MC10g0959 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC10g0959
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Unknown protein
Location	MC10: 8456897 .. 8457889 (-)
RNA-Seq Expression	MC10g0959
Synteny	MC10g0959

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGTGTGGACGGCCGCGGCTCGCCGTATGGTTTCCTCTCACAAATCAGTTTCTACGCCTCAAATCGCCTCTCTAACCCTAAACCGCGGTCTCGCCGGCGGTGGCGGTATTTCCTCCCGCTCTTTCTATGTTCATAGTTTGTTTCTTATCTCGTTACTCCTTCCCTAACTGATGAGCAATTCGCGCCTAAACTGGATCATTTAGGGATGATTCGCTCACTAATTAGACTCGTGTAATTCGAAGTTTACAATAGTATCTGAGATTGCTATGTTTATCCCATATTATGAATTTAACACAAGTTACATAAACTGATTTTTATAACCTATTCATTTTTGTGAATTCAAACTCGGAATGAGTTTTTCTAAATTCAAGCAGCTTCATGAACTTCTGATTCATCATGTTTAAATGTTGGCCATATCTGGTTATCAAACTCTCGTGGTGAAGTAATTGATGAACTTGAATTGAATCTGCGAGTAATTTGCTTGTTCTGCTTTTGTAATCTTGCAGAACATCATGGATCCCCGAAGGTGAACTTTTGGGAGGATCCTCTTAATCCAACCAAATGGAAAAGAGAACATGTGAGCATTTTTTTAGTTTTTGAAATTGAGTATCATCCGTCCCTGTTTAAATTTCAAATGCTAGTTACTCATTCTACTCATGTCACTTGAACTCTGATTAATTCGTATCTTTCTACGAAGCACGAACTGTTTAGTTTGCATGTCTAACACGTGTCGGACACTCTAACACTTGTTTCACCACGTGTCACCAAATACATGTTAAAGATATTAATCAGCCGTTCGAAATATTTTCGAAATAATTATTAGACACATGGAGAATACTTGCATTGTCTTTGAGAATCACTGCACATCTTACTAAAGATATATGTACATTTTCCAGTTTGTGACTGTGTCTTTGACTGGAGGGGGTTTAGTTCTTTATGGGGGCTACGAGTTCTTCACCAGAGGCAAGAAGGAAGAGGTATGGCTTCTT

mRNA sequence

ATGGCGGTGTGGACGGCCGCGGCTCGCCGTATGGTTTCCTCTCACAAATCAGTTTCTACGCCTCAAATCGCCTCTCTAACCCTAAACCGCGGTCTCGCCGGCGGTGGCGAACATCATGGATCCCCGAAGGTGAACTTTTGGGAGGATCCTCTTAATCCAACCAAATGGAAAAGAGAACATTTTGTGACTGTGTCTTTGACTGGAGGGGGTTTAGTTCTTTATGGGGGCTACGAGTTCTTCACCAGAGGCAAGAAGGAAGAGGTATGGCTTCTT

Coding sequence (CDS)

ATGGCGGTGTGGACGGCCGCGGCTCGCCGTATGGTTTCCTCTCACAAATCAGTTTCTACGCCTCAAATCGCCTCTCTAACCCTAAACCGCGGTCTCGCCGGCGGTGGCGAACATCATGGATCCCCGAAGGTGAACTTTTGGGAGGATCCTCTTAATCCAACCAAATGGAAAAGAGAACATTTTGTGACTGTGTCTTTGACTGGAGGGGGTTTAGTTCTTTATGGGGGCTACGAGTTCTTCACCAGAGGCAAGAAGGAAGAGGTATGGCTTCTT

Protein sequence

MAVWTAAARRMVSSHKSVSTPQIASLTLNRGLAGGGEHHGSPKVNFWEDPLNPTKWKREHFVTVSLTGGGLVLYGGYEFFTRGKKEEVWLL

Homology

[Close]

BLAST of MC10g0959 vs. NCBI nr
Match: KAE8650170.1 (hypothetical protein Csa_010956 [Cucumis sativus])

HSP 1 Score: 156 bits (394), Expect = 1.85e-47
Identity = 70/90 (77.78%), Postives = 78/90 (86.67%), Query Frame = 0


Query: 1  MAVWTAAARRMVSSHKSVSTPQIASLTLNRGLAGGGEHHGSPKVNFWEDPLNPTKWKREH 60
          MA W AA RR++ SH S+STPQIASLT  RGLAGGG+HHG PKVNFWEDP NP++WKREH
Sbjct: 1  MAAWMAAPRRILLSHNSLSTPQIASLTHRRGLAGGGDHHGPPKVNFWEDPFNPSRWKREH 60

Query: 61 FVTVSLTGGGLVLYGGYEFFTRGKKEEVWL 90
          FV VSLTG GLVLYG Y+FFT+GKKEEVWL
Sbjct: 61 FVIVSLTGWGLVLYGAYDFFTKGKKEEVWL 90

[Close]

BLAST of MC10g0959 vs. NCBI nr
Match: KAA0046869.1 (hypothetical protein E6C27_scaffold230G00240 [Cucumis melo var. makuwa] >TYK03277.1 hypothetical protein E5676_scaffold298G001040 [Cucumis melo var. makuwa])

HSP 1 Score: 147 bits (370), Expect = 1.76e-43
Identity = 67/87 (77.01%), Postives = 73/87 (83.91%), Query Frame = 0


Query: 1  MAVWTAAARRMVSSHKSVSTPQIASLTLNRGLAGGGEHHGSPKVNFWEDPLNPTKWKREH 60
          MA WTAAARR+V SH SVSTPQ ASL   RGLAGG +HHG PKVNFWEDP NP++WK EH
Sbjct: 1  MAAWTAAARRIVLSHNSVSTPQFASLKHRRGLAGGADHHGPPKVNFWEDPFNPSRWKGEH 60

Query: 61 FVTVSLTGGGLVLYGGYEFFTRGKKEE 87
          FV VSLTG GLVLYG Y+FFT+GKKEE
Sbjct: 61 FVIVSLTGWGLVLYGAYDFFTKGKKEE 87

[Close]

BLAST of MC10g0959 vs. NCBI nr
Match: XP_021606673.1 (uncharacterized protein LOC110610908 [Manihot esculenta] >OAY54959.1 hypothetical protein MANES_03G116100v8 [Manihot esculenta])

HSP 1 Score: 128 bits (322), Expect = 2.38e-36
Identity = 59/92 (64.13%), Postives = 72/92 (78.26%), Query Frame = 0


Query: 1  MAVWTAAARRM-----VSSHKSVSTPQIASLTLNRGLAGGGEHHGSPKVNFWEDPLNPTK 60
          MA WTAAAR+      +SS +  S PQ ASL   RGLAGGG+HHG PKVNFW+DP++P+K
Sbjct: 1  MAAWTAAARQAGNITRLSSPRVASAPQAASLIHRRGLAGGGDHHGPPKVNFWQDPMSPSK 60

Query: 61 WKREHFVTVSLTGGGLVLYGGYEFFTRGKKEE 87
          WK EHFV VSLTG GL+ +GGY+FFTRGKK++
Sbjct: 61 WKEEHFVIVSLTGWGLLFFGGYKFFTRGKKDK 92

[Close]

BLAST of MC10g0959 vs. NCBI nr
Match: XP_038685293.1 (uncharacterized protein LOC119985164 isoform X2 [Tripterygium wilfordii])

HSP 1 Score: 127 bits (320), Expect = 4.66e-36
Identity = 63/95 (66.32%), Postives = 73/95 (76.84%), Query Frame = 0


Query: 1  MAVWTAAARRMVS-----SHKSVSTPQIASLTLNRGLAGGGEHHGSPKVNFWEDPLNPTK 60
          MA WT AAR+  +     S K VS+PQ ASL   RGLAGGG+HHG PKVNFWEDP++P+K
Sbjct: 1  MAAWTGAARQAANLSRLYSPKWVSSPQAASLIQWRGLAGGGDHHGPPKVNFWEDPMHPSK 60

Query: 61 WKREHFVTVSLTGGGLVLYGGYEFFTRGK--KEEV 88
          WK EHFV VSLTG GL+ YGGY+FFT+GK  KEEV
Sbjct: 61 WKEEHFVIVSLTGWGLLFYGGYKFFTKGKDKKEEV 95

[Close]

BLAST of MC10g0959 vs. NCBI nr
Match: KAF3962262.1 (hypothetical protein CMV_013205 [Castanea mollissima])

HSP 1 Score: 127 bits (320), Expect = 4.95e-36
Identity = 63/95 (66.32%), Postives = 72/95 (75.79%), Query Frame = 0


Query: 1  MAVWTAAARRMV-----SSHKSVSTPQIASLTLNRGLAGGGEHHGSPKVNFWEDPLNPTK 60
          MA WT AAR+ V     SS K+ ST Q ASL   RGLAGGG+HHG PKVNFW+DPL+P+K
Sbjct: 1  MAAWTGAARQAVNLARLSSPKTASTAQAASLIHRRGLAGGGDHHGPPKVNFWQDPLSPSK 60

Query: 61 WKREHFVTVSLTGGGLVLYGGYEFFTRGK---KEE 87
          WK EHFV VSLTG GL+ YGGY+FFT+GK   KEE
Sbjct: 61 WKEEHFVIVSLTGWGLLFYGGYKFFTKGKNGKKEE 95

[Close]

BLAST of MC10g0959 vs. ExPASy TrEMBL
Match: A0A0A0L362 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G099740 PE=4 SV=1)

HSP 1 Score: 149 bits (376), Expect = 5.46e-45
Identity = 67/87 (77.01%), Postives = 75/87 (86.21%), Query Frame = 0


Query: 1  MAVWTAAARRMVSSHKSVSTPQIASLTLNRGLAGGGEHHGSPKVNFWEDPLNPTKWKREH 60
          MA W AA RR++ SH S+STPQIASLT  RGLAGGG+HHG PKVNFWEDP NP++WKREH
Sbjct: 1  MAAWMAAPRRILLSHNSLSTPQIASLTHRRGLAGGGDHHGPPKVNFWEDPFNPSRWKREH 60

Query: 61 FVTVSLTGGGLVLYGGYEFFTRGKKEE 87
          FV VSLTG GLVLYG Y+FFT+GKKEE
Sbjct: 61 FVIVSLTGWGLVLYGAYDFFTKGKKEE 87

[Close]

BLAST of MC10g0959 vs. ExPASy TrEMBL
Match: A0A5A7U055 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold298G001040 PE=4 SV=1)

HSP 1 Score: 147 bits (370), Expect = 8.54e-44
Identity = 67/87 (77.01%), Postives = 73/87 (83.91%), Query Frame = 0


Query: 1  MAVWTAAARRMVSSHKSVSTPQIASLTLNRGLAGGGEHHGSPKVNFWEDPLNPTKWKREH 60
          MA WTAAARR+V SH SVSTPQ ASL   RGLAGG +HHG PKVNFWEDP NP++WK EH
Sbjct: 1  MAAWTAAARRIVLSHNSVSTPQFASLKHRRGLAGGADHHGPPKVNFWEDPFNPSRWKGEH 60

Query: 61 FVTVSLTGGGLVLYGGYEFFTRGKKEE 87
          FV VSLTG GLVLYG Y+FFT+GKKEE
Sbjct: 61 FVIVSLTGWGLVLYGAYDFFTKGKKEE 87

[Close]

BLAST of MC10g0959 vs. ExPASy TrEMBL
Match: A0A2C9W6M2 (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_03G116100 PE=4 SV=1)

HSP 1 Score: 128 bits (322), Expect = 1.15e-36
Identity = 59/92 (64.13%), Postives = 72/92 (78.26%), Query Frame = 0


Query: 1  MAVWTAAARRM-----VSSHKSVSTPQIASLTLNRGLAGGGEHHGSPKVNFWEDPLNPTK 60
          MA WTAAAR+      +SS +  S PQ ASL   RGLAGGG+HHG PKVNFW+DP++P+K
Sbjct: 1  MAAWTAAARQAGNITRLSSPRVASAPQAASLIHRRGLAGGGDHHGPPKVNFWQDPMSPSK 60

Query: 61 WKREHFVTVSLTGGGLVLYGGYEFFTRGKKEE 87
          WK EHFV VSLTG GL+ +GGY+FFTRGKK++
Sbjct: 61 WKEEHFVIVSLTGWGLLFFGGYKFFTRGKKDK 92

[Close]

BLAST of MC10g0959 vs. ExPASy TrEMBL
Match: A0A7J7C927 (Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW19G00247 PE=4 SV=1)

HSP 1 Score: 127 bits (320), Expect = 2.39e-36
Identity = 63/95 (66.32%), Postives = 73/95 (76.84%), Query Frame = 0


Query: 1  MAVWTAAARRMVS-----SHKSVSTPQIASLTLNRGLAGGGEHHGSPKVNFWEDPLNPTK 60
          MA WT AAR+  +     S K VS+PQ ASL   RGLAGGG+HHG PKVNFWEDP++P+K
Sbjct: 1  MAAWTGAARQAANLSRLYSPKWVSSPQAASLIQWRGLAGGGDHHGPPKVNFWEDPMHPSK 60

Query: 61 WKREHFVTVSLTGGGLVLYGGYEFFTRGK--KEEV 88
          WK EHFV VSLTG GL+ YGGY+FFT+GK  KEEV
Sbjct: 61 WKEEHFVIVSLTGWGLLFYGGYKFFTKGKDKKEEV 95

[Close]

BLAST of MC10g0959 vs. ExPASy TrEMBL
Match: A0A6P4AKA6 (uncharacterized protein LOC107430112 isoform X2 OS=Ziziphus jujuba OX=326968 GN=LOC107430112 PE=4 SV=1)

HSP 1 Score: 127 bits (319), Expect = 3.40e-36
Identity = 61/92 (66.30%), Postives = 71/92 (77.17%), Query Frame = 0


Query: 1  MAVWTAAARRM-----VSSHKSVSTPQIASLTLNRGLAGGGEHHGSPKVNFWEDPLNPTK 60
          MA  T AAR+      +SS KS ST Q ASL   RGLAGGG+HHG PKVNFW+DPLNP+K
Sbjct: 1  MAACTLAARQAANLLRLSSPKSASTAQAASLVHRRGLAGGGDHHGPPKVNFWQDPLNPSK 60

Query: 61 WKREHFVTVSLTGGGLVLYGGYEFFTRGKKEE 87
          WK EHFV VSLTG GL+LYGGY++FT+GKK+ 
Sbjct: 61 WKEEHFVIVSLTGWGLLLYGGYKYFTKGKKDN 92

[Close]

BLAST of MC10g0959 vs. TAIR 10
Match: AT2G20820.1 (unknown protein; Has 44 Blast hits to 44 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 84.3 bits (207), Expect = 5.4e-17
Identity = 36/63 (57.14%), Postives = 44/63 (69.84%), Query Frame = 0


Query: 24 ASLTLNRGLAGGGEHHGSPKVNFWEDPLNPTKWKREHFVTVSLTGGGLVLYGGYEFFTRG 83
          AS+   R LAG  +HHGS KV+FW+ P NP  WK EHFV +SL+G GL+ Y GY+  T G
Sbjct: 24 ASIGQRRCLAGAADHHGSTKVDFWKQPTNPGNWKEEHFVLISLSGWGLLFYSGYKLATGG 83

Query: 84 KKE 87
          KKE
Sbjct: 84 KKE 86

[Close]

BLAST of MC10g0959 vs. TAIR 10
Match: AT2G20820.2 (unknown protein; Has 36 Blast hits to 36 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 54.3 bits (129), Expect = 5.9e-08
Identity = 21/39 (53.85%), Postives = 27/39 (69.23%), Query Frame = 0


Query: 24 ASLTLNRGLAGGGEHHGSPKVNFWEDPLNPTKWKREHFV 63
          AS+   R LAG  +HHGS KV+FW+ P NP  WK EH++
Sbjct: 24 ASIGQRRCLAGAADHHGSTKVDFWKQPTNPGNWKEEHWI 62

The following BLAST results are available for this feature:

BLAST of MC10g0959 vs.


Match Name	E-value	Identity	Description

BLAST of MC10g0959 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8650170.1	1.85e-47	77.78	hypothetical protein Csa_010956 [Cucumis sativus]	[more]
KAA0046869.1	1.76e-43	77.01	hypothetical protein E6C27_scaffold230G00240 [Cucumis melo var. makuwa] >TYK0327...	[more]
XP_021606673.1	2.38e-36	64.13	uncharacterized protein LOC110610908 [Manihot esculenta] >OAY54959.1 hypothetica...	[more]
XP_038685293.1	4.66e-36	66.32	uncharacterized protein LOC119985164 isoform X2 [Tripterygium wilfordii]	[more]
KAF3962262.1	4.95e-36	66.32	hypothetical protein CMV_013205 [Castanea mollissima]	[more]

BLAST of MC10g0959 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L362	5.46e-45	77.01	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G099740 PE=4 SV=1	[more]
A0A5A7U055	8.54e-44	77.01	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A2C9W6M2	1.15e-36	64.13	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_03G116100 PE=4 SV=...	[more]
A0A7J7C927	2.39e-36	66.32	Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW19G00247 ...	[more]
A0A6P4AKA6	3.40e-36	66.30	uncharacterized protein LOC107430112 isoform X2 OS=Ziziphus jujuba OX=326968 GN=...	[more]

BLAST of MC10g0959 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G20820.1	5.4e-17	57.14	unknown protein; Has 44 Blast hits to 44 proteins in 13 species: Archae - 0; Bac...	[more]
AT2G20820.2	5.9e-08	53.85	unknown protein; Has 36 Blast hits to 36 proteins in 10 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35292	EXPRESSED PROTEIN	coord: 1..86
None	No IPR available	PANTHER	PTHR35292:SF6	SUBFAMILY NOT NAMED	coord: 1..86

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC10g0959.1	MC10g0959.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane