MC10g1023 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC10g1023
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Ubiquitin family protein
Location	MC10: 9808177 .. 9808411 (+)
RNA-Seq Expression	MC10g1023
Synteny	MC10g1023

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTAAGATCTCTGTGAAAACGATGCGTGGGCAGAGATTTGCTTTGGATGTTTTAACGTCGGACACTCGCAAATGTGAAGTATAAAATAGAGAGGGAAAAAGGGTACGATCAGCACACCCAAATTTTGACCTTTTTTGGAAAGATTTTACGCGATGATCGAACTTTGGAAGACTACAATATGCACCACAAACAGAACTTGCCATTGCATTTGGTTTTTCGTCTTCCTGGTGGAATT

mRNA sequence

ATTAAGATCTCTGTGAAAACGATGCGTGGGCAGAGATTTGCTTTGGATGTTTTAACGTCGGACACTGCAAATGTGAAGTATAAAATAGAGAGGGAAAAAGGGTACGATCAGCACACCCAAATTTTGACCTTTTTTGGAAAGATTTTACGCGATGATCGAACTTTGGAAGACTACAATATGCACCACAAACAGAACTTGCCATTGCATTTGGTTTTTCGTCTTCCTGGTGGAATT

Coding sequence (CDS)

ATTAAGATCTCTGTGAAAACGATGCGTGGGCAGAGATTTGCTTTGGATGTTTTAACGTCGGACACTGCAAATGTGAAGTATAAAATAGAGAGGGAAAAAGGGTACGATCAGCACACCCAAATTTTGACCTTTTTTGGAAAGATTTTACGCGATGATCGAACTTTGGAAGACTACAATATGCACCACAAACAGAACTTGCCATTGCATTTGGTTTTTCGTCTTCCTGGTGGAATT

Protein sequence

IKISVKTMRGQRFALDVLTSDTANVKYKIEREKGYDQHTQILTFFGKILRDDRTLEDYNMHHKQNLPLHLVFRLPGGI

Homology

[Close]

BLAST of MC10g1023 vs. ExPASy Swiss-Prot
Match: P46575 (Ubiquitin-60S ribosomal protein L40 OS=Eimeria bovis OX=5803 PE=2 SV=2)

HSP 1 Score: 64.7 bits (156), Expect = 5.3e-10
Identity = 39/79 (49.37%), Postives = 48/79 (60.76%), Query Frame = 0


Query: 1  IKISVKTMRGQRFALDVLTSDT-ANVKYKIEREKGYDQHTQILTFFGKILRDDRTLEDYN 60
          ++I VKT+ G+   LDV  SDT  NVK KI+ ++G     Q L F GK L D RTL DYN
Sbjct: 1  MQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 61 MHHKQNLPLHLVFRLPGGI 79
          +  +    LHLV RL GGI
Sbjct: 61 IQKEST--LHLVLRLRGGI 77

[Close]

BLAST of MC10g1023 vs. ExPASy Swiss-Prot
Match: P14795 (Ubiquitin-60S ribosomal protein L40 OS=Trypanosoma cruzi OX=5693 GN=FUS1 PE=2 SV=2)

HSP 1 Score: 64.7 bits (156), Expect = 5.3e-10
Identity = 38/79 (48.10%), Postives = 50/79 (63.29%), Query Frame = 0


Query: 1  IKISVKTMRGQRFALDVLTSDT-ANVKYKIEREKGYDQHTQILTFFGKILRDDRTLEDYN 60
          ++I VKT+ G+  AL+V +SDT  NVK KI+ ++G     Q L F GK L D RTL DYN
Sbjct: 1  MQIFVKTLTGKTIALEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61 MHHKQNLPLHLVFRLPGGI 79
          +  +    LHLV RL GG+
Sbjct: 61 IQKEST--LHLVLRLRGGV 77

[Close]

BLAST of MC10g1023 vs. ExPASy Swiss-Prot
Match: P0C224 (Ubiquitin-60S ribosomal protein L40 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=crp-79 PE=1 SV=2)

HSP 1 Score: 64.3 bits (155), Expect = 6.9e-10
Identity = 38/79 (48.10%), Postives = 49/79 (62.03%), Query Frame = 0


Query: 1  IKISVKTMRGQRFALDVLTSDTA-NVKYKIEREKGYDQHTQILTFFGKILRDDRTLEDYN 60
          ++I VKT+ G+   L+V +SDT  NVK KI+ ++G     Q L F GK L D RTL DYN
Sbjct: 1  MQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 61 MHHKQNLPLHLVFRLPGGI 79
          +  +    LHLV RL GGI
Sbjct: 61 IQKEST--LHLVLRLRGGI 77

[Close]

BLAST of MC10g1023 vs. ExPASy Swiss-Prot
Match: P0CH06 (Ubiquitin-60S ribosomal protein L40 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=ubi1 PE=1 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 9.1e-10
Identity = 38/79 (48.10%), Postives = 49/79 (62.03%), Query Frame = 0


Query: 1  IKISVKTMRGQRFALDVLTSDTA-NVKYKIEREKGYDQHTQILTFFGKILRDDRTLEDYN 60
          ++I VKT+ G+   L+V +SDT  NVK KI+ ++G     Q L F GK L D RTL DYN
Sbjct: 1  MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 61 MHHKQNLPLHLVFRLPGGI 79
          +  +    LHLV RL GGI
Sbjct: 61 IQKEST--LHLVLRLRGGI 77

[Close]

BLAST of MC10g1023 vs. ExPASy Swiss-Prot
Match: P0CH07 (Ubiquitin-60S ribosomal protein L40 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=uep1 PE=1 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 9.1e-10
Identity = 38/79 (48.10%), Postives = 49/79 (62.03%), Query Frame = 0


Query: 1  IKISVKTMRGQRFALDVLTSDTA-NVKYKIEREKGYDQHTQILTFFGKILRDDRTLEDYN 60
          ++I VKT+ G+   L+V +SDT  NVK KI+ ++G     Q L F GK L D RTL DYN
Sbjct: 1  MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 61 MHHKQNLPLHLVFRLPGGI 79
          +  +    LHLV RL GGI
Sbjct: 61 IQKEST--LHLVLRLRGGI 77

[Close]

BLAST of MC10g1023 vs. NCBI nr
Match: KDR23619.1 (Ubiquitin [Zootermopsis nevadensis])

HSP 1 Score: 67.8 bits (164), Expect = 8.26e-13
Identity = 37/78 (47.44%), Postives = 49/78 (62.82%), Query Frame = 0


Query: 1  IKISVKTMRGQRFALDVLTSDTA-NVKYKIEREKGYDQHTQILTFFGKILRDDRTLEDYN 60
          +++ VKT+ G+   L+V  SDT  N+K KI+ ++G   H Q L F GK L D RTL DYN
Sbjct: 1  MQVFVKTLTGKTITLEVEPSDTVENLKRKIQDKEGIPPHQQRLIFAGKQLEDGRTLSDYN 60

Query: 61 MHHKQNLPLHLVFRLPGG 77
          +H +  L  HLV RL GG
Sbjct: 61 IHKESTL--HLVLRLRGG 76

[Close]

BLAST of MC10g1023 vs. NCBI nr
Match: XP_021930867.1 (ubiquitin-like [Zootermopsis nevadensis])

HSP 1 Score: 67.8 bits (164), Expect = 9.62e-13
Identity = 37/78 (47.44%), Postives = 49/78 (62.82%), Query Frame = 0


Query: 1  IKISVKTMRGQRFALDVLTSDTA-NVKYKIEREKGYDQHTQILTFFGKILRDDRTLEDYN 60
          +++ VKT+ G+   L+V  SDT  N+K KI+ ++G   H Q L F GK L D RTL DYN
Sbjct: 7  MQVFVKTLTGKTITLEVEPSDTVENLKRKIQDKEGIPPHQQRLIFAGKQLEDGRTLSDYN 66

Query: 61 MHHKQNLPLHLVFRLPGG 77
          +H +  L  HLV RL GG
Sbjct: 67 IHKESTL--HLVLRLRGG 82

[Close]

BLAST of MC10g1023 vs. NCBI nr
Match: ORX81694.1 (ubiquitin-domain-containing protein [Anaeromyces robustus])

HSP 1 Score: 67.4 bits (163), Expect = 2.50e-12
Identity = 38/79 (48.10%), Postives = 50/79 (63.29%), Query Frame = 0


Query: 1  IKISVKTMRGQRFALDVLTSDT-ANVKYKIEREKGYDQHTQILTFFGKILRDDRTLEDYN 60
          ++I VKT+ G+   L+V +SD+  NVK KI+ ++G     Q L F GK L DDRTL DYN
Sbjct: 11 MQIFVKTLTGKTITLEVESSDSIVNVKQKIQEKEGIPPDQQRLIFAGKQLEDDRTLSDYN 70

Query: 61 MHHKQNLPLHLVFRLPGGI 78
          +  +  L  HLV RL GGI
Sbjct: 71 IQKESTL--HLVLRLRGGI 87

[Close]

BLAST of MC10g1023 vs. NCBI nr
Match: XP_007324133.1 (hypothetical protein SERLADRAFT_402972, partial [Serpula lacrymans var. lacrymans S7.9] >EGO18909.1 hypothetical protein SERLADRAFT_402972, partial [Serpula lacrymans var. lacrymans S7.9])

HSP 1 Score: 66.2 bits (160), Expect = 3.43e-12
Identity = 38/79 (48.10%), Postives = 50/79 (63.29%), Query Frame = 0


Query: 1  IKISVKTMRGQRFALDVLTSDTA-NVKYKIEREKGYDQHTQILTFFGKILRDDRTLEDYN 60
          ++I VKT+ G+   L+V +SDT  NVK KI+ ++G+    Q L F GK L D RTL DYN
Sbjct: 1  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGFPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 61 MHHKQNLPLHLVFRLPGGI 78
          +  +  L  HLV RL GGI
Sbjct: 61 IQKESTL--HLVLRLRGGI 77

[Close]

BLAST of MC10g1023 vs. NCBI nr
Match: NBS67833.1 (hypothetical protein [bacterium])

HSP 1 Score: 66.2 bits (160), Expect = 3.43e-12
Identity = 38/78 (48.72%), Postives = 50/78 (64.10%), Query Frame = 0


Query: 1  IKISVKTMRGQRFALDVLTSDT-ANVKYKIEREKGYDQHTQILTFFGKILRDDRTLEDYN 60
          ++I VKT+ G+   L+V +SDT AN+K KI+ ++G     Q L F GK L DDRTL DYN
Sbjct: 1  MQIFVKTLTGKTITLEVESSDTIANMKAKIQDKEGIPPDQQRLIFAGKQLEDDRTLADYN 60

Query: 61 MHHKQNLPLHLVFRLPGG 77
          +  +  L  HLV RL GG
Sbjct: 61 VQKESTL--HLVLRLRGG 76

[Close]

BLAST of MC10g1023 vs. ExPASy TrEMBL
Match: A0A067RUW4 (Ubiquitin OS=Zootermopsis nevadensis OX=136037 GN=L798_12179 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 4.00e-13
Identity = 37/78 (47.44%), Postives = 49/78 (62.82%), Query Frame = 0


Query: 1  IKISVKTMRGQRFALDVLTSDTA-NVKYKIEREKGYDQHTQILTFFGKILRDDRTLEDYN 60
          +++ VKT+ G+   L+V  SDT  N+K KI+ ++G   H Q L F GK L D RTL DYN
Sbjct: 1  MQVFVKTLTGKTITLEVEPSDTVENLKRKIQDKEGIPPHQQRLIFAGKQLEDGRTLSDYN 60

Query: 61 MHHKQNLPLHLVFRLPGG 77
          +H +  L  HLV RL GG
Sbjct: 61 IHKESTL--HLVLRLRGG 76

[Close]

BLAST of MC10g1023 vs. ExPASy TrEMBL
Match: A0A1Y1X8L9 (Ubiquitin OS=Anaeromyces robustus OX=1754192 GN=BCR32DRAFT_244744 PE=3 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.21e-12
Identity = 38/79 (48.10%), Postives = 50/79 (63.29%), Query Frame = 0


Query: 1  IKISVKTMRGQRFALDVLTSDT-ANVKYKIEREKGYDQHTQILTFFGKILRDDRTLEDYN 60
          ++I VKT+ G+   L+V +SD+  NVK KI+ ++G     Q L F GK L DDRTL DYN
Sbjct: 11 MQIFVKTLTGKTITLEVESSDSIVNVKQKIQEKEGIPPDQQRLIFAGKQLEDDRTLSDYN 70

Query: 61 MHHKQNLPLHLVFRLPGGI 78
          +  +  L  HLV RL GGI
Sbjct: 71 IQKESTL--HLVLRLRGGI 87

[Close]

BLAST of MC10g1023 vs. ExPASy TrEMBL
Match: F8PD60 (Ubiquitin-like domain-containing protein (Fragment) OS=Serpula lacrymans var. lacrymans (strain S7.9) OX=578457 GN=SERLADRAFT_402972 PE=4 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 1.66e-12
Identity = 38/79 (48.10%), Postives = 50/79 (63.29%), Query Frame = 0


Query: 1  IKISVKTMRGQRFALDVLTSDTA-NVKYKIEREKGYDQHTQILTFFGKILRDDRTLEDYN 60
          ++I VKT+ G+   L+V +SDT  NVK KI+ ++G+    Q L F GK L D RTL DYN
Sbjct: 1  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGFPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 61 MHHKQNLPLHLVFRLPGGI 78
          +  +  L  HLV RL GGI
Sbjct: 61 IQKESTL--HLVLRLRGGI 77

[Close]

BLAST of MC10g1023 vs. ExPASy TrEMBL
Match: A0A1Y3NQA1 (Ubiquitin-like domain-containing protein (Fragment) OS=Piromyces sp. (strain E2) OX=73868 GN=PIROE2DRAFT_26572 PE=4 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 1.79e-12
Identity = 38/77 (49.35%), Postives = 48/77 (62.34%), Query Frame = 0


Query: 3  ISVKTMRGQRFALDVLTSDT-ANVKYKIEREKGYDQHTQILTFFGKILRDDRTLEDYNMH 62
          I VKT+ G+   L+V +SD+  NVK KI+ ++G     Q L F GK L DDRTL DYN+ 
Sbjct: 1  IFVKTLTGKTITLEVESSDSIVNVKNKIQEKEGIPPDQQRLIFAGKQLEDDRTLSDYNIQ 60

Query: 63 HKQNLPLHLVFRLPGGI 78
           +  L  HLV RL GGI
Sbjct: 61 KESTL--HLVLRLRGGI 75

[Close]

BLAST of MC10g1023 vs. ExPASy TrEMBL
Match: B7XH78 (LSU ribosomal protein L40E / Ubiquitin OS=Enterocytozoon bieneusi (strain H348) OX=481877 GN=EBI_27429 PE=4 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 1.79e-12
Identity = 39/79 (49.37%), Postives = 49/79 (62.03%), Query Frame = 0


Query: 1  IKISVKTMRGQRFALDVLTSDTA-NVKYKIEREKGYDQHTQILTFFGKILRDDRTLEDYN 60
          ++I VKT+ G+   L+V TSDT  NVK KI+ ++G     Q L F GK L D RTL DYN
Sbjct: 1  MQIFVKTLTGKTITLEVETSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 61 MHHKQNLPLHLVFRLPGGI 78
          +  +  L  HLV RL GGI
Sbjct: 61 IQKESTL--HLVLRLRGGI 77

[Close]

BLAST of MC10g1023 vs. TAIR 10
Match: AT2G36170.1 (Ubiquitin supergroup;Ribosomal protein L40e )

HSP 1 Score: 63.5 bits (153), Expect = 8.4e-11
Identity = 38/79 (48.10%), Postives = 49/79 (62.03%), Query Frame = 0


Query: 1  IKISVKTMRGQRFALDVLTSDTA-NVKYKIEREKGYDQHTQILTFFGKILRDDRTLEDYN 60
          ++I VKT+ G+   L+V +SDT  NVK KI+ ++G     Q L F GK L D RTL DYN
Sbjct: 1  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61 MHHKQNLPLHLVFRLPGGI 79
          +  +    LHLV RL GGI
Sbjct: 61 IQKEST--LHLVLRLRGGI 77

[Close]

BLAST of MC10g1023 vs. TAIR 10
Match: AT3G52590.1 (ubiquitin extension protein 1 )

HSP 1 Score: 63.5 bits (153), Expect = 8.4e-11
Identity = 38/79 (48.10%), Postives = 49/79 (62.03%), Query Frame = 0


Query: 1  IKISVKTMRGQRFALDVLTSDTA-NVKYKIEREKGYDQHTQILTFFGKILRDDRTLEDYN 60
          ++I VKT+ G+   L+V +SDT  NVK KI+ ++G     Q L F GK L D RTL DYN
Sbjct: 1  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61 MHHKQNLPLHLVFRLPGGI 79
          +  +    LHLV RL GGI
Sbjct: 61 IQKEST--LHLVLRLRGGI 77

[Close]

BLAST of MC10g1023 vs. TAIR 10
Match: AT1G65350.1 (ubiquitin 13 )

HSP 1 Score: 62.4 bits (150), Expect = 1.9e-10
Identity = 37/79 (46.84%), Postives = 49/79 (62.03%), Query Frame = 0


Query: 1  IKISVKTMRGQRFALDVLTSDTA-NVKYKIEREKGYDQHTQILTFFGKILRDDRTLEDYN 60
          ++I VKT+ G+   L+V +SDT  NVK KI+ ++G     Q L F GK L D RTL DYN
Sbjct: 1  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61 MHHKQNLPLHLVFRLPGGI 79
          +  +    LHLV RL GG+
Sbjct: 61 IQKEST--LHLVLRLRGGM 77

[Close]

BLAST of MC10g1023 vs. TAIR 10
Match: AT4G05320.2 (polyubiquitin 10 )

HSP 1 Score: 62.4 bits (150), Expect = 1.9e-10
Identity = 37/79 (46.84%), Postives = 49/79 (62.03%), Query Frame = 0


Query: 1  IKISVKTMRGQRFALDVLTSDTA-NVKYKIEREKGYDQHTQILTFFGKILRDDRTLEDYN 60
          ++I VKT+ G+   L+V +SDT  NVK KI+ ++G     Q L F GK L D RTL DYN
Sbjct: 1  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61 MHHKQNLPLHLVFRLPGGI 79
          +  +    LHLV RL GG+
Sbjct: 61 IQKEST--LHLVLRLRGGM 77

[Close]

BLAST of MC10g1023 vs. TAIR 10
Match: AT4G02890.1 (Ubiquitin family protein )

HSP 1 Score: 62.4 bits (150), Expect = 1.9e-10
Identity = 37/79 (46.84%), Postives = 49/79 (62.03%), Query Frame = 0


Query: 1  IKISVKTMRGQRFALDVLTSDTA-NVKYKIEREKGYDQHTQILTFFGKILRDDRTLEDYN 60
          ++I VKT+ G+   L+V +SDT  NVK KI+ ++G     Q L F GK L D RTL DYN
Sbjct: 1  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61 MHHKQNLPLHLVFRLPGGI 79
          +  +    LHLV RL GG+
Sbjct: 61 IQKEST--LHLVLRLRGGM 77

The following BLAST results are available for this feature:

BLAST of MC10g1023 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P46575	5.3e-10	49.37	Ubiquitin-60S ribosomal protein L40 OS=Eimeria bovis OX=5803 PE=2 SV=2	[more]
P14795	5.3e-10	48.10	Ubiquitin-60S ribosomal protein L40 OS=Trypanosoma cruzi OX=5693 GN=FUS1 PE=2 SV...	[more]
P0C224	6.9e-10	48.10	Ubiquitin-60S ribosomal protein L40 OS=Neurospora crassa (strain ATCC 24698 / 74...	[more]
P0CH06	9.1e-10	48.10	Ubiquitin-60S ribosomal protein L40 OS=Schizosaccharomyces pombe (strain 972 / A...	[more]
P0CH07	9.1e-10	48.10	Ubiquitin-60S ribosomal protein L40 OS=Schizosaccharomyces pombe (strain 972 / A...	[more]

BLAST of MC10g1023 vs. NCBI nr


Match Name	E-value	Identity	Description
KDR23619.1	8.26e-13	47.44	Ubiquitin [Zootermopsis nevadensis]	[more]
XP_021930867.1	9.62e-13	47.44	ubiquitin-like [Zootermopsis nevadensis]	[more]
ORX81694.1	2.50e-12	48.10	ubiquitin-domain-containing protein [Anaeromyces robustus]	[more]
XP_007324133.1	3.43e-12	48.10	hypothetical protein SERLADRAFT_402972, partial [Serpula lacrymans var. lacryman...	[more]
NBS67833.1	3.43e-12	48.72	hypothetical protein [bacterium]	[more]

BLAST of MC10g1023 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A067RUW4	4.00e-13	47.44	Ubiquitin OS=Zootermopsis nevadensis OX=136037 GN=L798_12179 PE=4 SV=1	[more]
A0A1Y1X8L9	1.21e-12	48.10	Ubiquitin OS=Anaeromyces robustus OX=1754192 GN=BCR32DRAFT_244744 PE=3 SV=1	[more]
F8PD60	1.66e-12	48.10	Ubiquitin-like domain-containing protein (Fragment) OS=Serpula lacrymans var. la...	[more]
A0A1Y3NQA1	1.79e-12	49.35	Ubiquitin-like domain-containing protein (Fragment) OS=Piromyces sp. (strain E2)...	[more]
B7XH78	1.79e-12	49.37	LSU ribosomal protein L40E / Ubiquitin OS=Enterocytozoon bieneusi (strain H348) ...	[more]

BLAST of MC10g1023 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G36170.1	8.4e-11	48.10	Ubiquitin supergroup;Ribosomal protein L40e	[more]
AT3G52590.1	8.4e-11	48.10	ubiquitin extension protein 1	[more]
AT1G65350.1	1.9e-10	46.84	ubiquitin 13	[more]
AT4G05320.2	1.9e-10	46.84	polyubiquitin 10	[more]
AT4G02890.1	1.9e-10	46.84	Ubiquitin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000626	Ubiquitin-like domain	SMART	SM00213	ubq_7	coord: 1..73 e-value: 6.9E-6 score: 35.6
IPR000626	Ubiquitin-like domain	PFAM	PF00240	ubiquitin	coord: 3..70 e-value: 8.2E-15 score: 54.3
IPR000626	Ubiquitin-like domain	PROSITE	PS50053	UBIQUITIN_2	coord: 1..70 score: 12.269648
None	No IPR available	GENE3D	3.10.20.90		coord: 1..78 e-value: 1.1E-19 score: 72.0
None	No IPR available	PANTHER	PTHR10666:SF370	POLYUBIQUITIN 3	coord: 2..78
None	No IPR available	PANTHER	PTHR10666	UBIQUITIN	coord: 2..78
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 1..77

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC10g1023.1	MC10g1023.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0044267	cellular protein metabolic process
cellular_component	GO:0043229	intracellular organelle
molecular_function	GO:0005515	protein binding