MC10g0928 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC10g0928
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Senescence-associated protein, putative
Location	MC10: 8034394 .. 8034474 (-)
RNA-Seq Expression	MC10g0928
Synteny	MC10g0928

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GGCATAGACAATGATCCTTCCGCAGGTTCACCTACGAAAACCTTATTACGATATCTCCTTCCTCTAAATGATAATGTTCAG

mRNA sequence

GGCATAGACAATGATCCTTCCGCAGGTTCACCTACGAAAACCTTATTACGATATCTCCTTCCTCTAAATGATAATGTTCAG

Coding sequence (CDS)

GGCATAGACAATGATCCTTCCGCAGGTTCACCTACGAAAACCTTATTACGATATCTCCTTCCTCTAAATGATAATGTTCAG

Protein sequence

GIDNDPSAGSPTKTLLRYLLPLNDNVQ

Homology

[Close]

BLAST of MC10g0928 vs. ExPASy Swiss-Prot
Match: P0C5Q0 (Putative uncharacterized protein YLR154W-F OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=YLR154W-F PE=5 SV=1)

HSP 1 Score: 42.7 bits (99), Expect = 7.5e-04
Identity = 19/23 (82.61%), Postives = 21/23 (91.30%), Query Frame = 0


Query: 4  NDPSAGSPTKTLLRYLLPLNDNV 27
          NDPSAGSPT+TLLR L+PLND V
Sbjct: 18 NDPSAGSPTETLLRLLVPLNDQV 40

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BLAST of MC10g0928 vs. NCBI nr
Match: QHN90758.1 (Putative uncharacterized proteinW-F [Arachis hypogaea])

HSP 1 Score: 53.1 bits (126), Expect = 1.18e-07
Identity = 24/27 (88.89%), Postives = 25/27 (92.59%), Query Frame = 0


Query: 1  GIDNDPSAGSPTKTLLRYLLPLNDNVQ 27
          GIDNDPSAGSPT+TLLR LLPLND VQ
Sbjct: 56 GIDNDPSAGSPTETLLRLLLPLNDKVQ 82

[Close]

BLAST of MC10g0928 vs. NCBI nr
Match: PHT44506.1 (hypothetical protein CQW23_13664 [Capsicum baccatum])

HSP 1 Score: 53.9 bits (128), Expect = 1.27e-07
Identity = 24/27 (88.89%), Postives = 25/27 (92.59%), Query Frame = 0


Query: 1   GIDNDPSAGSPTKTLLRYLLPLNDNVQ 27
           G DNDPSAGSPT+TLLR LLPLNDNVQ
Sbjct: 96  GFDNDPSAGSPTETLLRLLLPLNDNVQ 122

[Close]

BLAST of MC10g0928 vs. NCBI nr
Match: PHT25542.1 (hypothetical protein CQW23_34830 [Capsicum baccatum])

HSP 1 Score: 53.1 bits (126), Expect = 1.51e-07
Identity = 24/27 (88.89%), Postives = 24/27 (88.89%), Query Frame = 0


Query: 1  GIDNDPSAGSPTKTLLRYLLPLNDNVQ 27
          G DNDPSAGSPTKTLLR LLPLND VQ
Sbjct: 51 GFDNDPSAGSPTKTLLRLLLPLNDKVQ 77

[Close]

BLAST of MC10g0928 vs. NCBI nr
Match: KZM80202.1 (hypothetical protein DCAR_032295 [Daucus carota subsp. sativus])

HSP 1 Score: 51.6 bits (122), Expect = 1.68e-07
Identity = 23/27 (85.19%), Postives = 24/27 (88.89%), Query Frame = 0


Query: 1  GIDNDPSAGSPTKTLLRYLLPLNDNVQ 27
          G DNDPSAGSPT+TLLR LLPLND VQ
Sbjct: 10 GFDNDPSAGSPTETLLRLLLPLNDKVQ 36

[Close]

BLAST of MC10g0928 vs. NCBI nr
Match: CAG1860269.1 (unnamed protein product [Musa acuminata subsp. malaccensis])

HSP 1 Score: 52.4 bits (124), Expect = 2.08e-07
Identity = 23/27 (85.19%), Postives = 25/27 (92.59%), Query Frame = 0


Query: 1  GIDNDPSAGSPTKTLLRYLLPLNDNVQ 27
          G+DNDPSAGSPT+TLLR LLPLND VQ
Sbjct: 50 GLDNDPSAGSPTETLLRLLLPLNDKVQ 76

[Close]

BLAST of MC10g0928 vs. ExPASy TrEMBL
Match: A0A2G2WGY2 (Uncharacterized protein OS=Capsicum baccatum OX=33114 GN=CQW23_13664 PE=4 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 6.14e-08
Identity = 24/27 (88.89%), Postives = 25/27 (92.59%), Query Frame = 0


Query: 1   GIDNDPSAGSPTKTLLRYLLPLNDNVQ 27
           G DNDPSAGSPT+TLLR LLPLNDNVQ
Sbjct: 96  GFDNDPSAGSPTETLLRLLLPLNDNVQ 122

[Close]

BLAST of MC10g0928 vs. ExPASy TrEMBL
Match: A0A2G2UXT7 (Uncharacterized protein OS=Capsicum baccatum OX=33114 GN=CQW23_34830 PE=4 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 7.30e-08
Identity = 24/27 (88.89%), Postives = 24/27 (88.89%), Query Frame = 0


Query: 1  GIDNDPSAGSPTKTLLRYLLPLNDNVQ 27
          G DNDPSAGSPTKTLLR LLPLND VQ
Sbjct: 51 GFDNDPSAGSPTKTLLRLLLPLNDKVQ 77

[Close]

BLAST of MC10g0928 vs. ExPASy TrEMBL
Match: A0A175YBL1 (Uncharacterized protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_032295 PE=4 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 8.14e-08
Identity = 23/27 (85.19%), Postives = 24/27 (88.89%), Query Frame = 0


Query: 1  GIDNDPSAGSPTKTLLRYLLPLNDNVQ 27
          G DNDPSAGSPT+TLLR LLPLND VQ
Sbjct: 10 GFDNDPSAGSPTETLLRLLLPLNDKVQ 36

[Close]

BLAST of MC10g0928 vs. ExPASy TrEMBL
Match: A0A328KQ26 (Uncharacterized protein (Fragment) OS=Bacillus sp. SRB_8 OX=1969377 GN=B5P40_32105 PE=4 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 1.08e-07
Identity = 23/27 (85.19%), Postives = 24/27 (88.89%), Query Frame = 0


Query: 1  GIDNDPSAGSPTKTLLRYLLPLNDNVQ 27
          G DNDPSAGSPT+TLLR LLPLND VQ
Sbjct: 22 GFDNDPSAGSPTETLLRLLLPLNDKVQ 48

[Close]

BLAST of MC10g0928 vs. ExPASy TrEMBL
Match: A0A2G2UV02 (Uncharacterized protein OS=Capsicum baccatum OX=33114 GN=CQW23_35724 PE=4 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 1.08e-07
Identity = 24/27 (88.89%), Postives = 24/27 (88.89%), Query Frame = 0


Query: 1   GIDNDPSAGSPTKTLLRYLLPLNDNVQ 27
           G DNDPSAGSPTKTLLR LLPLND VQ
Sbjct: 89  GFDNDPSAGSPTKTLLRLLLPLNDKVQ 115

The following BLAST results are available for this feature:

BLAST of MC10g0928 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0C5Q0	7.5e-04	82.61	Putative uncharacterized protein YLR154W-F OS=Saccharomyces cerevisiae (strain A...	[more]

BLAST of MC10g0928 vs. NCBI nr


Match Name	E-value	Identity	Description
QHN90758.1	1.18e-07	88.89	Putative uncharacterized proteinW-F [Arachis hypogaea]	[more]
PHT44506.1	1.27e-07	88.89	hypothetical protein CQW23_13664 [Capsicum baccatum]	[more]
PHT25542.1	1.51e-07	88.89	hypothetical protein CQW23_34830 [Capsicum baccatum]	[more]
KZM80202.1	1.68e-07	85.19	hypothetical protein DCAR_032295 [Daucus carota subsp. sativus]	[more]
CAG1860269.1	2.08e-07	85.19	unnamed protein product [Musa acuminata subsp. malaccensis]	[more]

BLAST of MC10g0928 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2G2WGY2	6.14e-08	88.89	Uncharacterized protein OS=Capsicum baccatum OX=33114 GN=CQW23_13664 PE=4 SV=1	[more]
A0A2G2UXT7	7.30e-08	88.89	Uncharacterized protein OS=Capsicum baccatum OX=33114 GN=CQW23_34830 PE=4 SV=1	[more]
A0A175YBL1	8.14e-08	85.19	Uncharacterized protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_032295 ...	[more]
A0A328KQ26	1.08e-07	85.19	Uncharacterized protein (Fragment) OS=Bacillus sp. SRB_8 OX=1969377 GN=B5P40_321...	[more]
A0A2G2UV02	1.08e-07	88.89	Uncharacterized protein OS=Capsicum baccatum OX=33114 GN=CQW23_35724 PE=4 SV=1	[more]

BLAST of MC10g0928 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC10g0928.1	MC10g0928.1	mRNA