MC10g0927 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC10g0927
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	S4 RNA-binding domain-containing protein
Location	MC10: 8014366 .. 8018546 (-)
RNA-Seq Expression	MC10g0927
Synteny	MC10g0927

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5polypeptideCDSutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

GCAGAAAATAATCAAGTTCGCGTACCACTAACAATGGCCGCTACGAGCATCGGAGCTCTGTGGAGTCTCAGAAGAGCAGCTCAAGCTTCGAGTTTCCGCATTCCCCTTGCCCTAAACCTCTCCTTCCACCAGGCCCGTTTTCCTCCTTCGCCGTCTTCTCCTCCGGGGTCGTCAGGTCTCGATTCCCTTTCTTCTCCATTGTTTCTTCTTCTACAATGCAAAATCCTCTGAATGCAATTACGAAACTATGAATTGTTATTGATTAGTAGGCGCATTTTTTCTCCAATTGCCCTGTGGTAGCTCACTAAGATCGAAATTGTAGAACAATTAGTTTTAGTTCGGGAGATAATAACCTTTGGATTGGGAATCAATTGGAAGTAAATTTCCATTTTTTTAAACTTATCTATGATTGCTTAAATTCCATTTTGAATTAATGGCATAAAGGGTGAGCATGATTGACGATTTCCATAATGTTCCTTGGTCTCTACTGCATCAAGTGCTTCTGCAGCGTATCTGCTTTTGTAGTTTTATTTTTACTCTAGGGTCTCATTCAATTGTGAAAGAGCACTTGAGCTTGCAGGTACCCAAGGGGTGCCTATGAGCTATGGGGTTCAAGCTTCCAAGTTAAAAACTTAATAATTTAAAGTCCACGTTGTCTCTTCGAGTCGGTCTTAATAGTGGCCAAAACTTCCCTAGAACGACATGAGTATAATGCAAGGAGTGAGACCTTTTGATACCTTAGATATCACAAAAAAAAAAACATAACAAATTATGAGCAACGTAACCTTCGTTTGGCAAAAAGTACTTCCTGCCTGTCTCCTACACCTATCAAATCCTTGAATTATTTCATTGTGGAAATGTAGTAAGAATGCAATTTATAACTCTAAAAATAATACATATTGTACGTGGAATGGGATAAAGGCTCATTTGTACTTCTTCTCGACACAGTCCTTTATGGTAACCCAAATATTGTTACTTAAATGATTCAATATTTGCATGTTAAGAGTCCACCCTATACTGTTTCAGGAATATGTCAATTAGTGCAAGCTGTAAAAGGAGACATTGATGTTTTACTCAACGGAGTAGGAGATAAAGGTGTTATTGTAGATGTGAAGCATATTCTTGTGATGGTATTGGTTATCAAAAGAAATCCTTCCTTTCCCTTCTAATTTGATGAATTTTGTATAAAAACAGCAATACGATAACCCTTTTGTCTCTTAGTTGTGAGGGATGATTCTGATTCTTCACTCTTTTGGTTTCATTTAGGCCAAACGTTCATTGTCAAGACGAGAAGTTCTCCATACGAACTTTCTCACCCCACCTGTGGTGAAAGAGTCAATGCTAGCTATACAAAAACTAGCTGACGTGAAAGCAATAGCTCAGGGAGGATACCCAGAGGTGAATATAAAAGTTTTGCTTCTCTCTTTTTTATTTTTTAAGTTGGGGCTTGGGTTTATGAATCTAAGACCTCTTGCTGATACCACACTTCTTTCAAGTTGACCAAATGTTTAGGCAGAGCGCTGCCGGATTTCTGTTGGGCATGCAGATGAACTAACAAGTGATCCAGACATAATTTCGGCATTGAGGTATCTTTCTTTAATCTTCTGCATTAATCCATTTTATCTTAGCTTTGGAAAAATCAGTTGTTCTTTTGTTCTTTCTTCTTCTTAATATAGTTTTCCTTCCCAGTATCACAGGAAATTTTACGTTTCACCCTTGCTCACACGGGGACTTCCTTGGATCAATTCTTGGTACAGGAATTGCTAGGGAAAAGCTTGGCGATATCATACTCCAGGTATCATTGCATTCAGTATTTACTTTGTATCCATTTGAAGTATAGTTACAACTGTCTGTTCTTATTCTTTGTGCACATTGCTACTTTCGGTTTCTTTTAAATGACTTGTGTTCTTTGTTTGAATTTGACTCATCAAGTATTATAAATGCATTACACTTTGGCTCTCTGCATTTGGTTCTATAATGAAAAAGTAGAATTATCTTTAACAAATCCCAAAAACGGATGGTAAAATTTGTGTTTCGGGTTATCATGCTCTGCCACCTGACTGTGTCCAGAACTTTGATCTGAAATGCTACTTCTTAAAATCTATGTTTCACTCCATCCACGTGGAACAAAACTTTATGAAAAAAATTAAGCTACAATGTCTAATTCCTTGCCTTGTCTATATGACTATATCCACAAGTACCTTTGTGTATATCTTTTAGATTTTTTATCCAAAGCAGCAACAAGGTTATCGTGAGCCATGTTTCTTTTATTCTCTTATTGTTACCATATTTTCAGGGAGAAAATGGAGCTCAAGTAGTACTTGTTCCAGAACTCGTCGACTTCCTTATATCGTCACTGCGCAAGGTAGTGTCATTGTCCTGGGTGATTGCTTCTAACACGATGACACAAAAATTAACACAAGAATGAAATATGTTCTTCCTCTGGGTGCATTTCTCGTGTGTTTAAACTATAAATACATATTTTGGTGAAGCCTACATAGCCTAATAGATACTCAAACTATTTGTATATTTGCTTCATTGATATCTTTATTTGTTATCTTTTTTTTTTTAAATGTAATTATTTGTTATGGCATTCTTAATTTCAGGTTGGTAATGTCACAGTTTCTTGTACGAGGATTCCGTTGACAGCTCTTGATTATGAACCACCAAAGTATGAAGTTATATCAGTGATTTTCATATTGGTTTCCATGTTTATTTTGATGTACTATTTTATTTTCTCCTTTGCAGGACTAAGACATTTAACACCATTGAGGCATCTCTTAGGGTGGATGCTATAGCAAGTGCTGGGTTCAAGATTTCACGGTCCAAACTAGTGGATTTAATCAGGTACAACGGCTTCTACTAACCAACTGATCTTTCACATTGCTATCATTTGTAGAATAGAATGAGTCAATCATGAACTTTGGTATCTTATTGAAAAAATGGTGATGTTTCTCCATTGATCAAGTATTTCAATTTTTAGGAAATATCATGATCATCCAAGAAGAAGGGTTTCAATTTTTTTTTTCAAATGAATGATTCGAAGAATATTTTCTAAGTTTCTACCCTGAAAAATAAAGGAATAATTTATAACAATTTTTGGTTTTTGTGTTGTTGATTCCTAAGCATAGTGTTTCCTCTCCTCTACTGCCTATTTTAGTGGAGCATAGTTGTCTTAATCATCGGTTACACCTTTTGCTCAATATTAAAATGGGCAATTAAAACATATGAAGTTACATTAAACTGGGTATACACAACAAACTCTCATAATAATGTAATGCTTTGCTTATATTCTTTGTTGAATTACGGCATCGAAGTATTTGTAAGTGGTTAAAACGTGCCATCATATGGTAGTGAATGATAATAGATAACTTTCTCAAAGTTTCTGGGGAATAGGGTGTAGCAATGTATTATCTTCCATTTCTTTTGTGAAAGTACATGAACCTGAAATTGTTATATGAGCAGCAGTGGTGATGTTCGTGTCAATTGGACACCGGTTACAAAAAATGGAACCACACTGAAGACTGGTGATGTTGTTTCTGTTAGTGGTAAAGGCAGACTAAAGGTGAGCTTTTCAGCTCAATGGAAACTGAAACTAGTTGCACCGAGTTTATATATTTGCTAACTTAGCATTCCTGACTTCTGGTTATTTTCCTCATATTCAGATTGGAGAAATAAATTCTACGAAAAAAGGGAAATTTTCTGTTGAGCTTATCAGGTACGTGTAAGCTCTGGCGTTATTGGATCGTTTCGAGTTGAACCAAGTAAGATATCAGTAGCAAAAGCTCCCTCATGAACATCATGATTCCTTCTTTGGGAAGAAGGAAGGTAAGTCACTGTTCAACATGACACGAACCTGATTGTACATAAAATCTGAACATCCATTCATCCATTCTTAAAAATTTTGCATTTGGAAAATTTATCTCTTCACATTTCTATGCCGGGAAATATTGGTTCTTTTGTCTTTGGGATGTGTGATTTTATGTCCCTGGAATGGAATTTATTATGCAAATTAATGTTGTCAAAGGGAGGGAATGTAAATACAAAAGTTATAGCTTCGCAGTAACTATTTGTAGATCCAATGATATTTGACCTATTTCCATCCCGTAATATGCAGTTATTAATGTATATTGGTTGGTGTACAACTATCAATTTTTGTTAATTACTGATTTAGTTTTCAA

mRNA sequence

GCAGAAAATAATCAAGTTCGCGTACCACTAACAATGGCCGCTACGAGCATCGGAGCTCTGTGGAGTCTCAGAAGAGCAGCTCAAGCTTCGAGTTTCCGCATTCCCCTTGCCCTAAACCTCTCCTTCCACCAGGCCCGTTTTCCTCCTTCGCCGTCTTCTCCTCCGGGGTCGTCAGGAATATGTCAATTAGTGCAAGCTGTAAAAGGAGACATTGATGTTTTACTCAACGGAGTAGGAGATAAAGGTGTTATTGTAGATGTGAAGCATATTCTTGTGATGGCCAAACGTTCATTGTCAAGACGAGAAGTTCTCCATACGAACTTTCTCACCCCACCTGTGGTGAAAGAGTCAATGCTAGCTATACAAAAACTAGCTGACGTGAAAGCAATAGCTCAGGGAGGATACCCAGAGGCAGAGCGCTGCCGGATTTCTGTTGGGCATGCAGATGAACTAACAAGTGATCCAGACATAATTTCGGCATTGAGTATCACAGGAAATTTTACGTTTCACCCTTGCTCACACGGGGACTTCCTTGGATCAATTCTTGGTACAGGAATTGCTAGGGAAAAGCTTGGCGATATCATACTCCAGGGAGAAAATGGAGCTCAAGTAGTACTTGTTCCAGAACTCGTCGACTTCCTTATATCGTCACTGCGCAAGGTTGGTAATGTCACAGTTTCTTGTACGAGGATTCCGTTGACAGCTCTTGATTATGAACCACCAAAGACTAAGACATTTAACACCATTGAGGCATCTCTTAGGGTGGATGCTATAGCAAGTGCTGGGTTCAAGATTTCACGGTCCAAACTAGTGGATTTAATCAGCAGTGGTGATGTTCGTGTCAATTGGACACCGGTTACAAAAAATGGAACCACACTGAAGACTGGTGATGTTGTTTCTGTTAGTGGTAAAGGCAGACTAAAGATTGGAGAAATAAATTCTACGAAAAAAGGGAAATTTTCTGTTGAGCTTATCAGGTACGTGTAAGCTCTGGCGTTATTGGATCGTTTCGAGTTGAACCAAGTAAGATATCAGTAGCAAAAGCTCCCTCATGAACATCATGATTCCTTCTTTGGGAAGAAGGAAGGTAAGTCACTGTTCAACATGACACGAACCTGATTGTACATAAAATCTGAACATCCATTCATCCATTCTTAAAAATTTTGCATTTGGAAAATTTATCTCTTCACATTTCTATGCCGGGAAATATTGGTTCTTTTGTCTTTGGGATGTGTGATTTTATGTCCCTGGAATGGAATTTATTATGCAAATTAATGTTGTCAAAGGGAGGGAATGTAAATACAAAAGTTATAGCTTCGCAGTAACTATTTGTAGATCCAATGATATTTGACCTATTTCCATCCCGTAATATGCAGTTATTAATGTATATTGGTTGGTGTACAACTATCAATTTTTGTTAATTACTGATTTAGTTTTCAA

Coding sequence (CDS)

ATGGCCGCTACGAGCATCGGAGCTCTGTGGAGTCTCAGAAGAGCAGCTCAAGCTTCGAGTTTCCGCATTCCCCTTGCCCTAAACCTCTCCTTCCACCAGGCCCGTTTTCCTCCTTCGCCGTCTTCTCCTCCGGGGTCGTCAGGAATATGTCAATTAGTGCAAGCTGTAAAAGGAGACATTGATGTTTTACTCAACGGAGTAGGAGATAAAGGTGTTATTGTAGATGTGAAGCATATTCTTGTGATGGCCAAACGTTCATTGTCAAGACGAGAAGTTCTCCATACGAACTTTCTCACCCCACCTGTGGTGAAAGAGTCAATGCTAGCTATACAAAAACTAGCTGACGTGAAAGCAATAGCTCAGGGAGGATACCCAGAGGCAGAGCGCTGCCGGATTTCTGTTGGGCATGCAGATGAACTAACAAGTGATCCAGACATAATTTCGGCATTGAGTATCACAGGAAATTTTACGTTTCACCCTTGCTCACACGGGGACTTCCTTGGATCAATTCTTGGTACAGGAATTGCTAGGGAAAAGCTTGGCGATATCATACTCCAGGGAGAAAATGGAGCTCAAGTAGTACTTGTTCCAGAACTCGTCGACTTCCTTATATCGTCACTGCGCAAGGTTGGTAATGTCACAGTTTCTTGTACGAGGATTCCGTTGACAGCTCTTGATTATGAACCACCAAAGACTAAGACATTTAACACCATTGAGGCATCTCTTAGGGTGGATGCTATAGCAAGTGCTGGGTTCAAGATTTCACGGTCCAAACTAGTGGATTTAATCAGCAGTGGTGATGTTCGTGTCAATTGGACACCGGTTACAAAAAATGGAACCACACTGAAGACTGGTGATGTTGTTTCTGTTAGTGGTAAAGGCAGACTAAAGATTGGAGAAATAAATTCTACGAAAAAAGGGAAATTTTCTGTTGAGCTTATCAGGTACGTGTAA

Protein sequence

MAATSIGALWSLRRAAQASSFRIPLALNLSFHQARFPPSPSSPPGSSGICQLVQAVKGDIDVLLNGVGDKGVIVDVKHILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVKAIAQGGYPEAERCRISVGHADELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGIAREKLGDIILQGENGAQVVLVPELVDFLISSLRKVGNVTVSCTRIPLTALDYEPPKTKTFNTIEASLRVDAIASAGFKISRSKLVDLISSGDVRVNWTPVTKNGTTLKTGDVVSVSGKGRLKIGEINSTKKGKFSVELIRYV

Homology

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BLAST of MC10g0927 vs. ExPASy Swiss-Prot
Match: P71020 (Putative RNA-binding protein YlmH OS=Bacillus subtilis (strain 168) OX=224308 GN=ylmH PE=4 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 2.5e-18
Identity = 68/225 (30.22%), Postives = 112/225 (49.78%), Query Frame = 0


Query: 95  TNFLTPPVVKESML--AIQKLADVKAIAQGGYPEAERCRISVGHADELTSDPDI-ISALS 154
           T+FL P   +E ++  A+   ADV     GGY  AER R  +        + D  + A +
Sbjct: 35  TDFLDP---REQVILSAVTGQADVGLAFSGGYDRAERKRAILFPEYITPEESDFELQAFN 94

Query: 155 ITGNFTFHPCSHGDFLGSILGTGIAREKLGDIILQGENGAQVVLVPELVDFLISSLRKVG 214
           +     F    H   LG+++G G+ R+K GDI+   E   Q+++  +  DF+ + L + G
Sbjct: 95  VRYADKFVSVDHRSLLGALMGIGLKRQKFGDIVF-SETAVQLIVSADTADFVAAQLTQAG 154

Query: 215 NVTVSCTRIPLTALDYEPPKTKTFNTIEASLRVDAIASAGFKISRSKLVDLISSGDVRVN 274
              VS  +I L+ L+      +  +   +SLR+DA+ ++  + SR K   L+ +G V+VN
Sbjct: 155 KAAVSLEKIDLSDLNIPAVDVEIRDDTVSSLRLDAVCASMSRQSRQKSQTLVKNGLVKVN 214

Query: 275 WTPVTKNGTTLKTGDVVSVSGKGRLKIGEI-NSTKKGKFSVELIR 316
           W  V      +  GD++S+ G GR  + +I   TKK K+ V   R
Sbjct: 215 WKVVEDPSYIVAEGDMLSIRGFGRCSLTKIEGKTKKDKWRVTFER 255

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BLAST of MC10g0927 vs. NCBI nr
Match: XP_022142743.1 (uncharacterized protein LOC111012786 isoform X1 [Momordica charantia])

HSP 1 Score: 608 bits (1568), Expect = 5.10e-219
Identity = 317/317 (100.00%), Postives = 317/317 (100.00%), Query Frame = 0


Query: 1   MAATSIGALWSLRRAAQASSFRIPLALNLSFHQARFPPSPSSPPGSSGICQLVQAVKGDI 60
           MAATSIGALWSLRRAAQASSFRIPLALNLSFHQARFPPSPSSPPGSSGICQLVQAVKGDI
Sbjct: 1   MAATSIGALWSLRRAAQASSFRIPLALNLSFHQARFPPSPSSPPGSSGICQLVQAVKGDI 60

Query: 61  DVLLNGVGDKGVIVDVKHILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVKAIA 120
           DVLLNGVGDKGVIVDVKHILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVKAIA
Sbjct: 61  DVLLNGVGDKGVIVDVKHILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVKAIA 120

Query: 121 QGGYPEAERCRISVGHADELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGIAREKL 180
           QGGYPEAERCRISVGHADELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGIAREKL
Sbjct: 121 QGGYPEAERCRISVGHADELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGIAREKL 180

Query: 181 GDIILQGENGAQVVLVPELVDFLISSLRKVGNVTVSCTRIPLTALDYEPPKTKTFNTIEA 240
           GDIILQGENGAQVVLVPELVDFLISSLRKVGNVTVSCTRIPLTALDYEPPKTKTFNTIEA
Sbjct: 181 GDIILQGENGAQVVLVPELVDFLISSLRKVGNVTVSCTRIPLTALDYEPPKTKTFNTIEA 240

Query: 241 SLRVDAIASAGFKISRSKLVDLISSGDVRVNWTPVTKNGTTLKTGDVVSVSGKGRLKIGE 300
           SLRVDAIASAGFKISRSKLVDLISSGDVRVNWTPVTKNGTTLKTGDVVSVSGKGRLKIGE
Sbjct: 241 SLRVDAIASAGFKISRSKLVDLISSGDVRVNWTPVTKNGTTLKTGDVVSVSGKGRLKIGE 300

Query: 301 INSTKKGKFSVELIRYV 317
           INSTKKGKFSVELIRYV
Sbjct: 301 INSTKKGKFSVELIRYV 317

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BLAST of MC10g0927 vs. NCBI nr
Match: XP_022142745.1 (uncharacterized protein LOC111012786 isoform X2 [Momordica charantia])

HSP 1 Score: 602 bits (1552), Expect = 1.35e-216
Identity = 316/317 (99.68%), Postives = 316/317 (99.68%), Query Frame = 0


Query: 1   MAATSIGALWSLRRAAQASSFRIPLALNLSFHQARFPPSPSSPPGSSGICQLVQAVKGDI 60
           MAATSIGALWSLRRAAQASSFRIPLALNLSFHQARFPPSPSSPPGSSGICQLVQAVKGDI
Sbjct: 1   MAATSIGALWSLRRAAQASSFRIPLALNLSFHQARFPPSPSSPPGSSGICQLVQAVKGDI 60

Query: 61  DVLLNGVGDKGVIVDVKHILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVKAIA 120
           DVLLNGVGDKGVIVDVKHILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVKAIA
Sbjct: 61  DVLLNGVGDKGVIVDVKHILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVKAIA 120

Query: 121 QGGYPEAERCRISVGHADELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGIAREKL 180
           QGGYPEAERCRISVGHADELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGIAREKL
Sbjct: 121 QGGYPEAERCRISVGHADELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGIAREKL 180

Query: 181 GDIILQGENGAQVVLVPELVDFLISSLRKVGNVTVSCTRIPLTALDYEPPKTKTFNTIEA 240
           GDIILQGENGAQVVLVPELVDFLISSLRKVGNVTVSCTRIPLTALDYEPPKTKTFNTIEA
Sbjct: 181 GDIILQGENGAQVVLVPELVDFLISSLRKVGNVTVSCTRIPLTALDYEPPKTKTFNTIEA 240

Query: 241 SLRVDAIASAGFKISRSKLVDLISSGDVRVNWTPVTKNGTTLKTGDVVSVSGKGRLKIGE 300
           SLRVDAIASAGFKISRSKLVDLIS GDVRVNWTPVTKNGTTLKTGDVVSVSGKGRLKIGE
Sbjct: 241 SLRVDAIASAGFKISRSKLVDLIS-GDVRVNWTPVTKNGTTLKTGDVVSVSGKGRLKIGE 300

Query: 301 INSTKKGKFSVELIRYV 317
           INSTKKGKFSVELIRYV
Sbjct: 301 INSTKKGKFSVELIRYV 316

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BLAST of MC10g0927 vs. NCBI nr
Match: XP_038899605.1 (putative RNA-binding protein YlmH [Benincasa hispida])

HSP 1 Score: 561 bits (1445), Expect = 3.17e-200
Identity = 293/320 (91.56%), Postives = 305/320 (95.31%), Query Frame = 0


Query: 1   MAATSIGALWSLRRAAQASSFRIPLALNL---SFHQARFPPSPSSPPGSSGICQLVQAVK 60
           MAATSIGA WSLRRAAQ+SSFR PLA+NL   SFH+ARFP SPSSP GSSGICQLVQAVK
Sbjct: 1   MAATSIGARWSLRRAAQSSSFRSPLAVNLNKLSFHEARFPSSPSSPLGSSGICQLVQAVK 60

Query: 61  GDIDVLLNGVGDKGVIVDVKHILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVK 120
           GDIDVLLNGVGDKGVIVDVKHILVMAKRSLSRR VLHTNFLTPPVVKES+LA+QKLADVK
Sbjct: 61  GDIDVLLNGVGDKGVIVDVKHILVMAKRSLSRRVVLHTNFLTPPVVKESILALQKLADVK 120

Query: 121 AIAQGGYPEAERCRISVGHADELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGIAR 180
           AIAQGGYPEAERCRISVGHADEL SDPDI+SALSITGNF FHPCSHGDFLG+ILGTGIAR
Sbjct: 121 AIAQGGYPEAERCRISVGHADELLSDPDIVSALSITGNFMFHPCSHGDFLGAILGTGIAR 180

Query: 181 EKLGDIILQGENGAQVVLVPELVDFLISSLRKVGNVTVSCTRIPLTALDYEPPKTKTFNT 240
           EKLGDIILQ E GAQVV+VPELVDFL SSLRKVGNVTVSCTRIPLTALDYEPPKTKTF T
Sbjct: 181 EKLGDIILQEEKGAQVVVVPELVDFLASSLRKVGNVTVSCTRIPLTALDYEPPKTKTFKT 240

Query: 241 IEASLRVDAIASAGFKISRSKLVDLISSGDVRVNWTPVTKNGTTLKTGDVVSVSGKGRLK 300
           IEASLRVDA+ASAGFKISRSKLVDLISSGDVRVNWTP+TKNGT LKTGD+VSVSGKGRLK
Sbjct: 241 IEASLRVDALASAGFKISRSKLVDLISSGDVRVNWTPITKNGTILKTGDIVSVSGKGRLK 300

Query: 301 IGEINSTKKGKFSVELIRYV 317
           IGEINSTKKGKF+VELIRYV
Sbjct: 301 IGEINSTKKGKFAVELIRYV 320

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BLAST of MC10g0927 vs. NCBI nr
Match: XP_004146247.1 (uncharacterized protein LOC101221944 [Cucumis sativus] >XP_031738291.1 uncharacterized protein LOC101221944 [Cucumis sativus] >KGN57626.1 hypothetical protein Csa_011390 [Cucumis sativus])

HSP 1 Score: 549 bits (1415), Expect = 1.14e-195
Identity = 292/318 (91.82%), Postives = 302/318 (94.97%), Query Frame = 0


Query: 3   ATSIGALWSLRRAAQASSFRIPLALNLS---FHQARFPPSPSSPPGSSGICQLVQAVKGD 62
           ATSI ALWSLRRAAQ SSFR PLALNL+   F++ARFP   SSP G+SGICQLVQAVKGD
Sbjct: 5   ATSIAALWSLRRAAQFSSFRRPLALNLNRLCFNEARFP---SSPLGTSGICQLVQAVKGD 64

Query: 63  IDVLLNGVGDKGVIVDVKHILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVKAI 122
           IDVLLNGVGDKGVIVDVK ILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVKAI
Sbjct: 65  IDVLLNGVGDKGVIVDVKQILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVKAI 124

Query: 123 AQGGYPEAERCRISVGHADELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGIAREK 182
           AQGGYPEAERCRISVGHADELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGIAREK
Sbjct: 125 AQGGYPEAERCRISVGHADELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGIAREK 184

Query: 183 LGDIILQGENGAQVVLVPELVDFLISSLRKVGNVTVSCTRIPLTALDYEPPKTKTFNTIE 242
           LGDI+LQ E GAQVV+VPELVDFLISSLRKVGNVTVSCTRIPLTAL+YEPPKTKTF TIE
Sbjct: 185 LGDIMLQEETGAQVVIVPELVDFLISSLRKVGNVTVSCTRIPLTALEYEPPKTKTFKTIE 244

Query: 243 ASLRVDAIASAGFKISRSKLVDLISSGDVRVNWTPVTKNGTTLKTGDVVSVSGKGRLKIG 302
           ASLRVDAIASAGFKISRSKLVDLISSGDVRVNWT +TKNGT LKTGD+VSVSGKGRLKIG
Sbjct: 245 ASLRVDAIASAGFKISRSKLVDLISSGDVRVNWTSITKNGTILKTGDIVSVSGKGRLKIG 304

Query: 303 EINSTKKGKFSVELIRYV 317
           EINSTKKGKF+VELIRYV
Sbjct: 305 EINSTKKGKFAVELIRYV 319

[Close]

BLAST of MC10g0927 vs. NCBI nr
Match: KAG6600381.1 (hypothetical protein SDJN03_05614, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031043.1 ylmH [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 549 bits (1415), Expect = 1.27e-195
Identity = 283/319 (88.71%), Postives = 300/319 (94.04%), Query Frame = 0


Query: 2   AATSIGALWSLRRAAQASSFRIPLALNL---SFHQARFPPSPSSPPGSSGICQLVQAVKG 61
           A  SIGALWSLRRAAQ+SSFR PLA+NL   SFH+ARFP SPSSP G+SG+CQLVQAVKG
Sbjct: 4   ATASIGALWSLRRAAQSSSFRTPLAINLGKVSFHEARFPSSPSSPLGASGMCQLVQAVKG 63

Query: 62  DIDVLLNGVGDKGVIVDVKHILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVKA 121
           DIDVLLNGVGDKGVIVDVKHILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVKA
Sbjct: 64  DIDVLLNGVGDKGVIVDVKHILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVKA 123

Query: 122 IAQGGYPEAERCRISVGHADELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGIARE 181
           IAQGGYPEAERCRISVGHADELTSDPD++SALSITGNF FH C+HGDFLG+ILGTGIARE
Sbjct: 124 IAQGGYPEAERCRISVGHADELTSDPDVVSALSITGNFVFHTCTHGDFLGAILGTGIARE 183

Query: 182 KLGDIILQGENGAQVVLVPELVDFLISSLRKVGNVTVSCTRIPLTALDYEPPKTKTFNTI 241
           KLGDIILQ E GAQVV+VPELVDFL+SSLRKVGNVTVSCTRIPLT LDYEPPKTKTF TI
Sbjct: 184 KLGDIILQEEKGAQVVIVPELVDFLVSSLRKVGNVTVSCTRIPLTDLDYEPPKTKTFKTI 243

Query: 242 EASLRVDAIASAGFKISRSKLVDLISSGDVRVNWTPVTKNGTTLKTGDVVSVSGKGRLKI 301
           EASLRVDA+ASAGFKISRSKLVD IS GDVRVNWT +TKNGT LKTGD+VSVSGKGRLKI
Sbjct: 244 EASLRVDALASAGFKISRSKLVDFISGGDVRVNWTTITKNGTILKTGDIVSVSGKGRLKI 303

Query: 302 GEINSTKKGKFSVELIRYV 317
           GEIN TKKGKF++ELI+YV
Sbjct: 304 GEINPTKKGKFAIELIKYV 322

[Close]

BLAST of MC10g0927 vs. ExPASy TrEMBL
Match: A0A6J1CP18 (uncharacterized protein LOC111012786 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111012786 PE=4 SV=1)

HSP 1 Score: 608 bits (1568), Expect = 2.47e-219
Identity = 317/317 (100.00%), Postives = 317/317 (100.00%), Query Frame = 0


Query: 1   MAATSIGALWSLRRAAQASSFRIPLALNLSFHQARFPPSPSSPPGSSGICQLVQAVKGDI 60
           MAATSIGALWSLRRAAQASSFRIPLALNLSFHQARFPPSPSSPPGSSGICQLVQAVKGDI
Sbjct: 1   MAATSIGALWSLRRAAQASSFRIPLALNLSFHQARFPPSPSSPPGSSGICQLVQAVKGDI 60

Query: 61  DVLLNGVGDKGVIVDVKHILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVKAIA 120
           DVLLNGVGDKGVIVDVKHILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVKAIA
Sbjct: 61  DVLLNGVGDKGVIVDVKHILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVKAIA 120

Query: 121 QGGYPEAERCRISVGHADELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGIAREKL 180
           QGGYPEAERCRISVGHADELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGIAREKL
Sbjct: 121 QGGYPEAERCRISVGHADELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGIAREKL 180

Query: 181 GDIILQGENGAQVVLVPELVDFLISSLRKVGNVTVSCTRIPLTALDYEPPKTKTFNTIEA 240
           GDIILQGENGAQVVLVPELVDFLISSLRKVGNVTVSCTRIPLTALDYEPPKTKTFNTIEA
Sbjct: 181 GDIILQGENGAQVVLVPELVDFLISSLRKVGNVTVSCTRIPLTALDYEPPKTKTFNTIEA 240

Query: 241 SLRVDAIASAGFKISRSKLVDLISSGDVRVNWTPVTKNGTTLKTGDVVSVSGKGRLKIGE 300
           SLRVDAIASAGFKISRSKLVDLISSGDVRVNWTPVTKNGTTLKTGDVVSVSGKGRLKIGE
Sbjct: 241 SLRVDAIASAGFKISRSKLVDLISSGDVRVNWTPVTKNGTTLKTGDVVSVSGKGRLKIGE 300

Query: 301 INSTKKGKFSVELIRYV 317
           INSTKKGKFSVELIRYV
Sbjct: 301 INSTKKGKFSVELIRYV 317

[Close]

BLAST of MC10g0927 vs. ExPASy TrEMBL
Match: A0A6J1CLT4 (uncharacterized protein LOC111012786 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111012786 PE=4 SV=1)

HSP 1 Score: 602 bits (1552), Expect = 6.54e-217
Identity = 316/317 (99.68%), Postives = 316/317 (99.68%), Query Frame = 0


Query: 1   MAATSIGALWSLRRAAQASSFRIPLALNLSFHQARFPPSPSSPPGSSGICQLVQAVKGDI 60
           MAATSIGALWSLRRAAQASSFRIPLALNLSFHQARFPPSPSSPPGSSGICQLVQAVKGDI
Sbjct: 1   MAATSIGALWSLRRAAQASSFRIPLALNLSFHQARFPPSPSSPPGSSGICQLVQAVKGDI 60

Query: 61  DVLLNGVGDKGVIVDVKHILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVKAIA 120
           DVLLNGVGDKGVIVDVKHILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVKAIA
Sbjct: 61  DVLLNGVGDKGVIVDVKHILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVKAIA 120

Query: 121 QGGYPEAERCRISVGHADELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGIAREKL 180
           QGGYPEAERCRISVGHADELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGIAREKL
Sbjct: 121 QGGYPEAERCRISVGHADELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGIAREKL 180

Query: 181 GDIILQGENGAQVVLVPELVDFLISSLRKVGNVTVSCTRIPLTALDYEPPKTKTFNTIEA 240
           GDIILQGENGAQVVLVPELVDFLISSLRKVGNVTVSCTRIPLTALDYEPPKTKTFNTIEA
Sbjct: 181 GDIILQGENGAQVVLVPELVDFLISSLRKVGNVTVSCTRIPLTALDYEPPKTKTFNTIEA 240

Query: 241 SLRVDAIASAGFKISRSKLVDLISSGDVRVNWTPVTKNGTTLKTGDVVSVSGKGRLKIGE 300
           SLRVDAIASAGFKISRSKLVDLIS GDVRVNWTPVTKNGTTLKTGDVVSVSGKGRLKIGE
Sbjct: 241 SLRVDAIASAGFKISRSKLVDLIS-GDVRVNWTPVTKNGTTLKTGDVVSVSGKGRLKIGE 300

Query: 301 INSTKKGKFSVELIRYV 317
           INSTKKGKFSVELIRYV
Sbjct: 301 INSTKKGKFSVELIRYV 316

[Close]

BLAST of MC10g0927 vs. ExPASy TrEMBL
Match: A0A0A0LC56 (S4 RNA-binding domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G233470 PE=4 SV=1)

HSP 1 Score: 549 bits (1415), Expect = 5.50e-196
Identity = 292/318 (91.82%), Postives = 302/318 (94.97%), Query Frame = 0


Query: 3   ATSIGALWSLRRAAQASSFRIPLALNLS---FHQARFPPSPSSPPGSSGICQLVQAVKGD 62
           ATSI ALWSLRRAAQ SSFR PLALNL+   F++ARFP   SSP G+SGICQLVQAVKGD
Sbjct: 5   ATSIAALWSLRRAAQFSSFRRPLALNLNRLCFNEARFP---SSPLGTSGICQLVQAVKGD 64

Query: 63  IDVLLNGVGDKGVIVDVKHILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVKAI 122
           IDVLLNGVGDKGVIVDVK ILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVKAI
Sbjct: 65  IDVLLNGVGDKGVIVDVKQILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVKAI 124

Query: 123 AQGGYPEAERCRISVGHADELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGIAREK 182
           AQGGYPEAERCRISVGHADELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGIAREK
Sbjct: 125 AQGGYPEAERCRISVGHADELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGIAREK 184

Query: 183 LGDIILQGENGAQVVLVPELVDFLISSLRKVGNVTVSCTRIPLTALDYEPPKTKTFNTIE 242
           LGDI+LQ E GAQVV+VPELVDFLISSLRKVGNVTVSCTRIPLTAL+YEPPKTKTF TIE
Sbjct: 185 LGDIMLQEETGAQVVIVPELVDFLISSLRKVGNVTVSCTRIPLTALEYEPPKTKTFKTIE 244

Query: 243 ASLRVDAIASAGFKISRSKLVDLISSGDVRVNWTPVTKNGTTLKTGDVVSVSGKGRLKIG 302
           ASLRVDAIASAGFKISRSKLVDLISSGDVRVNWT +TKNGT LKTGD+VSVSGKGRLKIG
Sbjct: 245 ASLRVDAIASAGFKISRSKLVDLISSGDVRVNWTSITKNGTILKTGDIVSVSGKGRLKIG 304

Query: 303 EINSTKKGKFSVELIRYV 317
           EINSTKKGKF+VELIRYV
Sbjct: 305 EINSTKKGKFAVELIRYV 319

[Close]

BLAST of MC10g0927 vs. ExPASy TrEMBL
Match: A0A6J1J103 (uncharacterized protein LOC111480897 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111480897 PE=4 SV=1)

HSP 1 Score: 547 bits (1409), Expect = 5.04e-195
Identity = 284/319 (89.03%), Postives = 299/319 (93.73%), Query Frame = 0


Query: 2   AATSIGALWSLRRAAQASSFRIPLALNLS---FHQARFPPSPSSPPGSSGICQLVQAVKG 61
           A  SIGALWSLRRAAQ+SS R PLA+NLS   FH+ARFP SPSSP GSSG+CQLVQAVKG
Sbjct: 4   ATASIGALWSLRRAAQSSSLRTPLAVNLSKVSFHEARFPTSPSSPLGSSGMCQLVQAVKG 63

Query: 62  DIDVLLNGVGDKGVIVDVKHILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVKA 121
           DIDVLLNGVGDKGVIVDVKHILVMAKRSLSRREVLHTNFLTPPVVKESMLAI+KLADVKA
Sbjct: 64  DIDVLLNGVGDKGVIVDVKHILVMAKRSLSRREVLHTNFLTPPVVKESMLAIKKLADVKA 123

Query: 122 IAQGGYPEAERCRISVGHADELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGIARE 181
           IAQGGYPEAERCRISVGHADELTSDPD++SALSITGNF FH C+HGDFLG+ILGTGIARE
Sbjct: 124 IAQGGYPEAERCRISVGHADELTSDPDVVSALSITGNFMFHTCTHGDFLGAILGTGIARE 183

Query: 182 KLGDIILQGENGAQVVLVPELVDFLISSLRKVGNVTVSCTRIPLTALDYEPPKTKTFNTI 241
           KLGDIILQ E GAQVV+VPELVDFL+SSL KVGNVTVSCTRIPLT LDYEPPKTKTF TI
Sbjct: 184 KLGDIILQEEKGAQVVIVPELVDFLVSSLHKVGNVTVSCTRIPLTDLDYEPPKTKTFKTI 243

Query: 242 EASLRVDAIASAGFKISRSKLVDLISSGDVRVNWTPVTKNGTTLKTGDVVSVSGKGRLKI 301
           EASLRVDA+ASAGFKISRSKLVD ISSGDVRVNWT +TKNGT LKTGD+VSVSGKGRLKI
Sbjct: 244 EASLRVDALASAGFKISRSKLVDFISSGDVRVNWTTITKNGTILKTGDIVSVSGKGRLKI 303

Query: 302 GEINSTKKGKFSVELIRYV 317
           GEIN TKKGKF+VELIRYV
Sbjct: 304 GEINPTKKGKFAVELIRYV 322

[Close]

BLAST of MC10g0927 vs. ExPASy TrEMBL
Match: A0A1S3C3I2 (putative RNA-binding protein YlmH isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496076 PE=4 SV=1)

HSP 1 Score: 545 bits (1403), Expect = 3.70e-194
Identity = 286/317 (90.22%), Postives = 300/317 (94.64%), Query Frame = 0


Query: 4   TSIGALWSLRRAAQASSFRIPLALNLS---FHQARFPPSPSSPPGSSGICQLVQAVKGDI 63
           T+IGALWSLR A+Q SSFR PL +NL+   FH+ RFP   SSP G+SGICQLVQAVKGDI
Sbjct: 6   TTIGALWSLRIASQFSSFRRPLPVNLNRLYFHETRFP---SSPLGTSGICQLVQAVKGDI 65

Query: 64  DVLLNGVGDKGVIVDVKHILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVKAIA 123
           DVLLNGVGDKGVIVDVK ILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVKAIA
Sbjct: 66  DVLLNGVGDKGVIVDVKQILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVKAIA 125

Query: 124 QGGYPEAERCRISVGHADELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGIAREKL 183
           QGGYPEAERCRISVGH+DELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGIAREKL
Sbjct: 126 QGGYPEAERCRISVGHSDELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGIAREKL 185

Query: 184 GDIILQGENGAQVVLVPELVDFLISSLRKVGNVTVSCTRIPLTALDYEPPKTKTFNTIEA 243
           GDII+Q E GAQVV+VPELVDFLISSLRKVGNVTVSCTRIPLTAL+YEPPKTKTF TIEA
Sbjct: 186 GDIIIQEETGAQVVIVPELVDFLISSLRKVGNVTVSCTRIPLTALEYEPPKTKTFKTIEA 245

Query: 244 SLRVDAIASAGFKISRSKLVDLISSGDVRVNWTPVTKNGTTLKTGDVVSVSGKGRLKIGE 303
           SLRVDA+ASAGFKISRSKLVDLISSGDVRVNWTP+TKNGT LKTGD+VSVSGKGRLKIGE
Sbjct: 246 SLRVDALASAGFKISRSKLVDLISSGDVRVNWTPITKNGTILKTGDIVSVSGKGRLKIGE 305

Query: 304 INSTKKGKFSVELIRYV 317
           INSTKKGKF+VELIRYV
Sbjct: 306 INSTKKGKFAVELIRYV 319

[Close]

BLAST of MC10g0927 vs. TAIR 10
Match: AT1G53120.1 (RNA-binding S4 domain-containing protein )

HSP 1 Score: 405.6 bits (1041), Expect = 3.7e-113
Identity = 208/320 (65.00%), Postives = 253/320 (79.06%), Query Frame = 0


Query: 1   MAATSIGALWSLRRAA---QASSFRIPLALNLSFHQARFPPSPSSPPGSSGICQLVQAVK 60
           MA TS+   W + R A    A+S  +             P S      +   C   +A+K
Sbjct: 1   MAVTSLAPPWVILRLAFRSVAASSCLHTNQKTLITNLSIPTSFPLRQSALRRCYSAEAIK 60

Query: 61  GDIDVLLNGVGDKGVIVDVKHILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVK 120
           GD+D LL GVGD+ V  +VK IL MA+R+ S+REVLHT+FLTPP+VKES+  ++K ADVK
Sbjct: 61  GDVDFLLKGVGDQAVAKEVKQILEMARRASSKREVLHTDFLTPPIVKESVSLLEKFADVK 120

Query: 121 AIAQGGYPEAERCRISVGHADELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGIAR 180
            +AQGGYPEAERCRIS+GH D LTSDPDI++ALSITGNF F PCSHGDFLG+ILGTGI+R
Sbjct: 121 IVAQGGYPEAERCRISIGHPDVLTSDPDIVAALSITGNFGFQPCSHGDFLGAILGTGISR 180

Query: 181 EKLGDIILQGENGAQVVLVPELVDFLISSLRKVGNVTVSCTRIPLTALDYEPPKTKTFNT 240
           EKLGDI++Q E GAQV++VPELVDF++++L KVGNV V+C++IPL AL+YEPP+T +F T
Sbjct: 181 EKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEYEPPRTNSFKT 240

Query: 241 IEASLRVDAIASAGFKISRSKLVDLISSGDVRVNWTPVTKNGTTLKTGDVVSVSGKGRLK 300
           +EASLR+DA+ASAGFKISRSKLVDLISS DVRVNW  VTKNGT +KTGDVVSVSGKGRLK
Sbjct: 241 VEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDVVSVSGKGRLK 300

Query: 301 IGEINSTKKGKFSVELIRYV 318
           IGEIN TKKGKF+VE+IRY+
Sbjct: 301 IGEINETKKGKFAVEIIRYL 320

The following BLAST results are available for this feature:

BLAST of MC10g0927 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P71020	2.5e-18	30.22	Putative RNA-binding protein YlmH OS=Bacillus subtilis (strain 168) OX=224308 GN...	[more]

BLAST of MC10g0927 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022142743.1	5.10e-219	100.00	uncharacterized protein LOC111012786 isoform X1 [Momordica charantia]	[more]
XP_022142745.1	1.35e-216	99.68	uncharacterized protein LOC111012786 isoform X2 [Momordica charantia]	[more]
XP_038899605.1	3.17e-200	91.56	putative RNA-binding protein YlmH [Benincasa hispida]	[more]
XP_004146247.1	1.14e-195	91.82	uncharacterized protein LOC101221944 [Cucumis sativus] >XP_031738291.1 uncharact...	[more]
KAG6600381.1	1.27e-195	88.71	hypothetical protein SDJN03_05614, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of MC10g0927 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CP18	2.47e-219	100.00	uncharacterized protein LOC111012786 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1CLT4	6.54e-217	99.68	uncharacterized protein LOC111012786 isoform X2 OS=Momordica charantia OX=3673 G...	[more]
A0A0A0LC56	5.50e-196	91.82	S4 RNA-binding domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G233...	[more]
A0A6J1J103	5.04e-195	89.03	uncharacterized protein LOC111480897 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A1S3C3I2	3.70e-194	90.22	putative RNA-binding protein YlmH isoform X2 OS=Cucumis melo OX=3656 GN=LOC10349...	[more]

BLAST of MC10g0927 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G53120.1	3.7e-113	65.00	RNA-binding S4 domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002942	RNA-binding S4 domain	SMART	SM00363	s4_6	coord: 242..302 e-value: 9.0E-11 score: 51.8
IPR002942	RNA-binding S4 domain	PFAM	PF01479	S4	coord: 243..288 e-value: 1.4E-8 score: 34.3
IPR002942	RNA-binding S4 domain	CDD	cd00165	S4	coord: 243..297 e-value: 1.84816E-10 score: 54.1778
IPR036986	RNA-binding S4 domain superfamily	GENE3D	3.10.290.10		coord: 234..293 e-value: 3.4E-8 score: 34.8
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 143..225 e-value: 1.5E-21 score: 78.0
IPR040591	YlmH, putative RNA-binding domain	PFAM	PF17774	YlmH_RBD	coord: 148..223 e-value: 1.5E-13 score: 50.8
IPR017506	Photosystem II S4	TIGRFAM	TIGR03069	TIGR03069	coord: 75..315 e-value: 7.9E-95 score: 314.8
None	No IPR available	PANTHER	PTHR32219	RNA-BINDING PROTEIN YLMH-RELATED	coord: 48..317
None	No IPR available	PANTHER	PTHR32219:SF3	RNA-BINDING PROTEIN YLMH-RELATED	coord: 48..317
None	No IPR available	PROSITE	PS50889	S4	coord: 242..302 score: 13.58996
None	No IPR available	SUPERFAMILY	55174	Alpha-L RNA-binding motif	coord: 124..305

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC10g0927.1	MC10g0927.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding