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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATTTGGTTGGAGAGAAACAACTGTACATTCATGGACACACACAAAAGCTTCAATATTCTTTGGGAAGATATCATCATTACTGCCTCAACTTGGTCATCCAAATCTTATTTTTTT mRNA sequence ATTTGGTTGGAGAGAAACAACTGTACATTCATGGACACACACAAAAGCTTCAATATTCTTTGGGAAGATATCATCATTACTGCCTCAACTTGGTCATCCAAATCTTATTTTTTT Coding sequence (CDS) ATTTGGTTGGAGAGAAACAACTGTACATTCATGGACACACACAAAAGCTTCAATATTCTTTGGGAAGATATCATCATTACTGCCTCAACTTGGTCATCCAAATCTTATTTTTTT Protein sequence IWLERNNCTFMDTHKSFNILWEDIIITASTWSSKSYFF
Homology
BLAST of MC10g1209 vs. ExPASy TrEMBL
Match: A0A5A7TIB8 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold206G00430 PE=4 SV=1) HSP 1 Score: 44.3 bits (103), Expect = 9.59e-04 Identity = 20/38 (52.63%), Postives = 21/38 (55.26%), Query Frame = 0
Query: 1 IWLERNNCTFMDTHKSFNILWEDIIITASTWSSKSYFF 38
IWLERNN F K F LWEDI+ WS KS F
Sbjct: 983 IWLERNNRIFKQQKKEFQDLWEDILAQTGLWSCKSKLF 1020
BLAST of MC10g1209 vs. ExPASy TrEMBL
Match: A0A5A7TR15 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G003050 PE=4 SV=1) HSP 1 Score: 44.3 bits (103), Expect = 9.59e-04 Identity = 20/38 (52.63%), Postives = 21/38 (55.26%), Query Frame = 0
Query: 1 IWLERNNCTFMDTHKSFNILWEDIIITASTWSSKSYFF 38
IWLERNN F K F LWEDI+ WS KS F
Sbjct: 889 IWLERNNRIFKQQKKEFQDLWEDILAQTGLWSCKSKLF 926
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
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| A0A5A7TIB8 | 9.59e-04 | 52.63 | LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119... | [more] |
| A0A5A7TR15 | 9.59e-04 | 52.63 | LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119... | [more] |
| Match Name | E-value | Identity | Description | |
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Relationships
The following mRNA feature(s) are a part of this gene:
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