Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCCAAGATTCTCTTTCTTGTGCTTCTTTCTGCTTTTCTCTGCACCACTTCTTGGGCTCGAAAGCTCACTACTACCTCTTTTCACGACCAGAAATTCTTCCACCGTCCCGGATTTGGCGGTGGTGGAGGCGGTGGAGGGTTCGGCGGAGGCGGCGGTGGAGGGCTAGGCGGTGGTTTTGGTGGAGGATCTGGATTTGGCGGAGGCGCTGGCGGTGGTGCCGGTGGTGGTGCTGGAGGTGGGTTCGGAGGAGGAGGTGGCGGTGGACTAGGAGGAGGTGGTGGCATTGGTGGCGGAGCTGGTGGCGGGTTCGGAGGAGGGGCCGGTGCAGGAGGAGGACTTGGTGGTGGCGGTGGAGCTGGAGGAGGTGGAGGTTTTGGTGGCGGCAGCGGAGGTGGACTTGGGGGTGGCAGTGGGTTCGGAGGAGGCGCCGGTGCCGGAGGTGGATTT
mRNA sequence
ATGGCTTCCAAGATTCTCTTTCTTGTGCTTCTTTCTGCTTTTCTCTGCACCACTTCTTGGGCTCGAAAGCTCACTACTACCTCTTTTCACGACCAGAAATTCTTCCACCGTCCCGGATTTGGCGGTGGTGGAGGCGGTGGAGGGTTCGGCGGAGGCGGCGGTGGAGGGCTAGGCGGTGGTTTTGGTGGAGGATCTGGATTTGGCGGAGGCGCTGGCGGTGGTGCCGGTGGTGGTGCTGGAGGTGGGTTCGGAGGAGGAGGTGGCGGTGGACTAGGAGGAGGTGGTGGCATTGGTGGCGGAGCTGGTGGCGGGTTCGGAGGAGGGGCCGGTGCAGGAGGAGGACTTGGTGGTGGCGGTGGAGCTGGAGGAGGTGGAGGTTTTGGTGGCGGCAGCGGAGGTGGACTTGGGGGTGGCAGTGGGTTCGGAGGAGGCGCCGGTGCCGGAGGTGGATTT
Coding sequence (CDS)
ATGGCTTCCAAGATTCTCTTTCTTGTGCTTCTTTCTGCTTTTCTCTGCACCACTTCTTGGGCTCGAAAGCTCACTACTACCTCTTTTCACGACCAGAAATTCTTCCACCGTCCCGGATTTGGCGGTGGTGGAGGCGGTGGAGGGTTCGGCGGAGGCGGCGGTGGAGGGCTAGGCGGTGGTTTTGGTGGAGGATCTGGATTTGGCGGAGGCGCTGGCGGTGGTGCCGGTGGTGGTGCTGGAGGTGGGTTCGGAGGAGGAGGTGGCGGTGGACTAGGAGGAGGTGGTGGCATTGGTGGCGGAGCTGGTGGCGGGTTCGGAGGAGGGGCCGGTGCAGGAGGAGGACTTGGTGGTGGCGGTGGAGCTGGAGGAGGTGGAGGTTTTGGTGGCGGCAGCGGAGGTGGACTTGGGGGTGGCAGTGGGTTCGGAGGAGGCGCCGGTGCCGGAGGTGGATTT
Protein sequence
MASKILFLVLLSAFLCTTSWARKLTTTSFHDQKFFHRPGFGGGGGGGGFGGGGGGGLGGGFGGGSGFGGGAGGGAGGGAGGGFGGGGGGGLGGGGGIGGGAGGGFGGGAGAGGGLGGGGGAGGGGGFGGGSGGGLGGGSGFGGGAGAGGGF
Homology
BLAST of MC10g1074 vs. NCBI nr
Match:
XP_022151305.1 (glycine-rich protein 5 [Momordica charantia])
HSP 1 Score: 143 bits (360), Expect = 2.13e-40
Identity = 149/151 (98.68%), Postives = 149/151 (98.68%), Query Frame = 0
Query: 1 MASKILFLVLLSAFLCTTSWARKLTTTSFHDQKFFHRPGFGGGGGGGGFGGGGGGGLGGG 60
MASKILFLVLLSAFLCTTSWARKLTTTSFHDQKFFHRPGFGGGGGGGGFGGGGGGGLGGG
Sbjct: 1 MASKILFLVLLSAFLCTTSWARKLTTTSFHDQKFFHRPGFGGGGGGGGFGGGGGGGLGGG 60
Query: 61 FGGGSGFGGGAGGGAGGGAGGGFGGGGGGGLGGGGGIGGGAGGGFGGGAGAGGGLGGGGG 120
FGGGSGFGGGAGGGAGGGAGGGFGGGGGG LGGGGGIGGGAGGGFGGGAGAGGGLGGGGG
Sbjct: 61 FGGGSGFGGGAGGGAGGGAGGGFGGGGGG-LGGGGGIGGGAGGGFGGGAGAGGGLGGGGG 120
Query: 121 AGGGGGFGGGSGGGLGGGSGFGGGAGAGGGF 151
AGGGGGFGGG GGGLGGGSGFGGGAGAGGGF
Sbjct: 121 AGGGGGFGGGRGGGLGGGSGFGGGAGAGGGF 150
BLAST of MC10g1074 vs. NCBI nr
Match:
KAA0065825.1 (glycine-rich cell wall structural protein-like [Cucumis melo var. makuwa])
HSP 1 Score: 86.7 bits (213), Expect = 3.50e-18
Identity = 128/161 (79.50%), Postives = 134/161 (83.23%), Query Frame = 0
Query: 1 MASKILFLVLLSAFLCTTSWARKLTTTSFHDQKFFHRPGFGGGG----GGGGFGGGGGGG 60
MASKI+FLV L AFL TTS ARKL+T SF D+KFFHRP +GGGG GGGGFGGGGGGG
Sbjct: 1 MASKIVFLVFLGAFLFTTSGARKLSTASFQDEKFFHRPRYGGGGLGGGGGGGFGGGGGGG 60
Query: 61 LGGG----FGGGSGFGGGAGGGAGGGAGGGFGGGGGGGLGGGGGIGGGAGGGFGGGAGAG 120
LGGG FGGGSGFGGG GGGAGGG GGGFGGGGGGGLGGG G GGGAG FGGG+G G
Sbjct: 61 LGGGSGGGFGGGSGFGGGVGGGAGGGGGGGFGGGGGGGLGGGSGFGGGAG--FGGGSGGG 120
Query: 121 GGLGGGGGAGGGGGFGGGSGGGLGGGSG--FGGGAGAGGGF 151
GGLGGGGGAGGGGGFGGG GGGLGGG+G FG GAG GGGF
Sbjct: 121 GGLGGGGGAGGGGGFGGGGGGGLGGGAGGGFGSGAGTGGGF 159
BLAST of MC10g1074 vs. NCBI nr
Match:
XP_011650511.1 (glycine-rich cell wall structural protein-like [Cucumis sativus])
HSP 1 Score: 82.4 bits (202), Expect = 1.46e-16
Identity = 128/161 (79.50%), Postives = 134/161 (83.23%), Query Frame = 0
Query: 1 MASKILFLVLLSAFLCTTSWARKLTTTSFHDQKFFHRPGFGGGG----GGGGFGGGGGGG 60
MASKI+FLV L AFL +TS ARKL+T SF D+KFF RP FGGGG GGGGFGGGGGGG
Sbjct: 1 MASKIVFLVFLGAFLFSTSGARKLSTASFQDEKFFRRPRFGGGGLGGGGGGGFGGGGGGG 60
Query: 61 LGGG----FGGGSGFGGGAGGGAGGGAGGGFGGGGGGGLGGGGGIGGGAGGGFGGGAGAG 120
LGGG FGGGSGFGGG GGGAGGG GGGFGGGGGGGLGGG G GGGAG FGGG+G
Sbjct: 61 LGGGSGGGFGGGSGFGGGVGGGAGGGGGGGFGGGGGGGLGGGSGFGGGAG--FGGGSG-- 120
Query: 121 GGLGGGGGAGGGGGFGGGSGGGLGGGSG--FGGGAGAGGGF 151
GGLGGGGGAGGGGGFGGG GGGLGGG+G FGGGAGAGGGF
Sbjct: 121 GGLGGGGGAGGGGGFGGGGGGGLGGGAGGGFGGGAGAGGGF 157
BLAST of MC10g1074 vs. NCBI nr
Match:
KAA0065824.1 (glycine-rich cell wall structural protein-like [Cucumis melo var. makuwa] >TYJ96563.1 glycine-rich cell wall structural protein-like [Cucumis melo var. makuwa])
HSP 1 Score: 78.2 bits (191), Expect = 6.05e-15
Identity = 124/161 (77.02%), Postives = 132/161 (81.99%), Query Frame = 0
Query: 1 MASKILFLVLLSAFLCTTSWARKLTTTSFHDQKFFHRPGFGGGG----GGGGFGGGGGGG 60
MASKI+FLV L AFL +TS ARKL+T SF D+KFFHRP FGGGG GGGGFGGGGGGG
Sbjct: 1 MASKIVFLVFLGAFLFSTSGARKLSTASFQDEKFFHRPRFGGGGLGGGGGGGFGGGGGGG 60
Query: 61 LGGG----FGGGSGFGGGAGGGAGGGAGGGFGGGGGGGLGGGGGIGGGAGGGFGGGAGAG 120
LGGG FGGGSGFGGG GGGAGGG G FGGGGGGG+GGG G GGGAG FGGG+G G
Sbjct: 61 LGGGSGGGFGGGSGFGGGVGGGAGGGGG--FGGGGGGGIGGGSGFGGGAG--FGGGSGGG 120
Query: 121 GGLGGGGGAGGGGGFGGGSGGGLGGGSG--FGGGAGAGGGF 151
GGLGGG AGGGGGFGGG GGGLGGG+G FGGGAGAGGG+
Sbjct: 121 GGLGGG--AGGGGGFGGGGGGGLGGGAGGGFGGGAGAGGGY 155
BLAST of MC10g1074 vs. NCBI nr
Match:
XP_024437755.1 (glycine-rich protein 23-like [Populus trichocarpa] >PNT52256.1 hypothetical protein POPTR_001G021300 [Populus trichocarpa])
HSP 1 Score: 65.1 bits (157), Expect = 6.18e-10
Identity = 120/155 (77.42%), Postives = 128/155 (82.58%), Query Frame = 0
Query: 1 MASKILFLVLLSAFLCTTSWARKLTTT---SFHDQK-FFHRPGFGGG-GGGGGFGGGGGG 60
MASK+L L+L SA +C+TS ARKL T SF D+K FHRPGFGGG GGGGGFGGGGGG
Sbjct: 1 MASKLLLLLLFSALVCSTS-ARKLVGTEKGSFEDEKNLFHRPGFGGGAGGGGGFGGGGGG 60
Query: 61 GLGGGFGGGSGFGGGAGGGAGGGAGGGFGGGGGGGLGGGGGIGGGAGGGFGGGAGAGGGL 120
GLGGG +GFGGGAGGGAGGG GGG GGGGG G GGGGG+GGGAGGGFGGGAGAGGGL
Sbjct: 61 GLGGG----AGFGGGAGGGAGGGLGGGAGGGGGFGGGGGGGVGGGAGGGFGGGAGAGGGL 120
Query: 121 GGGGGAGGGGGFGGGSGGGLGGGSG--FGGGAGAG 148
GGG AGGGGGFGGG GGGLGGG+G FGGGAG G
Sbjct: 121 GGG--AGGGGGFGGGGGGGLGGGAGGGFGGGAGGG 148
BLAST of MC10g1074 vs. ExPASy TrEMBL
Match:
A0A6J1DAT8 (glycine-rich protein 5 OS=Momordica charantia OX=3673 GN=LOC111019269 PE=4 SV=1)
HSP 1 Score: 143 bits (360), Expect = 1.03e-40
Identity = 149/151 (98.68%), Postives = 149/151 (98.68%), Query Frame = 0
Query: 1 MASKILFLVLLSAFLCTTSWARKLTTTSFHDQKFFHRPGFGGGGGGGGFGGGGGGGLGGG 60
MASKILFLVLLSAFLCTTSWARKLTTTSFHDQKFFHRPGFGGGGGGGGFGGGGGGGLGGG
Sbjct: 1 MASKILFLVLLSAFLCTTSWARKLTTTSFHDQKFFHRPGFGGGGGGGGFGGGGGGGLGGG 60
Query: 61 FGGGSGFGGGAGGGAGGGAGGGFGGGGGGGLGGGGGIGGGAGGGFGGGAGAGGGLGGGGG 120
FGGGSGFGGGAGGGAGGGAGGGFGGGGGG LGGGGGIGGGAGGGFGGGAGAGGGLGGGGG
Sbjct: 61 FGGGSGFGGGAGGGAGGGAGGGFGGGGGG-LGGGGGIGGGAGGGFGGGAGAGGGLGGGGG 120
Query: 121 AGGGGGFGGGSGGGLGGGSGFGGGAGAGGGF 151
AGGGGGFGGG GGGLGGGSGFGGGAGAGGGF
Sbjct: 121 AGGGGGFGGGRGGGLGGGSGFGGGAGAGGGF 150
BLAST of MC10g1074 vs. ExPASy TrEMBL
Match:
A0A5A7VJD1 (Glycine-rich cell wall structural protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold37G001320 PE=4 SV=1)
HSP 1 Score: 86.7 bits (213), Expect = 1.69e-18
Identity = 128/161 (79.50%), Postives = 134/161 (83.23%), Query Frame = 0
Query: 1 MASKILFLVLLSAFLCTTSWARKLTTTSFHDQKFFHRPGFGGGG----GGGGFGGGGGGG 60
MASKI+FLV L AFL TTS ARKL+T SF D+KFFHRP +GGGG GGGGFGGGGGGG
Sbjct: 1 MASKIVFLVFLGAFLFTTSGARKLSTASFQDEKFFHRPRYGGGGLGGGGGGGFGGGGGGG 60
Query: 61 LGGG----FGGGSGFGGGAGGGAGGGAGGGFGGGGGGGLGGGGGIGGGAGGGFGGGAGAG 120
LGGG FGGGSGFGGG GGGAGGG GGGFGGGGGGGLGGG G GGGAG FGGG+G G
Sbjct: 61 LGGGSGGGFGGGSGFGGGVGGGAGGGGGGGFGGGGGGGLGGGSGFGGGAG--FGGGSGGG 120
Query: 121 GGLGGGGGAGGGGGFGGGSGGGLGGGSG--FGGGAGAGGGF 151
GGLGGGGGAGGGGGFGGG GGGLGGG+G FG GAG GGGF
Sbjct: 121 GGLGGGGGAGGGGGFGGGGGGGLGGGAGGGFGSGAGTGGGF 159
BLAST of MC10g1074 vs. ExPASy TrEMBL
Match:
A0A5D3BB90 (Glycine-rich cell wall structural protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G002250 PE=4 SV=1)
HSP 1 Score: 78.2 bits (191), Expect = 2.93e-15
Identity = 124/161 (77.02%), Postives = 132/161 (81.99%), Query Frame = 0
Query: 1 MASKILFLVLLSAFLCTTSWARKLTTTSFHDQKFFHRPGFGGGG----GGGGFGGGGGGG 60
MASKI+FLV L AFL +TS ARKL+T SF D+KFFHRP FGGGG GGGGFGGGGGGG
Sbjct: 1 MASKIVFLVFLGAFLFSTSGARKLSTASFQDEKFFHRPRFGGGGLGGGGGGGFGGGGGGG 60
Query: 61 LGGG----FGGGSGFGGGAGGGAGGGAGGGFGGGGGGGLGGGGGIGGGAGGGFGGGAGAG 120
LGGG FGGGSGFGGG GGGAGGG G FGGGGGGG+GGG G GGGAG FGGG+G G
Sbjct: 61 LGGGSGGGFGGGSGFGGGVGGGAGGGGG--FGGGGGGGIGGGSGFGGGAG--FGGGSGGG 120
Query: 121 GGLGGGGGAGGGGGFGGGSGGGLGGGSG--FGGGAGAGGGF 151
GGLGGG AGGGGGFGGG GGGLGGG+G FGGGAGAGGG+
Sbjct: 121 GGLGGG--AGGGGGFGGGGGGGLGGGAGGGFGGGAGAGGGY 155
BLAST of MC10g1074 vs. ExPASy TrEMBL
Match:
A0A0A0L2A7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G064240 PE=4 SV=1)
HSP 1 Score: 72.4 bits (176), Expect = 2.27e-12
Identity = 77/99 (77.78%), Postives = 81/99 (81.82%), Query Frame = 0
Query: 1 MASKILFLVLLSAFLCTTSWARKLTTTSFHDQKFFHRPGFGGGG----GGGGFGGGGGGG 60
MASKI+FLV L AFL +TS ARKL+T SF D+KFF RP FGGGG GGGGFGGGGGGG
Sbjct: 1 MASKIVFLVFLGAFLFSTSGARKLSTASFQDEKFFRRPRFGGGGLGGGGGGGFGGGGGGG 60
Query: 61 LGGG----FGGGSGFGGGAGGGAGGGAGGGFGGGGGGGL 91
LGGG FGGGSGFGGG GGGAGGG GGGFGGGGGGGL
Sbjct: 61 LGGGSGGGFGGGSGFGGGVGGGAGGGGGGGFGGGGGGGL 99
BLAST of MC10g1074 vs. ExPASy TrEMBL
Match:
A0A2K2BR58 (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_001G021300 PE=4 SV=1)
HSP 1 Score: 65.1 bits (157), Expect = 2.99e-10
Identity = 120/155 (77.42%), Postives = 128/155 (82.58%), Query Frame = 0
Query: 1 MASKILFLVLLSAFLCTTSWARKLTTT---SFHDQK-FFHRPGFGGG-GGGGGFGGGGGG 60
MASK+L L+L SA +C+TS ARKL T SF D+K FHRPGFGGG GGGGGFGGGGGG
Sbjct: 1 MASKLLLLLLFSALVCSTS-ARKLVGTEKGSFEDEKNLFHRPGFGGGAGGGGGFGGGGGG 60
Query: 61 GLGGGFGGGSGFGGGAGGGAGGGAGGGFGGGGGGGLGGGGGIGGGAGGGFGGGAGAGGGL 120
GLGGG +GFGGGAGGGAGGG GGG GGGGG G GGGGG+GGGAGGGFGGGAGAGGGL
Sbjct: 61 GLGGG----AGFGGGAGGGAGGGLGGGAGGGGGFGGGGGGGVGGGAGGGFGGGAGAGGGL 120
Query: 121 GGGGGAGGGGGFGGGSGGGLGGGSG--FGGGAGAG 148
GGG AGGGGGFGGG GGGLGGG+G FGGGAG G
Sbjct: 121 GGG--AGGGGGFGGGGGGGLGGGAGGGFGGGAGGG 148
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
XP_022151305.1 | 2.13e-40 | 98.68 | glycine-rich protein 5 [Momordica charantia] | [more] |
KAA0065825.1 | 3.50e-18 | 79.50 | glycine-rich cell wall structural protein-like [Cucumis melo var. makuwa] | [more] |
XP_011650511.1 | 1.46e-16 | 79.50 | glycine-rich cell wall structural protein-like [Cucumis sativus] | [more] |
KAA0065824.1 | 6.05e-15 | 77.02 | glycine-rich cell wall structural protein-like [Cucumis melo var. makuwa] >TYJ96... | [more] |
XP_024437755.1 | 6.18e-10 | 77.42 | glycine-rich protein 23-like [Populus trichocarpa] >PNT52256.1 hypothetical prot... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1DAT8 | 1.03e-40 | 98.68 | glycine-rich protein 5 OS=Momordica charantia OX=3673 GN=LOC111019269 PE=4 SV=1 | [more] |
A0A5A7VJD1 | 1.69e-18 | 79.50 | Glycine-rich cell wall structural protein-like OS=Cucumis melo var. makuwa OX=11... | [more] |
A0A5D3BB90 | 2.93e-15 | 77.02 | Glycine-rich cell wall structural protein-like OS=Cucumis melo var. makuwa OX=11... | [more] |
A0A0A0L2A7 | 2.27e-12 | 77.78 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G064240 PE=4 SV=1 | [more] |
A0A2K2BR58 | 2.99e-10 | 77.42 | Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_001G021300 PE=4 ... | [more] |
Match Name | E-value | Identity | Description | |