MC10g0889 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC10g0889
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Unknown protein
Location	MC10: 7607897 .. 7609405 (-)
RNA-Seq Expression	MC10g0889
Synteny	MC10g0889

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5polypeptideCDSutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATGATAAATTTCCCATTTTATTTTATCTCTCTCCCTCAAACGATTTTTTATTTTTATTTTGATTTTTATTTTTTTGGTGGTTTACTTCCTAATTACTCCAACAATAACATTCTCTGTACTTTAATAACTGTTTCATAACGGTCTCCAAATATTTAAAAATCACGTTTTGACCCCTTTAAATATTCTATTTTACATTTTCAGAACGTCCCCAATCTGAAACAAAAGGCGCGCTCTCCAGCTTCGTCTTCTGCAGCACTCCTTCTTCGTCTTCGTCTTCGCCGACAAGTTTCTCTTCTCCGATCGTTTCTCCGATGCCGATCTCCGCCGCTTCTTCTTCTTCTTCCTCCTCCTCCTCCTCGTTTCTCGAATGTACCAGTCCGACGAGTCCGAGCGTTCAACTCGTATCGAAATCGGTATCGGATCGGCTTCTCGGCAAGTTCTTCGACGCCTCGCAATTCGACTTCGATTACGAGCAGAGTAGCTTGTGGTCTCCGCCAATTCCGAGGCGAGTGTTTTTGGATTCGCCGGCCGAAGTTTGCTCCGGCTACGAGGTTTTCTCGAAGCTCGACAGTGCGAAGAAGGCGTGGAGGAAATTCGTTATCTGTTTCAGAGTAAGTGCTCGCGAATCGCGATCGTATTTTAATTTACTCATTATTGGTTGCTAGGTTTCATTTTCTAATTGGTTTCGGAATCGCCTCGCTGTAATTTAAAAGACTCTGAGGCAGAGGCAGAGGCAGATTTAATTAGGATTGTTTGAGAAACGCGTGAAAAGAATTGCGTTAAATTAAATGCTTAAATCGAACGTATTCGCGGATAAATTAACTTTAATCAATCGAGCGAGAAATCAAAGAGGAAAACAAAGAAAACGGAAAATCTACATTTACTTTCCTAATTTCCAAAGTAAAAAGTTAGAATCGTAGAAACCGTTATCTCTTTATTGTTTATGAGCATGATTTCGTTTTCTGTTTACACTGCAATCTTTAAAATTGTATTAACTGTATTCTTGTGTTCATATCCATGAAGATACGGAAATCATCATGTTTTAATGGTATGATGTTAACTAGAAAGTTGTGGTGTTTAATGCAGGGATTTTGGTGTTCTTGGAATCCATGATTCCACCTTACAACTTTGTTGAGTGACTCTCCCTCTCCAACTATGATATATGGCTGATTCATAATGATTCAGGAAAAAAGGAAACAGAAATTAGTTTTTTCTTTTGAGGATTCTGTTAATTGTATTCTTATTTAGTACCATTGAAGAAAAAAGAAAAAGAAGAAATCAATACTCACTTCTATTTGCCATAAAAACTGGGGAAAAAAAAAAGGAAGAATATTCACATTATTTGGCTTCTCCCTTTTCACTGTGTAGAATTTGAATTTGGTATATACAGCGACCCTTCAATCTCAGACATACTCAGTCCTGCAGCTGCCATGGGGATATTTTATGCAGAAAAACAAAAGGGGAATTTCAGACTCTGCAAACTGTCTCCGTGCAGGTAAGGTAAAGC

mRNA sequence

AAATGATAAATTTCCCATTTTATTTTATCTCTCTCCCTCAAACGATTTTTTATTTTTATTTTGATTTTTATTTTTTTGGTGGTTTACTTCCTAATTACTCCAACAATAACATTCTCTGTACTTTAATAACTGTTTCATAACGGTCTCCAAATATTTAAAAATCACGTTTTGACCCCTTTAAATATTCTATTTTACATTTTCAGAACGTCCCCAATCTGAAACAAAAGGCGCGCTCTCCAGCTTCGTCTTCTGCAGCACTCCTTCTTCGTCTTCGTCTTCGCCGACAAGTTTCTCTTCTCCGATCGTTTCTCCGATGCCGATCTCCGCCGCTTCTTCTTCTTCTTCCTCCTCCTCCTCCTCGTTTCTCGAATGTACCAGTCCGACGAGTCCGAGCGTTCAACTCGTATCGAAATCGGTATCGGATCGGCTTCTCGGCAAGTTCTTCGACGCCTCGCAATTCGACTTCGATTACGAGCAGAGTAGCTTGTGGTCTCCGCCAATTCCGAGGCGAGTGTTTTTGGATTCGCCGGCCGAAGTTTGCTCCGGCTACGAGGTTTTCTCGAAGCTCGACAGTGCGAAGAAGGCGTGGAGGAAATTCGTTATCTGTTTCAGAGGATTTTGGTGTTCTTGGAATCCATGATTCCACCTTACAACTTTGTTGAGTGACTCTCCCTCTCCAACTATGATATATGGCTGATTCATAATGATTCAGGAAAAAAGGAAACAGAAATTAGTTTTTTCTTTTGAGGATTCTGTTAATTGTATTCTTATTTAGTACCATTGAAGAAAAAAGAAAAAGAAGAAATCAATACTCACTTCTATTTGCCATAAAAACTGGGGAAAAAAAAAAGGAAGAATATTCACATTATTTGGCTTCTCCCTTTTCACTGTGTAGAATTTGAATTTGGTATATACAGCGACCCTTCAATCTCAGACATACTCAGTCCTGCAGCTGCCATGGGGATATTTTATGCAGAAAAACAAAAGGGGAATTTCAGACTCTGCAAACTGTCTCCGTGCAGGTAAGGTAAAGC

Coding sequence (CDS)

ATGCCGATCTCCGCCGCTTCTTCTTCTTCTTCCTCCTCCTCCTCCTCGTTTCTCGAATGTACCAGTCCGACGAGTCCGAGCGTTCAACTCGTATCGAAATCGGTATCGGATCGGCTTCTCGGCAAGTTCTTCGACGCCTCGCAATTCGACTTCGATTACGAGCAGAGTAGCTTGTGGTCTCCGCCAATTCCGAGGCGAGTGTTTTTGGATTCGCCGGCCGAAGTTTGCTCCGGCTACGAGGTTTTCTCGAAGCTCGACAGTGCGAAGAAGGCGTGGAGGAAATTCGTTATCTGTTTCAGAGGATTTTGGTGTTCTTGGAATCCATGA

Protein sequence

MPISAASSSSSSSSSSFLECTSPTSPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSPAEVCSGYEVFSKLDSAKKAWRKFVICFRGFWCSWNP

Homology

[Close]

BLAST of MC10g0889 vs. NCBI nr
Match: XP_022142869.1 (uncharacterized protein LOC111012878 [Momordica charantia])

HSP 1 Score: 213 bits (541), Expect = 2.38e-69
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0


Query: 1   MPISAASSSSSSSSSSFLECTSPTSPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWS 60
           MPISAASSSSSSSSSSFLECTSPTSPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWS
Sbjct: 1   MPISAASSSSSSSSSSFLECTSPTSPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWS 60

Query: 61  PPIPRRVFLDSPAEVCSGYEVFSKLDSAKKAWRKFVICFRGFWCSWNP 108
           PPIPRRVFLDSPAEVCSGYEVFSKLDSAKKAWRKFVICFRGFWCSWNP
Sbjct: 61  PPIPRRVFLDSPAEVCSGYEVFSKLDSAKKAWRKFVICFRGFWCSWNP 108

[Close]

BLAST of MC10g0889 vs. NCBI nr
Match: XP_022983484.1 (uncharacterized protein LOC111482071 [Cucurbita maxima])

HSP 1 Score: 181 bits (458), Expect = 1.02e-56
Identity = 91/108 (84.26%), Postives = 96/108 (88.89%), Query Frame = 0


Query: 1   MPISAASSSSSSSSSSFLECTSPTSPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWS 60
           MPIS  SS+ SSS   F+EC +PT PSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWS
Sbjct: 1   MPISTESSTPSSSC--FIECATPTIPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWS 60

Query: 61  PPIPRRVFLDSPAEVCSGYEVFSKLDSAKKAWRKFVICFRGFWCSWNP 108
           PPIPRRVFLDSP +VCSGYEV SKL+ AK AWRKFVICFRGFWCSWNP
Sbjct: 61  PPIPRRVFLDSPLDVCSGYEVLSKLEKAKTAWRKFVICFRGFWCSWNP 106

[Close]

BLAST of MC10g0889 vs. NCBI nr
Match: XP_023516499.1 (uncharacterized protein LOC111780353 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 180 bits (457), Expect = 1.46e-56
Identity = 91/108 (84.26%), Postives = 96/108 (88.89%), Query Frame = 0


Query: 1   MPISAASSSSSSSSSSFLECTSPTSPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWS 60
           MPIS  SS+ SSS   F+EC +PT PSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWS
Sbjct: 1   MPISTESSTPSSSC--FIECGTPTIPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWS 60

Query: 61  PPIPRRVFLDSPAEVCSGYEVFSKLDSAKKAWRKFVICFRGFWCSWNP 108
           PPIPRRVFLDSP +VCSGYEV SKL+ AK AWRKFVICFRGFWCSWNP
Sbjct: 61  PPIPRRVFLDSPVDVCSGYEVLSKLEKAKTAWRKFVICFRGFWCSWNP 106

[Close]

BLAST of MC10g0889 vs. NCBI nr
Match: XP_022942868.1 (uncharacterized protein LOC111447770 [Cucurbita moschata])

HSP 1 Score: 179 bits (454), Expect = 4.17e-56
Identity = 90/108 (83.33%), Postives = 96/108 (88.89%), Query Frame = 0


Query: 1   MPISAASSSSSSSSSSFLECTSPTSPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWS 60
           MPIS  SS+ SSS   F++C +PT PSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWS
Sbjct: 1   MPISTESSTPSSSC--FIKCATPTIPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWS 60

Query: 61  PPIPRRVFLDSPAEVCSGYEVFSKLDSAKKAWRKFVICFRGFWCSWNP 108
           PPIPRRVFLDSP +VCSGYEV SKL+ AK AWRKFVICFRGFWCSWNP
Sbjct: 61  PPIPRRVFLDSPLDVCSGYEVLSKLEKAKTAWRKFVICFRGFWCSWNP 106

[Close]

BLAST of MC10g0889 vs. NCBI nr
Match: XP_038876207.1 (uncharacterized protein LOC120068490 isoform X1 [Benincasa hispida])

HSP 1 Score: 178 bits (451), Expect = 1.27e-55
Identity = 91/107 (85.05%), Postives = 98/107 (91.59%), Query Frame = 0


Query: 1   MPISAASSSSSSSSSSFLECTSPTSPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWS 60
           MPISA SSSSSS S+SFLEC +PTSPSVQLVSKSVSDRLLGKFFDAS+FDFDYEQSSLWS
Sbjct: 1   MPISADSSSSSSCSASFLECATPTSPSVQLVSKSVSDRLLGKFFDASKFDFDYEQSSLWS 60

Query: 61  PPIPRRVFLDSPAEVCSGYEVFSKLDSAKKAWRKFVICFRGFWCSWN 107
           PPI R+VFLDSPA+VCSGY V SKLD A+KAWRKF+ICF GFWCS N
Sbjct: 61  PPIQRKVFLDSPADVCSGYVVLSKLDYARKAWRKFIICFSGFWCSLN 107

[Close]

BLAST of MC10g0889 vs. ExPASy TrEMBL
Match: A0A6J1CMP9 (uncharacterized protein LOC111012878 OS=Momordica charantia OX=3673 GN=LOC111012878 PE=4 SV=1)

HSP 1 Score: 213 bits (541), Expect = 1.15e-69
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0


Query: 1   MPISAASSSSSSSSSSFLECTSPTSPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWS 60
           MPISAASSSSSSSSSSFLECTSPTSPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWS
Sbjct: 1   MPISAASSSSSSSSSSFLECTSPTSPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWS 60

Query: 61  PPIPRRVFLDSPAEVCSGYEVFSKLDSAKKAWRKFVICFRGFWCSWNP 108
           PPIPRRVFLDSPAEVCSGYEVFSKLDSAKKAWRKFVICFRGFWCSWNP
Sbjct: 61  PPIPRRVFLDSPAEVCSGYEVFSKLDSAKKAWRKFVICFRGFWCSWNP 108

[Close]

BLAST of MC10g0889 vs. ExPASy TrEMBL
Match: A0A6J1J7J0 (uncharacterized protein LOC111482071 OS=Cucurbita maxima OX=3661 GN=LOC111482071 PE=4 SV=1)

HSP 1 Score: 181 bits (458), Expect = 4.96e-57
Identity = 91/108 (84.26%), Postives = 96/108 (88.89%), Query Frame = 0


Query: 1   MPISAASSSSSSSSSSFLECTSPTSPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWS 60
           MPIS  SS+ SSS   F+EC +PT PSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWS
Sbjct: 1   MPISTESSTPSSSC--FIECATPTIPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWS 60

Query: 61  PPIPRRVFLDSPAEVCSGYEVFSKLDSAKKAWRKFVICFRGFWCSWNP 108
           PPIPRRVFLDSP +VCSGYEV SKL+ AK AWRKFVICFRGFWCSWNP
Sbjct: 61  PPIPRRVFLDSPLDVCSGYEVLSKLEKAKTAWRKFVICFRGFWCSWNP 106

[Close]

BLAST of MC10g0889 vs. ExPASy TrEMBL
Match: A0A6J1FVV1 (uncharacterized protein LOC111447770 OS=Cucurbita moschata OX=3662 GN=LOC111447770 PE=4 SV=1)

HSP 1 Score: 179 bits (454), Expect = 2.02e-56
Identity = 90/108 (83.33%), Postives = 96/108 (88.89%), Query Frame = 0


Query: 1   MPISAASSSSSSSSSSFLECTSPTSPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWS 60
           MPIS  SS+ SSS   F++C +PT PSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWS
Sbjct: 1   MPISTESSTPSSSC--FIKCATPTIPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWS 60

Query: 61  PPIPRRVFLDSPAEVCSGYEVFSKLDSAKKAWRKFVICFRGFWCSWNP 108
           PPIPRRVFLDSP +VCSGYEV SKL+ AK AWRKFVICFRGFWCSWNP
Sbjct: 61  PPIPRRVFLDSPLDVCSGYEVLSKLEKAKTAWRKFVICFRGFWCSWNP 106

[Close]

BLAST of MC10g0889 vs. ExPASy TrEMBL
Match: A0A6J1J4Z5 (uncharacterized protein LOC111482673 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111482673 PE=4 SV=1)

HSP 1 Score: 160 bits (405), Expect = 5.44e-49
Identity = 83/103 (80.58%), Postives = 91/103 (88.35%), Query Frame = 0


Query: 1   MPISAASSSSSSSSSSFLECTSPTSPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWS 60
           MP SA SSSSSSSSSSFL+C +P S SVQLVSKS SDRLL KFFDAS+F+FDYEQSSLWS
Sbjct: 1   MPTSADSSSSSSSSSSFLDCATPRSLSVQLVSKSASDRLLDKFFDASKFNFDYEQSSLWS 60

Query: 61  PPIPRRVFLDSPAEVCSGYEVFSKLDSAKKAWRKFVICFRGFW 103
           PPIPRRVFLDSP +VCSGYEV SKL++ KKAWRKF+ CF GFW
Sbjct: 61  PPIPRRVFLDSPDDVCSGYEVLSKLENVKKAWRKFITCFGGFW 103

[Close]

BLAST of MC10g0889 vs. ExPASy TrEMBL
Match: A0A6J1EYJ9 (uncharacterized protein LOC111437603 OS=Cucurbita moschata OX=3662 GN=LOC111437603 PE=4 SV=1)

HSP 1 Score: 158 bits (399), Expect = 5.55e-48
Identity = 82/102 (80.39%), Postives = 91/102 (89.22%), Query Frame = 0


Query: 4   SAASSSSSSSSSSFLECTSPTSPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPI 63
           S++SSSSSSSSSSFL+C +P S SVQLVSK  SDRLLGKFFDAS+FDFDYEQSSLWSPPI
Sbjct: 9   SSSSSSSSSSSSSFLDCATPKSLSVQLVSKLASDRLLGKFFDASKFDFDYEQSSLWSPPI 68

Query: 64  PRRVFLDSPAEVCSGYEVFSKLDSAKKAWRKFVICFRGFWCS 105
           PRRVFLDSPA+VCSGYEV SKL++AKKAWRK + CF G  CS
Sbjct: 69  PRRVFLDSPADVCSGYEVLSKLENAKKAWRKLITCFGGLLCS 110

[Close]

BLAST of MC10g0889 vs. TAIR 10
Match: AT4G15140.1 (unknown protein; Has 26 Blast hits to 26 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 43.5 bits (101), Expect = 1.2e-04
Identity = 26/57 (45.61%), Postives = 32/57 (56.14%), Query Frame = 0


Query: 24 TSPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVF----LDSPAEVC 77
          T+  V+ +   +   LL KF D S F FDY QSSLWSP +PR       LDS + VC
Sbjct: 21 TTKVVEYLQPVMCRELLCKFPDNSAFGFDYSQSSLWSPLLPRNYASPSDLDSDSCVC 77

The following BLAST results are available for this feature:

BLAST of MC10g0889 vs.


Match Name	E-value	Identity	Description

BLAST of MC10g0889 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022142869.1	2.38e-69	100.00	uncharacterized protein LOC111012878 [Momordica charantia]	[more]
XP_022983484.1	1.02e-56	84.26	uncharacterized protein LOC111482071 [Cucurbita maxima]	[more]
XP_023516499.1	1.46e-56	84.26	uncharacterized protein LOC111780353 [Cucurbita pepo subsp. pepo]	[more]
XP_022942868.1	4.17e-56	83.33	uncharacterized protein LOC111447770 [Cucurbita moschata]	[more]
XP_038876207.1	1.27e-55	85.05	uncharacterized protein LOC120068490 isoform X1 [Benincasa hispida]	[more]

BLAST of MC10g0889 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CMP9	1.15e-69	100.00	uncharacterized protein LOC111012878 OS=Momordica charantia OX=3673 GN=LOC111012...	[more]
A0A6J1J7J0	4.96e-57	84.26	uncharacterized protein LOC111482071 OS=Cucurbita maxima OX=3661 GN=LOC111482071...	[more]
A0A6J1FVV1	2.02e-56	83.33	uncharacterized protein LOC111447770 OS=Cucurbita moschata OX=3662 GN=LOC1114477...	[more]
A0A6J1J4Z5	5.44e-49	80.58	uncharacterized protein LOC111482673 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1EYJ9	5.55e-48	80.39	uncharacterized protein LOC111437603 OS=Cucurbita moschata OX=3662 GN=LOC1114376...	[more]

BLAST of MC10g0889 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G15140.1	1.2e-04	45.61	unknown protein; Has 26 Blast hits to 26 proteins in 10 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..28
None	No IPR available	PANTHER	PTHR34287	OS06G0551500 PROTEIN-RELATED	coord: 1..105
None	No IPR available	PANTHER	PTHR34287:SF12	SUBFAMILY NOT NAMED	coord: 1..105

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC10g0889.1	MC10g0889.1	mRNA