MC10g1088 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC10g1088
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionATP synthase subunit 9, mitochondrial
LocationMC10: 11943942 .. 11944079 (-)
RNA-Seq ExpressionMC10g1088
SyntenyMC10g1088
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TTCAGTTCTTTGATCCATTCTGTGGCGCGAAATCCATCATTGGCTAAACAATCATTTGGTTATGCCATTTTGGACTTTGCTCTAACCGAAGCTATTGCATCCTTTGCCCCCTTCCGTCTTTCTTTTCTTATCAGCTTT

mRNA sequence

TTCAGTTCTTTGATCCATTCTGTGGCGCGAAATCCATCATTGGCTAAACAATCATTTGGTTATGCCATTTTGGACTTTGCTCTAACCGAAGCTATTGCATCCTTTGCCCCCTTCCGTCTTTCTTTTCTTATCAGCTTT

Coding sequence (CDS)

TTCAGTTCTTTGATCCATTCTGTGGCGCGAAATCCATCATTGGCTAAACAATCATTTGGTTATGCCATTTTGGACTTTGCTCTAACCGAAGCTATTGCATCCTTTGCCCCCTTCCGTCTTTCTTTTCTTATCAGCTTT

Protein sequence

FSSLIHSVARNPSLAKQSFGYAILDFALTEAIASFAPFRLSFLISF
Homology
[Close]
BLAST of MC10g1088 vs. ExPASy Swiss-Prot
Match: Q37550 (ATP synthase subunit 9, mitochondrial OS=Malus domestica OX=3750 GN=ATP9 PE=3 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 2.0e-12
Identity = 40/45 (88.89%), Postives = 42/45 (93.33%), Query Frame = 0 

Query: 1  FSSLIHSVARNPSLAKQSFGYAILDFALTEAIASFAPFRLSFLIS 46
          FSSLIHSVARNPSLAKQSFGYAIL FALTEAIASFAP  ++FLIS
Sbjct: 28 FSSLIHSVARNPSLAKQSFGYAILGFALTEAIASFAPM-MAFLIS 71

[Close]
BLAST of MC10g1088 vs. ExPASy Swiss-Prot
Match: P60113 (ATP synthase subunit 9, mitochondrial OS=Brassica napus OX=3708 GN=ATP9 PE=2 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 1.7e-11
Identity = 39/46 (84.78%), Postives = 41/46 (89.13%), Query Frame = 0 

Query: 1  FSSLIHSVARNPSLAKQSFGYAILDFALTEAIASFAPFRLSFLISF 47
          FSSLIHSVARNPSLAKQSFGYAIL FALTEAIA FAP  ++FLI F
Sbjct: 28 FSSLIHSVARNPSLAKQSFGYAILGFALTEAIALFAPM-MAFLILF 72

[Close]
BLAST of MC10g1088 vs. ExPASy Swiss-Prot
Match: P17254 (ATP synthase subunit 9, mitochondrial OS=Helianthus annuus OX=4232 GN=ATP9 PE=3 SV=2)

HSP 1 Score: 67.4 bits (163), Expect = 4.8e-11
Identity = 38/44 (86.36%), Postives = 40/44 (90.91%), Query Frame = 0 

Query: 2  SSLIHSVARNPSLAKQSFGYAILDFALTEAIASFAPFRLSFLIS 46
          SS IHSVARNPSLAKQSFGYAIL FALTEAIASFAP  ++FLIS
Sbjct: 29 SSSIHSVARNPSLAKQSFGYAILGFALTEAIASFAPM-MAFLIS 71

[Close]
BLAST of MC10g1088 vs. ExPASy Swiss-Prot
Match: P60118 (ATP synthase subunit 9, mitochondrial OS=Petunia hybrida OX=4102 GN=ATP9 PE=2 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 1.1e-10
Identity = 38/46 (82.61%), Postives = 40/46 (86.96%), Query Frame = 0 

Query: 1  FSSLIHSVARNPSLAKQSFGYAILDFALTEAIASFAPFRLSFLISF 47
          FSSLIHSVARNPSLAKQ FGYAIL FALTEAIA FA   ++FLISF
Sbjct: 28 FSSLIHSVARNPSLAKQLFGYAILGFALTEAIALFA-LMMAFLISF 72

[Close]
BLAST of MC10g1088 vs. ExPASy Swiss-Prot
Match: P60117 (ATP synthase subunit 9, mitochondrial OS=Solanum lycopersicum OX=4081 GN=ATP9 PE=3 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 1.1e-10
Identity = 38/46 (82.61%), Postives = 40/46 (86.96%), Query Frame = 0 

Query: 1  FSSLIHSVARNPSLAKQSFGYAILDFALTEAIASFAPFRLSFLISF 47
          FSSLIHSVARNPSLAKQ FGYAIL FALTEAIA FA   ++FLISF
Sbjct: 28 FSSLIHSVARNPSLAKQLFGYAILGFALTEAIALFA-LMMAFLISF 72

[Close]
BLAST of MC10g1088 vs. NCBI nr
Match: QYK18959.1 (ATP synthase subunit 9, partial [Anathallis microphyta])

HSP 1 Score: 75.9 bits (185), Expect = 1.18e-16
Identity = 41/46 (89.13%), Postives = 43/46 (93.48%), Query Frame = 0 

Query: 1  FSSLIHSVARNPSLAKQSFGYAILDFALTEAIASFAPFRLSFLISF 46
          FSSLIHSVARNPSLAKQSFGYAIL FALTEAIASFAP  ++FLISF
Sbjct: 8  FSSLIHSVARNPSLAKQSFGYAILGFALTEAIASFAP-MMAFLISF 52

[Close]
BLAST of MC10g1088 vs. NCBI nr
Match: AHF22791.1 (ATP synthase subunit 9, partial [Dasiphora fruticosa subsp. floribunda])

HSP 1 Score: 75.9 bits (185), Expect = 1.34e-16
Identity = 41/46 (89.13%), Postives = 43/46 (93.48%), Query Frame = 0 

Query: 1  FSSLIHSVARNPSLAKQSFGYAILDFALTEAIASFAPFRLSFLISF 46
          FSSLIHSVARNPSLAKQSFGYAIL FALTEAIASFAP  ++FLISF
Sbjct: 28 FSSLIHSVARNPSLAKQSFGYAILGFALTEAIASFAP-MMAFLISF 72

[Close]
BLAST of MC10g1088 vs. NCBI nr
Match: YP_009477477.1 (ATP synthase subunit 9 [Citrus sinensis] >AVW89061.1 ATP synthase subunit 9 [Citrus sinensis])

HSP 1 Score: 75.9 bits (185), Expect = 1.75e-16
Identity = 41/46 (89.13%), Postives = 43/46 (93.48%), Query Frame = 0 

Query: 1  FSSLIHSVARNPSLAKQSFGYAILDFALTEAIASFAPFRLSFLISF 46
          FSSLIHSVARNPSLAKQSFGYAIL FALTEAIASFAP  ++FLISF
Sbjct: 39 FSSLIHSVARNPSLAKQSFGYAILGFALTEAIASFAP-MMAFLISF 83

[Close]
BLAST of MC10g1088 vs. NCBI nr
Match: QYK19090.1 (ATP synthase subunit 9 [Dryadella lilliputiana])

HSP 1 Score: 75.9 bits (185), Expect = 1.99e-16
Identity = 41/46 (89.13%), Postives = 43/46 (93.48%), Query Frame = 0 

Query: 1  FSSLIHSVARNPSLAKQSFGYAILDFALTEAIASFAPFRLSFLISF 46
          FSSLIHSVARNPSLAKQSFGYAIL FALTEAIASFAP  ++FLISF
Sbjct: 28 FSSLIHSVARNPSLAKQSFGYAILGFALTEAIASFAP-MMAFLISF 72

[Close]
BLAST of MC10g1088 vs. NCBI nr
Match: YP_010150787.1 (ATP synthase F0 subunit 9 [Citrus unshiu] >YP_010150822.1 ATP synthase F0 subunit 9 [Citrus maxima] >QQV73123.1 ATP synthase F0 subunit 9 [Citrus unshiu] >QQV73160.1 ATP synthase F0 subunit 9 [Citrus maxima] >QQV73192.1 ATP synthase F0 subunit 9 [Citrus maxima] >GAY68874.1 hypothetical protein CUMW_267540 [Citrus unshiu])

HSP 1 Score: 75.9 bits (185), Expect = 2.33e-16
Identity = 41/46 (89.13%), Postives = 43/46 (93.48%), Query Frame = 0 

Query: 1  FSSLIHSVARNPSLAKQSFGYAILDFALTEAIASFAPFRLSFLISF 46
          FSSLIHSVARNPSLAKQSFGYAIL FALTEAIASFAP  ++FLISF
Sbjct: 39 FSSLIHSVARNPSLAKQSFGYAILGFALTEAIASFAP-MMAFLISF 83

[Close]
BLAST of MC10g1088 vs. ExPASy TrEMBL
Match: A0A0B4L167 (ATP synthase subunit 9, mitochondrial (Fragment) OS=Dasiphora fruticosa subsp. floribunda OX=684368 GN=atp9 PE=3 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 6.50e-17
Identity = 41/46 (89.13%), Postives = 43/46 (93.48%), Query Frame = 0 

Query: 1  FSSLIHSVARNPSLAKQSFGYAILDFALTEAIASFAPFRLSFLISF 46
          FSSLIHSVARNPSLAKQSFGYAIL FALTEAIASFAP  ++FLISF
Sbjct: 28 FSSLIHSVARNPSLAKQSFGYAILGFALTEAIASFAP-MMAFLISF 72

[Close]
BLAST of MC10g1088 vs. ExPASy TrEMBL
Match: A0A2R4LW74 (ATP synthase subunit 9, mitochondrial OS=Citrus sinensis OX=2711 GN=atp9 PE=3 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 8.46e-17
Identity = 41/46 (89.13%), Postives = 43/46 (93.48%), Query Frame = 0 

Query: 1  FSSLIHSVARNPSLAKQSFGYAILDFALTEAIASFAPFRLSFLISF 46
          FSSLIHSVARNPSLAKQSFGYAIL FALTEAIASFAP  ++FLISF
Sbjct: 39 FSSLIHSVARNPSLAKQSFGYAILGFALTEAIASFAP-MMAFLISF 83

[Close]
BLAST of MC10g1088 vs. ExPASy TrEMBL
Match: A0A2H5QW81 (ATP synthase F0 subunit 9 OS=Citrus unshiu OX=55188 GN=atp9 PE=3 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 1.13e-16
Identity = 41/46 (89.13%), Postives = 43/46 (93.48%), Query Frame = 0 

Query: 1  FSSLIHSVARNPSLAKQSFGYAILDFALTEAIASFAPFRLSFLISF 46
          FSSLIHSVARNPSLAKQSFGYAIL FALTEAIASFAP  ++FLISF
Sbjct: 39 FSSLIHSVARNPSLAKQSFGYAILGFALTEAIASFAP-MMAFLISF 83

[Close]
BLAST of MC10g1088 vs. ExPASy TrEMBL
Match: A0A7U0FVF7 (ATP synthase F0 subunit 9 OS=Citrus maxima OX=37334 GN=atp9 PE=4 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 1.13e-16
Identity = 41/46 (89.13%), Postives = 43/46 (93.48%), Query Frame = 0 

Query: 1  FSSLIHSVARNPSLAKQSFGYAILDFALTEAIASFAPFRLSFLISF 46
          FSSLIHSVARNPSLAKQSFGYAIL FALTEAIASFAP  ++FLISF
Sbjct: 39 FSSLIHSVARNPSLAKQSFGYAILGFALTEAIASFAP-MMAFLISF 83

[Close]
BLAST of MC10g1088 vs. ExPASy TrEMBL
Match: A0A7G3UT99 (ATP synthase subunit 9, mitochondrial (Fragment) OS=Pentastemona sumatrana OX=167571 GN=atp9 PE=3 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 2.58e-16
Identity = 40/46 (86.96%), Postives = 42/46 (91.30%), Query Frame = 0 

Query: 1  FSSLIHSVARNPSLAKQSFGYAILDFALTEAIASFAPFRLSFLISF 46
          FSSLIH VARNPSLAKQSFGYAIL FALTEAIASFAP  ++FLISF
Sbjct: 28 FSSLIHGVARNPSLAKQSFGYAILGFALTEAIASFAP-MMAFLISF 72

[Close]
BLAST of MC10g1088 vs. TAIR 10
Match: AT2G07671.1 (ATP synthase subunit C family protein )

HSP 1 Score: 68.9 bits (167), Expect = 1.2e-12
Identity = 39/46 (84.78%), Postives = 41/46 (89.13%), Query Frame = 0 

Query: 1  FSSLIHSVARNPSLAKQSFGYAILDFALTEAIASFAPFRLSFLISF 47
          FSSLIHSVARNPSLAKQSFGYAIL FALTEAIA FAP  ++FLI F
Sbjct: 39 FSSLIHSVARNPSLAKQSFGYAILGFALTEAIALFAPM-MAFLILF 83

[Close]
BLAST of MC10g1088 vs. TAIR 10
Match: ATMG01080.1 (mitochondrial F0-ATPase subunit 9 )

HSP 1 Score: 68.9 bits (167), Expect = 1.2e-12
Identity = 39/46 (84.78%), Postives = 41/46 (89.13%), Query Frame = 0 

Query: 1  FSSLIHSVARNPSLAKQSFGYAILDFALTEAIASFAPFRLSFLISF 47
          FSSLIHSVARNPSLAKQSFGYAIL FALTEAIA FAP  ++FLI F
Sbjct: 39 FSSLIHSVARNPSLAKQSFGYAILGFALTEAIALFAPM-MAFLILF 83

The following BLAST results are available for this feature:
BLAST of MC10g1088 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q375502.0e-1288.89ATP synthase subunit 9, mitochondrial OS=Malus domestica OX=3750 GN=ATP9 PE=3 SV... [more]
P601131.7e-1184.78ATP synthase subunit 9, mitochondrial OS=Brassica napus OX=3708 GN=ATP9 PE=2 SV=... [more]
P172544.8e-1186.36ATP synthase subunit 9, mitochondrial OS=Helianthus annuus OX=4232 GN=ATP9 PE=3 ... [more]
P601181.1e-1082.61ATP synthase subunit 9, mitochondrial OS=Petunia hybrida OX=4102 GN=ATP9 PE=2 SV... [more]
P601171.1e-1082.61ATP synthase subunit 9, mitochondrial OS=Solanum lycopersicum OX=4081 GN=ATP9 PE... [more]
BLAST of MC10g1088 vs. NCBI nr
Match NameE-valueIdentityDescription
QYK18959.11.18e-1689.13ATP synthase subunit 9, partial [Anathallis microphyta][more]
AHF22791.11.34e-1689.13ATP synthase subunit 9, partial [Dasiphora fruticosa subsp. floribunda][more]
YP_009477477.11.75e-1689.13ATP synthase subunit 9 [Citrus sinensis] >AVW89061.1 ATP synthase subunit 9 [Cit... [more]
QYK19090.11.99e-1689.13ATP synthase subunit 9 [Dryadella lilliputiana][more]
YP_010150787.12.33e-1689.13ATP synthase F0 subunit 9 [Citrus unshiu] >YP_010150822.1 ATP synthase F0 subuni... [more]
BLAST of MC10g1088 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0B4L1676.50e-1789.13ATP synthase subunit 9, mitochondrial (Fragment) OS=Dasiphora fruticosa subsp. f... [more]
A0A2R4LW748.46e-1789.13ATP synthase subunit 9, mitochondrial OS=Citrus sinensis OX=2711 GN=atp9 PE=3 SV... [more]
A0A2H5QW811.13e-1689.13ATP synthase F0 subunit 9 OS=Citrus unshiu OX=55188 GN=atp9 PE=3 SV=1[more]
A0A7U0FVF71.13e-1689.13ATP synthase F0 subunit 9 OS=Citrus maxima OX=37334 GN=atp9 PE=4 SV=1[more]
A0A7G3UT992.58e-1686.96ATP synthase subunit 9, mitochondrial (Fragment) OS=Pentastemona sumatrana OX=16... [more]
BLAST of MC10g1088 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G07671.11.2e-1284.78ATP synthase subunit C family protein [more]
ATMG01080.11.2e-1284.78mitochondrial F0-ATPase subunit 9 [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000454ATP synthase, F0 complex, subunit CPRINTSPR00124ATPASECcoord: 19..44
score: 38.46
coord: 2..17
score: 50.37
IPR000454ATP synthase, F0 complex, subunit CPANTHERPTHR10031ATP SYNTHASE LIPID-BINDING PROTEIN, MITOCHONDRIALcoord: 1..46
IPR038662F1F0 ATP synthase subunit C superfamilyGENE3D1.20.20.10F1F0 ATP synthase subunit Ccoord: 1..46
e-value: 2.3E-12
score: 48.8
NoneNo IPR availablePANTHERPTHR10031:SF38ATP SYNTHASE SUBUNIT 9, MITOCHONDRIALcoord: 1..46
IPR020537ATP synthase, F0 complex, subunit C, DCCD-binding sitePROSITEPS00605ATPASE_Ccoord: 9..30
IPR035921F/V-ATP synthase subunit C superfamilySUPERFAMILY81333F1F0 ATP synthase subunit Ccoord: 1..36

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC10g1088.1MC10g1088.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015986 ATP synthesis coupled proton transport
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)
cellular_component GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o)
molecular_function GO:0005524 ATP binding
molecular_function GO:0008289 lipid binding
molecular_function GO:0015078 proton transmembrane transporter activity