MC10g0984 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC10g0984
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Unknown protein
Location	MC10: 8781378 .. 8781608 (+)
RNA-Seq Expression	MC10g0984
Synteny	MC10g0984

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AATGGCAAAGCAAGTAAAGATAAGGAGGAGGAGGAGGACGGCGGCGAAAAGGGAAGTGAGAGAGCGCCGTCGACGGCGGAGGAGTTCGAGCGGGTGGCGGATGAGAAGCTGAAGGAAACGGAGGCGGCGGCGGAGGGTGGAGGCGGGAGCGTCTCTGATGAAGAAGCCCTCGGAAAGAGCCGCCTCCCTAACGACGACTTAGACCGAGGGCCTGGTTACCGGCCCTGTAGC

mRNA sequence

AATGGCAAAGCAAGTAAAGATAAGGAGGAGGAGGAGGACGGCGGCGAAAAGGGAAGTGAGAGAGCGCCGTCGACGGCGGAGGAGTTCGAGCGGGTGGCGGATGAGAAGCTGAAGGAAACGGAGGCGGCGGCGGAGGGTGGAGGCGGGAGCGTCTCTGATGAAGAAGCCCTCGGAAAGAGCCGCCTCCCTAACGACGACTTAGACCGAGGGCCTGGTTACCGGCCCTGTAGC

Coding sequence (CDS)

AATGGCAAAGCAAGTAAAGATAAGGAGGAGGAGGAGGACGGCGGCGAAAAGGGAAGTGAGAGAGCGCCGTCGACGGCGGAGGAGTTCGAGCGGGTGGCGGATGAGAAGCTGAAGGAAACGGAGGCGGCGGCGGAGGGTGGAGGCGGGAGCGTCTCTGATGAAGAAGCCCTCGGAAAGAGCCGCCTCCCTAACGACGACTTAGACCGAGGGCCTGGTTACCGGCCCTGTAGC

Protein sequence

NGKASKDKEEEEDGGEKGSERAPSTAEEFERVADEKLKETEAAAEGGGGSVSDEEALGKSRLPNDDLDRGPGYRPCS

Homology

[Close]

BLAST of MC10g0984 vs. NCBI nr
Match: KGN56105.1 (hypothetical protein Csa_009481 [Cucumis sativus])

HSP 1 Score: 50.8 bits (120), Expect = 2.33e-05
Identity = 38/82 (46.34%), Postives = 48/82 (58.54%), Query Frame = 0


Query: 2   GKASKDKEEEEDGGEKGSERAPSTAEEFERVADEKL----KETEAAAEGGGGSVSDEE-- 61
           GK SKD+ E   G    +ERAPSTAEEF R+A EK     +E E  A  G    + E   
Sbjct: 97  GKPSKDEAEHSGGERSKAERAPSTAEEFNRMATEKQSKDHQEEEVDAVHGRDKFAKESEA 156

Query: 62  ALGKSRLPNDDLDRGPGYRPCS 77
           A+ KS  PN+ +++GP YRPCS
Sbjct: 157 AMEKSHDPNNHINKGPNYRPCS 178

[Close]

BLAST of MC10g0984 vs. NCBI nr
Match: XP_016900656.1 (PREDICTED: uncharacterized protein LOC107990980 isoform X2 [Cucumis melo])

HSP 1 Score: 49.7 bits (117), Expect = 2.92e-05
Identity = 33/74 (44.59%), Postives = 44/74 (59.46%), Query Frame = 0


Query: 5   SKDKEEEEDGGEKGSERAPSTAEEFERVADEK-LKETEAAAEGGGGSVSDEEALGKSRLP 64
           SKD+ E   G    +ERAPSTAEEF R+A EK  K+ E   +       +   +GKS  P
Sbjct: 52  SKDEAERSGGERSKAERAPSTAEEFNRMATEKESKDQEEEVDEHDKVTKESGEMGKSSDP 111

Query: 65  NDDLDRGPGYRPCS 77
           N+ +++GP YRPCS
Sbjct: 112 NNHINKGPNYRPCS 125

[Close]

BLAST of MC10g0984 vs. NCBI nr
Match: XP_016900655.1 (PREDICTED: uncharacterized protein LOC107990980 isoform X1 [Cucumis melo])

HSP 1 Score: 49.7 bits (117), Expect = 4.68e-05
Identity = 33/74 (44.59%), Postives = 44/74 (59.46%), Query Frame = 0


Query: 5   SKDKEEEEDGGEKGSERAPSTAEEFERVADEK-LKETEAAAEGGGGSVSDEEALGKSRLP 64
           SKD+ E   G    +ERAPSTAEEF R+A EK  K+ E   +       +   +GKS  P
Sbjct: 81  SKDEAERSGGERSKAERAPSTAEEFNRMATEKESKDQEEEVDEHDKVTKESGEMGKSSDP 140

Query: 65  NDDLDRGPGYRPCS 77
           N+ +++GP YRPCS
Sbjct: 141 NNHINKGPNYRPCS 154

[Close]

BLAST of MC10g0984 vs. NCBI nr
Match: KAA0055854.1 (uncharacterized protein E6C27_scaffold104G00300 [Cucumis melo var. makuwa] >TYK24078.1 uncharacterized protein E5676_scaffold943G00480 [Cucumis melo var. makuwa])

HSP 1 Score: 46.6 bits (109), Expect = 4.81e-04
Identity = 32/74 (43.24%), Postives = 43/74 (58.11%), Query Frame = 0


Query: 5   SKDKEEEEDGGEKGSERAPSTAEEFERVADEK-LKETEAAAEGGGGSVSDEEALGKSRLP 64
           SKD+ E   G    +ERAPSTAEEF R+A EK  K+ E   +       +   + KS  P
Sbjct: 56  SKDEAERSGGERSKAERAPSTAEEFNRMATEKESKDQEEEVDEHDKVTKESGEMEKSSDP 115

Query: 65  NDDLDRGPGYRPCS 77
           N+ +++GP YRPCS
Sbjct: 116 NNHINKGPNYRPCS 129

[Close]

BLAST of MC10g0984 vs. ExPASy TrEMBL
Match: A0A0A0L2C8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G073950 PE=4 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 1.13e-05
Identity = 38/82 (46.34%), Postives = 48/82 (58.54%), Query Frame = 0


Query: 2   GKASKDKEEEEDGGEKGSERAPSTAEEFERVADEKL----KETEAAAEGGGGSVSDEE-- 61
           GK SKD+ E   G    +ERAPSTAEEF R+A EK     +E E  A  G    + E   
Sbjct: 97  GKPSKDEAEHSGGERSKAERAPSTAEEFNRMATEKQSKDHQEEEVDAVHGRDKFAKESEA 156

Query: 62  ALGKSRLPNDDLDRGPGYRPCS 77
           A+ KS  PN+ +++GP YRPCS
Sbjct: 157 AMEKSHDPNNHINKGPNYRPCS 178

[Close]

BLAST of MC10g0984 vs. ExPASy TrEMBL
Match: A0A1S4DXE7 (uncharacterized protein LOC107990980 isoform X2 OS=Cucumis melo OX=3656 GN=LOC107990980 PE=4 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 1.41e-05
Identity = 33/74 (44.59%), Postives = 44/74 (59.46%), Query Frame = 0


Query: 5   SKDKEEEEDGGEKGSERAPSTAEEFERVADEK-LKETEAAAEGGGGSVSDEEALGKSRLP 64
           SKD+ E   G    +ERAPSTAEEF R+A EK  K+ E   +       +   +GKS  P
Sbjct: 52  SKDEAERSGGERSKAERAPSTAEEFNRMATEKESKDQEEEVDEHDKVTKESGEMGKSSDP 111

Query: 65  NDDLDRGPGYRPCS 77
           N+ +++GP YRPCS
Sbjct: 112 NNHINKGPNYRPCS 125

[Close]

BLAST of MC10g0984 vs. ExPASy TrEMBL
Match: A0A1S4DY64 (uncharacterized protein LOC107990980 isoform X1 OS=Cucumis melo OX=3656 GN=LOC107990980 PE=4 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 2.26e-05
Identity = 33/74 (44.59%), Postives = 44/74 (59.46%), Query Frame = 0


Query: 5   SKDKEEEEDGGEKGSERAPSTAEEFERVADEK-LKETEAAAEGGGGSVSDEEALGKSRLP 64
           SKD+ E   G    +ERAPSTAEEF R+A EK  K+ E   +       +   +GKS  P
Sbjct: 81  SKDEAERSGGERSKAERAPSTAEEFNRMATEKESKDQEEEVDEHDKVTKESGEMGKSSDP 140

Query: 65  NDDLDRGPGYRPCS 77
           N+ +++GP YRPCS
Sbjct: 141 NNHINKGPNYRPCS 154

[Close]

BLAST of MC10g0984 vs. ExPASy TrEMBL
Match: A0A5A7UKZ4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold943G00480 PE=4 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 2.33e-04
Identity = 32/74 (43.24%), Postives = 43/74 (58.11%), Query Frame = 0


Query: 5   SKDKEEEEDGGEKGSERAPSTAEEFERVADEK-LKETEAAAEGGGGSVSDEEALGKSRLP 64
           SKD+ E   G    +ERAPSTAEEF R+A EK  K+ E   +       +   + KS  P
Sbjct: 56  SKDEAERSGGERSKAERAPSTAEEFNRMATEKESKDQEEEVDEHDKVTKESGEMEKSSDP 115

Query: 65  NDDLDRGPGYRPCS 77
           N+ +++GP YRPCS
Sbjct: 116 NNHINKGPNYRPCS 129

The following BLAST results are available for this feature:

BLAST of MC10g0984 vs.


Match Name	E-value	Identity	Description

BLAST of MC10g0984 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN56105.1	2.33e-05	46.34	hypothetical protein Csa_009481 [Cucumis sativus]	[more]
XP_016900656.1	2.92e-05	44.59	PREDICTED: uncharacterized protein LOC107990980 isoform X2 [Cucumis melo]	[more]
XP_016900655.1	4.68e-05	44.59	PREDICTED: uncharacterized protein LOC107990980 isoform X1 [Cucumis melo]	[more]
KAA0055854.1	4.81e-04	43.24	uncharacterized protein E6C27_scaffold104G00300 [Cucumis melo var. makuwa] >TYK2...	[more]

BLAST of MC10g0984 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L2C8	1.13e-05	46.34	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G073950 PE=4 SV=1	[more]
A0A1S4DXE7	1.41e-05	44.59	uncharacterized protein LOC107990980 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S4DY64	2.26e-05	44.59	uncharacterized protein LOC107990980 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5A7UKZ4	2.33e-04	43.24	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of MC10g0984 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..77
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..42

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC10g0984.1	MC10g0984.1	mRNA