MC10g0965 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC10g0965
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Chlorophyll a-b binding protein, chloroplastic
Location	MC10: 8486767 .. 8488847 (-)
RNA-Seq Expression	MC10g0965
Synteny	MC10g0965

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5polypeptideCDSutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

GGAAATTTGTTTTCTTAGTCATATTTACTGACCTCTAAAATTTGGGGGCTATTTATTTATTTTTTTTAAACAAAGAAAATTATCCTTTTTTTCTATATTTTTTTTAATGCAAAAGGGAATTTTTTGTAGGAAGGAAAAAAAAAAGTGGAGTAGATAAGATGTGGATAGAAAGAGATGAGGTGAAGATACTTAAAATCTTTAGAAGGCTTGTGATTGGCTAACACAACCCTCTCATTACCCCCACAAAAATTTCTCAATCCTTCAATTCAATTCTCCACCACCCATTTGTTTCATAATATTCCCCCACTGCGTCCTTCTCTCTCTCACTTCCACCGCAGCCCTTCTCAGAACCATCCACAGAGAGCTCCAATGGCCGCCACCGCCACCTCCACCGCCCTTCTCCGGCCGACCCCTTTTCTCGGCCAGGCCAGAGGGTCGCCGCAGAACCCCCTCAGAGATGTCGTCGCCATGGGGACTGCCAAATACACCATGGTCTCATCTCTCTGTAGATTTCTTTCTTTTTGTGCGACTCTGTTTTGTTTTGTTTTTGGGTGTTGAAGAAACTAATTTTTAAATCGTTGTGAAATAGGGAAATGATCTGTGGTATGGGCCGGACAGAGTGAAGTACTTGGGGCCGTTTTCAGCCCAGACTCCGTCGTACTTGAACGGAGAGTTCCCAGGCGACTATGGATGGGACACTGCTGGGTTGTCCGCTGATCCAGAGGCCTTCGCCAAGAACAGAGCTCTTGAGGTAATTACTAATTTTGTCCCAAATTTGCTTTTTCTGTGGTGAAATTATTAGTAATTTGATCCAATGGTGTTAAATGGGTTGATAATCGGGTCTTCTTGAGCCTTGAATCTTGAATCTTTAATGGTTAAAAGGCCTAGAGAGTACGGACACGGACAGGTTACCACAAACCGGTAGTTATTGGAGTCACCATTTCTTTAATTTGAAGTGATTGATCCTGATCTTTTGAATCCATCTTTTCAAACTATACATATGAATGATAGGATTTCAGAAAAATAAGCCTTTGACTTAGCTACCGAATCCACGCGGCGATTTAACGTTTTGAGTTCAGTTGTGATTCATCATAGCACTAGAACAAGAGGTTTTATGTTCGAAGAGATGTAGAGTTCATTTTTTTTCTAATTGATATTGATAACGATTTATTTGACCATATGCATATTTCTAAACTGTGTCGAGAAATGATTAAATTCACGGTAATCCATTCGCTTAAGCTTTTGTACTCAATGTGATTGTATAACAAAGAGAACGAAATTGCAGGTGATCCATGGGAGGTGGGCAATGTTGGGAGCTCTAGGGTGCATTACGCCGGAAGTGCTGGGAAAATGGTTGAGAGTGGAGTTTAAAGAGCCAGTGTGGTTTAAGGCTGGTGCCCAAATCTTCTCGGAGGGTGGGCTGGACTACTTGGGCAACCCAAACCTGGTCCACGCCCAGAGCATCCTGGCCGTGCTAGGCTTCCAAGTGGTGCTAATGGGGCTCGTGGAGGGCTTCCGCATCAACGGCCTCGATGGTGTCGGTGAAGGCAACGACCTCTACCCCGGCGGGCAGTACTTCGACCCCCTCGGCCTGGCCGATGACCCCACCACATTCGCTGAGCTTAAGGTCAAGGAGATCAAGAACGGGCGGCTCGCCATGTTCTCCATGTTCGGGTTCTTTGTTCAGGCCATTGTCACTGGAAAGGGCCCACTTGAGAACCTTCTCGACCATTTGGATAACCCAGTGGCTAACAATGCTTGGGTTTATGCCACCAAATTTGCGCCAGGTTCATAGACACACATTCAATCTGGTGGGACTGGGAATTCAACAATTTGAAGTTTGTGTAAATTGTTTCTACTTCCTTTTTGGTGTGAATGTGATTTATTAGAAAGTTGAGTAACTTGGATCAATGGACATTCCCACTTGATCGAATGAAGTTTCTTGATCTTACTTCGATGATTGAATTAAATCTAATTTAATTAATATAAATAAAATTAGATGTGTGAACATAGACGAATTATTACGTTGACCTTATTAACTCCTCAATACTTTTCGTTACATATCTAATTCTAATTCAATC

mRNA sequence

GGAAATTTGTTTTCTTAGTCATATTTACTGACCTCTAAAATTTGGGGGCTATTTATTTATTTTTTTTAAACAAAGAAAATTATCCTTTTTTTCTATATTTTTTTTAATGCAAAAGGGAATTTTTTGTAGGAAGGAAAAAAAAAAGTGGAGTAGATAAGATGTGGATAGAAAGAGATGAGGTGAAGATACTTAAAATCTTTAGAAGGCTTGTGATTGGCTAACACAACCCTCTCATTACCCCCACAAAAATTTCTCAATCCTTCAATTCAATTCTCCACCACCCATTTGTTTCATAATATTCCCCCACTGCGTCCTTCTCTCTCTCACTTCCACCGCAGCCCTTCTCAGAACCATCCACAGAGAGCTCCAATGGCCGCCACCGCCACCTCCACCGCCCTTCTCCGGCCGACCCCTTTTCTCGGCCAGGCCAGAGGGTCGCCGCAGAACCCCCTCAGAGATGTCGTCGCCATGGGGACTGCCAAATACACCATGGGAAATGATCTGTGGTATGGGCCGGACAGAGTGAAGTACTTGGGGCCGTTTTCAGCCCAGACTCCGTCGTACTTGAACGGAGAGTTCCCAGGCGACTATGGATGGGACACTGCTGGGTTGTCCGCTGATCCAGAGGCCTTCGCCAAGAACAGAGCTCTTGAGGTGATCCATGGGAGGTGGGCAATGTTGGGAGCTCTAGGGTGCATTACGCCGGAAGTGCTGGGAAAATGGTTGAGAGTGGAGTTTAAAGAGCCAGTGTGGTTTAAGGCTGGTGCCCAAATCTTCTCGGAGGGTGGGCTGGACTACTTGGGCAACCCAAACCTGGTCCACGCCCAGAGCATCCTGGCCGTGCTAGGCTTCCAAGTGGTGCTAATGGGGCTCGTGGAGGGCTTCCGCATCAACGGCCTCGATGGTGTCGGTGAAGGCAACGACCTCTACCCCGGCGGGCAGTACTTCGACCCCCTCGGCCTGGCCGATGACCCCACCACATTCGCTGAGCTTAAGGTCAAGGAGATCAAGAACGGGCGGCTCGCCATGTTCTCCATGTTCGGGTTCTTTGTTCAGGCCATTGTCACTGGAAAGGGCCCACTTGAGAACCTTCTCGACCATTTGGATAACCCAGTGGCTAACAATGCTTGGGTTTATGCCACCAAATTTGCGCCAGGTTCATAGACACACATTCAATCTGGTGGGACTGGGAATTCAACAATTTGAAGTTTGTGTAAATTGTTTCTACTTCCTTTTTGGTGTGAATGTGATTTATTAGAAAGTTGAGTAACTTGGATCAATGGACATTCCCACTTGATCGAATGAAGTTTCTTGATCTTACTTCGATGATTGAATTAAATCTAATTTAATTAATATAAATAAAATTAGATGTGTGAACATAGACGAATTATTACGTTGACCTTATTAACTCCTCAATACTTTTCGTTACATATCTAATTCTAATTCAATC

Coding sequence (CDS)

ATGGCCGCCACCGCCACCTCCACCGCCCTTCTCCGGCCGACCCCTTTTCTCGGCCAGGCCAGAGGGTCGCCGCAGAACCCCCTCAGAGATGTCGTCGCCATGGGGACTGCCAAATACACCATGGGAAATGATCTGTGGTATGGGCCGGACAGAGTGAAGTACTTGGGGCCGTTTTCAGCCCAGACTCCGTCGTACTTGAACGGAGAGTTCCCAGGCGACTATGGATGGGACACTGCTGGGTTGTCCGCTGATCCAGAGGCCTTCGCCAAGAACAGAGCTCTTGAGGTGATCCATGGGAGGTGGGCAATGTTGGGAGCTCTAGGGTGCATTACGCCGGAAGTGCTGGGAAAATGGTTGAGAGTGGAGTTTAAAGAGCCAGTGTGGTTTAAGGCTGGTGCCCAAATCTTCTCGGAGGGTGGGCTGGACTACTTGGGCAACCCAAACCTGGTCCACGCCCAGAGCATCCTGGCCGTGCTAGGCTTCCAAGTGGTGCTAATGGGGCTCGTGGAGGGCTTCCGCATCAACGGCCTCGATGGTGTCGGTGAAGGCAACGACCTCTACCCCGGCGGGCAGTACTTCGACCCCCTCGGCCTGGCCGATGACCCCACCACATTCGCTGAGCTTAAGGTCAAGGAGATCAAGAACGGGCGGCTCGCCATGTTCTCCATGTTCGGGTTCTTTGTTCAGGCCATTGTCACTGGAAAGGGCCCACTTGAGAACCTTCTCGACCATTTGGATAACCCAGTGGCTAACAATGCTTGGGTTTATGCCACCAAATTTGCGCCAGGTTCATAG

Protein sequence

MAATATSTALLRPTPFLGQARGSPQNPLRDVVAMGTAKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLGKWLRVEFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS

Homology

[Close]

BLAST of MC10g0965 vs. ExPASy Swiss-Prot
Match: P27489 (Chlorophyll a-b binding protein 13, chloroplastic OS=Solanum lycopersicum OX=4081 GN=CAB13 PE=1 SV=1)

HSP 1 Score: 505.8 bits (1301), Expect = 3.0e-142
Identity = 238/264 (90.15%), Postives = 253/264 (95.83%), Query Frame = 0


Query: 1   MAATATSTALLRPTPFLGQARGSPQNPLRDVVAMGTAKYTMGNDLWYGPDRVKYLGPFSA 60
           MAATA+ST +++ TPFLGQ + +  NPLRDVVAMG+A++TM NDLWYGPDRVKYLGPFSA
Sbjct: 4   MAATASSTTVVKATPFLGQTKNA--NPLRDVVAMGSARFTMSNDLWYGPDRVKYLGPFSA 63

Query: 61  QTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLGKWLR 120
           QTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCI PEVL KW++
Sbjct: 64  QTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCIFPEVLEKWVK 123

Query: 121 VEFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGV 180
           V+FKEPVWFKAG+QIFS+GGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGL GV
Sbjct: 124 VDFKEPVWFKAGSQIFSDGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGV 183

Query: 181 GEGNDLYPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEN 240
           GEGNDLYPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEN
Sbjct: 184 GEGNDLYPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEN 243

Query: 241 LLDHLDNPVANNAWVYATKFAPGS 265
           LLDHLDNPVANNAWVYATKF PG+
Sbjct: 244 LLDHLDNPVANNAWVYATKFVPGA 265

[Close]

BLAST of MC10g0965 vs. ExPASy Swiss-Prot
Match: Q9S7M0 (Chlorophyll a-b binding protein 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCB3 PE=1 SV=1)

HSP 1 Score: 501.5 bits (1290), Expect = 5.7e-141
Identity = 236/265 (89.06%), Postives = 250/265 (94.34%), Query Frame = 0


Query: 1   MAATAT-STALLRPTPFLGQARGSPQNPLRDVVAMGTAKYTMGNDLWYGPDRVKYLGPFS 60
           MA+T T S+++L PT FLGQ + S  NPLRDVV++G+ KYTMGNDLWYGPDRVKYLGPFS
Sbjct: 1   MASTFTSSSSVLTPTTFLGQTKASSFNPLRDVVSLGSPKYTMGNDLWYGPDRVKYLGPFS 60

Query: 61  AQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLGKWL 120
            QTPSYL GEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGA GCITPEVL KW+
Sbjct: 61  VQTPSYLTGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGAFGCITPEVLQKWV 120

Query: 121 RVEFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDG 180
           RV+FKEPVWFKAG+QIFSEGGLDYLGNPNLVHAQSILAVLGFQV+LMGLVEGFRINGLDG
Sbjct: 121 RVDFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVILMGLVEGFRINGLDG 180

Query: 181 VGEGNDLYPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           VGEGNDLYPGGQYFDPLGLADDP TFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 VGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLLDHLDNPVANNAWVYATKFAPGS 265
           NLLDHLDNPVANNAW +ATKFAPG+
Sbjct: 241 NLLDHLDNPVANNAWAFATKFAPGA 265

[Close]

BLAST of MC10g0965 vs. ExPASy Swiss-Prot
Match: P27523 (Chlorophyll a-b binding protein of LHCII type III, chloroplastic OS=Hordeum vulgare OX=4513 GN=LHBC PE=2 SV=1)

HSP 1 Score: 483.4 bits (1243), Expect = 1.6e-135
Identity = 231/268 (86.19%), Postives = 245/268 (91.42%), Query Frame = 0


Query: 1   MAAT---ATSTALLRPTPFL-GQARGSPQNPLRDVVAMGTAKYTMGNDLWYGPDRVKYLG 60
           MA+T   A S A++  TPFL GQ R +  +PLRD+ A    + TMGNDLWYGPDRVKYLG
Sbjct: 1   MASTIMAAASRAVVAKTPFLSGQGRAASASPLRDIAAATNGRITMGNDLWYGPDRVKYLG 60

Query: 61  PFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLG 120
           PFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFA+NRALEVIHGRWAMLGALGC+ PEVL 
Sbjct: 61  PFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCVFPEVLQ 120

Query: 121 KWLRVEFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRING 180
           KW+ VEFKEPVWFKAG+QIFSEGGLDYLGNPNLVHAQSILAVLGFQV+LMGLVEGFRING
Sbjct: 121 KWVGVEFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGLVEGFRING 180

Query: 181 LDGVGEGNDLYPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 240
           LDGVGEGNDLYPGGQYFDPLGLADDP TFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 181 LDGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 240

Query: 241 PLENLLDHLDNPVANNAWVYATKFAPGS 265
           PLENL DHLD+PVANNAWV+ATKFAPGS
Sbjct: 241 PLENLFDHLDDPVANNAWVFATKFAPGS 268

[Close]

BLAST of MC10g0965 vs. ExPASy Swiss-Prot
Match: P14278 (Chlorophyll a-b binding protein 4, chloroplastic OS=Solanum lycopersicum OX=4081 GN=CAB4 PE=2 SV=1)

HSP 1 Score: 370.5 bits (950), Expect = 1.5e-101
Identity = 186/266 (69.92%), Postives = 208/266 (78.20%), Query Frame = 0


Query: 7   STALLRPTPFLGQARGSPQNP-LRDVVAMGTAKYTM-------GNDLWYGPDRVKYLGPF 66
           +T  ++ + F+GQA G  QN  +R V   G  + TM          +WYG DR KYLGPF
Sbjct: 2   ATCAIQQSAFVGQAVGKSQNEFIRKVGNFGEGRITMRRTVKSAPQSIWYGEDRPKYLGPF 61

Query: 67  SAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLGKW 126
           S QTPSYL GEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLGALGC+ PE+L K 
Sbjct: 62  SEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSK- 121

Query: 127 LRVEFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLD 186
             V+F E VWFKAG+QIFSEGGLDYLGNPNLVHAQSILA+   QVVLMG VEG+R+ G  
Sbjct: 122 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGG-G 181

Query: 187 GVGEGND-LYPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 246
            +GEG D +YPGG  FDPLGLADDP  FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 182 PLGEGLDKIYPGGA-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 241

Query: 247 LENLLDHLDNPVANNAWVYATKFAPG 264
           +ENL DH+++PVANNAW YAT F PG
Sbjct: 242 IENLSDHINDPVANNAWAYATNFVPG 264

[Close]

BLAST of MC10g0965 vs. ExPASy Swiss-Prot
Match: A2XJ35 (Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. indica OX=39946 GN=OsI_012078 PE=2 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 2.9e-100
Identity = 186/269 (69.14%), Postives = 205/269 (76.21%), Query Frame = 0


Query: 7   STALLRPTPFLGQARGSPQNPLRDV-----------VAMGTAKYTMGNDLWYGPDRVKYL 66
           ++AL + T FLG A      P RD            + M     +    +WYGPDR KYL
Sbjct: 3   ASALHQTTSFLGTA------PRRDELVRRVGDSGGRITMRRTVKSAPQSIWYGPDRPKYL 62

Query: 67  GPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVL 126
           GPFS QTPSYL GEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLGALGC+ PE+L
Sbjct: 63  GPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEIL 122

Query: 127 GKWLRVEFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRIN 186
            K   V+F E VWFKAGAQIFSEGGLDYLGNPNLVHAQSILA+   QVVLMG VEG+R+ 
Sbjct: 123 SK-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRVG 182

Query: 187 GLDGVGEGND-LYPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 246
           G   +GEG D +YPGG  FDPLGLADDP TFAELKVKE+KNGRLAMFSMFGFFVQAIVTG
Sbjct: 183 G-GPLGEGLDKVYPGGA-FDPLGLADDPDTFAELKVKELKNGRLAMFSMFGFFVQAIVTG 242

Query: 247 KGPLENLLDHLDNPVANNAWVYATKFAPG 264
           KGP+ENL DH+ +PVANNAW YAT F PG
Sbjct: 243 KGPIENLFDHVADPVANNAWAYATNFVPG 262

[Close]

BLAST of MC10g0965 vs. NCBI nr
Match: XP_022142746.1 (chlorophyll a-b binding protein 13, chloroplastic [Momordica charantia])

HSP 1 Score: 549 bits (1415), Expect = 1.76e-197
Identity = 264/264 (100.00%), Postives = 264/264 (100.00%), Query Frame = 0


Query: 1   MAATATSTALLRPTPFLGQARGSPQNPLRDVVAMGTAKYTMGNDLWYGPDRVKYLGPFSA 60
           MAATATSTALLRPTPFLGQARGSPQNPLRDVVAMGTAKYTMGNDLWYGPDRVKYLGPFSA
Sbjct: 1   MAATATSTALLRPTPFLGQARGSPQNPLRDVVAMGTAKYTMGNDLWYGPDRVKYLGPFSA 60

Query: 61  QTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLGKWLR 120
           QTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLGKWLR
Sbjct: 61  QTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLGKWLR 120

Query: 121 VEFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGV 180
           VEFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGV
Sbjct: 121 VEFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGV 180

Query: 181 GEGNDLYPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEN 240
           GEGNDLYPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEN
Sbjct: 181 GEGNDLYPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEN 240

Query: 241 LLDHLDNPVANNAWVYATKFAPGS 264
           LLDHLDNPVANNAWVYATKFAPGS
Sbjct: 241 LLDHLDNPVANNAWVYATKFAPGS 264

[Close]

BLAST of MC10g0965 vs. NCBI nr
Match: XP_022929511.1 (chlorophyll a-b binding protein 13, chloroplastic [Cucurbita moschata])

HSP 1 Score: 530 bits (1365), Expect = 7.40e-190
Identity = 254/264 (96.21%), Postives = 256/264 (96.97%), Query Frame = 0


Query: 1   MAATATSTALLRPTPFLGQARGSPQNPLRDVVAMGTAKYTMGNDLWYGPDRVKYLGPFSA 60
           MAATATST LLR TPFLGQ R SPQNPLRDVVAMGT KYTMGNDLWYGPDRVKYLGPFSA
Sbjct: 1   MAATATSTGLLRATPFLGQTRSSPQNPLRDVVAMGTPKYTMGNDLWYGPDRVKYLGPFSA 60

Query: 61  QTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLGKWLR 120
           QTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGA GCITPEVL KWL+
Sbjct: 61  QTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGAFGCITPEVLEKWLK 120

Query: 121 VEFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGV 180
           V+FKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGV
Sbjct: 121 VDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGV 180

Query: 181 GEGNDLYPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEN 240
           GEGNDLYPGGQYFDPLGLADDP TFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEN
Sbjct: 181 GEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEN 240

Query: 241 LLDHLDNPVANNAWVYATKFAPGS 264
           LLDHLDNPVANNAWVYATKFAPGS
Sbjct: 241 LLDHLDNPVANNAWVYATKFAPGS 264

[Close]

BLAST of MC10g0965 vs. NCBI nr
Match: XP_022985252.1 (chlorophyll a-b binding protein 13, chloroplastic [Cucurbita maxima])

HSP 1 Score: 529 bits (1362), Expect = 2.12e-189
Identity = 253/264 (95.83%), Postives = 256/264 (96.97%), Query Frame = 0


Query: 1   MAATATSTALLRPTPFLGQARGSPQNPLRDVVAMGTAKYTMGNDLWYGPDRVKYLGPFSA 60
           MAATAT+T LLR TPFLGQ R SPQNPLRDVVAMGT KYTMGNDLWYGPDRVKYLGPFSA
Sbjct: 1   MAATATATGLLRATPFLGQTRSSPQNPLRDVVAMGTPKYTMGNDLWYGPDRVKYLGPFSA 60

Query: 61  QTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLGKWLR 120
           QTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGA GCITPEVL KWL+
Sbjct: 61  QTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGAFGCITPEVLEKWLK 120

Query: 121 VEFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGV 180
           V+FKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGV
Sbjct: 121 VDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGV 180

Query: 181 GEGNDLYPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEN 240
           GEGNDLYPGGQYFDPLGLADDP TFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEN
Sbjct: 181 GEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEN 240

Query: 241 LLDHLDNPVANNAWVYATKFAPGS 264
           LLDHLDNPVANNAWVYATKFAPGS
Sbjct: 241 LLDHLDNPVANNAWVYATKFAPGS 264

[Close]

BLAST of MC10g0965 vs. NCBI nr
Match: XP_008452292.1 (PREDICTED: chlorophyll a-b binding protein 13, chloroplastic [Cucumis melo] >KAA0046876.1 chlorophyll a-b binding protein 13 [Cucumis melo var. makuwa] >TYK03270.1 chlorophyll a-b binding protein 13 [Cucumis melo var. makuwa])

HSP 1 Score: 528 bits (1360), Expect = 4.28e-189
Identity = 252/264 (95.45%), Postives = 256/264 (96.97%), Query Frame = 0


Query: 1   MAATATSTALLRPTPFLGQARGSPQNPLRDVVAMGTAKYTMGNDLWYGPDRVKYLGPFSA 60
           MA+TATS  LLR TPFLGQ RGSPQNPLRD VAMGT KYTMGNDLWYGPDRVKYLGPFSA
Sbjct: 1   MASTATSATLLRATPFLGQTRGSPQNPLRDFVAMGTGKYTMGNDLWYGPDRVKYLGPFSA 60

Query: 61  QTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLGKWLR 120
           QTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVL KWL+
Sbjct: 61  QTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWLK 120

Query: 121 VEFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGV 180
           V+FKEPVWFKAGAQIF+EGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGV
Sbjct: 121 VDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGV 180

Query: 181 GEGNDLYPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEN 240
           GEGNDLYPGGQYFDPLGLADDP TFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEN
Sbjct: 181 GEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEN 240

Query: 241 LLDHLDNPVANNAWVYATKFAPGS 264
           LLDHLDNPVANNAWVYATKFAPGS
Sbjct: 241 LLDHLDNPVANNAWVYATKFAPGS 264

[Close]

BLAST of MC10g0965 vs. NCBI nr
Match: KAG6577394.1 (Chlorophyll a-b binding protein 3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 530 bits (1365), Expect = 4.43e-188
Identity = 254/264 (96.21%), Postives = 256/264 (96.97%), Query Frame = 0


Query: 1   MAATATSTALLRPTPFLGQARGSPQNPLRDVVAMGTAKYTMGNDLWYGPDRVKYLGPFSA 60
           MAATATST LLR TPFLGQ R SPQNPLRDVVAMGT KYTMGNDLWYGPDRVKYLGPFSA
Sbjct: 1   MAATATSTGLLRATPFLGQTRSSPQNPLRDVVAMGTPKYTMGNDLWYGPDRVKYLGPFSA 60

Query: 61  QTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLGKWLR 120
           QTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGA GCITPEVL KWL+
Sbjct: 61  QTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGAFGCITPEVLEKWLK 120

Query: 121 VEFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGV 180
           V+FKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGV
Sbjct: 121 VDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGV 180

Query: 181 GEGNDLYPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEN 240
           GEGNDLYPGGQYFDPLGLADDP TFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEN
Sbjct: 181 GEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEN 240

Query: 241 LLDHLDNPVANNAWVYATKFAPGS 264
           LLDHLDNPVANNAWVYATKFAPGS
Sbjct: 241 LLDHLDNPVANNAWVYATKFAPGS 264

[Close]

BLAST of MC10g0965 vs. ExPASy TrEMBL
Match: A0A6J1CN44 (Chlorophyll a-b binding protein, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111012787 PE=3 SV=1)

HSP 1 Score: 549 bits (1415), Expect = 8.52e-198
Identity = 264/264 (100.00%), Postives = 264/264 (100.00%), Query Frame = 0


Query: 1   MAATATSTALLRPTPFLGQARGSPQNPLRDVVAMGTAKYTMGNDLWYGPDRVKYLGPFSA 60
           MAATATSTALLRPTPFLGQARGSPQNPLRDVVAMGTAKYTMGNDLWYGPDRVKYLGPFSA
Sbjct: 1   MAATATSTALLRPTPFLGQARGSPQNPLRDVVAMGTAKYTMGNDLWYGPDRVKYLGPFSA 60

Query: 61  QTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLGKWLR 120
           QTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLGKWLR
Sbjct: 61  QTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLGKWLR 120

Query: 121 VEFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGV 180
           VEFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGV
Sbjct: 121 VEFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGV 180

Query: 181 GEGNDLYPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEN 240
           GEGNDLYPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEN
Sbjct: 181 GEGNDLYPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEN 240

Query: 241 LLDHLDNPVANNAWVYATKFAPGS 264
           LLDHLDNPVANNAWVYATKFAPGS
Sbjct: 241 LLDHLDNPVANNAWVYATKFAPGS 264

[Close]

BLAST of MC10g0965 vs. ExPASy TrEMBL
Match: A0A6J1ENC1 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111436057 PE=3 SV=1)

HSP 1 Score: 530 bits (1365), Expect = 3.58e-190
Identity = 254/264 (96.21%), Postives = 256/264 (96.97%), Query Frame = 0


Query: 1   MAATATSTALLRPTPFLGQARGSPQNPLRDVVAMGTAKYTMGNDLWYGPDRVKYLGPFSA 60
           MAATATST LLR TPFLGQ R SPQNPLRDVVAMGT KYTMGNDLWYGPDRVKYLGPFSA
Sbjct: 1   MAATATSTGLLRATPFLGQTRSSPQNPLRDVVAMGTPKYTMGNDLWYGPDRVKYLGPFSA 60

Query: 61  QTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLGKWLR 120
           QTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGA GCITPEVL KWL+
Sbjct: 61  QTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGAFGCITPEVLEKWLK 120

Query: 121 VEFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGV 180
           V+FKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGV
Sbjct: 121 VDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGV 180

Query: 181 GEGNDLYPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEN 240
           GEGNDLYPGGQYFDPLGLADDP TFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEN
Sbjct: 181 GEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEN 240

Query: 241 LLDHLDNPVANNAWVYATKFAPGS 264
           LLDHLDNPVANNAWVYATKFAPGS
Sbjct: 241 LLDHLDNPVANNAWVYATKFAPGS 264

[Close]

BLAST of MC10g0965 vs. ExPASy TrEMBL
Match: A0A6J1J4D4 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111483299 PE=3 SV=1)

HSP 1 Score: 529 bits (1362), Expect = 1.03e-189
Identity = 253/264 (95.83%), Postives = 256/264 (96.97%), Query Frame = 0


Query: 1   MAATATSTALLRPTPFLGQARGSPQNPLRDVVAMGTAKYTMGNDLWYGPDRVKYLGPFSA 60
           MAATAT+T LLR TPFLGQ R SPQNPLRDVVAMGT KYTMGNDLWYGPDRVKYLGPFSA
Sbjct: 1   MAATATATGLLRATPFLGQTRSSPQNPLRDVVAMGTPKYTMGNDLWYGPDRVKYLGPFSA 60

Query: 61  QTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLGKWLR 120
           QTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGA GCITPEVL KWL+
Sbjct: 61  QTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGAFGCITPEVLEKWLK 120

Query: 121 VEFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGV 180
           V+FKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGV
Sbjct: 121 VDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGV 180

Query: 181 GEGNDLYPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEN 240
           GEGNDLYPGGQYFDPLGLADDP TFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEN
Sbjct: 181 GEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEN 240

Query: 241 LLDHLDNPVANNAWVYATKFAPGS 264
           LLDHLDNPVANNAWVYATKFAPGS
Sbjct: 241 LLDHLDNPVANNAWVYATKFAPGS 264

[Close]

BLAST of MC10g0965 vs. ExPASy TrEMBL
Match: A0A5A7TY25 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold298G00970 PE=3 SV=1)

HSP 1 Score: 528 bits (1360), Expect = 2.07e-189
Identity = 252/264 (95.45%), Postives = 256/264 (96.97%), Query Frame = 0


Query: 1   MAATATSTALLRPTPFLGQARGSPQNPLRDVVAMGTAKYTMGNDLWYGPDRVKYLGPFSA 60
           MA+TATS  LLR TPFLGQ RGSPQNPLRD VAMGT KYTMGNDLWYGPDRVKYLGPFSA
Sbjct: 1   MASTATSATLLRATPFLGQTRGSPQNPLRDFVAMGTGKYTMGNDLWYGPDRVKYLGPFSA 60

Query: 61  QTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLGKWLR 120
           QTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVL KWL+
Sbjct: 61  QTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWLK 120

Query: 121 VEFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGV 180
           V+FKEPVWFKAGAQIF+EGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGV
Sbjct: 121 VDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGV 180

Query: 181 GEGNDLYPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEN 240
           GEGNDLYPGGQYFDPLGLADDP TFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEN
Sbjct: 181 GEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEN 240

Query: 241 LLDHLDNPVANNAWVYATKFAPGS 264
           LLDHLDNPVANNAWVYATKFAPGS
Sbjct: 241 LLDHLDNPVANNAWVYATKFAPGS 264

[Close]

BLAST of MC10g0965 vs. ExPASy TrEMBL
Match: A0A1S3BUM8 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103493363 PE=3 SV=1)

HSP 1 Score: 528 bits (1360), Expect = 2.07e-189
Identity = 252/264 (95.45%), Postives = 256/264 (96.97%), Query Frame = 0


Query: 1   MAATATSTALLRPTPFLGQARGSPQNPLRDVVAMGTAKYTMGNDLWYGPDRVKYLGPFSA 60
           MA+TATS  LLR TPFLGQ RGSPQNPLRD VAMGT KYTMGNDLWYGPDRVKYLGPFSA
Sbjct: 1   MASTATSATLLRATPFLGQTRGSPQNPLRDFVAMGTGKYTMGNDLWYGPDRVKYLGPFSA 60

Query: 61  QTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLGKWLR 120
           QTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVL KWL+
Sbjct: 61  QTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWLK 120

Query: 121 VEFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGV 180
           V+FKEPVWFKAGAQIF+EGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGV
Sbjct: 121 VDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGV 180

Query: 181 GEGNDLYPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEN 240
           GEGNDLYPGGQYFDPLGLADDP TFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEN
Sbjct: 181 GEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEN 240

Query: 241 LLDHLDNPVANNAWVYATKFAPGS 264
           LLDHLDNPVANNAWVYATKFAPGS
Sbjct: 241 LLDHLDNPVANNAWVYATKFAPGS 264

[Close]

BLAST of MC10g0965 vs. TAIR 10
Match: AT5G54270.1 (light-harvesting chlorophyll B-binding protein 3 )

HSP 1 Score: 501.5 bits (1290), Expect = 4.1e-142
Identity = 236/265 (89.06%), Postives = 250/265 (94.34%), Query Frame = 0


Query: 1   MAATAT-STALLRPTPFLGQARGSPQNPLRDVVAMGTAKYTMGNDLWYGPDRVKYLGPFS 60
           MA+T T S+++L PT FLGQ + S  NPLRDVV++G+ KYTMGNDLWYGPDRVKYLGPFS
Sbjct: 1   MASTFTSSSSVLTPTTFLGQTKASSFNPLRDVVSLGSPKYTMGNDLWYGPDRVKYLGPFS 60

Query: 61  AQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLGKWL 120
            QTPSYL GEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGA GCITPEVL KW+
Sbjct: 61  VQTPSYLTGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGAFGCITPEVLQKWV 120

Query: 121 RVEFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDG 180
           RV+FKEPVWFKAG+QIFSEGGLDYLGNPNLVHAQSILAVLGFQV+LMGLVEGFRINGLDG
Sbjct: 121 RVDFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVILMGLVEGFRINGLDG 180

Query: 181 VGEGNDLYPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           VGEGNDLYPGGQYFDPLGLADDP TFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 VGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLLDHLDNPVANNAWVYATKFAPGS 265
           NLLDHLDNPVANNAW +ATKFAPG+
Sbjct: 241 NLLDHLDNPVANNAWAFATKFAPGA 265

[Close]

BLAST of MC10g0965 vs. TAIR 10
Match: AT2G05100.1 (photosystem II light harvesting complex gene 2.1 )

HSP 1 Score: 363.2 bits (931), Expect = 1.7e-100
Identity = 182/267 (68.16%), Postives = 204/267 (76.40%), Query Frame = 0


Query: 7   STALLRPTPFLGQARGSPQNP-LRDVVAMGTAKYTM-------GNDLWYGPDRVKYLGPF 66
           +T+ ++ + F GQ    P N  LR V   G  + TM          +WYGPDR KYLGPF
Sbjct: 2   ATSAIQQSSFAGQTALKPSNELLRKVGVSGGGRVTMRRTVKSTPQSIWYGPDRPKYLGPF 61

Query: 67  SAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLGKW 126
           S  TPSYL GE+PGDYGWDTAGLSADPE FAKNR LEVIH RWAMLGALGC  PE+L K 
Sbjct: 62  SENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEILSK- 121

Query: 127 LRVEFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLD 186
             V+F E VWFKAG+QIFSEGGLDYLGNPNL+HAQSILA+   QVVLMG +EG+RI G  
Sbjct: 122 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAVQVVLMGFIEGYRIGG-G 181

Query: 187 GVGEGND-LYPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 246
            +GEG D LYPGG  FDPL LA+DP  F+ELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 182 PLGEGLDPLYPGGA-FDPLNLAEDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 241

Query: 247 LENLLDHLDNPVANNAWVYATKFAPGS 265
           +ENL DHL +PVANNAW YAT F PG+
Sbjct: 242 IENLFDHLADPVANNAWSYATNFVPGN 265

[Close]

BLAST of MC10g0965 vs. TAIR 10
Match: AT2G05070.1 (photosystem II light harvesting complex gene 2.2 )

HSP 1 Score: 360.5 bits (924), Expect = 1.1e-99
Identity = 180/266 (67.67%), Postives = 204/266 (76.69%), Query Frame = 0


Query: 7   STALLRPTPFLGQARGSPQNPL-RDVVAMGTAKYTM-------GNDLWYGPDRVKYLGPF 66
           +T+ ++ + F GQ    P + L + V  +G  + TM          +WYGPDR KYLGPF
Sbjct: 2   ATSAIQQSSFAGQTALKPSSDLIQKVGVLGGGRVTMRRTVKSTPQSIWYGPDRPKYLGPF 61

Query: 67  SAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLGKW 126
           S  TPSYL GE+PGDYGWDTAGLSADPE FAKNR LEVIH RWAMLGALGC  PE+L K 
Sbjct: 62  SENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEILSK- 121

Query: 127 LRVEFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLD 186
             V+F E VWFKAG+QIFSEGGLDYLGNPNL+HAQSILA+   QVVLMG +EG+RI G  
Sbjct: 122 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAVQVVLMGFIEGYRIGG-G 181

Query: 187 GVGEGND-LYPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 246
            +GEG D LYPGG  FDPL LA+DP  F+ELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 182 PLGEGLDPLYPGGA-FDPLNLAEDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 241

Query: 247 LENLLDHLDNPVANNAWVYATKFAPG 264
           +ENL DHL +PVANNAW YAT F PG
Sbjct: 242 IENLFDHLADPVANNAWSYATNFVPG 264

[Close]

BLAST of MC10g0965 vs. TAIR 10
Match: AT3G27690.1 (photosystem II light harvesting complex gene 2.3 )

HSP 1 Score: 357.8 bits (917), Expect = 7.3e-99
Identity = 179/268 (66.79%), Postives = 202/268 (75.37%), Query Frame = 0


Query: 7   STALLRPTPFLGQARGSPQNPL----------RDVVAMGTAKYTMGNDLWYGPDRVKYLG 66
           +T+ ++ + F GQ    P N L            ++   T K T    +WYGPDR KYLG
Sbjct: 2   ATSAIQHSSFAGQTTLKPSNDLLRKIGASNGGGRIIMRRTVKST-PQSIWYGPDRPKYLG 61

Query: 67  PFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLG 126
           PFS  TPSYL GE+PGDYGWDTAGLSADPE FAKNR LEVIH RWAMLGALGC  PE+L 
Sbjct: 62  PFSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEILS 121

Query: 127 KWLRVEFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRING 186
           K   V+F E VWFKAG+QIFSEGGLDYLGNPNL+HAQSILA+   QVVLMG +EG+RI G
Sbjct: 122 K-NGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFIEGYRIGG 181

Query: 187 LDGVGEGND-LYPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 246
              +GEG D LYPGG  FDPL LA+DP  F+ELKVKE+KNGRLAMFSMFGFFVQAIVTGK
Sbjct: 182 -GPLGEGLDPLYPGGA-FDPLNLAEDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTGK 241

Query: 247 GPLENLLDHLDNPVANNAWVYATKFAPG 264
           GP+ENL DH+ +PVANNAW YAT F PG
Sbjct: 242 GPIENLFDHIADPVANNAWAYATNFVPG 265

[Close]

BLAST of MC10g0965 vs. TAIR 10
Match: AT1G29910.1 (chlorophyll A/B binding protein 3 )

HSP 1 Score: 350.5 bits (898), Expect = 1.2e-96
Identity = 173/251 (68.92%), Postives = 197/251 (78.49%), Query Frame = 0


Query: 14  TPFLGQARGSPQNPLRDVVAMGTAKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGD 73
           +P   +  GS +  +R  VA    K   G+  WYG DRVKYLGPFS ++PSYL GEFPGD
Sbjct: 21  SPAASEVLGSGRVTMRKTVA--KPKGPSGSP-WYGSDRVKYLGPFSGESPSYLTGEFPGD 80

Query: 74  YGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLGKWLRVEFKEPVWFKAGA 133
           YGWDTAGLSADPE FA+NR LEVIH RWAMLGALGC+ PE+L +   V+F E VWFKAG+
Sbjct: 81  YGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGS 140

Query: 134 QIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGND-LYPGGQY 193
           QIFS+GGLDYLGNP+LVHAQSILA+   QV+LMG VEG+R+ G   +GE  D LYPGG  
Sbjct: 141 QIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGNGPLGEAEDLLYPGGS- 200

Query: 194 FDPLGLADDPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANN 253
           FDPLGLA DP  FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DHL +PV NN
Sbjct: 201 FDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNN 260

Query: 254 AWVYATKFAPG 264
           AW +AT F PG
Sbjct: 261 AWAFATNFVPG 266

The following BLAST results are available for this feature:

BLAST of MC10g0965 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P27489	3.0e-142	90.15	Chlorophyll a-b binding protein 13, chloroplastic OS=Solanum lycopersicum OX=408...	[more]
Q9S7M0	5.7e-141	89.06	Chlorophyll a-b binding protein 3, chloroplastic OS=Arabidopsis thaliana OX=3702...	[more]
P27523	1.6e-135	86.19	Chlorophyll a-b binding protein of LHCII type III, chloroplastic OS=Hordeum vulg...	[more]
P14278	1.5e-101	69.92	Chlorophyll a-b binding protein 4, chloroplastic OS=Solanum lycopersicum OX=4081...	[more]
A2XJ35	2.9e-100	69.14	Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. indica OX=...	[more]

BLAST of MC10g0965 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022142746.1	1.76e-197	100.00	chlorophyll a-b binding protein 13, chloroplastic [Momordica charantia]	[more]
XP_022929511.1	7.40e-190	96.21	chlorophyll a-b binding protein 13, chloroplastic [Cucurbita moschata]	[more]
XP_022985252.1	2.12e-189	95.83	chlorophyll a-b binding protein 13, chloroplastic [Cucurbita maxima]	[more]
XP_008452292.1	4.28e-189	95.45	PREDICTED: chlorophyll a-b binding protein 13, chloroplastic [Cucumis melo] >KAA...	[more]
KAG6577394.1	4.43e-188	96.21	Chlorophyll a-b binding protein 3, chloroplastic, partial [Cucurbita argyrosperm...	[more]

BLAST of MC10g0965 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CN44	8.52e-198	100.00	Chlorophyll a-b binding protein, chloroplastic OS=Momordica charantia OX=3673 GN...	[more]
A0A6J1ENC1	3.58e-190	96.21	Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1J4D4	1.03e-189	95.83	Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A5A7TY25	2.07e-189	95.45	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=11...	[more]
A0A1S3BUM8	2.07e-189	95.45	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103...	[more]

BLAST of MC10g0965 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G54270.1	4.1e-142	89.06	light-harvesting chlorophyll B-binding protein 3	[more]
AT2G05100.1	1.7e-100	68.16	photosystem II light harvesting complex gene 2.1	[more]
AT2G05070.1	1.1e-99	67.67	photosystem II light harvesting complex gene 2.2	[more]
AT3G27690.1	7.3e-99	66.79	photosystem II light harvesting complex gene 2.3	[more]
AT1G29910.1	1.2e-96	68.92	chlorophyll A/B binding protein 3	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023329	Chlorophyll a/b binding domain superfamily	GENE3D	1.10.3460.10	Chlorophyll a/b binding protein domain	coord: 53..257 e-value: 7.5E-92 score: 308.7
IPR022796	Chlorophyll A-B binding protein	PFAM	PF00504	Chloroa_b-bind	coord: 63..230 e-value: 4.1E-50 score: 170.5
IPR001344	Chlorophyll A-B binding protein, plant and chromista	PANTHER	PTHR21649	CHLOROPHYLL A/B BINDING PROTEIN	coord: 3..264
None	No IPR available	PANTHER	PTHR21649:SF129	CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC	coord: 3..264
None	No IPR available	SUPERFAMILY	103511	Chlorophyll a-b binding protein	coord: 45..261

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC10g0965.1	MC10g0965.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009768	photosynthesis, light harvesting in photosystem I
biological_process	GO:0009769	photosynthesis, light harvesting in photosystem II
biological_process	GO:0018298	protein-chromophore linkage
biological_process	GO:0010119	regulation of stomatal movement
biological_process	GO:0009737	response to abscisic acid
biological_process	GO:0009635	response to herbicide
biological_process	GO:0009644	response to high light intensity
biological_process	GO:0009765	photosynthesis, light harvesting
cellular_component	GO:0009522	photosystem I
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0009517	PSII associated light-harvesting complex II
cellular_component	GO:0016020	membrane
molecular_function	GO:0016168	chlorophyll binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0019904	protein domain specific binding