MC10g0944 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC10g0944
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	vacuolar ATP synthase catalytic subunit-related / V-ATPase-related / vacuolar proton pump-related
Location	MC10: 8147521 .. 8147682 (+)
RNA-Seq Expression	MC10g0944
Synteny	MC10g0944

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCCACGTATCAGATATTAAACTGATAAGAACAGATACTACACTTGATCTTAGCCAAAAGGCCGAGAAAGGTATGCTTAATATGGTCTTCCTTGGCTCCTTTTATAGCTTTCTTTTGGACTGCTGCTTCTGGTTCCAACCGATGTGGGACAACCAATTG

mRNA sequence

ATGGCCCACGTATCAGATATTAAACTGATAAGAACAGATACTACACTTGATCTTAGCCAAAAGGCCGAGAAAGGTATGCTTAATATGGTCTTCCTTGGCTCCTTTTATAGCTTTCTTTTGGACTGCTGCTTCTGGTTCCAACCGATGTGGGACAACCAATTG

Coding sequence (CDS)

ATGGCCCACGTATCAGATATTAAACTGATAAGAACAGATACTACACTTGATCTTAGCCAAAAGGCCGAGAAAGGTATGCTTAATATGGTCTTCCTTGGCTCCTTTTATAGCTTTCTTTTGGACTGCTGCTTCTGGTTCCAACCGATGTGGGACAACCAATTG

Protein sequence

MAHVSDIKLIRTDTTLDLSQKAEKGMLNMVFLGSFYSFLLDCCFWFQPMWDNQL

Homology

[Close]

BLAST of MC10g0944 vs. ExPASy Swiss-Prot
Match: F4J3H7 (Serine/threonine-protein kinase ZRK7 OS=Arabidopsis thaliana OX=3702 GN=ZRK7 PE=2 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 6.5e-07
Identity = 25/27 (92.59%), Postives = 27/27 (100.00%), Query Frame = 0


Query: 1  MAHVSDIKLIRTDTTLDLSQKAEKGML 28
          MAH+SDIKLIRTDTTLDLSQKAEKGM+
Sbjct: 1  MAHISDIKLIRTDTTLDLSQKAEKGMI 27

[Close]

BLAST of MC10g0944 vs. NCBI nr
Match: KAG8651632.1 (hypothetical protein MANES_06G007001v8 [Manihot esculenta])

HSP 1 Score: 71.2 bits (173), Expect = 1.41e-14
Identity = 36/53 (67.92%), Postives = 39/53 (73.58%), Query Frame = 0


Query: 1  MAHVSDIKLIRTDTTLDLSQKAEKGMLNMVFLGSFYSFLLDCCFWFQPMWDNQ 53
          MAHVSDIKLIRTDTTLDLSQKAEKGML+ +   SFYS      F F+ MWD  
Sbjct: 1  MAHVSDIKLIRTDTTLDLSQKAEKGMLDSMASASFYSHSFQGPFRFKAMWDKN 53

[Close]

BLAST of MC10g0944 vs. NCBI nr
Match: KAG8643542.1 (hypothetical protein MANES_11G047250v8, partial [Manihot esculenta])

HSP 1 Score: 66.6 bits (161), Expect = 7.77e-13
Identity = 35/51 (68.63%), Postives = 38/51 (74.51%), Query Frame = 0


Query: 1  MAHVSDIKLIRTDTTLDLSQKAEKGMLNMVFLGSFYSFLLDCCFWFQPMWD 51
          MAHVSDIKLIRTDTTLDLSQKAEKGMLN     SFY+        ++PMWD
Sbjct: 20 MAHVSDIKLIRTDTTLDLSQKAEKGMLNKKSHASFYAPTHANLSSYKPMWD 70

[Close]

BLAST of MC10g0944 vs. NCBI nr
Match: KJB06671.1 (hypothetical protein B456_001G025400, partial [Gossypium raimondii])

HSP 1 Score: 66.6 bits (161), Expect = 1.11e-12
Identity = 36/53 (67.92%), Postives = 36/53 (67.92%), Query Frame = 0


Query: 1  MAHVSDIKLIRTDTTLDLSQKAEKGMLNMVFLGSFYSFLLDCCFWFQPMWDNQ 53
          MAHVSDIKLIRTDTTLDLSQKAEKGML  V    FY  LL        MWD Q
Sbjct: 20 MAHVSDIKLIRTDTTLDLSQKAEKGMLCFVEARFFYRLLLPSSVCIPMMWDIQ 72

[Close]

BLAST of MC10g0944 vs. NCBI nr
Match: CAA7389773.1 (unnamed protein product [Spirodela intermedia])

HSP 1 Score: 64.7 bits (156), Expect = 2.71e-12
Identity = 34/51 (66.67%), Postives = 37/51 (72.55%), Query Frame = 0


Query: 1  MAHVSDIKLIRTDTTLDLSQKAEKGMLNMVFLGSFYSFLLDCCFWFQPMWD 51
          MAHVSDIKLIRTDTTLDLSQKAEKGM +     + Y   L C +  QPMWD
Sbjct: 1  MAHVSDIKLIRTDTTLDLSQKAEKGMSSSEAWRALYRHFLSC-YHKQPMWD 50

[Close]

BLAST of MC10g0944 vs. NCBI nr
Match: CBI33939.3 (unnamed protein product, partial [Vitis vinifera])

HSP 1 Score: 65.9 bits (159), Expect = 3.17e-12
Identity = 35/53 (66.04%), Postives = 36/53 (67.92%), Query Frame = 0


Query: 1  MAHVSDIKLIRTDTTLDLSQKAEKGMLNMVFLGSFYSFLLDCCFWFQPMWDNQ 53
          M+HVSDIKLIRTDTTLDLSQKAEKGML  V   SFY   L        MWD Q
Sbjct: 43 MSHVSDIKLIRTDTTLDLSQKAEKGMLRSVSSSSFYIMWLATSSHIVAMWDCQ 95

[Close]

BLAST of MC10g0944 vs. ExPASy TrEMBL
Match: A0A0D2PRR5 (Uncharacterized protein (Fragment) OS=Gossypium raimondii OX=29730 GN=B456_001G025400 PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 5.36e-13
Identity = 36/53 (67.92%), Postives = 36/53 (67.92%), Query Frame = 0


Query: 1  MAHVSDIKLIRTDTTLDLSQKAEKGMLNMVFLGSFYSFLLDCCFWFQPMWDNQ 53
          MAHVSDIKLIRTDTTLDLSQKAEKGML  V    FY  LL        MWD Q
Sbjct: 20 MAHVSDIKLIRTDTTLDLSQKAEKGMLCFVEARFFYRLLLPSSVCIPMMWDIQ 72

[Close]

BLAST of MC10g0944 vs. ExPASy TrEMBL
Match: A0A7I8K083 (Hypothetical protein OS=Spirodela intermedia OX=51605 GN=SI8410_01001757 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.31e-12
Identity = 34/51 (66.67%), Postives = 37/51 (72.55%), Query Frame = 0


Query: 1  MAHVSDIKLIRTDTTLDLSQKAEKGMLNMVFLGSFYSFLLDCCFWFQPMWD 51
          MAHVSDIKLIRTDTTLDLSQKAEKGM +     + Y   L C +  QPMWD
Sbjct: 1  MAHVSDIKLIRTDTTLDLSQKAEKGMSSSEAWRALYRHFLSC-YHKQPMWD 50

[Close]

BLAST of MC10g0944 vs. ExPASy TrEMBL
Match: D7TTF9 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_02s0012g00670 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 1.53e-12
Identity = 35/53 (66.04%), Postives = 36/53 (67.92%), Query Frame = 0


Query: 1  MAHVSDIKLIRTDTTLDLSQKAEKGMLNMVFLGSFYSFLLDCCFWFQPMWDNQ 53
          M+HVSDIKLIRTDTTLDLSQKAEKGML  V   SFY   L        MWD Q
Sbjct: 43 MSHVSDIKLIRTDTTLDLSQKAEKGMLRSVSSSSFYIMWLATSSHIVAMWDCQ 95

[Close]

BLAST of MC10g0944 vs. ExPASy TrEMBL
Match: A0A5D2HVX4 (Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_D13G128000v1 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.92e-12
Identity = 34/44 (77.27%), Postives = 35/44 (79.55%), Query Frame = 0


Query: 1  MAHVSDIKLIRTDTTLDLSQKAEKGMLNMVFLGSFYSFLLDCCF 44
          MAHVSDIKLIRTDTTLDLSQKAEKGML +V  G FYS     CF
Sbjct: 16 MAHVSDIKLIRTDTTLDLSQKAEKGMLCVVQAGFFYSCCSPRCF 59

[Close]

BLAST of MC10g0944 vs. ExPASy TrEMBL
Match: A0A0D2NF40 (Uncharacterized protein (Fragment) OS=Gossypium raimondii OX=29730 GN=B456_005G187200 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 1.96e-12
Identity = 35/53 (66.04%), Postives = 36/53 (67.92%), Query Frame = 0


Query: 1  MAHVSDIKLIRTDTTLDLSQKAEKGMLNMVFLGSFYSFLLDCCFWFQPMWDNQ 53
          MAHVSDIKLIRTDTTLDLSQKAEKGML  V    FY  LL    +   MWD  
Sbjct: 20 MAHVSDIKLIRTDTTLDLSQKAEKGMLAAVQTRLFYKQLLASSRYISMMWDKD 72

[Close]

BLAST of MC10g0944 vs. TAIR 10
Match: AT3G57770.1 (Protein kinase superfamily protein )

HSP 1 Score: 53.9 bits (128), Expect = 4.6e-08
Identity = 25/27 (92.59%), Postives = 27/27 (100.00%), Query Frame = 0


Query: 1  MAHVSDIKLIRTDTTLDLSQKAEKGML 28
          MAH+SDIKLIRTDTTLDLSQKAEKGM+
Sbjct: 1  MAHISDIKLIRTDTTLDLSQKAEKGMI 27

[Close]

BLAST of MC10g0944 vs. TAIR 10
Match: AT1G16820.1 (vacuolar ATP synthase catalytic subunit-related / V-ATPase-related / vacuolar proton pump-related )

HSP 1 Score: 53.5 bits (127), Expect = 6.0e-08
Identity = 25/26 (96.15%), Postives = 26/26 (100.00%), Query Frame = 0


Query: 1  MAHVSDIKLIRTDTTLDLSQKAEKGM 27
          MAH+SDIKLIRTDTTLDLSQKAEKGM
Sbjct: 1  MAHISDIKLIRTDTTLDLSQKAEKGM 26

The following BLAST results are available for this feature:

BLAST of MC10g0944 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4J3H7	6.5e-07	92.59	Serine/threonine-protein kinase ZRK7 OS=Arabidopsis thaliana OX=3702 GN=ZRK7 PE=...	[more]

BLAST of MC10g0944 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG8651632.1	1.41e-14	67.92	hypothetical protein MANES_06G007001v8 [Manihot esculenta]	[more]
KAG8643542.1	7.77e-13	68.63	hypothetical protein MANES_11G047250v8, partial [Manihot esculenta]	[more]
KJB06671.1	1.11e-12	67.92	hypothetical protein B456_001G025400, partial [Gossypium raimondii]	[more]
CAA7389773.1	2.71e-12	66.67	unnamed protein product [Spirodela intermedia]	[more]
CBI33939.3	3.17e-12	66.04	unnamed protein product, partial [Vitis vinifera]	[more]

BLAST of MC10g0944 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0D2PRR5	5.36e-13	67.92	Uncharacterized protein (Fragment) OS=Gossypium raimondii OX=29730 GN=B456_001G0...	[more]
A0A7I8K083	1.31e-12	66.67	Hypothetical protein OS=Spirodela intermedia OX=51605 GN=SI8410_01001757 PE=4 SV...	[more]
D7TTF9	1.53e-12	66.04	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_02s0012g00670 PE=4 SV=...	[more]
A0A5D2HVX4	1.92e-12	77.27	Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_D13G128000v1 P...	[more]
A0A0D2NF40	1.96e-12	66.04	Uncharacterized protein (Fragment) OS=Gossypium raimondii OX=29730 GN=B456_005G1...	[more]

BLAST of MC10g0944 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G57770.1	4.6e-08	92.59	Protein kinase superfamily protein	[more]
AT1G16820.1	6.0e-08	96.15	vacuolar ATP synthase catalytic subunit-related / V-ATPase-related / vacuolar pr...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34892:SF1	VACUOLAR ATP SYNTHASE CATALYTIC SUBUNIT-RELATED / V-ATPASE-RELATED / VACUOLAR PROTON PUMP-RELATED	coord: 1..53
None	No IPR available	PANTHER	PTHR34892	VACUOLAR ATP SYNTHASE CATALYTIC SUBUNIT-RELATED / V-ATPASE-RELATED / VACUOLAR PROTON PUMP-LIKE PROTEIN	coord: 1..53

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC10g0944.1	MC10g0944.1	mRNA