MC10g0934 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC10g0934
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	RING-type domain-containing protein
Location	MC10: 8098705 .. 8099238 (+)
RNA-Seq Expression	MC10g0934
Synteny	MC10g0934

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTCCTCAGGTTCTTGCTGTTCCACAATCCAACCCTCCTCCTTCCCTCCTCCCCTTCCTCACCGCGTTCTCGATCATCATCCTCATCTTCATCTCCATCGTCATCTTCTCCGTGCTCGCCTCGTTCGCCATCATCATCCTCATCTACATCATCTGTCAATACCTGGTCGGTCCGACGAGCTTCACCGACCTCGAAGCAGGCGAGGAAGAGGACAACCGAGATGAGATTCTGATATCTCGTCAAGCTCGGCACGGTGGAGATGTGTGGAGGGAGGTCTTGGAGAGGAAGAGGGAGGTTTTGGAGAGAAAAGTTATGGCGGCTCCTGTGAGGTATGGGAGCCCCGAAATGGAAATGGAAATGGCAGCCAATTATTGCATTGATTGTGCAATTTGTTTGGAGGATTTTGAAAGTGGAGAGCTTTGCCAGATTTTTCCTGTGTGTAATCACATTTTTCATTATTCTTGCATTCATCATTGGTTGAAGAGGAACACGACTTGCCCCATTTGTCGATGTTCCATTTTGAAAGACGAG

mRNA sequence

ATGATTCCTCAGGTTCTTGCTGTTCCACAATCCAACCCTCCTCCTTCCCTCCTCCCCTTCCTCACCGCGTTCTCGATCATCATCCTCATCTTCATCTCCATCGTCATCTTCTCCGTGCTCGCCTCGTTCGCCATCATCATCCTCATCTACATCATCTGTCAATACCTGGTCGGTCCGACGAGCTTCACCGACCTCGAAGCAGGCGAGGAAGAGGACAACCGAGATGAGATTCTGATATCTCGTCAAGCTCGGCACGGTGGAGATGTGTGGAGGGAGGTCTTGGAGAGGAAGAGGGAGGTTTTGGAGAGAAAAGTTATGGCGGCTCCTGTGAGGTATGGGAGCCCCGAAATGGAAATGGAAATGGCAGCCAATTATTGCATTGATTGTGCAATTTGTTTGGAGGATTTTGAAAGTGGAGAGCTTTGCCAGATTTTTCCTGTGTGTAATCACATTTTTCATTATTCTTGCATTCATCATTGGTTGAAGAGGAACACGACTTGCCCCATTTGTCGATGTTCCATTTTGAAAGACGAG

Coding sequence (CDS)

ATGATTCCTCAGGTTCTTGCTGTTCCACAATCCAACCCTCCTCCTTCCCTCCTCCCCTTCCTCACCGCGTTCTCGATCATCATCCTCATCTTCATCTCCATCGTCATCTTCTCCGTGCTCGCCTCGTTCGCCATCATCATCCTCATCTACATCATCTGTCAATACCTGGTCGGTCCGACGAGCTTCACCGACCTCGAAGCAGGCGAGGAAGAGGACAACCGAGATGAGATTCTGATATCTCGTCAAGCTCGGCACGGTGGAGATGTGTGGAGGGAGGTCTTGGAGAGGAAGAGGGAGGTTTTGGAGAGAAAAGTTATGGCGGCTCCTGTGAGGTATGGGAGCCCCGAAATGGAAATGGAAATGGCAGCCAATTATTGCATTGATTGTGCAATTTGTTTGGAGGATTTTGAAAGTGGAGAGCTTTGCCAGATTTTTCCTGTGTGTAATCACATTTTTCATTATTCTTGCATTCATCATTGGTTGAAGAGGAACACGACTTGCCCCATTTGTCGATGTTCCATTTTGAAAGACGAG

Protein sequence

MIPQVLAVPQSNPPPSLLPFLTAFSIIILIFISIVIFSVLASFAIIILIYIICQYLVGPTSFTDLEAGEEEDNRDEILISRQARHGGDVWREVLERKREVLERKVMAAPVRYGSPEMEMEMAANYCIDCAICLEDFESGELCQIFPVCNHIFHYSCIHHWLKRNTTCPICRCSILKDE

Homology

[Close]

BLAST of MC10g0934 vs. ExPASy Swiss-Prot
Match: Q67YI6 (RING-H2 finger protein ATL65 OS=Arabidopsis thaliana OX=3702 GN=ATL65 PE=2 SV=2)

HSP 1 Score: 69.7 bits (169), Expect = 3.8e-11
Identity = 29/63 (46.03%), Postives = 39/63 (61.90%), Query Frame = 0


Query: 113 GSPEMEMEMAANYCIDCAICLEDFESGELCQIFPVCNHIFHYSCIHHWLKRNTTCPICRC 172
           G P +    AAN C DCA+CL +FE G+  +  P+C H FH  CI  WL+ +  CP+CR 
Sbjct: 141 GKPAVGKTSAAN-CRDCAVCLLEFEEGDYVRTLPLCFHAFHLECIDEWLRSHPNCPLCRT 200

Query: 173 SIL 176
           +IL
Sbjct: 201 AIL 202

[Close]

BLAST of MC10g0934 vs. ExPASy Swiss-Prot
Match: Q9C919 (Putative RING-H2 finger protein ATL19 OS=Arabidopsis thaliana OX=3702 GN=ATL19 PE=3 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 7.1e-10
Identity = 53/172 (30.81%), Postives = 86/172 (50.00%), Query Frame = 0


Query: 11  SNPPPSLLPFLTAFSIIILIFISIVIFSVLASFAIIILIYIICQYLVGPTSFT----DLE 70
           S+     +  ++   + + I + I++  ++A+ A+I++IY+I   ++ P   T    DLE
Sbjct: 2   SSEEDDAISLISVLGLAVFIGLCILLVVLIATSALILVIYVIIDCILRPFLGTCLDLDLE 61

Query: 71  AG-EEEDNRDEILISRQARHGG----DVWREVLER--KREVLERKVMAAPVRYGSPEMEM 130
            G +    R  I+        G    D  RE  +R  K+ V+E  +    V  G+ E + 
Sbjct: 62  IGVQRGQQRARIVTYHTIISTGLRLPDFEREGKKRGLKQSVIETLLPKLLVGQGNHEEDE 121

Query: 131 EMAANYCIDCAICLEDFESGELCQIFPVCNHIFHYSCIHHWLKRNTTCPICR 172
           E +     +CAICL  +   E C++FPVC HI+H  CI  WLK + TCP CR
Sbjct: 122 EKSLE-SRECAICLSGYVVNEECRVFPVCRHIYHALCIDAWLKNHLTCPTCR 172

[Close]

BLAST of MC10g0934 vs. ExPASy Swiss-Prot
Match: Q7XLY8 (E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0590900 PE=2 SV=2)

HSP 1 Score: 62.8 bits (151), Expect = 4.6e-09
Identity = 22/47 (46.81%), Postives = 32/47 (68.09%), Query Frame = 0


Query: 128 DCAICLEDFESGELCQIFPVCNHIFHYSCIHHWLKRNTTCPICRCSI 175
           DC++CL +F  GE  ++ P C+H FH  CI  WLK ++ CP+CR +I
Sbjct: 156 DCSVCLGEFSDGESLRLLPRCSHAFHQQCIDTWLKSHSNCPLCRANI 202

[Close]

BLAST of MC10g0934 vs. ExPASy Swiss-Prot
Match: Q9C7I1 (RING-H2 finger protein ATL34 OS=Arabidopsis thaliana OX=3702 GN=ATL34 PE=2 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 7.9e-09
Identity = 48/172 (27.91%), Postives = 78/172 (45.35%), Query Frame = 0


Query: 3   PQVLAVPQSNPPPSLLPFLTAFSIIILIFISIVIFSVLASFAIIILIYIICQYLVGPTSF 62
           P+  A P     P+ +P     ++II + +  ++FS+LA          +C Y    TS 
Sbjct: 30  PRTTAPPYIAQRPNQVP-----AVIIAMLMFTLLFSMLAC--------CVC-YKYTNTSP 89

Query: 63  TDLEAGEEEDNRDEILISRQARHGGDVWREVLERKREVLERKVMAAPVRYGSPEMEMEMA 122
               +  EE    E+  +R+   G  + ++V+      L  +V    +  G         
Sbjct: 90  HGTSSDTEEGGHGEVAFTRRTSRG--LGKDVINSFPSFLYSQVKGLKIGKGG-------- 149

Query: 123 ANYCIDCAICLEDFESGELCQIFPVCNHIFHYSCIHHWLKRNTTCPICRCSI 175
               ++CAICL +FE  E  ++ P C+H FH SCI  WL   +TCP+CR S+
Sbjct: 150 ----VECAICLNEFEDEETLRLMPPCSHAFHASCIDVWLSSRSTCPVCRASL 173

[Close]

BLAST of MC10g0934 vs. ExPASy Swiss-Prot
Match: Q5XF85 (E3 ubiquitin-protein ligase ATL42 OS=Arabidopsis thaliana OX=3702 GN=ATL42 PE=1 SV=2)

HSP 1 Score: 57.8 bits (138), Expect = 1.5e-07
Identity = 36/144 (25.00%), Postives = 70/144 (48.61%), Query Frame = 0


Query: 36  IFSVLASFAIIILIYIICQYLVGPTSFTDLEAGEEEDNRDEILISRQARHGGDVWREVLE 95
           + +++ +   ++L+Y  C ++       DL +G  +  R +    R+ R G    R    
Sbjct: 43  VLAIMFALTFVLLVYAKCCHI-------DLRSGSGDRRRHD----RRLRQGIFFNRSTAS 102

Query: 96  RKR-EVLERKVMAAPVRYGSPEMEMEMAANYCIDCAICLEDFESGELCQIFPVCNHIFHY 155
             R   L++  + +   +    ++    +   +DC++CL  FES E+ ++ P C H FH 
Sbjct: 103 SDRFSGLDKTAIESLPLFRFSALK---GSKQGLDCSVCLSKFESVEILRLLPKCRHAFHI 162

Query: 156 SCIHHWLKRNTTCPICRCSILKDE 179
            CI  WL+++ TCP+CR  +  +E
Sbjct: 163 GCIDQWLEQHATCPLCRDRVSMEE 172

[Close]

BLAST of MC10g0934 vs. NCBI nr
Match: KAA0060638.1 (putative RING-H2 finger protein ATL19 [Cucumis melo var. makuwa])

HSP 1 Score: 216 bits (551), Expect = 1.72e-68
Identity = 123/197 (62.44%), Postives = 145/197 (73.60%), Query Frame = 0


Query: 1   MIPQVLAVPQSNPPPSLLPFLTAFSIIILIFISIVIFSVLASFAIIILIYIICQYLVGPT 60
           MIPQ L VPQSNPPPS+LPFLTAFSI+I+IFISI+IFSV+ASFAIII IYIIC+YL+G T
Sbjct: 1   MIPQALTVPQSNPPPSILPFLTAFSIVIVIFISIIIFSVVASFAIIIFIYIICKYLIGST 60

Query: 61  SF----TDLEAGEEEDN-----RDEILISRQ--ARHGGDV--------WREVLERKREVL 120
           S     +DLEAGE  +N     R  IL++    + HG D+        WRE +ER   ++
Sbjct: 61  SLDEHVSDLEAGETNENQRMIARSRILLTHHQTSSHGRDIMERSESNTWREGMERT--IM 120

Query: 121 ERKVMAAPVRYGSPEMEMEMAANYCIDCAICLEDFESGELCQIFPVCNHIFHYSCIHHWL 178
             KV AAPV YGS E+  +     CIDCAICLEDFE+GELCQ FPVCNHIFHYSCI HWL
Sbjct: 121 IEKV-AAPVSYGSSEVVAK-----CIDCAICLEDFENGELCQNFPVCNHIFHYSCIQHWL 180

[Close]

BLAST of MC10g0934 vs. NCBI nr
Match: KAG6577373.1 (putative RING-H2 finger protein ATL19, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 194 bits (494), Expect = 5.70e-60
Identity = 111/181 (61.33%), Postives = 124/181 (68.51%), Query Frame = 0


Query: 9   PQSNPPPSLLPFLTAFSIIILIFISIVIFSVLASFAIIILIYIICQYLVGPTSFTD---- 68
           P  NPPPS+LPFLT+FSIIILIF+SI+IFSVLASFAII+L+Y IC+YLV PT   +    
Sbjct: 4   PPLNPPPSILPFLTSFSIIILIFVSIIIFSVLASFAIIVLVYFICKYLVHPTYLDEHDPV 63

Query: 69  LEAGEEEDN-----RDEILISRQARHGGDV----WREVLERK--REVLERKVMAAPVRYG 128
           L A E   N     R  IL+S   RHGGDV    WRE LERK  RE   +K     V YG
Sbjct: 64  LVADERNQNQSQSTRTRILVSHPTRHGGDVENASWREGLERKGLREQALKKTTTVLVSYG 123

Query: 129 SPEMEMEMAANYCIDCAICLEDFESGELCQIFPVCNHIFHYSCIHHWLKRNTTCPICRCS 174
           S E   +      +DCAICLEDFE GELCQIFPVCNHIFHY CI  WLK+N TCPICRCS
Sbjct: 124 SSEATAKF-----VDCAICLEDFEKGELCQIFPVCNHIFHYCCIQRWLKKNMTCPICRCS 179

[Close]

BLAST of MC10g0934 vs. NCBI nr
Match: KAG7027690.1 (putative RING-H2 finger protein ATL19, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 189 bits (480), Expect = 3.76e-57
Identity = 109/185 (58.92%), Postives = 123/185 (66.49%), Query Frame = 0


Query: 9   PQSNPPPSLLPFLTAFSIIILIFISIVIFSVLASFAIIILIYIICQYLVGPTSFTD---- 68
           P  NPPPS+LPFLT+FSIIILIF+SI+IFSVLASFAII+L+Y IC+YLV PT   +    
Sbjct: 4   PPLNPPPSILPFLTSFSIIILIFVSIIIFSVLASFAIIVLVYFICRYLVHPTYLDEHDPI 63

Query: 69  LEAGEEEDN-----RDEILISRQARHGGDV----WREVLERK--REVLERKVMAAPVRYG 128
           L A E   N     R  IL+S   RHGGDV    WRE LERK  RE    K     V YG
Sbjct: 64  LVADERNQNQSQSTRTRILVSHPTRHGGDVENASWREGLERKGLREQALEKTTTVLVSYG 123

Query: 129 SPEMEMEMAANYCIDCAICLEDFESGELCQIFPVCNHIFHYSCIHHWLKRNTTCPICRCS 178
           S E   +      +DCAICLEDFE GELCQIFPVCNHIFHY CI  WLK+N TCPIC  S
Sbjct: 124 SSEATAKF-----VDCAICLEDFEKGELCQIFPVCNHIFHYCCIQRWLKKNMTCPICHDS 183

[Close]

BLAST of MC10g0934 vs. NCBI nr
Match: KAG6600727.1 (putative RING-H2 finger protein ATL19, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 184 bits (467), Expect = 9.23e-56
Identity = 109/189 (57.67%), Postives = 132/189 (69.84%), Query Frame = 0


Query: 1   MIPQVLA-VPQSNPPPSLLPFLTAFSIIILIFISIVIFSVLASFAIIILIYIICQYLVGP 60
           MIPQ L  VPQSNPPPS LPFLTAFSI+I+I ISIVIFS+LASF+III I+++CQYL+G 
Sbjct: 1   MIPQALTTVPQSNPPPSTLPFLTAFSIVIVIIISIVIFSILASFSIIIFIFVLCQYLIGS 60

Query: 61  TSFT----DLEAGEEEDNRDEILISRQ--ARHGGDVWREVLERKREVLERK--------V 120
           T+      D+EAGE   N+++ +  R   +R+  ++WRE LER   + ERK         
Sbjct: 61  TNLDGHHLDVEAGERNQNQNQTMRGRSLVSRYESNIWREALERT--MAERKGRRAQIVMK 120

Query: 121 MAAPVRYGSPEMEMEMAANYCIDCAICLEDFESGELCQIFPVCNHIFHYSCIHHWLKRNT 174
           MA  VRYG  E+    AA Y  DCAICLE+FE+GE CQIF VC HIFHYSCI  WL+RN 
Sbjct: 121 MATRVRYGCSEV----AAKY-TDCAICLEEFENGEDCQIFVVCKHIFHYSCIQRWLRRNM 180

[Close]

BLAST of MC10g0934 vs. NCBI nr
Match: TYK02232.1 (putative RING-H2 finger protein ATL19 [Cucumis melo var. makuwa])

HSP 1 Score: 154 bits (390), Expect = 2.70e-43
Identity = 102/182 (56.04%), Postives = 121/182 (66.48%), Query Frame = 0


Query: 1   MIPQVLAVPQSNPPPSLLPFLTAFSIIILIFISIVIFSVLASFAIIILIYIICQYLVGPT 60
           MIPQ L VPQSNPPPS+LPFLTAFSI+I+IFISI+IFSV+ASFAIII IYIIC+YL+G T
Sbjct: 1   MIPQALTVPQSNPPPSILPFLTAFSIVIVIFISIIIFSVVASFAIIIFIYIICKYLIGST 60

Query: 61  SF----TDLEAGEEEDN-----RDEILISRQ--ARHGGDV--------WREVLERKREVL 120
           S     +DLEAGE  +N     R  IL++    + HG D+        WRE +ER   ++
Sbjct: 61  SLDEHVSDLEAGETNENQRMIARSRILLTHHQTSSHGRDIMERSESNTWREGMERT--IM 120

Query: 121 ERKVMAAPVRYGSPEMEMEMAANYCIDCAICLEDFESGELCQIFPVCNHIFHYSCIHHWL 163
             KV AAPV YGS E+  +     CIDCAICLEDFE+GELCQ FPV            WL
Sbjct: 121 IEKV-AAPVSYGSSEVVAK-----CIDCAICLEDFENGELCQNFPV------------WL 162

[Close]

BLAST of MC10g0934 vs. ExPASy TrEMBL
Match: A0A5A7UZF7 (Putative RING-H2 finger protein ATL19 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G005240 PE=4 SV=1)

HSP 1 Score: 216 bits (551), Expect = 8.34e-69
Identity = 123/197 (62.44%), Postives = 145/197 (73.60%), Query Frame = 0


Query: 1   MIPQVLAVPQSNPPPSLLPFLTAFSIIILIFISIVIFSVLASFAIIILIYIICQYLVGPT 60
           MIPQ L VPQSNPPPS+LPFLTAFSI+I+IFISI+IFSV+ASFAIII IYIIC+YL+G T
Sbjct: 1   MIPQALTVPQSNPPPSILPFLTAFSIVIVIFISIIIFSVVASFAIIIFIYIICKYLIGST 60

Query: 61  SF----TDLEAGEEEDN-----RDEILISRQ--ARHGGDV--------WREVLERKREVL 120
           S     +DLEAGE  +N     R  IL++    + HG D+        WRE +ER   ++
Sbjct: 61  SLDEHVSDLEAGETNENQRMIARSRILLTHHQTSSHGRDIMERSESNTWREGMERT--IM 120

Query: 121 ERKVMAAPVRYGSPEMEMEMAANYCIDCAICLEDFESGELCQIFPVCNHIFHYSCIHHWL 178
             KV AAPV YGS E+  +     CIDCAICLEDFE+GELCQ FPVCNHIFHYSCI HWL
Sbjct: 121 IEKV-AAPVSYGSSEVVAK-----CIDCAICLEDFENGELCQNFPVCNHIFHYSCIQHWL 180

[Close]

BLAST of MC10g0934 vs. ExPASy TrEMBL
Match: A0A0A0L6M6 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G104950 PE=4 SV=1)

HSP 1 Score: 214 bits (546), Expect = 4.49e-68
Identity = 121/196 (61.73%), Postives = 144/196 (73.47%), Query Frame = 0


Query: 1   MIPQVLAVPQSNPPPSLLPFLTAFSIIILIFISIVIFSVLASFAIIILIYIICQYLVGPT 60
           MIPQ L VPQSNPPPS+LPFLTAFSI+I+IFI+I+IFSV+ASFAII+ IY+IC+YL+G T
Sbjct: 1   MIPQALTVPQSNPPPSILPFLTAFSIVIVIFITIIIFSVVASFAIIVCIYVICKYLIGST 60

Query: 61  SF----TDLEAGEEEDN-----RDEILISRQ--ARHGGDV--------WREVLERKREVL 120
           S     ++LEAGE  +N     R  IL++    + HG D+        WRE +ER   ++
Sbjct: 61  SLDGHSSNLEAGEPNENQMMITRSRILLTHHQTSSHGRDIMERSESNAWREDMERT--IM 120

Query: 121 ERKVMAAPVRYGSPEMEMEMAANYCIDCAICLEDFESGELCQIFPVCNHIFHYSCIHHWL 177
             KV AAPV YGS E     AA  CIDCAICLEDFE+GELCQ FPVCNHIFHYSCI HWL
Sbjct: 121 IEKV-AAPVSYGSSE-----AATKCIDCAICLEDFENGELCQNFPVCNHIFHYSCIQHWL 180

[Close]

BLAST of MC10g0934 vs. ExPASy TrEMBL
Match: A0A5D3BTV2 (Putative RING-H2 finger protein ATL19 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold18G00260 PE=4 SV=1)

HSP 1 Score: 154 bits (390), Expect = 1.31e-43
Identity = 102/182 (56.04%), Postives = 121/182 (66.48%), Query Frame = 0


Query: 1   MIPQVLAVPQSNPPPSLLPFLTAFSIIILIFISIVIFSVLASFAIIILIYIICQYLVGPT 60
           MIPQ L VPQSNPPPS+LPFLTAFSI+I+IFISI+IFSV+ASFAIII IYIIC+YL+G T
Sbjct: 1   MIPQALTVPQSNPPPSILPFLTAFSIVIVIFISIIIFSVVASFAIIIFIYIICKYLIGST 60

Query: 61  SF----TDLEAGEEEDN-----RDEILISRQ--ARHGGDV--------WREVLERKREVL 120
           S     +DLEAGE  +N     R  IL++    + HG D+        WRE +ER   ++
Sbjct: 61  SLDEHVSDLEAGETNENQRMIARSRILLTHHQTSSHGRDIMERSESNTWREGMERT--IM 120

Query: 121 ERKVMAAPVRYGSPEMEMEMAANYCIDCAICLEDFESGELCQIFPVCNHIFHYSCIHHWL 163
             KV AAPV YGS E+  +     CIDCAICLEDFE+GELCQ FPV            WL
Sbjct: 121 IEKV-AAPVSYGSSEVVAK-----CIDCAICLEDFENGELCQNFPV------------WL 162

[Close]

BLAST of MC10g0934 vs. ExPASy TrEMBL
Match: E5GBS2 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 152 bits (384), Expect = 1.00e-41
Identity = 97/166 (58.43%), Postives = 117/166 (70.48%), Query Frame = 0


Query: 1   MIPQVLAVPQSNPPPSLLPFLTAFSIIILIFISIVIFSVLASFAIIILIYIICQYLVGPT 60
           MIPQ L VPQSNPPPS+LPFLTAFSI+I+IFISI+IFSV+ASFAIII IYIIC+YL+G T
Sbjct: 1   MIPQALTVPQSNPPPSILPFLTAFSIVIVIFISIIIFSVVASFAIIIFIYIICKYLIGST 60

Query: 61  SF----TDLEAGEEEDN-----RDEILISRQ--ARHGGDV--------WREVLERKREVL 120
           S     +DLEAGE  +N     R  IL++    + HG D+        WRE +ER   ++
Sbjct: 61  SLDEHVSDLEAGETNENQRMIARSRILLTHHQTSSHGRDIMERSESNTWREGMERT--IM 120

Query: 121 ERKVMAAPVRYGSPEMEMEMAANYCIDCAICLEDFESGELCQIFPV 147
             KV AAPV YGS E+  +     CIDCAICLEDFE+GELCQ FP+
Sbjct: 121 IEKV-AAPVSYGSSEVVAK-----CIDCAICLEDFENGELCQNFPL 158

[Close]

BLAST of MC10g0934 vs. ExPASy TrEMBL
Match: A0A251PMJ1 (RING-type domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_4G182700 PE=4 SV=1)

HSP 1 Score: 110 bits (276), Expect = 8.74e-27
Identity = 71/189 (37.57%), Postives = 105/189 (55.56%), Query Frame = 0


Query: 14  PPSLLPFLTAFSIIILIFISIVIFSVLASFAIIILIYIICQYLVGPT---SFTDLEAGEE 73
           PP +   LT    II +++ I+ FS++ S  +I L Y++C+++  P       D EAG+E
Sbjct: 46  PPPVFSLLTFIGTIIFVYVCIIAFSIILSLLVIALFYVVCEFVWTPLYERRNRDPEAGDE 105

Query: 74  ----EDNRDE-----------ILISRQARHGGDVWREVLERKRE---------VLERKVM 133
               + NR+E           +L + +     D   EVLE +R+         +LE K +
Sbjct: 106 RLSFQPNREEWHDQATFYQAAVLHNLRVLEILDSIVEVLEERRDQRHQRDREQLLENK-L 165

Query: 134 AAPVRYGSPEMEMEMAANYCIDCAICLEDFESGELCQIFPVCNHIFHYSCIHHWLKRNTT 175
             P+ YGS E+EM      C DC IC+EDFE+ +LCQ+FP CNH FH  C++ WLK++ T
Sbjct: 166 PPPIAYGSHEIEMN-----CKDCVICMEDFETDQLCQVFPSCNHTFHSKCMNTWLKKSLT 225

[Close]

BLAST of MC10g0934 vs. TAIR 10
Match: AT3G18930.1 (RING/U-box superfamily protein )

HSP 1 Score: 69.7 bits (169), Expect = 2.7e-12
Identity = 29/63 (46.03%), Postives = 39/63 (61.90%), Query Frame = 0


Query: 113 GSPEMEMEMAANYCIDCAICLEDFESGELCQIFPVCNHIFHYSCIHHWLKRNTTCPICRC 172
           G P +    AAN C DCA+CL +FE G+  +  P+C H FH  CI  WL+ +  CP+CR 
Sbjct: 141 GKPAVGKTSAAN-CRDCAVCLLEFEEGDYVRTLPLCFHAFHLECIDEWLRSHPNCPLCRT 200

Query: 173 SIL 176
           +IL
Sbjct: 201 AIL 202

[Close]

BLAST of MC10g0934 vs. TAIR 10
Match: AT3G18930.2 (RING/U-box superfamily protein )

HSP 1 Score: 69.7 bits (169), Expect = 2.7e-12
Identity = 29/63 (46.03%), Postives = 39/63 (61.90%), Query Frame = 0


Query: 113 GSPEMEMEMAANYCIDCAICLEDFESGELCQIFPVCNHIFHYSCIHHWLKRNTTCPICRC 172
           G P +    AAN C DCA+CL +FE G+  +  P+C H FH  CI  WL+ +  CP+CR 
Sbjct: 141 GKPAVGKTSAAN-CRDCAVCLLEFEEGDYVRTLPLCFHAFHLECIDEWLRSHPNCPLCRT 200

Query: 173 SIL 176
           +IL
Sbjct: 201 AIL 202

[Close]

BLAST of MC10g0934 vs. TAIR 10
Match: AT1G53010.1 (RING/U-box superfamily protein )

HSP 1 Score: 65.5 bits (158), Expect = 5.0e-11
Identity = 53/172 (30.81%), Postives = 86/172 (50.00%), Query Frame = 0


Query: 11  SNPPPSLLPFLTAFSIIILIFISIVIFSVLASFAIIILIYIICQYLVGPTSFT----DLE 70
           S+     +  ++   + + I + I++  ++A+ A+I++IY+I   ++ P   T    DLE
Sbjct: 2   SSEEDDAISLISVLGLAVFIGLCILLVVLIATSALILVIYVIIDCILRPFLGTCLDLDLE 61

Query: 71  AG-EEEDNRDEILISRQARHGG----DVWREVLER--KREVLERKVMAAPVRYGSPEMEM 130
            G +    R  I+        G    D  RE  +R  K+ V+E  +    V  G+ E + 
Sbjct: 62  IGVQRGQQRARIVTYHTIISTGLRLPDFEREGKKRGLKQSVIETLLPKLLVGQGNHEEDE 121

Query: 131 EMAANYCIDCAICLEDFESGELCQIFPVCNHIFHYSCIHHWLKRNTTCPICR 172
           E +     +CAICL  +   E C++FPVC HI+H  CI  WLK + TCP CR
Sbjct: 122 EKSLE-SRECAICLSGYVVNEECRVFPVCRHIYHALCIDAWLKNHLTCPTCR 172

[Close]

BLAST of MC10g0934 vs. TAIR 10
Match: AT1G35330.1 (RING/U-box superfamily protein )

HSP 1 Score: 62.0 bits (149), Expect = 5.6e-10
Identity = 48/172 (27.91%), Postives = 78/172 (45.35%), Query Frame = 0


Query: 3   PQVLAVPQSNPPPSLLPFLTAFSIIILIFISIVIFSVLASFAIIILIYIICQYLVGPTSF 62
           P+  A P     P+ +P     ++II + +  ++FS+LA          +C Y    TS 
Sbjct: 30  PRTTAPPYIAQRPNQVP-----AVIIAMLMFTLLFSMLAC--------CVC-YKYTNTSP 89

Query: 63  TDLEAGEEEDNRDEILISRQARHGGDVWREVLERKREVLERKVMAAPVRYGSPEMEMEMA 122
               +  EE    E+  +R+   G  + ++V+      L  +V    +  G         
Sbjct: 90  HGTSSDTEEGGHGEVAFTRRTSRG--LGKDVINSFPSFLYSQVKGLKIGKGG-------- 149

Query: 123 ANYCIDCAICLEDFESGELCQIFPVCNHIFHYSCIHHWLKRNTTCPICRCSI 175
               ++CAICL +FE  E  ++ P C+H FH SCI  WL   +TCP+CR S+
Sbjct: 150 ----VECAICLNEFEDEETLRLMPPCSHAFHASCIDVWLSSRSTCPVCRASL 173

[Close]

BLAST of MC10g0934 vs. TAIR 10
Match: AT2G20030.1 (RING/U-box superfamily protein )

HSP 1 Score: 56.6 bits (135), Expect = 2.3e-08
Identity = 42/164 (25.61%), Postives = 76/164 (46.34%), Query Frame = 0


Query: 10  QSNPPPSLLPFLTAFSIIILIFISIVIFSVLASFAIIILIYIICQYLVGPTSFTDLEAGE 69
           QS PPP+L      F   + I     +FS++ +   ++L+Y  C +        DL +  
Sbjct: 23  QSPPPPNLYATSDLFKPSLAIITG--VFSIVFTLTFVLLVYAKCFH-------NDLRSET 82

Query: 70  EEDNRDEILISRQARHGGDVWREVLERKREV--LERKVMAAPVRYGSPEMEMEMAANYCI 129
           + D         + RH   +W+ +  R      L++K + +   +    ++        +
Sbjct: 83  DSD-------GERIRH-DRLWQGLFNRSSRFSGLDKKAIESLPFFRFSALK---GLKQGL 142

Query: 130 DCAICLEDFESGELCQIFPVCNHIFHYSCIHHWLKRNTTCPICR 172
           +C++CL  FE  E+ ++ P C H FH  CI  WL+++ TCP+CR
Sbjct: 143 ECSVCLSKFEDVEILRLLPKCRHAFHIGCIDQWLEQHATCPLCR 166

The following BLAST results are available for this feature:

BLAST of MC10g0934 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q67YI6	3.8e-11	46.03	RING-H2 finger protein ATL65 OS=Arabidopsis thaliana OX=3702 GN=ATL65 PE=2 SV=2	[more]
Q9C919	7.1e-10	30.81	Putative RING-H2 finger protein ATL19 OS=Arabidopsis thaliana OX=3702 GN=ATL19 P...	[more]
Q7XLY8	4.6e-09	46.81	E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp. japonica OX=3994...	[more]
Q9C7I1	7.9e-09	27.91	RING-H2 finger protein ATL34 OS=Arabidopsis thaliana OX=3702 GN=ATL34 PE=2 SV=1	[more]
Q5XF85	1.5e-07	25.00	E3 ubiquitin-protein ligase ATL42 OS=Arabidopsis thaliana OX=3702 GN=ATL42 PE=1 ...	[more]

BLAST of MC10g0934 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0060638.1	1.72e-68	62.44	putative RING-H2 finger protein ATL19 [Cucumis melo var. makuwa]	[more]
KAG6577373.1	5.70e-60	61.33	putative RING-H2 finger protein ATL19, partial [Cucurbita argyrosperma subsp. so...	[more]
KAG7027690.1	3.76e-57	58.92	putative RING-H2 finger protein ATL19, partial [Cucurbita argyrosperma subsp. ar...	[more]
KAG6600727.1	9.23e-56	57.67	putative RING-H2 finger protein ATL19, partial [Cucurbita argyrosperma subsp. so...	[more]
TYK02232.1	2.70e-43	56.04	putative RING-H2 finger protein ATL19 [Cucumis melo var. makuwa]	[more]

BLAST of MC10g0934 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UZF7	8.34e-69	62.44	Putative RING-H2 finger protein ATL19 OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A0A0L6M6	4.49e-68	61.73	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G104950 P...	[more]
A0A5D3BTV2	1.31e-43	56.04	Putative RING-H2 finger protein ATL19 OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
E5GBS2	1.00e-41	58.43	Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A251PMJ1	8.74e-27	37.57	RING-type domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_4G182700 ...	[more]

BLAST of MC10g0934 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G18930.1	2.7e-12	46.03	RING/U-box superfamily protein	[more]
AT3G18930.2	2.7e-12	46.03	RING/U-box superfamily protein	[more]
AT1G53010.1	5.0e-11	30.81	RING/U-box superfamily protein	[more]
AT1G35330.1	5.6e-10	27.91	RING/U-box superfamily protein	[more]
AT2G20030.1	2.3e-08	25.61	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 129..170 e-value: 1.8E-6 score: 37.5
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 128..171 e-value: 5.1E-13 score: 49.2
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 129..171 score: 12.946621
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 91..176 e-value: 3.9E-18 score: 66.9
None	No IPR available	PANTHER	PTHR45798	RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED	coord: 14..174
None	No IPR available	PANTHER	PTHR45798:SF72	ZINC FINGER, RING/FYVE/PHD-TYPE-RELATED	coord: 14..174
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 128..176

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC10g0934.1	MC10g0934.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane