MC10g1221 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC10g1221
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionCell wall-associated hydrolase
LocationMC10: 15459006 .. 15459080 (+)
RNA-Seq ExpressionMC10g1221
SyntenyMC10g1221
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GCAGTTCGGGGCGGACAACCCAACCCTTGGAACATACTACAACCCCAGGTGGCTAAGAGCCGACATCGAGGTGCC

mRNA sequence

GCAGTTCGGGGCGGACAACCCAACCCTTGGAACATACTACAACCCCAGGTGGCTAAGAGCCGACATCGAGGTGCC

Coding sequence (CDS)

GCAGTTCGGGGCGGACAACCCAACCCTTGGAACATACTACAACCCCAGGTGGCTAAGAGCCGACATCGAGGTGCC

Protein sequence

AVRGGQPNPWNILQPQVAKSRHRGA
Homology
[Close]
BLAST of MC10g1221 vs. NCBI nr
Match: QHO21812.1 (Cell wall-associated hydrolase [Arachis hypogaea])

HSP 1 Score: 52.8 bits (125), Expect = 4.87e-08
Identity = 22/25 (88.00%), Postives = 23/25 (92.00%), Query Frame = 0 

Query: 1  AVRGGQPNPWNILQPQVAKSRHRGA 25
          A+ G QPNPWNILQPQVAKSRHRGA
Sbjct: 16 ALMGEQPNPWNILQPQVAKSRHRGA 40

[Close]
BLAST of MC10g1221 vs. NCBI nr
Match: TKY46757.1 (cell wall-associated hydrolase [Spatholobus suberectus])

HSP 1 Score: 52.8 bits (125), Expect = 7.77e-08
Identity = 22/25 (88.00%), Postives = 23/25 (92.00%), Query Frame = 0 

Query: 1  AVRGGQPNPWNILQPQVAKSRHRGA 25
          A+ G QPNPWNILQPQVAKSRHRGA
Sbjct: 16 ALMGEQPNPWNILQPQVAKSRHRGA 40

[Close]
BLAST of MC10g1221 vs. NCBI nr
Match: PWA96868.1 (ORF58f [Artemisia annua])

HSP 1 Score: 52.8 bits (125), Expect = 9.13e-08
Identity = 22/25 (88.00%), Postives = 23/25 (92.00%), Query Frame = 0 

Query: 1  AVRGGQPNPWNILQPQVAKSRHRGA 25
          A+ G QPNPWNILQPQVAKSRHRGA
Sbjct: 16 ALMGEQPNPWNILQPQVAKSRHRGA 40

[Close]
BLAST of MC10g1221 vs. NCBI nr
Match: QHN92996.1 (uncharacterized protein DS421_17g588840 [Arachis hypogaea])

HSP 1 Score: 52.8 bits (125), Expect = 1.43e-07
Identity = 22/25 (88.00%), Postives = 23/25 (92.00%), Query Frame = 0 

Query: 1  AVRGGQPNPWNILQPQVAKSRHRGA 25
          A+ G QPNPWNILQPQVAKSRHRGA
Sbjct: 63 ALMGEQPNPWNILQPQVAKSRHRGA 87

[Close]
BLAST of MC10g1221 vs. NCBI nr
Match: KAF3449752.1 (hypothetical protein FNV43_RR05830 [Rhamnella rubrinervis])

HSP 1 Score: 52.8 bits (125), Expect = 1.43e-07
Identity = 22/25 (88.00%), Postives = 23/25 (92.00%), Query Frame = 0 

Query: 1  AVRGGQPNPWNILQPQVAKSRHRGA 25
          A+ G QPNPWNILQPQVAKSRHRGA
Sbjct: 63 ALMGEQPNPWNILQPQVAKSRHRGA 87

[Close]
BLAST of MC10g1221 vs. ExPASy TrEMBL
Match: A0A2U1QFV9 (ORF58f OS=Artemisia annua OX=35608 GN=CTI12_AA035350 PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 4.42e-08
Identity = 22/25 (88.00%), Postives = 23/25 (92.00%), Query Frame = 0 

Query: 1  AVRGGQPNPWNILQPQVAKSRHRGA 25
          A+ G QPNPWNILQPQVAKSRHRGA
Sbjct: 16 ALMGEQPNPWNILQPQVAKSRHRGA 40

[Close]
BLAST of MC10g1221 vs. ExPASy TrEMBL
Match: A0A2I0W8Y0 (Uncharacterized protein OS=Dendrobium catenatum OX=906689 GN=MA16_Dca006705 PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 6.90e-08
Identity = 22/25 (88.00%), Postives = 23/25 (92.00%), Query Frame = 0 

Query: 1  AVRGGQPNPWNILQPQVAKSRHRGA 25
          A+ G QPNPWNILQPQVAKSRHRGA
Sbjct: 63 ALMGEQPNPWNILQPQVAKSRHRGA 87

[Close]
BLAST of MC10g1221 vs. ExPASy TrEMBL
Match: A0A2U1NFY8 (Cell wall-associated hydrolase OS=Artemisia annua OX=35608 GN=CTI12_AA270580 PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 9.21e-08
Identity = 22/25 (88.00%), Postives = 23/25 (92.00%), Query Frame = 0 

Query: 1   AVRGGQPNPWNILQPQVAKSRHRGA 25
           A+ G QPNPWNILQPQVAKSRHRGA
Sbjct: 77  ALMGEQPNPWNILQPQVAKSRHRGA 101

[Close]
BLAST of MC10g1221 vs. ExPASy TrEMBL
Match: A0A5E4GMM3 (PREDICTED: cell wall-associated hydrolase OS=Prunus dulcis OX=3755 GN=ALMOND_2B015387 PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 3.45e-07
Identity = 22/25 (88.00%), Postives = 23/25 (92.00%), Query Frame = 0 

Query: 1   AVRGGQPNPWNILQPQVAKSRHRGA 25
           A+ G QPNPWNILQPQVAKSRHRGA
Sbjct: 151 ALMGEQPNPWNILQPQVAKSRHRGA 175

[Close]
BLAST of MC10g1221 vs. ExPASy TrEMBL
Match: A0A6A5MVE8 (Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lal_00033117 PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 3.53e-07
Identity = 22/25 (88.00%), Postives = 23/25 (92.00%), Query Frame = 0 

Query: 1   AVRGGQPNPWNILQPQVAKSRHRGA 25
           A+ G QPNPWNILQPQVAKSRHRGA
Sbjct: 109 ALMGEQPNPWNILQPQVAKSRHRGA 133

The following BLAST results are available for this feature:
BLAST of MC10g1221 vs.
Match NameE-valueIdentityDescription
BLAST of MC10g1221 vs. NCBI nr
Match NameE-valueIdentityDescription
QHO21812.14.87e-0888.00Cell wall-associated hydrolase [Arachis hypogaea][more]
TKY46757.17.77e-0888.00cell wall-associated hydrolase [Spatholobus suberectus][more]
PWA96868.19.13e-0888.00ORF58f [Artemisia annua][more]
QHN92996.11.43e-0788.00uncharacterized protein DS421_17g588840 [Arachis hypogaea][more]
KAF3449752.11.43e-0788.00hypothetical protein FNV43_RR05830 [Rhamnella rubrinervis][more]
BLAST of MC10g1221 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A2U1QFV94.42e-0888.00ORF58f OS=Artemisia annua OX=35608 GN=CTI12_AA035350 PE=4 SV=1[more]
A0A2I0W8Y06.90e-0888.00Uncharacterized protein OS=Dendrobium catenatum OX=906689 GN=MA16_Dca006705 PE=4... [more]
A0A2U1NFY89.21e-0888.00Cell wall-associated hydrolase OS=Artemisia annua OX=35608 GN=CTI12_AA270580 PE=... [more]
A0A5E4GMM33.45e-0788.00PREDICTED: cell wall-associated hydrolase OS=Prunus dulcis OX=3755 GN=ALMOND_2B0... [more]
A0A6A5MVE83.53e-0788.00Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lal_00033117 PE=4 SV=1[more]
BLAST of MC10g1221 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..25

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC10g1221.1MC10g1221.1mRNA