MC10g1221 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC10g1221
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Cell wall-associated hydrolase
Location	MC10: 15459006 .. 15459080 (+)
RNA-Seq Expression	MC10g1221
Synteny	MC10g1221

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GCAGTTCGGGGCGGACAACCCAACCCTTGGAACATACTACAACCCCAGGTGGCTAAGAGCCGACATCGAGGTGCC

mRNA sequence

GCAGTTCGGGGCGGACAACCCAACCCTTGGAACATACTACAACCCCAGGTGGCTAAGAGCCGACATCGAGGTGCC

Coding sequence (CDS)

GCAGTTCGGGGCGGACAACCCAACCCTTGGAACATACTACAACCCCAGGTGGCTAAGAGCCGACATCGAGGTGCC

Protein sequence

AVRGGQPNPWNILQPQVAKSRHRGA

Homology

[Close]

BLAST of MC10g1221 vs. NCBI nr
Match: QHO21812.1 (Cell wall-associated hydrolase [Arachis hypogaea])

HSP 1 Score: 52.8 bits (125), Expect = 4.87e-08
Identity = 22/25 (88.00%), Postives = 23/25 (92.00%), Query Frame = 0


Query: 1  AVRGGQPNPWNILQPQVAKSRHRGA 25
          A+ G QPNPWNILQPQVAKSRHRGA
Sbjct: 16 ALMGEQPNPWNILQPQVAKSRHRGA 40

[Close]

BLAST of MC10g1221 vs. NCBI nr
Match: TKY46757.1 (cell wall-associated hydrolase [Spatholobus suberectus])

HSP 1 Score: 52.8 bits (125), Expect = 7.77e-08
Identity = 22/25 (88.00%), Postives = 23/25 (92.00%), Query Frame = 0


Query: 1  AVRGGQPNPWNILQPQVAKSRHRGA 25
          A+ G QPNPWNILQPQVAKSRHRGA
Sbjct: 16 ALMGEQPNPWNILQPQVAKSRHRGA 40

[Close]

BLAST of MC10g1221 vs. NCBI nr
Match: PWA96868.1 (ORF58f [Artemisia annua])

HSP 1 Score: 52.8 bits (125), Expect = 9.13e-08
Identity = 22/25 (88.00%), Postives = 23/25 (92.00%), Query Frame = 0


Query: 1  AVRGGQPNPWNILQPQVAKSRHRGA 25
          A+ G QPNPWNILQPQVAKSRHRGA
Sbjct: 16 ALMGEQPNPWNILQPQVAKSRHRGA 40

[Close]

BLAST of MC10g1221 vs. NCBI nr
Match: QHN92996.1 (uncharacterized protein DS421_17g588840 [Arachis hypogaea])

HSP 1 Score: 52.8 bits (125), Expect = 1.43e-07
Identity = 22/25 (88.00%), Postives = 23/25 (92.00%), Query Frame = 0


Query: 1  AVRGGQPNPWNILQPQVAKSRHRGA 25
          A+ G QPNPWNILQPQVAKSRHRGA
Sbjct: 63 ALMGEQPNPWNILQPQVAKSRHRGA 87

[Close]

BLAST of MC10g1221 vs. NCBI nr
Match: KAF3449752.1 (hypothetical protein FNV43_RR05830 [Rhamnella rubrinervis])

HSP 1 Score: 52.8 bits (125), Expect = 1.43e-07
Identity = 22/25 (88.00%), Postives = 23/25 (92.00%), Query Frame = 0


Query: 1  AVRGGQPNPWNILQPQVAKSRHRGA 25
          A+ G QPNPWNILQPQVAKSRHRGA
Sbjct: 63 ALMGEQPNPWNILQPQVAKSRHRGA 87

[Close]

BLAST of MC10g1221 vs. ExPASy TrEMBL
Match: A0A2U1QFV9 (ORF58f OS=Artemisia annua OX=35608 GN=CTI12_AA035350 PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 4.42e-08
Identity = 22/25 (88.00%), Postives = 23/25 (92.00%), Query Frame = 0


Query: 1  AVRGGQPNPWNILQPQVAKSRHRGA 25
          A+ G QPNPWNILQPQVAKSRHRGA
Sbjct: 16 ALMGEQPNPWNILQPQVAKSRHRGA 40

[Close]

BLAST of MC10g1221 vs. ExPASy TrEMBL
Match: A0A2I0W8Y0 (Uncharacterized protein OS=Dendrobium catenatum OX=906689 GN=MA16_Dca006705 PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 6.90e-08
Identity = 22/25 (88.00%), Postives = 23/25 (92.00%), Query Frame = 0


Query: 1  AVRGGQPNPWNILQPQVAKSRHRGA 25
          A+ G QPNPWNILQPQVAKSRHRGA
Sbjct: 63 ALMGEQPNPWNILQPQVAKSRHRGA 87

[Close]

BLAST of MC10g1221 vs. ExPASy TrEMBL
Match: A0A2U1NFY8 (Cell wall-associated hydrolase OS=Artemisia annua OX=35608 GN=CTI12_AA270580 PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 9.21e-08
Identity = 22/25 (88.00%), Postives = 23/25 (92.00%), Query Frame = 0


Query: 1   AVRGGQPNPWNILQPQVAKSRHRGA 25
           A+ G QPNPWNILQPQVAKSRHRGA
Sbjct: 77  ALMGEQPNPWNILQPQVAKSRHRGA 101

[Close]

BLAST of MC10g1221 vs. ExPASy TrEMBL
Match: A0A5E4GMM3 (PREDICTED: cell wall-associated hydrolase OS=Prunus dulcis OX=3755 GN=ALMOND_2B015387 PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 3.45e-07
Identity = 22/25 (88.00%), Postives = 23/25 (92.00%), Query Frame = 0


Query: 1   AVRGGQPNPWNILQPQVAKSRHRGA 25
           A+ G QPNPWNILQPQVAKSRHRGA
Sbjct: 151 ALMGEQPNPWNILQPQVAKSRHRGA 175

[Close]

BLAST of MC10g1221 vs. ExPASy TrEMBL
Match: A0A6A5MVE8 (Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lal_00033117 PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 3.53e-07
Identity = 22/25 (88.00%), Postives = 23/25 (92.00%), Query Frame = 0


Query: 1   AVRGGQPNPWNILQPQVAKSRHRGA 25
           A+ G QPNPWNILQPQVAKSRHRGA
Sbjct: 109 ALMGEQPNPWNILQPQVAKSRHRGA 133

The following BLAST results are available for this feature:

BLAST of MC10g1221 vs.


Match Name	E-value	Identity	Description

BLAST of MC10g1221 vs. NCBI nr


Match Name	E-value	Identity	Description
QHO21812.1	4.87e-08	88.00	Cell wall-associated hydrolase [Arachis hypogaea]	[more]
TKY46757.1	7.77e-08	88.00	cell wall-associated hydrolase [Spatholobus suberectus]	[more]
PWA96868.1	9.13e-08	88.00	ORF58f [Artemisia annua]	[more]
QHN92996.1	1.43e-07	88.00	uncharacterized protein DS421_17g588840 [Arachis hypogaea]	[more]
KAF3449752.1	1.43e-07	88.00	hypothetical protein FNV43_RR05830 [Rhamnella rubrinervis]	[more]

BLAST of MC10g1221 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2U1QFV9	4.42e-08	88.00	ORF58f OS=Artemisia annua OX=35608 GN=CTI12_AA035350 PE=4 SV=1	[more]
A0A2I0W8Y0	6.90e-08	88.00	Uncharacterized protein OS=Dendrobium catenatum OX=906689 GN=MA16_Dca006705 PE=4...	[more]
A0A2U1NFY8	9.21e-08	88.00	Cell wall-associated hydrolase OS=Artemisia annua OX=35608 GN=CTI12_AA270580 PE=...	[more]
A0A5E4GMM3	3.45e-07	88.00	PREDICTED: cell wall-associated hydrolase OS=Prunus dulcis OX=3755 GN=ALMOND_2B0...	[more]
A0A6A5MVE8	3.53e-07	88.00	Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lal_00033117 PE=4 SV=1	[more]

BLAST of MC10g1221 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC10g1221.1	MC10g1221.1	mRNA