MC10g1074 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC10g1074
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionglycine-rich protein 5
LocationMC10: 11470393 .. 11470845 (-)
RNA-Seq ExpressionMC10g1074
SyntenyMC10g1074
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCCAAGATTCTCTTTCTTGTGCTTCTTTCTGCTTTTCTCTGCACCACTTCTTGGGCTCGAAAGCTCACTACTACCTCTTTTCACGACCAGAAATTCTTCCACCGTCCCGGATTTGGCGGTGGTGGAGGCGGTGGAGGGTTCGGCGGAGGCGGCGGTGGAGGGCTAGGCGGTGGTTTTGGTGGAGGATCTGGATTTGGCGGAGGCGCTGGCGGTGGTGCCGGTGGTGGTGCTGGAGGTGGGTTCGGAGGAGGAGGTGGCGGTGGACTAGGAGGAGGTGGTGGCATTGGTGGCGGAGCTGGTGGCGGGTTCGGAGGAGGGGCCGGTGCAGGAGGAGGACTTGGTGGTGGCGGTGGAGCTGGAGGAGGTGGAGGTTTTGGTGGCGGCAGCGGAGGTGGACTTGGGGGTGGCAGTGGGTTCGGAGGAGGCGCCGGTGCCGGAGGTGGATTT

mRNA sequence

ATGGCTTCCAAGATTCTCTTTCTTGTGCTTCTTTCTGCTTTTCTCTGCACCACTTCTTGGGCTCGAAAGCTCACTACTACCTCTTTTCACGACCAGAAATTCTTCCACCGTCCCGGATTTGGCGGTGGTGGAGGCGGTGGAGGGTTCGGCGGAGGCGGCGGTGGAGGGCTAGGCGGTGGTTTTGGTGGAGGATCTGGATTTGGCGGAGGCGCTGGCGGTGGTGCCGGTGGTGGTGCTGGAGGTGGGTTCGGAGGAGGAGGTGGCGGTGGACTAGGAGGAGGTGGTGGCATTGGTGGCGGAGCTGGTGGCGGGTTCGGAGGAGGGGCCGGTGCAGGAGGAGGACTTGGTGGTGGCGGTGGAGCTGGAGGAGGTGGAGGTTTTGGTGGCGGCAGCGGAGGTGGACTTGGGGGTGGCAGTGGGTTCGGAGGAGGCGCCGGTGCCGGAGGTGGATTT

Coding sequence (CDS)

ATGGCTTCCAAGATTCTCTTTCTTGTGCTTCTTTCTGCTTTTCTCTGCACCACTTCTTGGGCTCGAAAGCTCACTACTACCTCTTTTCACGACCAGAAATTCTTCCACCGTCCCGGATTTGGCGGTGGTGGAGGCGGTGGAGGGTTCGGCGGAGGCGGCGGTGGAGGGCTAGGCGGTGGTTTTGGTGGAGGATCTGGATTTGGCGGAGGCGCTGGCGGTGGTGCCGGTGGTGGTGCTGGAGGTGGGTTCGGAGGAGGAGGTGGCGGTGGACTAGGAGGAGGTGGTGGCATTGGTGGCGGAGCTGGTGGCGGGTTCGGAGGAGGGGCCGGTGCAGGAGGAGGACTTGGTGGTGGCGGTGGAGCTGGAGGAGGTGGAGGTTTTGGTGGCGGCAGCGGAGGTGGACTTGGGGGTGGCAGTGGGTTCGGAGGAGGCGCCGGTGCCGGAGGTGGATTT

Protein sequence

MASKILFLVLLSAFLCTTSWARKLTTTSFHDQKFFHRPGFGGGGGGGGFGGGGGGGLGGGFGGGSGFGGGAGGGAGGGAGGGFGGGGGGGLGGGGGIGGGAGGGFGGGAGAGGGLGGGGGAGGGGGFGGGSGGGLGGGSGFGGGAGAGGGF
Homology
BLAST of MC10g1074 vs. NCBI nr
Match: XP_022151305.1 (glycine-rich protein 5 [Momordica charantia])

HSP 1 Score: 143 bits (360), Expect = 2.13e-40
Identity = 149/151 (98.68%), Postives = 149/151 (98.68%), Query Frame = 0

Query: 1   MASKILFLVLLSAFLCTTSWARKLTTTSFHDQKFFHRPGFGGGGGGGGFGGGGGGGLGGG 60
           MASKILFLVLLSAFLCTTSWARKLTTTSFHDQKFFHRPGFGGGGGGGGFGGGGGGGLGGG
Sbjct: 1   MASKILFLVLLSAFLCTTSWARKLTTTSFHDQKFFHRPGFGGGGGGGGFGGGGGGGLGGG 60

Query: 61  FGGGSGFGGGAGGGAGGGAGGGFGGGGGGGLGGGGGIGGGAGGGFGGGAGAGGGLGGGGG 120
           FGGGSGFGGGAGGGAGGGAGGGFGGGGGG LGGGGGIGGGAGGGFGGGAGAGGGLGGGGG
Sbjct: 61  FGGGSGFGGGAGGGAGGGAGGGFGGGGGG-LGGGGGIGGGAGGGFGGGAGAGGGLGGGGG 120

Query: 121 AGGGGGFGGGSGGGLGGGSGFGGGAGAGGGF 151
           AGGGGGFGGG GGGLGGGSGFGGGAGAGGGF
Sbjct: 121 AGGGGGFGGGRGGGLGGGSGFGGGAGAGGGF 150

BLAST of MC10g1074 vs. NCBI nr
Match: KAA0065825.1 (glycine-rich cell wall structural protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 86.7 bits (213), Expect = 3.50e-18
Identity = 128/161 (79.50%), Postives = 134/161 (83.23%), Query Frame = 0

Query: 1   MASKILFLVLLSAFLCTTSWARKLTTTSFHDQKFFHRPGFGGGG----GGGGFGGGGGGG 60
           MASKI+FLV L AFL TTS ARKL+T SF D+KFFHRP +GGGG    GGGGFGGGGGGG
Sbjct: 1   MASKIVFLVFLGAFLFTTSGARKLSTASFQDEKFFHRPRYGGGGLGGGGGGGFGGGGGGG 60

Query: 61  LGGG----FGGGSGFGGGAGGGAGGGAGGGFGGGGGGGLGGGGGIGGGAGGGFGGGAGAG 120
           LGGG    FGGGSGFGGG GGGAGGG GGGFGGGGGGGLGGG G GGGAG  FGGG+G G
Sbjct: 61  LGGGSGGGFGGGSGFGGGVGGGAGGGGGGGFGGGGGGGLGGGSGFGGGAG--FGGGSGGG 120

Query: 121 GGLGGGGGAGGGGGFGGGSGGGLGGGSG--FGGGAGAGGGF 151
           GGLGGGGGAGGGGGFGGG GGGLGGG+G  FG GAG GGGF
Sbjct: 121 GGLGGGGGAGGGGGFGGGGGGGLGGGAGGGFGSGAGTGGGF 159

BLAST of MC10g1074 vs. NCBI nr
Match: XP_011650511.1 (glycine-rich cell wall structural protein-like [Cucumis sativus])

HSP 1 Score: 82.4 bits (202), Expect = 1.46e-16
Identity = 128/161 (79.50%), Postives = 134/161 (83.23%), Query Frame = 0

Query: 1   MASKILFLVLLSAFLCTTSWARKLTTTSFHDQKFFHRPGFGGGG----GGGGFGGGGGGG 60
           MASKI+FLV L AFL +TS ARKL+T SF D+KFF RP FGGGG    GGGGFGGGGGGG
Sbjct: 1   MASKIVFLVFLGAFLFSTSGARKLSTASFQDEKFFRRPRFGGGGLGGGGGGGFGGGGGGG 60

Query: 61  LGGG----FGGGSGFGGGAGGGAGGGAGGGFGGGGGGGLGGGGGIGGGAGGGFGGGAGAG 120
           LGGG    FGGGSGFGGG GGGAGGG GGGFGGGGGGGLGGG G GGGAG  FGGG+G  
Sbjct: 61  LGGGSGGGFGGGSGFGGGVGGGAGGGGGGGFGGGGGGGLGGGSGFGGGAG--FGGGSG-- 120

Query: 121 GGLGGGGGAGGGGGFGGGSGGGLGGGSG--FGGGAGAGGGF 151
           GGLGGGGGAGGGGGFGGG GGGLGGG+G  FGGGAGAGGGF
Sbjct: 121 GGLGGGGGAGGGGGFGGGGGGGLGGGAGGGFGGGAGAGGGF 157

BLAST of MC10g1074 vs. NCBI nr
Match: KAA0065824.1 (glycine-rich cell wall structural protein-like [Cucumis melo var. makuwa] >TYJ96563.1 glycine-rich cell wall structural protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 78.2 bits (191), Expect = 6.05e-15
Identity = 124/161 (77.02%), Postives = 132/161 (81.99%), Query Frame = 0

Query: 1   MASKILFLVLLSAFLCTTSWARKLTTTSFHDQKFFHRPGFGGGG----GGGGFGGGGGGG 60
           MASKI+FLV L AFL +TS ARKL+T SF D+KFFHRP FGGGG    GGGGFGGGGGGG
Sbjct: 1   MASKIVFLVFLGAFLFSTSGARKLSTASFQDEKFFHRPRFGGGGLGGGGGGGFGGGGGGG 60

Query: 61  LGGG----FGGGSGFGGGAGGGAGGGAGGGFGGGGGGGLGGGGGIGGGAGGGFGGGAGAG 120
           LGGG    FGGGSGFGGG GGGAGGG G  FGGGGGGG+GGG G GGGAG  FGGG+G G
Sbjct: 61  LGGGSGGGFGGGSGFGGGVGGGAGGGGG--FGGGGGGGIGGGSGFGGGAG--FGGGSGGG 120

Query: 121 GGLGGGGGAGGGGGFGGGSGGGLGGGSG--FGGGAGAGGGF 151
           GGLGGG  AGGGGGFGGG GGGLGGG+G  FGGGAGAGGG+
Sbjct: 121 GGLGGG--AGGGGGFGGGGGGGLGGGAGGGFGGGAGAGGGY 155

BLAST of MC10g1074 vs. NCBI nr
Match: XP_024437755.1 (glycine-rich protein 23-like [Populus trichocarpa] >PNT52256.1 hypothetical protein POPTR_001G021300 [Populus trichocarpa])

HSP 1 Score: 65.1 bits (157), Expect = 6.18e-10
Identity = 120/155 (77.42%), Postives = 128/155 (82.58%), Query Frame = 0

Query: 1   MASKILFLVLLSAFLCTTSWARKLTTT---SFHDQK-FFHRPGFGGG-GGGGGFGGGGGG 60
           MASK+L L+L SA +C+TS ARKL  T   SF D+K  FHRPGFGGG GGGGGFGGGGGG
Sbjct: 1   MASKLLLLLLFSALVCSTS-ARKLVGTEKGSFEDEKNLFHRPGFGGGAGGGGGFGGGGGG 60

Query: 61  GLGGGFGGGSGFGGGAGGGAGGGAGGGFGGGGGGGLGGGGGIGGGAGGGFGGGAGAGGGL 120
           GLGGG    +GFGGGAGGGAGGG GGG GGGGG G GGGGG+GGGAGGGFGGGAGAGGGL
Sbjct: 61  GLGGG----AGFGGGAGGGAGGGLGGGAGGGGGFGGGGGGGVGGGAGGGFGGGAGAGGGL 120

Query: 121 GGGGGAGGGGGFGGGSGGGLGGGSG--FGGGAGAG 148
           GGG  AGGGGGFGGG GGGLGGG+G  FGGGAG G
Sbjct: 121 GGG--AGGGGGFGGGGGGGLGGGAGGGFGGGAGGG 148

BLAST of MC10g1074 vs. ExPASy TrEMBL
Match: A0A6J1DAT8 (glycine-rich protein 5 OS=Momordica charantia OX=3673 GN=LOC111019269 PE=4 SV=1)

HSP 1 Score: 143 bits (360), Expect = 1.03e-40
Identity = 149/151 (98.68%), Postives = 149/151 (98.68%), Query Frame = 0

Query: 1   MASKILFLVLLSAFLCTTSWARKLTTTSFHDQKFFHRPGFGGGGGGGGFGGGGGGGLGGG 60
           MASKILFLVLLSAFLCTTSWARKLTTTSFHDQKFFHRPGFGGGGGGGGFGGGGGGGLGGG
Sbjct: 1   MASKILFLVLLSAFLCTTSWARKLTTTSFHDQKFFHRPGFGGGGGGGGFGGGGGGGLGGG 60

Query: 61  FGGGSGFGGGAGGGAGGGAGGGFGGGGGGGLGGGGGIGGGAGGGFGGGAGAGGGLGGGGG 120
           FGGGSGFGGGAGGGAGGGAGGGFGGGGGG LGGGGGIGGGAGGGFGGGAGAGGGLGGGGG
Sbjct: 61  FGGGSGFGGGAGGGAGGGAGGGFGGGGGG-LGGGGGIGGGAGGGFGGGAGAGGGLGGGGG 120

Query: 121 AGGGGGFGGGSGGGLGGGSGFGGGAGAGGGF 151
           AGGGGGFGGG GGGLGGGSGFGGGAGAGGGF
Sbjct: 121 AGGGGGFGGGRGGGLGGGSGFGGGAGAGGGF 150

BLAST of MC10g1074 vs. ExPASy TrEMBL
Match: A0A5A7VJD1 (Glycine-rich cell wall structural protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold37G001320 PE=4 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 1.69e-18
Identity = 128/161 (79.50%), Postives = 134/161 (83.23%), Query Frame = 0

Query: 1   MASKILFLVLLSAFLCTTSWARKLTTTSFHDQKFFHRPGFGGGG----GGGGFGGGGGGG 60
           MASKI+FLV L AFL TTS ARKL+T SF D+KFFHRP +GGGG    GGGGFGGGGGGG
Sbjct: 1   MASKIVFLVFLGAFLFTTSGARKLSTASFQDEKFFHRPRYGGGGLGGGGGGGFGGGGGGG 60

Query: 61  LGGG----FGGGSGFGGGAGGGAGGGAGGGFGGGGGGGLGGGGGIGGGAGGGFGGGAGAG 120
           LGGG    FGGGSGFGGG GGGAGGG GGGFGGGGGGGLGGG G GGGAG  FGGG+G G
Sbjct: 61  LGGGSGGGFGGGSGFGGGVGGGAGGGGGGGFGGGGGGGLGGGSGFGGGAG--FGGGSGGG 120

Query: 121 GGLGGGGGAGGGGGFGGGSGGGLGGGSG--FGGGAGAGGGF 151
           GGLGGGGGAGGGGGFGGG GGGLGGG+G  FG GAG GGGF
Sbjct: 121 GGLGGGGGAGGGGGFGGGGGGGLGGGAGGGFGSGAGTGGGF 159

BLAST of MC10g1074 vs. ExPASy TrEMBL
Match: A0A5D3BB90 (Glycine-rich cell wall structural protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G002250 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 2.93e-15
Identity = 124/161 (77.02%), Postives = 132/161 (81.99%), Query Frame = 0

Query: 1   MASKILFLVLLSAFLCTTSWARKLTTTSFHDQKFFHRPGFGGGG----GGGGFGGGGGGG 60
           MASKI+FLV L AFL +TS ARKL+T SF D+KFFHRP FGGGG    GGGGFGGGGGGG
Sbjct: 1   MASKIVFLVFLGAFLFSTSGARKLSTASFQDEKFFHRPRFGGGGLGGGGGGGFGGGGGGG 60

Query: 61  LGGG----FGGGSGFGGGAGGGAGGGAGGGFGGGGGGGLGGGGGIGGGAGGGFGGGAGAG 120
           LGGG    FGGGSGFGGG GGGAGGG G  FGGGGGGG+GGG G GGGAG  FGGG+G G
Sbjct: 61  LGGGSGGGFGGGSGFGGGVGGGAGGGGG--FGGGGGGGIGGGSGFGGGAG--FGGGSGGG 120

Query: 121 GGLGGGGGAGGGGGFGGGSGGGLGGGSG--FGGGAGAGGGF 151
           GGLGGG  AGGGGGFGGG GGGLGGG+G  FGGGAGAGGG+
Sbjct: 121 GGLGGG--AGGGGGFGGGGGGGLGGGAGGGFGGGAGAGGGY 155

BLAST of MC10g1074 vs. ExPASy TrEMBL
Match: A0A0A0L2A7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G064240 PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 2.27e-12
Identity = 77/99 (77.78%), Postives = 81/99 (81.82%), Query Frame = 0

Query: 1  MASKILFLVLLSAFLCTTSWARKLTTTSFHDQKFFHRPGFGGGG----GGGGFGGGGGGG 60
          MASKI+FLV L AFL +TS ARKL+T SF D+KFF RP FGGGG    GGGGFGGGGGGG
Sbjct: 1  MASKIVFLVFLGAFLFSTSGARKLSTASFQDEKFFRRPRFGGGGLGGGGGGGFGGGGGGG 60

Query: 61 LGGG----FGGGSGFGGGAGGGAGGGAGGGFGGGGGGGL 91
          LGGG    FGGGSGFGGG GGGAGGG GGGFGGGGGGGL
Sbjct: 61 LGGGSGGGFGGGSGFGGGVGGGAGGGGGGGFGGGGGGGL 99

BLAST of MC10g1074 vs. ExPASy TrEMBL
Match: A0A2K2BR58 (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_001G021300 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 2.99e-10
Identity = 120/155 (77.42%), Postives = 128/155 (82.58%), Query Frame = 0

Query: 1   MASKILFLVLLSAFLCTTSWARKLTTT---SFHDQK-FFHRPGFGGG-GGGGGFGGGGGG 60
           MASK+L L+L SA +C+TS ARKL  T   SF D+K  FHRPGFGGG GGGGGFGGGGGG
Sbjct: 1   MASKLLLLLLFSALVCSTS-ARKLVGTEKGSFEDEKNLFHRPGFGGGAGGGGGFGGGGGG 60

Query: 61  GLGGGFGGGSGFGGGAGGGAGGGAGGGFGGGGGGGLGGGGGIGGGAGGGFGGGAGAGGGL 120
           GLGGG    +GFGGGAGGGAGGG GGG GGGGG G GGGGG+GGGAGGGFGGGAGAGGGL
Sbjct: 61  GLGGG----AGFGGGAGGGAGGGLGGGAGGGGGFGGGGGGGVGGGAGGGFGGGAGAGGGL 120

Query: 121 GGGGGAGGGGGFGGGSGGGLGGGSG--FGGGAGAG 148
           GGG  AGGGGGFGGG GGGLGGG+G  FGGGAG G
Sbjct: 121 GGG--AGGGGGFGGGGGGGLGGGAGGGFGGGAGGG 148

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_022151305.12.13e-4098.68glycine-rich protein 5 [Momordica charantia][more]
KAA0065825.13.50e-1879.50glycine-rich cell wall structural protein-like [Cucumis melo var. makuwa][more]
XP_011650511.11.46e-1679.50glycine-rich cell wall structural protein-like [Cucumis sativus][more]
KAA0065824.16.05e-1577.02glycine-rich cell wall structural protein-like [Cucumis melo var. makuwa] >TYJ96... [more]
XP_024437755.16.18e-1077.42glycine-rich protein 23-like [Populus trichocarpa] >PNT52256.1 hypothetical prot... [more]
Match NameE-valueIdentityDescription
A0A6J1DAT81.03e-4098.68glycine-rich protein 5 OS=Momordica charantia OX=3673 GN=LOC111019269 PE=4 SV=1[more]
A0A5A7VJD11.69e-1879.50Glycine-rich cell wall structural protein-like OS=Cucumis melo var. makuwa OX=11... [more]
A0A5D3BB902.93e-1577.02Glycine-rich cell wall structural protein-like OS=Cucumis melo var. makuwa OX=11... [more]
A0A0A0L2A72.27e-1277.78Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G064240 PE=4 SV=1[more]
A0A2K2BR582.99e-1077.42Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_001G021300 PE=4 ... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR01228EGGSHELLcoord: 142..151
score: 30.92
coord: 3..19
score: 33.09
coord: 91..106
score: 57.81
coord: 116..126
score: 45.45

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC10g1074.1MC10g1074.1mRNA