MC10g0927 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC10g0927
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionS4 RNA-binding domain-containing protein
LocationMC10: 8014366 .. 8018546 (-)
RNA-Seq ExpressionMC10g0927
SyntenyMC10g0927
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5polypeptideCDSutr3
Hold the cursor over a type above to highlight its positions in the sequence below.
GCAGAAAATAATCAAGTTCGCGTACCACTAACAATGGCCGCTACGAGCATCGGAGCTCTGTGGAGTCTCAGAAGAGCAGCTCAAGCTTCGAGTTTCCGCATTCCCCTTGCCCTAAACCTCTCCTTCCACCAGGCCCGTTTTCCTCCTTCGCCGTCTTCTCCTCCGGGGTCGTCAGGTCTCGATTCCCTTTCTTCTCCATTGTTTCTTCTTCTACAATGCAAAATCCTCTGAATGCAATTACGAAACTATGAATTGTTATTGATTAGTAGGCGCATTTTTTCTCCAATTGCCCTGTGGTAGCTCACTAAGATCGAAATTGTAGAACAATTAGTTTTAGTTCGGGAGATAATAACCTTTGGATTGGGAATCAATTGGAAGTAAATTTCCATTTTTTTAAACTTATCTATGATTGCTTAAATTCCATTTTGAATTAATGGCATAAAGGGTGAGCATGATTGACGATTTCCATAATGTTCCTTGGTCTCTACTGCATCAAGTGCTTCTGCAGCGTATCTGCTTTTGTAGTTTTATTTTTACTCTAGGGTCTCATTCAATTGTGAAAGAGCACTTGAGCTTGCAGGTACCCAAGGGGTGCCTATGAGCTATGGGGTTCAAGCTTCCAAGTTAAAAACTTAATAATTTAAAGTCCACGTTGTCTCTTCGAGTCGGTCTTAATAGTGGCCAAAACTTCCCTAGAACGACATGAGTATAATGCAAGGAGTGAGACCTTTTGATACCTTAGATATCACAAAAAAAAAAACATAACAAATTATGAGCAACGTAACCTTCGTTTGGCAAAAAGTACTTCCTGCCTGTCTCCTACACCTATCAAATCCTTGAATTATTTCATTGTGGAAATGTAGTAAGAATGCAATTTATAACTCTAAAAATAATACATATTGTACGTGGAATGGGATAAAGGCTCATTTGTACTTCTTCTCGACACAGTCCTTTATGGTAACCCAAATATTGTTACTTAAATGATTCAATATTTGCATGTTAAGAGTCCACCCTATACTGTTTCAGGAATATGTCAATTAGTGCAAGCTGTAAAAGGAGACATTGATGTTTTACTCAACGGAGTAGGAGATAAAGGTGTTATTGTAGATGTGAAGCATATTCTTGTGATGGTATTGGTTATCAAAAGAAATCCTTCCTTTCCCTTCTAATTTGATGAATTTTGTATAAAAACAGCAATACGATAACCCTTTTGTCTCTTAGTTGTGAGGGATGATTCTGATTCTTCACTCTTTTGGTTTCATTTAGGCCAAACGTTCATTGTCAAGACGAGAAGTTCTCCATACGAACTTTCTCACCCCACCTGTGGTGAAAGAGTCAATGCTAGCTATACAAAAACTAGCTGACGTGAAAGCAATAGCTCAGGGAGGATACCCAGAGGTGAATATAAAAGTTTTGCTTCTCTCTTTTTTATTTTTTAAGTTGGGGCTTGGGTTTATGAATCTAAGACCTCTTGCTGATACCACACTTCTTTCAAGTTGACCAAATGTTTAGGCAGAGCGCTGCCGGATTTCTGTTGGGCATGCAGATGAACTAACAAGTGATCCAGACATAATTTCGGCATTGAGGTATCTTTCTTTAATCTTCTGCATTAATCCATTTTATCTTAGCTTTGGAAAAATCAGTTGTTCTTTTGTTCTTTCTTCTTCTTAATATAGTTTTCCTTCCCAGTATCACAGGAAATTTTACGTTTCACCCTTGCTCACACGGGGACTTCCTTGGATCAATTCTTGGTACAGGAATTGCTAGGGAAAAGCTTGGCGATATCATACTCCAGGTATCATTGCATTCAGTATTTACTTTGTATCCATTTGAAGTATAGTTACAACTGTCTGTTCTTATTCTTTGTGCACATTGCTACTTTCGGTTTCTTTTAAATGACTTGTGTTCTTTGTTTGAATTTGACTCATCAAGTATTATAAATGCATTACACTTTGGCTCTCTGCATTTGGTTCTATAATGAAAAAGTAGAATTATCTTTAACAAATCCCAAAAACGGATGGTAAAATTTGTGTTTCGGGTTATCATGCTCTGCCACCTGACTGTGTCCAGAACTTTGATCTGAAATGCTACTTCTTAAAATCTATGTTTCACTCCATCCACGTGGAACAAAACTTTATGAAAAAAATTAAGCTACAATGTCTAATTCCTTGCCTTGTCTATATGACTATATCCACAAGTACCTTTGTGTATATCTTTTAGATTTTTTATCCAAAGCAGCAACAAGGTTATCGTGAGCCATGTTTCTTTTATTCTCTTATTGTTACCATATTTTCAGGGAGAAAATGGAGCTCAAGTAGTACTTGTTCCAGAACTCGTCGACTTCCTTATATCGTCACTGCGCAAGGTAGTGTCATTGTCCTGGGTGATTGCTTCTAACACGATGACACAAAAATTAACACAAGAATGAAATATGTTCTTCCTCTGGGTGCATTTCTCGTGTGTTTAAACTATAAATACATATTTTGGTGAAGCCTACATAGCCTAATAGATACTCAAACTATTTGTATATTTGCTTCATTGATATCTTTATTTGTTATCTTTTTTTTTTTAAATGTAATTATTTGTTATGGCATTCTTAATTTCAGGTTGGTAATGTCACAGTTTCTTGTACGAGGATTCCGTTGACAGCTCTTGATTATGAACCACCAAAGTATGAAGTTATATCAGTGATTTTCATATTGGTTTCCATGTTTATTTTGATGTACTATTTTATTTTCTCCTTTGCAGGACTAAGACATTTAACACCATTGAGGCATCTCTTAGGGTGGATGCTATAGCAAGTGCTGGGTTCAAGATTTCACGGTCCAAACTAGTGGATTTAATCAGGTACAACGGCTTCTACTAACCAACTGATCTTTCACATTGCTATCATTTGTAGAATAGAATGAGTCAATCATGAACTTTGGTATCTTATTGAAAAAATGGTGATGTTTCTCCATTGATCAAGTATTTCAATTTTTAGGAAATATCATGATCATCCAAGAAGAAGGGTTTCAATTTTTTTTTTCAAATGAATGATTCGAAGAATATTTTCTAAGTTTCTACCCTGAAAAATAAAGGAATAATTTATAACAATTTTTGGTTTTTGTGTTGTTGATTCCTAAGCATAGTGTTTCCTCTCCTCTACTGCCTATTTTAGTGGAGCATAGTTGTCTTAATCATCGGTTACACCTTTTGCTCAATATTAAAATGGGCAATTAAAACATATGAAGTTACATTAAACTGGGTATACACAACAAACTCTCATAATAATGTAATGCTTTGCTTATATTCTTTGTTGAATTACGGCATCGAAGTATTTGTAAGTGGTTAAAACGTGCCATCATATGGTAGTGAATGATAATAGATAACTTTCTCAAAGTTTCTGGGGAATAGGGTGTAGCAATGTATTATCTTCCATTTCTTTTGTGAAAGTACATGAACCTGAAATTGTTATATGAGCAGCAGTGGTGATGTTCGTGTCAATTGGACACCGGTTACAAAAAATGGAACCACACTGAAGACTGGTGATGTTGTTTCTGTTAGTGGTAAAGGCAGACTAAAGGTGAGCTTTTCAGCTCAATGGAAACTGAAACTAGTTGCACCGAGTTTATATATTTGCTAACTTAGCATTCCTGACTTCTGGTTATTTTCCTCATATTCAGATTGGAGAAATAAATTCTACGAAAAAAGGGAAATTTTCTGTTGAGCTTATCAGGTACGTGTAAGCTCTGGCGTTATTGGATCGTTTCGAGTTGAACCAAGTAAGATATCAGTAGCAAAAGCTCCCTCATGAACATCATGATTCCTTCTTTGGGAAGAAGGAAGGTAAGTCACTGTTCAACATGACACGAACCTGATTGTACATAAAATCTGAACATCCATTCATCCATTCTTAAAAATTTTGCATTTGGAAAATTTATCTCTTCACATTTCTATGCCGGGAAATATTGGTTCTTTTGTCTTTGGGATGTGTGATTTTATGTCCCTGGAATGGAATTTATTATGCAAATTAATGTTGTCAAAGGGAGGGAATGTAAATACAAAAGTTATAGCTTCGCAGTAACTATTTGTAGATCCAATGATATTTGACCTATTTCCATCCCGTAATATGCAGTTATTAATGTATATTGGTTGGTGTACAACTATCAATTTTTGTTAATTACTGATTTAGTTTTCAA

mRNA sequence

GCAGAAAATAATCAAGTTCGCGTACCACTAACAATGGCCGCTACGAGCATCGGAGCTCTGTGGAGTCTCAGAAGAGCAGCTCAAGCTTCGAGTTTCCGCATTCCCCTTGCCCTAAACCTCTCCTTCCACCAGGCCCGTTTTCCTCCTTCGCCGTCTTCTCCTCCGGGGTCGTCAGGAATATGTCAATTAGTGCAAGCTGTAAAAGGAGACATTGATGTTTTACTCAACGGAGTAGGAGATAAAGGTGTTATTGTAGATGTGAAGCATATTCTTGTGATGGCCAAACGTTCATTGTCAAGACGAGAAGTTCTCCATACGAACTTTCTCACCCCACCTGTGGTGAAAGAGTCAATGCTAGCTATACAAAAACTAGCTGACGTGAAAGCAATAGCTCAGGGAGGATACCCAGAGGCAGAGCGCTGCCGGATTTCTGTTGGGCATGCAGATGAACTAACAAGTGATCCAGACATAATTTCGGCATTGAGTATCACAGGAAATTTTACGTTTCACCCTTGCTCACACGGGGACTTCCTTGGATCAATTCTTGGTACAGGAATTGCTAGGGAAAAGCTTGGCGATATCATACTCCAGGGAGAAAATGGAGCTCAAGTAGTACTTGTTCCAGAACTCGTCGACTTCCTTATATCGTCACTGCGCAAGGTTGGTAATGTCACAGTTTCTTGTACGAGGATTCCGTTGACAGCTCTTGATTATGAACCACCAAAGACTAAGACATTTAACACCATTGAGGCATCTCTTAGGGTGGATGCTATAGCAAGTGCTGGGTTCAAGATTTCACGGTCCAAACTAGTGGATTTAATCAGCAGTGGTGATGTTCGTGTCAATTGGACACCGGTTACAAAAAATGGAACCACACTGAAGACTGGTGATGTTGTTTCTGTTAGTGGTAAAGGCAGACTAAAGATTGGAGAAATAAATTCTACGAAAAAAGGGAAATTTTCTGTTGAGCTTATCAGGTACGTGTAAGCTCTGGCGTTATTGGATCGTTTCGAGTTGAACCAAGTAAGATATCAGTAGCAAAAGCTCCCTCATGAACATCATGATTCCTTCTTTGGGAAGAAGGAAGGTAAGTCACTGTTCAACATGACACGAACCTGATTGTACATAAAATCTGAACATCCATTCATCCATTCTTAAAAATTTTGCATTTGGAAAATTTATCTCTTCACATTTCTATGCCGGGAAATATTGGTTCTTTTGTCTTTGGGATGTGTGATTTTATGTCCCTGGAATGGAATTTATTATGCAAATTAATGTTGTCAAAGGGAGGGAATGTAAATACAAAAGTTATAGCTTCGCAGTAACTATTTGTAGATCCAATGATATTTGACCTATTTCCATCCCGTAATATGCAGTTATTAATGTATATTGGTTGGTGTACAACTATCAATTTTTGTTAATTACTGATTTAGTTTTCAA

Coding sequence (CDS)

ATGGCCGCTACGAGCATCGGAGCTCTGTGGAGTCTCAGAAGAGCAGCTCAAGCTTCGAGTTTCCGCATTCCCCTTGCCCTAAACCTCTCCTTCCACCAGGCCCGTTTTCCTCCTTCGCCGTCTTCTCCTCCGGGGTCGTCAGGAATATGTCAATTAGTGCAAGCTGTAAAAGGAGACATTGATGTTTTACTCAACGGAGTAGGAGATAAAGGTGTTATTGTAGATGTGAAGCATATTCTTGTGATGGCCAAACGTTCATTGTCAAGACGAGAAGTTCTCCATACGAACTTTCTCACCCCACCTGTGGTGAAAGAGTCAATGCTAGCTATACAAAAACTAGCTGACGTGAAAGCAATAGCTCAGGGAGGATACCCAGAGGCAGAGCGCTGCCGGATTTCTGTTGGGCATGCAGATGAACTAACAAGTGATCCAGACATAATTTCGGCATTGAGTATCACAGGAAATTTTACGTTTCACCCTTGCTCACACGGGGACTTCCTTGGATCAATTCTTGGTACAGGAATTGCTAGGGAAAAGCTTGGCGATATCATACTCCAGGGAGAAAATGGAGCTCAAGTAGTACTTGTTCCAGAACTCGTCGACTTCCTTATATCGTCACTGCGCAAGGTTGGTAATGTCACAGTTTCTTGTACGAGGATTCCGTTGACAGCTCTTGATTATGAACCACCAAAGACTAAGACATTTAACACCATTGAGGCATCTCTTAGGGTGGATGCTATAGCAAGTGCTGGGTTCAAGATTTCACGGTCCAAACTAGTGGATTTAATCAGCAGTGGTGATGTTCGTGTCAATTGGACACCGGTTACAAAAAATGGAACCACACTGAAGACTGGTGATGTTGTTTCTGTTAGTGGTAAAGGCAGACTAAAGATTGGAGAAATAAATTCTACGAAAAAAGGGAAATTTTCTGTTGAGCTTATCAGGTACGTGTAA

Protein sequence

MAATSIGALWSLRRAAQASSFRIPLALNLSFHQARFPPSPSSPPGSSGICQLVQAVKGDIDVLLNGVGDKGVIVDVKHILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVKAIAQGGYPEAERCRISVGHADELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGIAREKLGDIILQGENGAQVVLVPELVDFLISSLRKVGNVTVSCTRIPLTALDYEPPKTKTFNTIEASLRVDAIASAGFKISRSKLVDLISSGDVRVNWTPVTKNGTTLKTGDVVSVSGKGRLKIGEINSTKKGKFSVELIRYV
Homology
BLAST of MC10g0927 vs. ExPASy Swiss-Prot
Match: P71020 (Putative RNA-binding protein YlmH OS=Bacillus subtilis (strain 168) OX=224308 GN=ylmH PE=4 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 2.5e-18
Identity = 68/225 (30.22%), Postives = 112/225 (49.78%), Query Frame = 0

Query: 95  TNFLTPPVVKESML--AIQKLADVKAIAQGGYPEAERCRISVGHADELTSDPDI-ISALS 154
           T+FL P   +E ++  A+   ADV     GGY  AER R  +        + D  + A +
Sbjct: 35  TDFLDP---REQVILSAVTGQADVGLAFSGGYDRAERKRAILFPEYITPEESDFELQAFN 94

Query: 155 ITGNFTFHPCSHGDFLGSILGTGIAREKLGDIILQGENGAQVVLVPELVDFLISSLRKVG 214
           +     F    H   LG+++G G+ R+K GDI+   E   Q+++  +  DF+ + L + G
Sbjct: 95  VRYADKFVSVDHRSLLGALMGIGLKRQKFGDIVF-SETAVQLIVSADTADFVAAQLTQAG 154

Query: 215 NVTVSCTRIPLTALDYEPPKTKTFNTIEASLRVDAIASAGFKISRSKLVDLISSGDVRVN 274
              VS  +I L+ L+      +  +   +SLR+DA+ ++  + SR K   L+ +G V+VN
Sbjct: 155 KAAVSLEKIDLSDLNIPAVDVEIRDDTVSSLRLDAVCASMSRQSRQKSQTLVKNGLVKVN 214

Query: 275 WTPVTKNGTTLKTGDVVSVSGKGRLKIGEI-NSTKKGKFSVELIR 316
           W  V      +  GD++S+ G GR  + +I   TKK K+ V   R
Sbjct: 215 WKVVEDPSYIVAEGDMLSIRGFGRCSLTKIEGKTKKDKWRVTFER 255

BLAST of MC10g0927 vs. NCBI nr
Match: XP_022142743.1 (uncharacterized protein LOC111012786 isoform X1 [Momordica charantia])

HSP 1 Score: 608 bits (1568), Expect = 5.10e-219
Identity = 317/317 (100.00%), Postives = 317/317 (100.00%), Query Frame = 0

Query: 1   MAATSIGALWSLRRAAQASSFRIPLALNLSFHQARFPPSPSSPPGSSGICQLVQAVKGDI 60
           MAATSIGALWSLRRAAQASSFRIPLALNLSFHQARFPPSPSSPPGSSGICQLVQAVKGDI
Sbjct: 1   MAATSIGALWSLRRAAQASSFRIPLALNLSFHQARFPPSPSSPPGSSGICQLVQAVKGDI 60

Query: 61  DVLLNGVGDKGVIVDVKHILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVKAIA 120
           DVLLNGVGDKGVIVDVKHILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVKAIA
Sbjct: 61  DVLLNGVGDKGVIVDVKHILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVKAIA 120

Query: 121 QGGYPEAERCRISVGHADELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGIAREKL 180
           QGGYPEAERCRISVGHADELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGIAREKL
Sbjct: 121 QGGYPEAERCRISVGHADELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGIAREKL 180

Query: 181 GDIILQGENGAQVVLVPELVDFLISSLRKVGNVTVSCTRIPLTALDYEPPKTKTFNTIEA 240
           GDIILQGENGAQVVLVPELVDFLISSLRKVGNVTVSCTRIPLTALDYEPPKTKTFNTIEA
Sbjct: 181 GDIILQGENGAQVVLVPELVDFLISSLRKVGNVTVSCTRIPLTALDYEPPKTKTFNTIEA 240

Query: 241 SLRVDAIASAGFKISRSKLVDLISSGDVRVNWTPVTKNGTTLKTGDVVSVSGKGRLKIGE 300
           SLRVDAIASAGFKISRSKLVDLISSGDVRVNWTPVTKNGTTLKTGDVVSVSGKGRLKIGE
Sbjct: 241 SLRVDAIASAGFKISRSKLVDLISSGDVRVNWTPVTKNGTTLKTGDVVSVSGKGRLKIGE 300

Query: 301 INSTKKGKFSVELIRYV 317
           INSTKKGKFSVELIRYV
Sbjct: 301 INSTKKGKFSVELIRYV 317

BLAST of MC10g0927 vs. NCBI nr
Match: XP_022142745.1 (uncharacterized protein LOC111012786 isoform X2 [Momordica charantia])

HSP 1 Score: 602 bits (1552), Expect = 1.35e-216
Identity = 316/317 (99.68%), Postives = 316/317 (99.68%), Query Frame = 0

Query: 1   MAATSIGALWSLRRAAQASSFRIPLALNLSFHQARFPPSPSSPPGSSGICQLVQAVKGDI 60
           MAATSIGALWSLRRAAQASSFRIPLALNLSFHQARFPPSPSSPPGSSGICQLVQAVKGDI
Sbjct: 1   MAATSIGALWSLRRAAQASSFRIPLALNLSFHQARFPPSPSSPPGSSGICQLVQAVKGDI 60

Query: 61  DVLLNGVGDKGVIVDVKHILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVKAIA 120
           DVLLNGVGDKGVIVDVKHILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVKAIA
Sbjct: 61  DVLLNGVGDKGVIVDVKHILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVKAIA 120

Query: 121 QGGYPEAERCRISVGHADELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGIAREKL 180
           QGGYPEAERCRISVGHADELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGIAREKL
Sbjct: 121 QGGYPEAERCRISVGHADELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGIAREKL 180

Query: 181 GDIILQGENGAQVVLVPELVDFLISSLRKVGNVTVSCTRIPLTALDYEPPKTKTFNTIEA 240
           GDIILQGENGAQVVLVPELVDFLISSLRKVGNVTVSCTRIPLTALDYEPPKTKTFNTIEA
Sbjct: 181 GDIILQGENGAQVVLVPELVDFLISSLRKVGNVTVSCTRIPLTALDYEPPKTKTFNTIEA 240

Query: 241 SLRVDAIASAGFKISRSKLVDLISSGDVRVNWTPVTKNGTTLKTGDVVSVSGKGRLKIGE 300
           SLRVDAIASAGFKISRSKLVDLIS GDVRVNWTPVTKNGTTLKTGDVVSVSGKGRLKIGE
Sbjct: 241 SLRVDAIASAGFKISRSKLVDLIS-GDVRVNWTPVTKNGTTLKTGDVVSVSGKGRLKIGE 300

Query: 301 INSTKKGKFSVELIRYV 317
           INSTKKGKFSVELIRYV
Sbjct: 301 INSTKKGKFSVELIRYV 316

BLAST of MC10g0927 vs. NCBI nr
Match: XP_038899605.1 (putative RNA-binding protein YlmH [Benincasa hispida])

HSP 1 Score: 561 bits (1445), Expect = 3.17e-200
Identity = 293/320 (91.56%), Postives = 305/320 (95.31%), Query Frame = 0

Query: 1   MAATSIGALWSLRRAAQASSFRIPLALNL---SFHQARFPPSPSSPPGSSGICQLVQAVK 60
           MAATSIGA WSLRRAAQ+SSFR PLA+NL   SFH+ARFP SPSSP GSSGICQLVQAVK
Sbjct: 1   MAATSIGARWSLRRAAQSSSFRSPLAVNLNKLSFHEARFPSSPSSPLGSSGICQLVQAVK 60

Query: 61  GDIDVLLNGVGDKGVIVDVKHILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVK 120
           GDIDVLLNGVGDKGVIVDVKHILVMAKRSLSRR VLHTNFLTPPVVKES+LA+QKLADVK
Sbjct: 61  GDIDVLLNGVGDKGVIVDVKHILVMAKRSLSRRVVLHTNFLTPPVVKESILALQKLADVK 120

Query: 121 AIAQGGYPEAERCRISVGHADELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGIAR 180
           AIAQGGYPEAERCRISVGHADEL SDPDI+SALSITGNF FHPCSHGDFLG+ILGTGIAR
Sbjct: 121 AIAQGGYPEAERCRISVGHADELLSDPDIVSALSITGNFMFHPCSHGDFLGAILGTGIAR 180

Query: 181 EKLGDIILQGENGAQVVLVPELVDFLISSLRKVGNVTVSCTRIPLTALDYEPPKTKTFNT 240
           EKLGDIILQ E GAQVV+VPELVDFL SSLRKVGNVTVSCTRIPLTALDYEPPKTKTF T
Sbjct: 181 EKLGDIILQEEKGAQVVVVPELVDFLASSLRKVGNVTVSCTRIPLTALDYEPPKTKTFKT 240

Query: 241 IEASLRVDAIASAGFKISRSKLVDLISSGDVRVNWTPVTKNGTTLKTGDVVSVSGKGRLK 300
           IEASLRVDA+ASAGFKISRSKLVDLISSGDVRVNWTP+TKNGT LKTGD+VSVSGKGRLK
Sbjct: 241 IEASLRVDALASAGFKISRSKLVDLISSGDVRVNWTPITKNGTILKTGDIVSVSGKGRLK 300

Query: 301 IGEINSTKKGKFSVELIRYV 317
           IGEINSTKKGKF+VELIRYV
Sbjct: 301 IGEINSTKKGKFAVELIRYV 320

BLAST of MC10g0927 vs. NCBI nr
Match: XP_004146247.1 (uncharacterized protein LOC101221944 [Cucumis sativus] >XP_031738291.1 uncharacterized protein LOC101221944 [Cucumis sativus] >KGN57626.1 hypothetical protein Csa_011390 [Cucumis sativus])

HSP 1 Score: 549 bits (1415), Expect = 1.14e-195
Identity = 292/318 (91.82%), Postives = 302/318 (94.97%), Query Frame = 0

Query: 3   ATSIGALWSLRRAAQASSFRIPLALNLS---FHQARFPPSPSSPPGSSGICQLVQAVKGD 62
           ATSI ALWSLRRAAQ SSFR PLALNL+   F++ARFP   SSP G+SGICQLVQAVKGD
Sbjct: 5   ATSIAALWSLRRAAQFSSFRRPLALNLNRLCFNEARFP---SSPLGTSGICQLVQAVKGD 64

Query: 63  IDVLLNGVGDKGVIVDVKHILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVKAI 122
           IDVLLNGVGDKGVIVDVK ILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVKAI
Sbjct: 65  IDVLLNGVGDKGVIVDVKQILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVKAI 124

Query: 123 AQGGYPEAERCRISVGHADELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGIAREK 182
           AQGGYPEAERCRISVGHADELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGIAREK
Sbjct: 125 AQGGYPEAERCRISVGHADELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGIAREK 184

Query: 183 LGDIILQGENGAQVVLVPELVDFLISSLRKVGNVTVSCTRIPLTALDYEPPKTKTFNTIE 242
           LGDI+LQ E GAQVV+VPELVDFLISSLRKVGNVTVSCTRIPLTAL+YEPPKTKTF TIE
Sbjct: 185 LGDIMLQEETGAQVVIVPELVDFLISSLRKVGNVTVSCTRIPLTALEYEPPKTKTFKTIE 244

Query: 243 ASLRVDAIASAGFKISRSKLVDLISSGDVRVNWTPVTKNGTTLKTGDVVSVSGKGRLKIG 302
           ASLRVDAIASAGFKISRSKLVDLISSGDVRVNWT +TKNGT LKTGD+VSVSGKGRLKIG
Sbjct: 245 ASLRVDAIASAGFKISRSKLVDLISSGDVRVNWTSITKNGTILKTGDIVSVSGKGRLKIG 304

Query: 303 EINSTKKGKFSVELIRYV 317
           EINSTKKGKF+VELIRYV
Sbjct: 305 EINSTKKGKFAVELIRYV 319

BLAST of MC10g0927 vs. NCBI nr
Match: KAG6600381.1 (hypothetical protein SDJN03_05614, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031043.1 ylmH [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 549 bits (1415), Expect = 1.27e-195
Identity = 283/319 (88.71%), Postives = 300/319 (94.04%), Query Frame = 0

Query: 2   AATSIGALWSLRRAAQASSFRIPLALNL---SFHQARFPPSPSSPPGSSGICQLVQAVKG 61
           A  SIGALWSLRRAAQ+SSFR PLA+NL   SFH+ARFP SPSSP G+SG+CQLVQAVKG
Sbjct: 4   ATASIGALWSLRRAAQSSSFRTPLAINLGKVSFHEARFPSSPSSPLGASGMCQLVQAVKG 63

Query: 62  DIDVLLNGVGDKGVIVDVKHILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVKA 121
           DIDVLLNGVGDKGVIVDVKHILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVKA
Sbjct: 64  DIDVLLNGVGDKGVIVDVKHILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVKA 123

Query: 122 IAQGGYPEAERCRISVGHADELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGIARE 181
           IAQGGYPEAERCRISVGHADELTSDPD++SALSITGNF FH C+HGDFLG+ILGTGIARE
Sbjct: 124 IAQGGYPEAERCRISVGHADELTSDPDVVSALSITGNFVFHTCTHGDFLGAILGTGIARE 183

Query: 182 KLGDIILQGENGAQVVLVPELVDFLISSLRKVGNVTVSCTRIPLTALDYEPPKTKTFNTI 241
           KLGDIILQ E GAQVV+VPELVDFL+SSLRKVGNVTVSCTRIPLT LDYEPPKTKTF TI
Sbjct: 184 KLGDIILQEEKGAQVVIVPELVDFLVSSLRKVGNVTVSCTRIPLTDLDYEPPKTKTFKTI 243

Query: 242 EASLRVDAIASAGFKISRSKLVDLISSGDVRVNWTPVTKNGTTLKTGDVVSVSGKGRLKI 301
           EASLRVDA+ASAGFKISRSKLVD IS GDVRVNWT +TKNGT LKTGD+VSVSGKGRLKI
Sbjct: 244 EASLRVDALASAGFKISRSKLVDFISGGDVRVNWTTITKNGTILKTGDIVSVSGKGRLKI 303

Query: 302 GEINSTKKGKFSVELIRYV 317
           GEIN TKKGKF++ELI+YV
Sbjct: 304 GEINPTKKGKFAIELIKYV 322

BLAST of MC10g0927 vs. ExPASy TrEMBL
Match: A0A6J1CP18 (uncharacterized protein LOC111012786 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111012786 PE=4 SV=1)

HSP 1 Score: 608 bits (1568), Expect = 2.47e-219
Identity = 317/317 (100.00%), Postives = 317/317 (100.00%), Query Frame = 0

Query: 1   MAATSIGALWSLRRAAQASSFRIPLALNLSFHQARFPPSPSSPPGSSGICQLVQAVKGDI 60
           MAATSIGALWSLRRAAQASSFRIPLALNLSFHQARFPPSPSSPPGSSGICQLVQAVKGDI
Sbjct: 1   MAATSIGALWSLRRAAQASSFRIPLALNLSFHQARFPPSPSSPPGSSGICQLVQAVKGDI 60

Query: 61  DVLLNGVGDKGVIVDVKHILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVKAIA 120
           DVLLNGVGDKGVIVDVKHILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVKAIA
Sbjct: 61  DVLLNGVGDKGVIVDVKHILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVKAIA 120

Query: 121 QGGYPEAERCRISVGHADELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGIAREKL 180
           QGGYPEAERCRISVGHADELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGIAREKL
Sbjct: 121 QGGYPEAERCRISVGHADELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGIAREKL 180

Query: 181 GDIILQGENGAQVVLVPELVDFLISSLRKVGNVTVSCTRIPLTALDYEPPKTKTFNTIEA 240
           GDIILQGENGAQVVLVPELVDFLISSLRKVGNVTVSCTRIPLTALDYEPPKTKTFNTIEA
Sbjct: 181 GDIILQGENGAQVVLVPELVDFLISSLRKVGNVTVSCTRIPLTALDYEPPKTKTFNTIEA 240

Query: 241 SLRVDAIASAGFKISRSKLVDLISSGDVRVNWTPVTKNGTTLKTGDVVSVSGKGRLKIGE 300
           SLRVDAIASAGFKISRSKLVDLISSGDVRVNWTPVTKNGTTLKTGDVVSVSGKGRLKIGE
Sbjct: 241 SLRVDAIASAGFKISRSKLVDLISSGDVRVNWTPVTKNGTTLKTGDVVSVSGKGRLKIGE 300

Query: 301 INSTKKGKFSVELIRYV 317
           INSTKKGKFSVELIRYV
Sbjct: 301 INSTKKGKFSVELIRYV 317

BLAST of MC10g0927 vs. ExPASy TrEMBL
Match: A0A6J1CLT4 (uncharacterized protein LOC111012786 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111012786 PE=4 SV=1)

HSP 1 Score: 602 bits (1552), Expect = 6.54e-217
Identity = 316/317 (99.68%), Postives = 316/317 (99.68%), Query Frame = 0

Query: 1   MAATSIGALWSLRRAAQASSFRIPLALNLSFHQARFPPSPSSPPGSSGICQLVQAVKGDI 60
           MAATSIGALWSLRRAAQASSFRIPLALNLSFHQARFPPSPSSPPGSSGICQLVQAVKGDI
Sbjct: 1   MAATSIGALWSLRRAAQASSFRIPLALNLSFHQARFPPSPSSPPGSSGICQLVQAVKGDI 60

Query: 61  DVLLNGVGDKGVIVDVKHILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVKAIA 120
           DVLLNGVGDKGVIVDVKHILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVKAIA
Sbjct: 61  DVLLNGVGDKGVIVDVKHILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVKAIA 120

Query: 121 QGGYPEAERCRISVGHADELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGIAREKL 180
           QGGYPEAERCRISVGHADELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGIAREKL
Sbjct: 121 QGGYPEAERCRISVGHADELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGIAREKL 180

Query: 181 GDIILQGENGAQVVLVPELVDFLISSLRKVGNVTVSCTRIPLTALDYEPPKTKTFNTIEA 240
           GDIILQGENGAQVVLVPELVDFLISSLRKVGNVTVSCTRIPLTALDYEPPKTKTFNTIEA
Sbjct: 181 GDIILQGENGAQVVLVPELVDFLISSLRKVGNVTVSCTRIPLTALDYEPPKTKTFNTIEA 240

Query: 241 SLRVDAIASAGFKISRSKLVDLISSGDVRVNWTPVTKNGTTLKTGDVVSVSGKGRLKIGE 300
           SLRVDAIASAGFKISRSKLVDLIS GDVRVNWTPVTKNGTTLKTGDVVSVSGKGRLKIGE
Sbjct: 241 SLRVDAIASAGFKISRSKLVDLIS-GDVRVNWTPVTKNGTTLKTGDVVSVSGKGRLKIGE 300

Query: 301 INSTKKGKFSVELIRYV 317
           INSTKKGKFSVELIRYV
Sbjct: 301 INSTKKGKFSVELIRYV 316

BLAST of MC10g0927 vs. ExPASy TrEMBL
Match: A0A0A0LC56 (S4 RNA-binding domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G233470 PE=4 SV=1)

HSP 1 Score: 549 bits (1415), Expect = 5.50e-196
Identity = 292/318 (91.82%), Postives = 302/318 (94.97%), Query Frame = 0

Query: 3   ATSIGALWSLRRAAQASSFRIPLALNLS---FHQARFPPSPSSPPGSSGICQLVQAVKGD 62
           ATSI ALWSLRRAAQ SSFR PLALNL+   F++ARFP   SSP G+SGICQLVQAVKGD
Sbjct: 5   ATSIAALWSLRRAAQFSSFRRPLALNLNRLCFNEARFP---SSPLGTSGICQLVQAVKGD 64

Query: 63  IDVLLNGVGDKGVIVDVKHILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVKAI 122
           IDVLLNGVGDKGVIVDVK ILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVKAI
Sbjct: 65  IDVLLNGVGDKGVIVDVKQILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVKAI 124

Query: 123 AQGGYPEAERCRISVGHADELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGIAREK 182
           AQGGYPEAERCRISVGHADELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGIAREK
Sbjct: 125 AQGGYPEAERCRISVGHADELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGIAREK 184

Query: 183 LGDIILQGENGAQVVLVPELVDFLISSLRKVGNVTVSCTRIPLTALDYEPPKTKTFNTIE 242
           LGDI+LQ E GAQVV+VPELVDFLISSLRKVGNVTVSCTRIPLTAL+YEPPKTKTF TIE
Sbjct: 185 LGDIMLQEETGAQVVIVPELVDFLISSLRKVGNVTVSCTRIPLTALEYEPPKTKTFKTIE 244

Query: 243 ASLRVDAIASAGFKISRSKLVDLISSGDVRVNWTPVTKNGTTLKTGDVVSVSGKGRLKIG 302
           ASLRVDAIASAGFKISRSKLVDLISSGDVRVNWT +TKNGT LKTGD+VSVSGKGRLKIG
Sbjct: 245 ASLRVDAIASAGFKISRSKLVDLISSGDVRVNWTSITKNGTILKTGDIVSVSGKGRLKIG 304

Query: 303 EINSTKKGKFSVELIRYV 317
           EINSTKKGKF+VELIRYV
Sbjct: 305 EINSTKKGKFAVELIRYV 319

BLAST of MC10g0927 vs. ExPASy TrEMBL
Match: A0A6J1J103 (uncharacterized protein LOC111480897 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111480897 PE=4 SV=1)

HSP 1 Score: 547 bits (1409), Expect = 5.04e-195
Identity = 284/319 (89.03%), Postives = 299/319 (93.73%), Query Frame = 0

Query: 2   AATSIGALWSLRRAAQASSFRIPLALNLS---FHQARFPPSPSSPPGSSGICQLVQAVKG 61
           A  SIGALWSLRRAAQ+SS R PLA+NLS   FH+ARFP SPSSP GSSG+CQLVQAVKG
Sbjct: 4   ATASIGALWSLRRAAQSSSLRTPLAVNLSKVSFHEARFPTSPSSPLGSSGMCQLVQAVKG 63

Query: 62  DIDVLLNGVGDKGVIVDVKHILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVKA 121
           DIDVLLNGVGDKGVIVDVKHILVMAKRSLSRREVLHTNFLTPPVVKESMLAI+KLADVKA
Sbjct: 64  DIDVLLNGVGDKGVIVDVKHILVMAKRSLSRREVLHTNFLTPPVVKESMLAIKKLADVKA 123

Query: 122 IAQGGYPEAERCRISVGHADELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGIARE 181
           IAQGGYPEAERCRISVGHADELTSDPD++SALSITGNF FH C+HGDFLG+ILGTGIARE
Sbjct: 124 IAQGGYPEAERCRISVGHADELTSDPDVVSALSITGNFMFHTCTHGDFLGAILGTGIARE 183

Query: 182 KLGDIILQGENGAQVVLVPELVDFLISSLRKVGNVTVSCTRIPLTALDYEPPKTKTFNTI 241
           KLGDIILQ E GAQVV+VPELVDFL+SSL KVGNVTVSCTRIPLT LDYEPPKTKTF TI
Sbjct: 184 KLGDIILQEEKGAQVVIVPELVDFLVSSLHKVGNVTVSCTRIPLTDLDYEPPKTKTFKTI 243

Query: 242 EASLRVDAIASAGFKISRSKLVDLISSGDVRVNWTPVTKNGTTLKTGDVVSVSGKGRLKI 301
           EASLRVDA+ASAGFKISRSKLVD ISSGDVRVNWT +TKNGT LKTGD+VSVSGKGRLKI
Sbjct: 244 EASLRVDALASAGFKISRSKLVDFISSGDVRVNWTTITKNGTILKTGDIVSVSGKGRLKI 303

Query: 302 GEINSTKKGKFSVELIRYV 317
           GEIN TKKGKF+VELIRYV
Sbjct: 304 GEINPTKKGKFAVELIRYV 322

BLAST of MC10g0927 vs. ExPASy TrEMBL
Match: A0A1S3C3I2 (putative RNA-binding protein YlmH isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496076 PE=4 SV=1)

HSP 1 Score: 545 bits (1403), Expect = 3.70e-194
Identity = 286/317 (90.22%), Postives = 300/317 (94.64%), Query Frame = 0

Query: 4   TSIGALWSLRRAAQASSFRIPLALNLS---FHQARFPPSPSSPPGSSGICQLVQAVKGDI 63
           T+IGALWSLR A+Q SSFR PL +NL+   FH+ RFP   SSP G+SGICQLVQAVKGDI
Sbjct: 6   TTIGALWSLRIASQFSSFRRPLPVNLNRLYFHETRFP---SSPLGTSGICQLVQAVKGDI 65

Query: 64  DVLLNGVGDKGVIVDVKHILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVKAIA 123
           DVLLNGVGDKGVIVDVK ILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVKAIA
Sbjct: 66  DVLLNGVGDKGVIVDVKQILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVKAIA 125

Query: 124 QGGYPEAERCRISVGHADELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGIAREKL 183
           QGGYPEAERCRISVGH+DELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGIAREKL
Sbjct: 126 QGGYPEAERCRISVGHSDELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGIAREKL 185

Query: 184 GDIILQGENGAQVVLVPELVDFLISSLRKVGNVTVSCTRIPLTALDYEPPKTKTFNTIEA 243
           GDII+Q E GAQVV+VPELVDFLISSLRKVGNVTVSCTRIPLTAL+YEPPKTKTF TIEA
Sbjct: 186 GDIIIQEETGAQVVIVPELVDFLISSLRKVGNVTVSCTRIPLTALEYEPPKTKTFKTIEA 245

Query: 244 SLRVDAIASAGFKISRSKLVDLISSGDVRVNWTPVTKNGTTLKTGDVVSVSGKGRLKIGE 303
           SLRVDA+ASAGFKISRSKLVDLISSGDVRVNWTP+TKNGT LKTGD+VSVSGKGRLKIGE
Sbjct: 246 SLRVDALASAGFKISRSKLVDLISSGDVRVNWTPITKNGTILKTGDIVSVSGKGRLKIGE 305

Query: 304 INSTKKGKFSVELIRYV 317
           INSTKKGKF+VELIRYV
Sbjct: 306 INSTKKGKFAVELIRYV 319

BLAST of MC10g0927 vs. TAIR 10
Match: AT1G53120.1 (RNA-binding S4 domain-containing protein )

HSP 1 Score: 405.6 bits (1041), Expect = 3.7e-113
Identity = 208/320 (65.00%), Postives = 253/320 (79.06%), Query Frame = 0

Query: 1   MAATSIGALWSLRRAA---QASSFRIPLALNLSFHQARFPPSPSSPPGSSGICQLVQAVK 60
           MA TS+   W + R A    A+S  +             P S      +   C   +A+K
Sbjct: 1   MAVTSLAPPWVILRLAFRSVAASSCLHTNQKTLITNLSIPTSFPLRQSALRRCYSAEAIK 60

Query: 61  GDIDVLLNGVGDKGVIVDVKHILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVK 120
           GD+D LL GVGD+ V  +VK IL MA+R+ S+REVLHT+FLTPP+VKES+  ++K ADVK
Sbjct: 61  GDVDFLLKGVGDQAVAKEVKQILEMARRASSKREVLHTDFLTPPIVKESVSLLEKFADVK 120

Query: 121 AIAQGGYPEAERCRISVGHADELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGIAR 180
            +AQGGYPEAERCRIS+GH D LTSDPDI++ALSITGNF F PCSHGDFLG+ILGTGI+R
Sbjct: 121 IVAQGGYPEAERCRISIGHPDVLTSDPDIVAALSITGNFGFQPCSHGDFLGAILGTGISR 180

Query: 181 EKLGDIILQGENGAQVVLVPELVDFLISSLRKVGNVTVSCTRIPLTALDYEPPKTKTFNT 240
           EKLGDI++Q E GAQV++VPELVDF++++L KVGNV V+C++IPL AL+YEPP+T +F T
Sbjct: 181 EKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEYEPPRTNSFKT 240

Query: 241 IEASLRVDAIASAGFKISRSKLVDLISSGDVRVNWTPVTKNGTTLKTGDVVSVSGKGRLK 300
           +EASLR+DA+ASAGFKISRSKLVDLISS DVRVNW  VTKNGT +KTGDVVSVSGKGRLK
Sbjct: 241 VEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDVVSVSGKGRLK 300

Query: 301 IGEINSTKKGKFSVELIRYV 318
           IGEIN TKKGKF+VE+IRY+
Sbjct: 301 IGEINETKKGKFAVEIIRYL 320

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
P710202.5e-1830.22Putative RNA-binding protein YlmH OS=Bacillus subtilis (strain 168) OX=224308 GN... [more]
Match NameE-valueIdentityDescription
XP_022142743.15.10e-219100.00uncharacterized protein LOC111012786 isoform X1 [Momordica charantia][more]
XP_022142745.11.35e-21699.68uncharacterized protein LOC111012786 isoform X2 [Momordica charantia][more]
XP_038899605.13.17e-20091.56putative RNA-binding protein YlmH [Benincasa hispida][more]
XP_004146247.11.14e-19591.82uncharacterized protein LOC101221944 [Cucumis sativus] >XP_031738291.1 uncharact... [more]
KAG6600381.11.27e-19588.71hypothetical protein SDJN03_05614, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
A0A6J1CP182.47e-219100.00uncharacterized protein LOC111012786 isoform X1 OS=Momordica charantia OX=3673 G... [more]
A0A6J1CLT46.54e-21799.68uncharacterized protein LOC111012786 isoform X2 OS=Momordica charantia OX=3673 G... [more]
A0A0A0LC565.50e-19691.82S4 RNA-binding domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G233... [more]
A0A6J1J1035.04e-19589.03uncharacterized protein LOC111480897 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A1S3C3I23.70e-19490.22putative RNA-binding protein YlmH isoform X2 OS=Cucumis melo OX=3656 GN=LOC10349... [more]
Match NameE-valueIdentityDescription
AT1G53120.13.7e-11365.00RNA-binding S4 domain-containing protein [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002942RNA-binding S4 domainSMARTSM00363s4_6coord: 242..302
e-value: 9.0E-11
score: 51.8
IPR002942RNA-binding S4 domainPFAMPF01479S4coord: 243..288
e-value: 1.4E-8
score: 34.3
IPR002942RNA-binding S4 domainCDDcd00165S4coord: 243..297
e-value: 1.84816E-10
score: 54.1778
IPR036986RNA-binding S4 domain superfamilyGENE3D3.10.290.10coord: 234..293
e-value: 3.4E-8
score: 34.8
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 143..225
e-value: 1.5E-21
score: 78.0
IPR040591YlmH, putative RNA-binding domainPFAMPF17774YlmH_RBDcoord: 148..223
e-value: 1.5E-13
score: 50.8
IPR017506Photosystem II S4TIGRFAMTIGR03069TIGR03069coord: 75..315
e-value: 7.9E-95
score: 314.8
NoneNo IPR availablePANTHERPTHR32219RNA-BINDING PROTEIN YLMH-RELATEDcoord: 48..317
NoneNo IPR availablePANTHERPTHR32219:SF3RNA-BINDING PROTEIN YLMH-RELATEDcoord: 48..317
NoneNo IPR availablePROSITEPS50889S4coord: 242..302
score: 13.58996
NoneNo IPR availableSUPERFAMILY55174Alpha-L RNA-binding motifcoord: 124..305

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC10g0927.1MC10g0927.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003723 RNA binding