MC10g0969 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC10g0969
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Wound-responsive family protein
Location	MC10: 8520934 .. 8521194 (-)
RNA-Seq Expression	MC10g0969
Synteny	MC10g0969

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AGCGCAGCGTGCAGGGCGTGGCTCGTGGCGGCGAGCATCGGCGCCGTCGAGGCGCTGAAGGATCAGGGCGTGTGCCGCTGGAACAACGCCATCAAATCCCTTCACCACCATGGCAAGACCAAGCTCAGATCTTATTACCAGGCCAAGAACCTCTCTGCGTCCTCCTCTTCCGCCATTGCCAACCACATCAGACGATCTCGGGAGGAGCAGATGGGGAAAGTCATGGATTTGAGCTGCTTCGGCCCCAGCACTGTTAGATTC

mRNA sequence

AGCGCAGCGTGCAGGGCGTGGCTCGTGGCGGCGAGCATCGGCGCCGTCGAGGCGCTGAAGGATCAGGGCGTGTGCCGCTGGAACAACGCCATCAAATCCCTTCACCACCATGGCAAGACCAAGCTCAGATCTTATTACCAGGCCAAGAACCTCTCTGCGTCCTCCTCTTCCGCCATTGCCAACCACATCAGACGATCTCGGGAGGAGCAGATGGGGAAAGTCATGGATTTGAGCTGCTTCGGCCCCAGCACTGTTAGATTC

Coding sequence (CDS)

AGCGCAGCGTGCAGGGCGTGGCTCGTGGCGGCGAGCATCGGCGCCGTCGAGGCGCTGAAGGATCAGGGCGTGTGCCGCTGGAACAACGCCATCAAATCCCTTCACCACCATGGCAAGACCAAGCTCAGATCTTATTACCAGGCCAAGAACCTCTCTGCGTCCTCCTCTTCCGCCATTGCCAACCACATCAGACGATCTCGGGAGGAGCAGATGGGGAAAGTCATGGATTTGAGCTGCTTCGGCCCCAGCACTGTTAGATTC

Protein sequence

SAACRAWLVAASIGAVEALKDQGVCRWNNAIKSLHHHGKTKLRSYYQAKNLSASSSSAIANHIRRSREEQMGKVMDLSCFGPSTVRF

Homology

[Close]

BLAST of MC10g0969 vs. NCBI nr
Match: XP_022929392.1 (uncharacterized protein LOC111435977 [Cucurbita moschata] >KAG6577397.1 hypothetical protein SDJN03_24971, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015474.1 hypothetical protein SDJN02_23110, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 147 bits (371), Expect = 4.91e-44
Identity = 72/87 (82.76%), Postives = 77/87 (88.51%), Query Frame = 0


Query: 1  SAACRAWLVAASIGAVEALKDQGVCRWNNAIKSLHHHGKTKLRSYYQAKNLSASSSSAIA 60
          SAACRAW VAASIGAVEA+KDQGVCRWNN IKSLH HG +KLRSYYQAK LSASSSSAIA
Sbjct: 4  SAACRAWFVAASIGAVEAMKDQGVCRWNNLIKSLHQHGNSKLRSYYQAKKLSASSSSAIA 63

Query: 61 NHIRRSREEQMGKVMDLSCFGPSTVRF 87
          N I +SREE+M KVMDL C GPST+RF
Sbjct: 64 NQINKSREEKMRKVMDLGCLGPSTIRF 90

[Close]

BLAST of MC10g0969 vs. NCBI nr
Match: XP_022993930.1 (uncharacterized protein LOC111489778 [Cucurbita maxima])

HSP 1 Score: 146 bits (369), Expect = 9.92e-44
Identity = 72/87 (82.76%), Postives = 77/87 (88.51%), Query Frame = 0


Query: 1  SAACRAWLVAASIGAVEALKDQGVCRWNNAIKSLHHHGKTKLRSYYQAKNLSASSSSAIA 60
          SAACRAW VAASIGAVEALKDQGVCRWNN IKSL  HGKTKLRSYY AK +SASSSSAI 
Sbjct: 4  SAACRAWFVAASIGAVEALKDQGVCRWNNVIKSLQQHGKTKLRSYYPAKKISASSSSAIG 63

Query: 61 NHIRRSREEQMGKVMDLSCFGPSTVRF 87
          N ++RSREE+M KVMDLSC GPST+RF
Sbjct: 64 NQMKRSREEKMRKVMDLSCLGPSTIRF 90

[Close]

BLAST of MC10g0969 vs. NCBI nr
Match: KAG7031383.1 (hypothetical protein SDJN02_05423, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 146 bits (369), Expect = 9.92e-44
Identity = 72/87 (82.76%), Postives = 77/87 (88.51%), Query Frame = 0


Query: 1  SAACRAWLVAASIGAVEALKDQGVCRWNNAIKSLHHHGKTKLRSYYQAKNLSASSSSAIA 60
          SAACRAW VAASIGAVEA KDQGVCRWNN IKSL  HGKTKLRSYYQAK +SASSSSAI 
Sbjct: 4  SAACRAWFVAASIGAVEASKDQGVCRWNNVIKSLQQHGKTKLRSYYQAKKISASSSSAIG 63

Query: 61 NHIRRSREEQMGKVMDLSCFGPSTVRF 87
          N ++RSREE+M KVMDLSC GPST+RF
Sbjct: 64 NQMKRSREEKMRKVMDLSCLGPSTIRF 90

[Close]

BLAST of MC10g0969 vs. NCBI nr
Match: XP_038877273.1 (uncharacterized protein LOC120069557 [Benincasa hispida])

HSP 1 Score: 149 bits (375), Expect = 1.13e-43
Identity = 74/87 (85.06%), Postives = 77/87 (88.51%), Query Frame = 0


Query: 1   SAACRAWLVAASIGAVEALKDQGVCRWNNAIKSLHHHGKTKLRSYYQAKNLSASSSSAIA 60
           SAACRAW VAASIGAVEALKDQGVCRWNN IKSL  HGKTK RSYYQAK LSASSSSAIA
Sbjct: 77  SAACRAWFVAASIGAVEALKDQGVCRWNNVIKSLQQHGKTKFRSYYQAKKLSASSSSAIA 136

Query: 61  NHIRRSREEQMGKVMDLSCFGPSTVRF 87
           N I +SREE+M KVMDLSC GPST+RF
Sbjct: 137 NQINKSREEKMRKVMDLSCLGPSTIRF 163

[Close]

BLAST of MC10g0969 vs. NCBI nr
Match: XP_022985278.1 (uncharacterized protein LOC111483317 [Cucurbita maxima])

HSP 1 Score: 146 bits (368), Expect = 1.41e-43
Identity = 71/87 (81.61%), Postives = 77/87 (88.51%), Query Frame = 0


Query: 1  SAACRAWLVAASIGAVEALKDQGVCRWNNAIKSLHHHGKTKLRSYYQAKNLSASSSSAIA 60
          SAACRAW VAASIGAVEA+KDQGVCRWNN IKSLH HG +KLRSYYQAK LSASSSSAI+
Sbjct: 4  SAACRAWFVAASIGAVEAMKDQGVCRWNNLIKSLHQHGSSKLRSYYQAKKLSASSSSAIS 63

Query: 61 NHIRRSREEQMGKVMDLSCFGPSTVRF 87
          N I +SREE+M KVMDL C GPST+RF
Sbjct: 64 NQINKSREEKMRKVMDLGCLGPSTIRF 90

[Close]

BLAST of MC10g0969 vs. ExPASy TrEMBL
Match: A0A0A0L594 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G099650 PE=4 SV=1)

HSP 1 Score: 147 bits (371), Expect = 2.38e-44
Identity = 72/87 (82.76%), Postives = 78/87 (89.66%), Query Frame = 0


Query: 1  SAACRAWLVAASIGAVEALKDQGVCRWNNAIKSLHHHGKTKLRSYYQAKNLSASSSSAIA 60
          SA CRAW VAASIGAVEALKDQGVCRWNN IKSL  HGKTK+RSYYQAK LSASSSSAIA
Sbjct: 4  SAVCRAWFVAASIGAVEALKDQGVCRWNNVIKSLQQHGKTKVRSYYQAKKLSASSSSAIA 63

Query: 61 NHIRRSREEQMGKVMDLSCFGPSTVRF 87
          N I++SRE++M KVMDLSC GPST+RF
Sbjct: 64 NQIKKSREDKMRKVMDLSCLGPSTIRF 90

[Close]

BLAST of MC10g0969 vs. ExPASy TrEMBL
Match: A0A6J1EMN4 (uncharacterized protein LOC111435977 OS=Cucurbita moschata OX=3662 GN=LOC111435977 PE=4 SV=1)

HSP 1 Score: 147 bits (371), Expect = 2.38e-44
Identity = 72/87 (82.76%), Postives = 77/87 (88.51%), Query Frame = 0


Query: 1  SAACRAWLVAASIGAVEALKDQGVCRWNNAIKSLHHHGKTKLRSYYQAKNLSASSSSAIA 60
          SAACRAW VAASIGAVEA+KDQGVCRWNN IKSLH HG +KLRSYYQAK LSASSSSAIA
Sbjct: 4  SAACRAWFVAASIGAVEAMKDQGVCRWNNLIKSLHQHGNSKLRSYYQAKKLSASSSSAIA 63

Query: 61 NHIRRSREEQMGKVMDLSCFGPSTVRF 87
          N I +SREE+M KVMDL C GPST+RF
Sbjct: 64 NQINKSREEKMRKVMDLGCLGPSTIRF 90

[Close]

BLAST of MC10g0969 vs. ExPASy TrEMBL
Match: A0A6J1JZW3 (uncharacterized protein LOC111489778 OS=Cucurbita maxima OX=3661 GN=LOC111489778 PE=4 SV=1)

HSP 1 Score: 146 bits (369), Expect = 4.80e-44
Identity = 72/87 (82.76%), Postives = 77/87 (88.51%), Query Frame = 0


Query: 1  SAACRAWLVAASIGAVEALKDQGVCRWNNAIKSLHHHGKTKLRSYYQAKNLSASSSSAIA 60
          SAACRAW VAASIGAVEALKDQGVCRWNN IKSL  HGKTKLRSYY AK +SASSSSAI 
Sbjct: 4  SAACRAWFVAASIGAVEALKDQGVCRWNNVIKSLQQHGKTKLRSYYPAKKISASSSSAIG 63

Query: 61 NHIRRSREEQMGKVMDLSCFGPSTVRF 87
          N ++RSREE+M KVMDLSC GPST+RF
Sbjct: 64 NQMKRSREEKMRKVMDLSCLGPSTIRF 90

[Close]

BLAST of MC10g0969 vs. ExPASy TrEMBL
Match: A0A6J1JD67 (uncharacterized protein LOC111483317 OS=Cucurbita maxima OX=3661 GN=LOC111483317 PE=4 SV=1)

HSP 1 Score: 146 bits (368), Expect = 6.82e-44
Identity = 71/87 (81.61%), Postives = 77/87 (88.51%), Query Frame = 0


Query: 1  SAACRAWLVAASIGAVEALKDQGVCRWNNAIKSLHHHGKTKLRSYYQAKNLSASSSSAIA 60
          SAACRAW VAASIGAVEA+KDQGVCRWNN IKSLH HG +KLRSYYQAK LSASSSSAI+
Sbjct: 4  SAACRAWFVAASIGAVEAMKDQGVCRWNNLIKSLHQHGSSKLRSYYQAKKLSASSSSAIS 63

Query: 61 NHIRRSREEQMGKVMDLSCFGPSTVRF 87
          N I +SREE+M KVMDL C GPST+RF
Sbjct: 64 NQINKSREEKMRKVMDLGCLGPSTIRF 90

[Close]

BLAST of MC10g0969 vs. ExPASy TrEMBL
Match: A0A6J1FVH7 (uncharacterized protein LOC111447671 OS=Cucurbita moschata OX=3662 GN=LOC111447671 PE=4 SV=1)

HSP 1 Score: 144 bits (364), Expect = 2.78e-43
Identity = 71/87 (81.61%), Postives = 76/87 (87.36%), Query Frame = 0


Query: 1  SAACRAWLVAASIGAVEALKDQGVCRWNNAIKSLHHHGKTKLRSYYQAKNLSASSSSAIA 60
          SAACRAW VAASIGAVEA KDQGVCRWNN IKSL  HGKTKLRSYYQAK +SASSSSAI 
Sbjct: 4  SAACRAWFVAASIGAVEASKDQGVCRWNNVIKSLQQHGKTKLRSYYQAKKISASSSSAIG 63

Query: 61 NHIRRSREEQMGKVMDLSCFGPSTVRF 87
          N ++R REE+M KVMDLSC GPST+RF
Sbjct: 64 NQMKRCREEKMRKVMDLSCLGPSTIRF 90

[Close]

BLAST of MC10g0969 vs. TAIR 10
Match: AT4G10265.1 (Wound-responsive family protein )

HSP 1 Score: 77.8 bits (190), Expect = 4.8e-15
Identity = 46/84 (54.76%), Postives = 57/84 (67.86%), Query Frame = 0


Query: 1  SAACRAWLVAASIGAVEALKDQ-GVCRWNNAIKSLHHHGKTKLRSYYQAKNLSASSSSAI 60
          S+A + W+VAASIGAVEALKDQ GVCRWN  I+S + + +  LRS  QAK L  SSSS  
Sbjct: 2  SSASKTWMVAASIGAVEALKDQLGVCRWNYVIRSANQYLRNNLRSVSQAKKL--SSSSID 61

Query: 61 ANHIRRSREEQMGKVMDLSCFGPS 84
            +  +  EE +  VM LSC+GPS
Sbjct: 62 YTNKTKQAEESLRTVMYLSCWGPS 83

[Close]

BLAST of MC10g0969 vs. TAIR 10
Match: AT4G10270.1 (Wound-responsive family protein )

HSP 1 Score: 72.4 bits (176), Expect = 2.0e-13
Identity = 42/89 (47.19%), Postives = 55/89 (61.80%), Query Frame = 0


Query: 1  SAACRAWLVAASIGAVEALKDQ-GVCRWNNAIKSLHHHGKTKLRSYYQAKNLSASSSSAI 60
          S+  +AW VA SIGAVEALKDQ G+CRWN  ++S++ H +  +RS  Q K  S+SS SA 
Sbjct: 2  SSTSKAWTVAVSIGAVEALKDQLGLCRWNYILRSVNQHLRNNVRSVSQGKRFSSSSVSAA 61

Query: 61 ANHIRRSR-----EEQMGKVMDLSCFGPS 84
                S      EE +  VM LSC+GP+
Sbjct: 62 VTSSGESEKAKKAEESLRTVMYLSCWGPN 90

[Close]

BLAST of MC10g0969 vs. TAIR 10
Match: AT4G33560.1 (Wound-responsive family protein )

HSP 1 Score: 67.0 bits (162), Expect = 8.5e-12
Identity = 38/88 (43.18%), Postives = 47/88 (53.41%), Query Frame = 0


Query: 6  AWLVAASIGAVEALKDQGVCRWNNAIKSLHHHGKTKLRSYYQAKNLSASSSSAIANHIRR 65
          +W VA +I AVE LKDQGV RWN   + LH     ++R+       S  +SS+ A  IR 
Sbjct: 8  SWAVATAIAAVEVLKDQGVARWNYLFRLLHKEAMARVRTITVPSRPSPPTSSSSATSIRS 67

Query: 66 SR------EEQMGKVMDLSCFGPSTVRF 88
                  E    K M LSCFGP+TVRF
Sbjct: 68 KPLSTTPFETSFEKAMGLSCFGPTTVRF 95

[Close]

BLAST of MC10g0969 vs. TAIR 10
Match: AT2G14070.1 (wound-responsive protein-related )

HSP 1 Score: 48.5 bits (114), Expect = 3.1e-06
Identity = 34/90 (37.78%), Postives = 47/90 (52.22%), Query Frame = 0


Query: 6   AWLVAASIGAVEALKDQGVCRWNNAIKSLHHHGKTKLRSYYQAKN--LSASSSSAIA--- 65
           +W+VA +I AVE        RWN  ++  +   + +LR+         SASSSS+ +   
Sbjct: 114 SWMVATAIAAVET-------RWNYPLRFFNKDVRARLRAIAVTSRPPSSASSSSSSSADL 173

Query: 66  ---NHIRRSREEQMGKVMDLSCFGPSTVRF 88
              NH     E  M +VM LSCFGP+TVRF
Sbjct: 174 VKENHPMPKSEASMERVMCLSCFGPTTVRF 196

The following BLAST results are available for this feature:

BLAST of MC10g0969 vs.


Match Name	E-value	Identity	Description

BLAST of MC10g0969 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022929392.1	4.91e-44	82.76	uncharacterized protein LOC111435977 [Cucurbita moschata] >KAG6577397.1 hypothet...	[more]
XP_022993930.1	9.92e-44	82.76	uncharacterized protein LOC111489778 [Cucurbita maxima]	[more]
KAG7031383.1	9.92e-44	82.76	hypothetical protein SDJN02_05423, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_038877273.1	1.13e-43	85.06	uncharacterized protein LOC120069557 [Benincasa hispida]	[more]
XP_022985278.1	1.41e-43	81.61	uncharacterized protein LOC111483317 [Cucurbita maxima]	[more]

BLAST of MC10g0969 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L594	2.38e-44	82.76	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G099650 PE=4 SV=1	[more]
A0A6J1EMN4	2.38e-44	82.76	uncharacterized protein LOC111435977 OS=Cucurbita moschata OX=3662 GN=LOC1114359...	[more]
A0A6J1JZW3	4.80e-44	82.76	uncharacterized protein LOC111489778 OS=Cucurbita maxima OX=3661 GN=LOC111489778...	[more]
A0A6J1JD67	6.82e-44	81.61	uncharacterized protein LOC111483317 OS=Cucurbita maxima OX=3661 GN=LOC111483317...	[more]
A0A6J1FVH7	2.78e-43	81.61	uncharacterized protein LOC111447671 OS=Cucurbita moschata OX=3662 GN=LOC1114476...	[more]

BLAST of MC10g0969 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G10265.1	4.8e-15	54.76	Wound-responsive family protein	[more]
AT4G10270.1	2.0e-13	47.19	Wound-responsive family protein	[more]
AT4G33560.1	8.5e-12	43.18	Wound-responsive family protein	[more]
AT2G14070.1	3.1e-06	37.78	wound-responsive protein-related	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022251	Protein of unknown function wound-induced	PFAM	PF12609	DUF3774	coord: 9..82 e-value: 4.6E-26 score: 91.6
IPR022251	Protein of unknown function wound-induced	PANTHER	PTHR33090	DUF3774 DOMAIN PROTEIN-RELATED	coord: 1..87
None	No IPR available	PANTHER	PTHR33090:SF69	WOUND-RESPONSIVE FAMILY PROTEIN	coord: 1..87

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC10g0969.1	MC10g0969.1	mRNA