MC10g1224 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC10g1224
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionNADH-ubiquinone oxidoreductase (Complex I), chain 5
LocationMC10: 15482942 .. 15483052 (+)
RNA-Seq ExpressionMC10g1224
SyntenyMC10g1224
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GGCTCCTTTATGGATCCGATTCTAGTAAGGTCGGGACTGTGGTTGTCCGTCTCCGGTTTGCCAGCTGATAAGATCTTTGAGATTGACCAGCCAACTGGGTTGGTTTGGCTC

mRNA sequence

GGCTCCTTTATGGATCCGATTCTAGTAAGGTCGGGACTGTGGTTGTCCGTCTCCGGTTTGCCAGCTGATAAGATCTTTGAGATTGACCAGCCAACTGGGTTGGTTTGGCTC

Coding sequence (CDS)

GGCTCCTTTATGGATCCGATTCTAGTAAGGTCGGGACTGTGGTTGTCCGTCTCCGGTTTGCCAGCTGATAAGATCTTTGAGATTGACCAGCCAACTGGGTTGGTTTGGCTC

Protein sequence

GSFMDPILVRSGLWLSVSGLPADKIFEIDQPTGLVWL
Homology
BLAST of MC10g1224 vs. NCBI nr
Match: KAF3949553.1 (hypothetical protein CMV_024591 [Castanea mollissima])

HSP 1 Score: 63.9 bits (154), Expect = 1.80e-11
Identity = 29/37 (78.38%), Postives = 30/37 (81.08%), Query Frame = 0

Query: 1   GSFMDPILVRSGLWLSVSGLPADKIFEIDQPTGLVWL 37
           GS   P+LVRSG W SVSGLPADKI EIDQP GLVWL
Sbjct: 65  GSSTPPVLVRSGPWSSVSGLPADKISEIDQPAGLVWL 101

BLAST of MC10g1224 vs. NCBI nr
Match: KAA0040734.1 (NADH-ubiquinone oxidoreductase (complex I), chain 5 [Cucumis melo var. makuwa] >TYK27827.1 NADH-ubiquinone oxidoreductase (complex I), chain 5 [Cucumis melo var. makuwa])

HSP 1 Score: 61.6 bits (148), Expect = 9.42e-11
Identity = 28/39 (71.79%), Postives = 31/39 (79.49%), Query Frame = 0

Query: 1  GSFMD--PILVRSGLWLSVSGLPADKIFEIDQPTGLVWL 37
          G F+   P+LVRSG W SVS LPADKIFEIDQP GL+WL
Sbjct: 44 GEFLSKPPVLVRSGPWSSVSALPADKIFEIDQPAGLLWL 82

BLAST of MC10g1224 vs. NCBI nr
Match: KAF1856957.1 (hypothetical protein Lal_00002454 [Lupinus albus])

HSP 1 Score: 60.8 bits (146), Expect = 1.57e-10
Identity = 26/32 (81.25%), Postives = 28/32 (87.50%), Query Frame = 0

Query: 6  PILVRSGLWLSVSGLPADKIFEIDQPTGLVWL 37
          P+L+RSG W SVSGLPADKI EIDQP GLVWL
Sbjct: 44 PVLIRSGPWSSVSGLPADKISEIDQPAGLVWL 75

BLAST of MC10g1224 vs. NCBI nr
Match: RDY14284.1 (hypothetical protein CR513_00702, partial [Mucuna pruriens])

HSP 1 Score: 60.8 bits (146), Expect = 1.61e-10
Identity = 26/32 (81.25%), Postives = 28/32 (87.50%), Query Frame = 0

Query: 6  PILVRSGLWLSVSGLPADKIFEIDQPTGLVWL 37
          P+L+RSG W SVSGLPADKI EIDQP GLVWL
Sbjct: 45 PVLIRSGPWSSVSGLPADKISEIDQPAGLVWL 76

BLAST of MC10g1224 vs. NCBI nr
Match: GER47773.1 (PKHD-type hydroxylase G432_11150 [Striga asiatica])

HSP 1 Score: 61.2 bits (147), Expect = 6.85e-10
Identity = 27/32 (84.38%), Postives = 28/32 (87.50%), Query Frame = 0

Query: 6  PILVRSGLWLSVSGLPADKIFEIDQPTGLVWL 37
          P+LVRSG W SVSGLPADKI EIDQP GLVWL
Sbjct: 61 PVLVRSGPWSSVSGLPADKISEIDQPAGLVWL 92

BLAST of MC10g1224 vs. ExPASy TrEMBL
Match: A0A5D3DVI9 (NADH-ubiquinone oxidoreductase (Complex I), chain 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold79750G00010 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 4.56e-11
Identity = 28/39 (71.79%), Postives = 31/39 (79.49%), Query Frame = 0

Query: 1  GSFMD--PILVRSGLWLSVSGLPADKIFEIDQPTGLVWL 37
          G F+   P+LVRSG W SVS LPADKIFEIDQP GL+WL
Sbjct: 44 GEFLSKPPVLVRSGPWSSVSALPADKIFEIDQPAGLLWL 82

BLAST of MC10g1224 vs. ExPASy TrEMBL
Match: A0A6A5L5V7 (Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lal_00002454 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 7.60e-11
Identity = 26/32 (81.25%), Postives = 28/32 (87.50%), Query Frame = 0

Query: 6  PILVRSGLWLSVSGLPADKIFEIDQPTGLVWL 37
          P+L+RSG W SVSGLPADKI EIDQP GLVWL
Sbjct: 44 PVLIRSGPWSSVSGLPADKISEIDQPAGLVWL 75

BLAST of MC10g1224 vs. ExPASy TrEMBL
Match: A0A371IH43 (Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_00702 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 7.78e-11
Identity = 26/32 (81.25%), Postives = 28/32 (87.50%), Query Frame = 0

Query: 6  PILVRSGLWLSVSGLPADKIFEIDQPTGLVWL 37
          P+L+RSG W SVSGLPADKI EIDQP GLVWL
Sbjct: 45 PVLIRSGPWSSVSGLPADKISEIDQPAGLVWL 76

BLAST of MC10g1224 vs. ExPASy TrEMBL
Match: A0A5A7QR06 (PKHD-type hydroxylase G432_11150 OS=Striga asiatica OX=4170 GN=STAS_24896 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 3.32e-10
Identity = 27/32 (84.38%), Postives = 28/32 (87.50%), Query Frame = 0

Query: 6  PILVRSGLWLSVSGLPADKIFEIDQPTGLVWL 37
          P+LVRSG W SVSGLPADKI EIDQP GLVWL
Sbjct: 61 PVLVRSGPWSSVSGLPADKISEIDQPAGLVWL 92

BLAST of MC10g1224 vs. ExPASy TrEMBL
Match: A0A072TI43 (Uncharacterized protein OS=Medicago truncatula OX=3880 GN=MTR_0082s0270 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 4.52e-10
Identity = 26/32 (81.25%), Postives = 28/32 (87.50%), Query Frame = 0

Query: 6  PILVRSGLWLSVSGLPADKIFEIDQPTGLVWL 37
          P+L+RSG W SVSGLPADKI EIDQP GLVWL
Sbjct: 44 PVLIRSGPWSSVSGLPADKISEIDQPAGLVWL 75

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAF3949553.11.80e-1178.38hypothetical protein CMV_024591 [Castanea mollissima][more]
KAA0040734.19.42e-1171.79NADH-ubiquinone oxidoreductase (complex I), chain 5 [Cucumis melo var. makuwa] >... [more]
KAF1856957.11.57e-1081.25hypothetical protein Lal_00002454 [Lupinus albus][more]
RDY14284.11.61e-1081.25hypothetical protein CR513_00702, partial [Mucuna pruriens][more]
GER47773.16.85e-1084.38PKHD-type hydroxylase G432_11150 [Striga asiatica][more]
Match NameE-valueIdentityDescription
A0A5D3DVI94.56e-1171.79NADH-ubiquinone oxidoreductase (Complex I), chain 5 OS=Cucumis melo var. makuwa ... [more]
A0A6A5L5V77.60e-1181.25Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lal_00002454 PE=4 SV=1[more]
A0A371IH437.78e-1181.25Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_00702 P... [more]
A0A5A7QR063.32e-1084.38PKHD-type hydroxylase G432_11150 OS=Striga asiatica OX=4170 GN=STAS_24896 PE=4 S... [more]
A0A072TI434.52e-1081.25Uncharacterized protein OS=Medicago truncatula OX=3880 GN=MTR_0082s0270 PE=4 SV=... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC10g1224.1MC10g1224.1mRNA