      NR ILPS+SAPE +
Sbjct: 83  GRLWKERVSASSMRRRSDLAIVQDGMDEESDVSVTSIPSRTSQCNTNRPILPSLSAPEHD 142

BLAST of MC10g1358 vs. TAIR 10
Match: AT2G01913.1 (unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 44.7 bits (104), Expect = 6.3e-05
Identity = 23/48 (47.92%), Postives = 28/48 (58.33%), Query Frame = 0

Query: 14 ESVGVTATSAAASHGIEVAVEFKPVEHPVEPLENDRPIQCPLPEPSIL 62
          ESV  T          +  VEF PVEHP+EP E DRP++CP+P  S L
Sbjct: 10 ESVEETVMMEYDEETNQFDVEFCPVEHPIEPEEEDRPVKCPVPISSSL 57

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_022145314.17.58e-79100.00uncharacterized protein LOC111014798 [Momordica charantia][more]
KAA0053008.13.20e-6684.43uncharacterized protein E6C27_scaffold344G001200 [Cucumis melo var. makuwa] >TYK... [more]
XP_008448621.13.77e-6684.43PREDICTED: uncharacterized protein LOC103490741 isoform X1 [Cucumis melo][more]
XP_038891760.11.33e-6584.30uncharacterized protein LOC120081150 isoform X2 [Benincasa hispida][more]
XP_031738534.12.68e-6583.47uncharacterized protein LOC101208810 isoform X2 [Cucumis sativus] >KAE8650016.1 ... [more]
Match NameE-valueIdentityDescription
A0A6J1CUV83.67e-79100.00uncharacterized protein LOC111014798 OS=Momordica charantia OX=3673 GN=LOC111014... [more]
A0A5D3CJW01.55e-6684.43Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3BKR41.82e-6684.43uncharacterized protein LOC103490741 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A1S3BL031.75e-6585.71uncharacterized protein LOC103490741 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A0A0L1597.12e-6584.87Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G006710 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G31940.14.1e-3662.10unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures;... [more]
AT2G35585.17.9e-3255.12unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT2G01913.16.3e-0547.92unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae ... [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34196OS02G0697700 PROTEINcoord: 3..122
NoneNo IPR availablePANTHERPTHR34196:SF3SUBFAMILY NOT NAMEDcoord: 3..122

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC10g1358.1MC10g1358.1mRNA