MC10g1228 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC10g1228
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Amino acid adenylation domain-containing protein
Location	MC10: 15531162 .. 15531371 (+)
RNA-Seq Expression	MC10g1228
Synteny	MC10g1228

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGAGTCCCAAAGCTTTAGCCTTAATCGCGGTGCAGAGGCAGACAGCAGCTTCAAGATCAGCCAGGCCCTGGATCAGCGTGCAACATGGGGTTTTCGGTGGTGTGCCGATCACCACGTGCACCAAACCGTCTAGCACGTCGGCGCAAACCCCCAACTTGAGGGTGTCGGTTGGGCACCGGGGCTGTGGTGCGTGGTGCTTCGGGGGG

mRNA sequence

ATGTTGAGTCCCAAAGCTTTAGCCTTAATCGCGGTGCAGAGGCAGACAGCAGCTTCAAGATCAGCCAGGCCCTGGATCAGCGTGCAACATGGGGTTTTCGGTGGTGTGCCGATCACCACGTGCACCAAACCGTCTAGCACGTCGGCGCAAACCCCCAACTTGAGGGTGTCGGTTGGGCACCGGGGCTGTGGTGCGTGGTGCTTCGGGGGG

Coding sequence (CDS)

ATGTTGAGTCCCAAAGCTTTAGCCTTAATCGCGGTGCAGAGGCAGACAGCAGCTTCAAGATCAGCCAGGCCCTGGATCAGCGTGCAACATGGGGTTTTCGGTGGTGTGCCGATCACCACGTGCACCAAACCGTCTAGCACGTCGGCGCAAACCCCCAACTTGAGGGTGTCGGTTGGGCACCGGGGCTGTGGTGCGTGGTGCTTCGGGGGG

Protein sequence

MLSPKALALIAVQRQTAASRSARPWISVQHGVFGGVPITTCTKPSSTSAQTPNLRVSVGHRGCGAWCFGG

Homology

[Close]

BLAST of MC10g1228 vs. NCBI nr
Match: QCD81273.1 (hypothetical protein DEO72_LG2g1598 [Vigna unguiculata])

HSP 1 Score: 80.9 bits (198), Expect = 2.53e-18
Identity = 43/56 (76.79%), Postives = 45/56 (80.36%), Query Frame = 0


Query: 4  PKALALIAVQRQTAASRSARPWISVQHGVFGGVPITTCTKPSSTSAQTPNLRVSVG 59
          PK LAL AVQRQTAASRSARPW+S QHGVFGG P  T  KP+ TSA TPNLRVS G
Sbjct: 2  PKMLALRAVQRQTAASRSARPWMSSQHGVFGGFPSCTPIKPN-TSAHTPNLRVSAG 56

[Close]

BLAST of MC10g1228 vs. NCBI nr
Match: PON92988.1 (hypothetical protein TorRG33x02_112670 [Trema orientale])

HSP 1 Score: 83.2 bits (204), Expect = 2.54e-18
Identity = 41/59 (69.49%), Postives = 45/59 (76.27%), Query Frame = 0


Query: 2  LSPKALALIAVQRQTAASRSARPWISVQHGVFGGVPITTCTKPSSTSAQTPNLRVSVGH 60
          L P+ LAL+AVQRQ AASRSARPWI VQ GV GGVP+ T T P S SA TPN R S+GH
Sbjct: 4  LIPRILALMAVQRQIAASRSARPWIRVQQGVTGGVPMVTLTNPPSKSAHTPNFRASLGH 62

[Close]

BLAST of MC10g1228 vs. NCBI nr
Match: KAG8486674.1 (hypothetical protein CXB51_019983 [Gossypium anomalum])

HSP 1 Score: 82.4 bits (202), Expect = 4.60e-18
Identity = 44/57 (77.19%), Postives = 44/57 (77.19%), Query Frame = 0


Query: 4  PKALALIAVQRQTAASRSARPWISVQHGVFGGVPITTCTKPSSTSAQTPNLRVSVGH 60
          PK LAL AVQRQTAASRSARPW   QHG  GG P  T TKPS TSAQTPNLRVS GH
Sbjct: 2  PKTLALSAVQRQTAASRSARPWRREQHGCTGGEPTVTLTKPS-TSAQTPNLRVSCGH 57

[Close]

BLAST of MC10g1228 vs. NCBI nr
Match: TYG58385.1 (hypothetical protein ES288_D08G218000v1 [Gossypium darwinii])

HSP 1 Score: 81.6 bits (200), Expect = 4.83e-18
Identity = 43/57 (75.44%), Postives = 44/57 (77.19%), Query Frame = 0


Query: 4  PKALALIAVQRQTAASRSARPWISVQHGVFGGVPITTCTKPSSTSAQTPNLRVSVGH 60
          PK LALIAVQRQTAASRSARPW   QHG  GG PI T TKPS T A TPNLR S+GH
Sbjct: 2  PKTLALIAVQRQTAASRSARPWRREQHGCTGGEPIVTLTKPS-TFAHTPNLRASLGH 57

[Close]

BLAST of MC10g1228 vs. NCBI nr
Match: GER28035.1 (amino acid adenylation domain-containing protein [Striga asiatica])

HSP 1 Score: 80.9 bits (198), Expect = 1.14e-17
Identity = 40/56 (71.43%), Postives = 42/56 (75.00%), Query Frame = 0


Query: 4  PKALALIAVQRQTAASRSARPWISVQHGVFGGVPITTCTKPSSTSAQTPNLRVSVG 59
          PK LALIAV +QTAASRSA PWI VQHGVFGGVPI     P S SA TPN  VS+G
Sbjct: 2  PKTLALIAVHKQTAASRSASPWIRVQHGVFGGVPIVMSINPPSKSAHTPNFSVSLG 57

[Close]

BLAST of MC10g1228 vs. ExPASy TrEMBL
Match: A0A4D6KX88 (Uncharacterized protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG2g1598 PE=4 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 1.23e-18
Identity = 43/56 (76.79%), Postives = 45/56 (80.36%), Query Frame = 0


Query: 4  PKALALIAVQRQTAASRSARPWISVQHGVFGGVPITTCTKPSSTSAQTPNLRVSVG 59
          PK LAL AVQRQTAASRSARPW+S QHGVFGG P  T  KP+ TSA TPNLRVS G
Sbjct: 2  PKMLALRAVQRQTAASRSARPWMSSQHGVFGGFPSCTPIKPN-TSAHTPNLRVSAG 56

[Close]

BLAST of MC10g1228 vs. ExPASy TrEMBL
Match: A0A2P5F5C4 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_112670 PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 1.23e-18
Identity = 41/59 (69.49%), Postives = 45/59 (76.27%), Query Frame = 0


Query: 2  LSPKALALIAVQRQTAASRSARPWISVQHGVFGGVPITTCTKPSSTSAQTPNLRVSVGH 60
          L P+ LAL+AVQRQ AASRSARPWI VQ GV GGVP+ T T P S SA TPN R S+GH
Sbjct: 4  LIPRILALMAVQRQIAASRSARPWIRVQQGVTGGVPMVTLTNPPSKSAHTPNFRASLGH 62

[Close]

BLAST of MC10g1228 vs. ExPASy TrEMBL
Match: A0A5D2BQE9 (Uncharacterized protein OS=Gossypium darwinii OX=34276 GN=ES288_D08G218000v1 PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 2.34e-18
Identity = 43/57 (75.44%), Postives = 44/57 (77.19%), Query Frame = 0


Query: 4  PKALALIAVQRQTAASRSARPWISVQHGVFGGVPITTCTKPSSTSAQTPNLRVSVGH 60
          PK LALIAVQRQTAASRSARPW   QHG  GG PI T TKPS T A TPNLR S+GH
Sbjct: 2  PKTLALIAVQRQTAASRSARPWRREQHGCTGGEPIVTLTKPS-TFAHTPNLRASLGH 57

[Close]

BLAST of MC10g1228 vs. ExPASy TrEMBL
Match: A0A5A7P547 (Amino acid adenylation domain-containing protein OS=Striga asiatica OX=4170 GN=STAS_03795 PE=4 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 5.51e-18
Identity = 40/56 (71.43%), Postives = 42/56 (75.00%), Query Frame = 0


Query: 4  PKALALIAVQRQTAASRSARPWISVQHGVFGGVPITTCTKPSSTSAQTPNLRVSVG 59
          PK LALIAV +QTAASRSA PWI VQHGVFGGVPI     P S SA TPN  VS+G
Sbjct: 2  PKTLALIAVHKQTAASRSASPWIRVQHGVFGGVPIVMSINPPSKSAHTPNFSVSLG 57

[Close]

BLAST of MC10g1228 vs. ExPASy TrEMBL
Match: A0A4D8ZVR6 (Uncharacterized protein OS=Salvia splendens OX=180675 GN=Saspl_044980 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.85e-16
Identity = 42/70 (60.00%), Postives = 45/70 (64.29%), Query Frame = 0


Query: 1   MLSPKALALIAVQRQTAASRSARPWISVQHGVFGGVPITTCTKPSSTSAQTPNLRVSVGH 60
           ML PK LALI VQR TAASRSA PWI VQHGV GGVP+ T  +  S  A  PN R S+GH
Sbjct: 43  MLRPKMLALITVQRHTAASRSASPWIRVQHGVTGGVPMVTLRRFPSRLAHMPNFRASLGH 102

Query: 61  RGC-GAWCFG 69
               G W  G
Sbjct: 103 DALPGCWLGG 112

The following BLAST results are available for this feature:

BLAST of MC10g1228 vs.


Match Name	E-value	Identity	Description

BLAST of MC10g1228 vs. NCBI nr


Match Name	E-value	Identity	Description
QCD81273.1	2.53e-18	76.79	hypothetical protein DEO72_LG2g1598 [Vigna unguiculata]	[more]
PON92988.1	2.54e-18	69.49	hypothetical protein TorRG33x02_112670 [Trema orientale]	[more]
KAG8486674.1	4.60e-18	77.19	hypothetical protein CXB51_019983 [Gossypium anomalum]	[more]
TYG58385.1	4.83e-18	75.44	hypothetical protein ES288_D08G218000v1 [Gossypium darwinii]	[more]
GER28035.1	1.14e-17	71.43	amino acid adenylation domain-containing protein [Striga asiatica]	[more]

BLAST of MC10g1228 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A4D6KX88	1.23e-18	76.79	Uncharacterized protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG2g1598 PE=4 SV=1	[more]
A0A2P5F5C4	1.23e-18	69.49	Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_112670 PE=4 SV...	[more]
A0A5D2BQE9	2.34e-18	75.44	Uncharacterized protein OS=Gossypium darwinii OX=34276 GN=ES288_D08G218000v1 PE=...	[more]
A0A5A7P547	5.51e-18	71.43	Amino acid adenylation domain-containing protein OS=Striga asiatica OX=4170 GN=S...	[more]
A0A4D8ZVR6	1.85e-16	60.00	Uncharacterized protein OS=Salvia splendens OX=180675 GN=Saspl_044980 PE=4 SV=1	[more]

BLAST of MC10g1228 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC10g1228.1	MC10g1228.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane