MC10g0434 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC10g0434
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionribosome-inactivating protein SNAIf-like
LocationMC10: 3495139 .. 3495900 (+)
RNA-Seq ExpressionMC10g0434
SyntenyMC10g0434
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ACACGTCTTATGGGTCAAGATGGGCTATGTTTGGACAGCGATGGGACGAGCCGCTACAACTTCCCAAAACTAGTCCCATGCAACCCCAAGGAAGAGAGGCAGGTGTGGAACATCGTCGACGACGGCACGATCCATTGGACCAACGACAGATGCCTCTTCCCTTACGGCAAAAAGGTCACAGGACAATACTTCCTCGTAAAAACAGGCATGTGCGACGAACTGACACAGCAAGAAAAGACATGGAGCCTAAACAACAATCCCAACACAATCTCCCACGTGGACTCGGGCCTCGTCCTGACCGTGAAAAACTACACCAAGACTCTCACGGTGGTGCCCTACAAGAGCAACAACCCATCGCAGATTTGGGCCATTCAAGAAGCTCCACGTGTCGGCCTCATCATGGGACTTCACAACTACAAGTGTCTGTGGTCAGACGGGCCACATCGGTCCGGCCAAGTGTTTGTGCATGACTGTTTGGCAGGTACGTGGTTCAACCAAGTGTGGGCGTTGTTTCACGACGGCTCCATTCGTTTGGAATCGGACAGAAGTTTGTGCTTGACGTCTTCGTCGGGGGCGGCTCCTTATTTCTTTGTGGATGTGTTTAAATGCGAGGACAAGGCTGAGCAGCGGTGGGTGGTGGAGACTGACGGCGGCGCCATTCACCACCCCGGCTCCGACTTGGTCATGGATGTCATTCCGATGAGCAACCAGCCACAACCGGTTGTTCTGTTTTCGCAGAATGGCGCGACAACCCAGCAATGG

mRNA sequence

ACACGTCTTATGGGTCAAGATGGGCTATGTTTGGACAGCGATGGGACGAGCCGCTACAACTTCCCAAAACTAGTCCCATGCAACCCCAAGGAAGAGAGGCAGGTGTGGAACATCGTCGACGACGGCACGATCCATTGGACCAACGACAGATGCCTCTTCCCTTACGGCAAAAAGGTCACAGGACAATACTTCCTCGTAAAAACAGGCATGTGCGACGAACTGACACAGCAAGAAAAGACATGGAGCCTAAACAACAATCCCAACACAATCTCCCACGTGGACTCGGGCCTCGTCCTGACCGTGAAAAACTACACCAAGACTCTCACGGTGGTGCCCTACAAGAGCAACAACCCATCGCAGATTTGGGCCATTCAAGAAGCTCCACGTGTCGGCCTCATCATGGGACTTCACAACTACAAGTGTCTGTGGTCAGACGGGCCACATCGGTCCGGCCAAGTGTTTGTGCATGACTGTTTGGCAGGTACGTGGTTCAACCAAGTGTGGGCGTTGTTTCACGACGGCTCCATTCGTTTGGAATCGGACAGAAGTTTGTGCTTGACGTCTTCGTCGGGGGCGGCTCCTTATTTCTTTGTGGATGTGTTTAAATGCGAGGACAAGGCTGAGCAGCGGTGGGTGGTGGAGACTGACGGCGGCGCCATTCACCACCCCGGCTCCGACTTGGTCATGGATGTCATTCCGATGAGCAACCAGCCACAACCGGTTGTTCTGTTTTCGCAGAATGGCGCGACAACCCAGCAATGG

Coding sequence (CDS)

ACACGTCTTATGGGTCAAGATGGGCTATGTTTGGACAGCGATGGGACGAGCCGCTACAACTTCCCAAAACTAGTCCCATGCAACCCCAAGGAAGAGAGGCAGGTGTGGAACATCGTCGACGACGGCACGATCCATTGGACCAACGACAGATGCCTCTTCCCTTACGGCAAAAAGGTCACAGGACAATACTTCCTCGTAAAAACAGGCATGTGCGACGAACTGACACAGCAAGAAAAGACATGGAGCCTAAACAACAATCCCAACACAATCTCCCACGTGGACTCGGGCCTCGTCCTGACCGTGAAAAACTACACCAAGACTCTCACGGTGGTGCCCTACAAGAGCAACAACCCATCGCAGATTTGGGCCATTCAAGAAGCTCCACGTGTCGGCCTCATCATGGGACTTCACAACTACAAGTGTCTGTGGTCAGACGGGCCACATCGGTCCGGCCAAGTGTTTGTGCATGACTGTTTGGCAGGTACGTGGTTCAACCAAGTGTGGGCGTTGTTTCACGACGGCTCCATTCGTTTGGAATCGGACAGAAGTTTGTGCTTGACGTCTTCGTCGGGGGCGGCTCCTTATTTCTTTGTGGATGTGTTTAAATGCGAGGACAAGGCTGAGCAGCGGTGGGTGGTGGAGACTGACGGCGGCGCCATTCACCACCCCGGCTCCGACTTGGTCATGGATGTCATTCCGATGAGCAACCAGCCACAACCGGTTGTTCTGTTTTCGCAGAATGGCGCGACAACCCAGCAATGG

Protein sequence

TRLMGQDGLCLDSDGTSRYNFPKLVPCNPKEERQVWNIVDDGTIHWTNDRCLFPYGKKVTGQYFLVKTGMCDELTQQEKTWSLNNNPNTISHVDSGLVLTVKNYTKTLTVVPYKSNNPSQIWAIQEAPRVGLIMGLHNYKCLWSDGPHRSGQVFVHDCLAGTWFNQVWALFHDGSIRLESDRSLCLTSSSGAAPYFFVDVFKCEDKAEQRWVVETDGGAIHHPGSDLVMDVIPMSNQPQPVVLFSQNGATTQQW
Homology
BLAST of MC10g0434 vs. ExPASy Swiss-Prot
Match: O22415 (Ribosome-inactivating protein SNAIf OS=Sambucus nigra OX=4202 GN=SNA-If PE=1 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 5.0e-25
Identity = 85/259 (32.82%), Postives = 127/259 (49.03%), Query Frame = 0

Query: 2   RLMGQDGLCLD-SDGTSRY---NFPKLVPCNPKEERQVWNIVDDGTIHWTNDRCLFPYGK 61
           R+ G DGLC+D  DG   Y   N  +L PC   E  Q+W    DGTI W   +CL     
Sbjct: 324 RISGWDGLCVDVRDG--HYIDGNTVQLGPCG-NECNQLWTFRTDGTIRWLG-KCL----- 383

Query: 62  KVTGQYFLVKTGMCDELTQQEKTWSLNNNPNTISHVDSGLVLTVKNYTK-TLTVVPYKSN 121
             T    ++    C+ +  +   W ++ +  TI++  SGLVLT     + T   +    +
Sbjct: 384 -TTSSSVMIYD--CNTVPPEATKWVVSTD-GTITNPRSGLVLTAPQAAEGTALSLENNIH 443

Query: 122 NPSQIWAIQEA-PRVGLIMGLHNYKCLWSDGPHRSGQVFVHDCLAGTWFNQVWALFHDGS 181
              Q W + +  P V  I+G +   CL  +G   +  V++ DC+      Q WAL+ DG+
Sbjct: 444 AARQGWTVGDVEPLVTFIVG-YKQMCLTENG--ENNFVWLEDCVLNR-VEQEWALYGDGT 503

Query: 182 IRLESDRSLCLTSSSGAAPYFFVDVFKCEDKAEQRWVVETDGGAIHHPGSDLVMDVIPMS 241
           IR+ S+RSLC+TS     P   + + KCE    QRWV  T+ G I +P + LVMDV   +
Sbjct: 504 IRVNSNRSLCVTSED-HEPSDLIVILKCEGSGNQRWVFNTN-GTISNPNAKLVMDVAQSN 563

Query: 242 NQPQPVVLFSQNGATTQQW 255
              + ++L+   G   QQW
Sbjct: 564 VSLRKIILYPPTGNPNQQW 563

BLAST of MC10g0434 vs. ExPASy Swiss-Prot
Match: Q41358 (Ribosome-inactivating protein SNAI OS=Sambucus nigra OX=4202 GN=SNA-I PE=1 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.2e-23
Identity = 84/261 (32.18%), Postives = 124/261 (47.51%), Query Frame = 0

Query: 2   RLMGQDGLCLD------SDGTSRYNFPKLVPCNPKEERQVWNIVDDGTIHWTNDRCLFPY 61
           R+ G DGLC+D       DG    N  +L PC   E  Q+W    DGTI W         
Sbjct: 324 RISGWDGLCVDVRYGHYIDG----NPVQLRPCG-NECNQLWTFRTDGTIRW--------L 383

Query: 62  GKKVTGQYFLVKTGMCDELTQQEKTWSLNNNPNTISHVDSGLVLTVKNYTK-TLTVVPYK 121
           GK +T     V    C+ +  +   W ++ +  TI++  SGLVLT     + T   +   
Sbjct: 384 GKCLTAS-SSVMIYDCNTVPPEATKWVVSID-GTITNPHSGLVLTAPQAAEGTALSLENN 443

Query: 122 SNNPSQIWAIQEA-PRVGLIMGLHNYKCLWSDGPHRSGQVFVHDCLAGTWFNQVWALFHD 181
            +   Q W + +  P V  I+G +   CL  +G   +  V++ DC+      Q WAL+ D
Sbjct: 444 IHAARQGWTVGDVEPLVTFIVG-YKQMCLRENG--ENNFVWLEDCVLNR-VQQEWALYGD 503

Query: 182 GSIRLESDRSLCLTSSSGAAPYFFVDVFKCEDKAEQRWVVETDGGAIHHPGSDLVMDVIP 241
           G+IR+ S+RSLC+TS     P   + + KCE    QRWV  T+ G I +P + L+MDV  
Sbjct: 504 GTIRVNSNRSLCVTSED-HEPSDLIVILKCEGSGNQRWVFNTN-GTISNPNAKLLMDVAQ 563

Query: 242 MSNQPQPVVLFSQNGATTQQW 255
                + ++L+   G   QQW
Sbjct: 564 RDVSLRKIILYRPTGNPNQQW 563

BLAST of MC10g0434 vs. ExPASy Swiss-Prot
Match: Q9M654 (Ribosome-inactivating protein PMRIPm OS=Polygonatum multiflorum OX=45371 GN=RIPm PE=1 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 3.6e-23
Identity = 85/264 (32.20%), Postives = 126/264 (47.73%), Query Frame = 0

Query: 2   RLMGQDGLCLD-SDGTSRYNFP-KLVPCNPKEER-QVWNIVDDGTIHWTNDRCLFPYGKK 61
           R+ G+ G C+D  DG      P +++ C   +ER Q W    DGTI     +C+  YG K
Sbjct: 340 RISGRAGWCVDVKDGRDNDGNPIQVLSCGDGQERKQQWTFHRDGTIRSKLGKCMTAYGFK 399

Query: 62  VTGQYFLVKTGMCDELTQQEKTWSLNNNPNTISHVDSGLVLTV-KNYTKTLTVVPYKSNN 121
             G+Y ++    CD        W ++ +  TI++  SGLVLT  +  T T  +V    + 
Sbjct: 400 -HGEYVMIYD--CDTAIAGANKWVVSID-GTITNPISGLVLTAPRGATGTTLLVEKNVHA 459

Query: 122 PSQIWAIQE--APRVGLIMGLHNYKCLWSD-----GPHRSGQVFVHDCLAGTWFNQVWAL 181
             Q W + +   P V  I+G    KCL ++        R  +VF+ DC+      Q WAL
Sbjct: 460 ARQCWRVGDDVEPIVTKIVGFQE-KCLEANYLENTNVSRYTKVFLDDCVLDRQ-QQRWAL 519

Query: 182 FHDGSIRLESDRSLCLTSSSGAAPYFFVDVFKCEDKAEQRWVVETDGGAIHHPGSDLVMD 241
           + DG+IR +SDRSL +T + G      + +  C+    QRWV  TD G I +P + LVMD
Sbjct: 520 YSDGTIRADSDRSLRVT-ADGHRSLDSIIILACKGWGNQRWVFNTD-GTILNPNAKLVMD 579

Query: 242 VIPMSNQPQPVVLFSQNGATTQQW 255
           V         ++L    G   Q+W
Sbjct: 580 VKDSDVSLLQIILHQSTGKPNQKW 595

BLAST of MC10g0434 vs. ExPASy Swiss-Prot
Match: Q9M653 (Ribosome-inactivating protein PMRIPt OS=Polygonatum multiflorum OX=45371 GN=RIPt PE=1 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 2.6e-21
Identity = 81/258 (31.40%), Postives = 130/258 (50.39%), Query Frame = 0

Query: 2   RLMGQDGLCLDSDGTSRYN-FP-KLVPCNPKEERQVWNIVDDGTIHWTNDRCLFPYGKKV 61
           R+ G DGLC+D    S  +  P +L PC  +  +Q W    DGTI  +  +C+   G   
Sbjct: 343 RISGLDGLCMDVRNESNNDGIPIQLWPCGAQRNQQ-WTFHTDGTIQ-SMGKCMTSNGYH- 402

Query: 62  TGQYFLVKTGMCDELTQQEKTWSLNNNPNTISHVDSGLVLTVKNYTK-TLTVVPYKSNNP 121
            G Y ++    C      + T  + +   +I++  SGLVLT     + T+ +V   +++ 
Sbjct: 403 PGDYVMIFN--CSTAPVPDATKWVVSIDGSITNPHSGLVLTAPQAAQTTILLVVRNTHSA 462

Query: 122 SQIWAIQE--APRVGLIMGLHNYKCLWSDGPHRSGQVFVHDCLAGTWFNQVWALFHDGSI 181
            Q  ++ +   P V  I+G   Y CL  +  + + +V++ DC A     Q WAL+ DG+I
Sbjct: 463 KQGRSVGDDVEPIVTYIVGF-KYMCLQGNNENNT-RVWLEDC-AVDRPQQWWALYSDGTI 522

Query: 182 RLESDRSLCLTSSSGAAPYFFVDVFKCEDKAEQRWVVETDGGAIHHPGSDLVMDVIPMSN 241
           R++SDRSLC+T S G +    + +  C+    QR V  TD G I +P + LVMDV   + 
Sbjct: 523 RVDSDRSLCVT-SDGHSSRDAIIILTCDGGINQRLVFNTD-GTILNPNAQLVMDVRQSNV 582

Query: 242 QPQPVVLFSQNGATTQQW 255
             + ++L+   G   QQW
Sbjct: 583 ALRQIILYQPTGNPNQQW 590

BLAST of MC10g0434 vs. ExPASy Swiss-Prot
Match: P02879 (Ricin OS=Ricinus communis OX=3988 PE=1 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 1.1e-19
Identity = 86/267 (32.21%), Postives = 128/267 (47.94%), Query Frame = 0

Query: 2   RLMGQDGLCLD-SDGT-SRYNFPKLVPCNPK-EERQVWNIVDDGTIHWTNDRCLFPYGKK 61
           R++G++GLC+D  DG     N  +L PC    +  Q+W +  D TI  +N +CL  YG  
Sbjct: 326 RIVGRNGLCVDVRDGRFHNGNAIQLWPCKSNTDANQLWTLKRDNTIR-SNGKCLTTYGYS 385

Query: 62  VTGQYFLVKTGMCDELTQQEKTWSLNNNPNTISHVDSGLVL--TVKNYTKTLTVVPYKSN 121
             G Y ++    C+        W + +N  TI +  S LVL  T  N   TLTV      
Sbjct: 386 -PGVYVMIYD--CNTAATDATRWQIWDN-GTIINPRSSLVLAATSGNSGTTLTV------ 445

Query: 122 NPSQIWAIQEA--------PRVGLIMGLHNYKCLWSDGPHRSGQVFVHDCLAGTWFNQVW 181
             + I+A+ +         P V  I+GL+   CL ++    SGQV++ DC +     Q W
Sbjct: 446 -QTNIYAVSQGWLPTNNTQPFVTTIVGLYGL-CLQAN----SGQVWIEDC-SSEKAEQQW 505

Query: 182 ALFHDGSIRLESDRSLCLTSSSGAAPYFFVDVFKCEDKAE-QRWVVETDGGAIHHPGSDL 241
           AL+ DGSIR + +R  CLTS S       V +  C   +  QRW+ + D G I +  S L
Sbjct: 506 ALYADGSIRPQQNRDNCLTSDSNIRE-TVVKILSCGPASSGQRWMFKND-GTILNLYSGL 565

Query: 242 VMDVIPMSNQPQPVVLFSQNGATTQQW 255
           V+DV       + ++L+  +G   Q W
Sbjct: 566 VLDVRASDPSLKQIILYPLHGDPNQIW 572

BLAST of MC10g0434 vs. NCBI nr
Match: XP_022149256.1 (ribosome-inactivating protein SNAIf-like [Momordica charantia])

HSP 1 Score: 544 bits (1401), Expect = 1.19e-195
Identity = 251/251 (100.00%), Postives = 251/251 (100.00%), Query Frame = 0

Query: 4   MGQDGLCLDSDGTSRYNFPKLVPCNPKEERQVWNIVDDGTIHWTNDRCLFPYGKKVTGQY 63
           MGQDGLCLDSDGTSRYNFPKLVPCNPKEERQVWNIVDDGTIHWTNDRCLFPYGKKVTGQY
Sbjct: 1   MGQDGLCLDSDGTSRYNFPKLVPCNPKEERQVWNIVDDGTIHWTNDRCLFPYGKKVTGQY 60

Query: 64  FLVKTGMCDELTQQEKTWSLNNNPNTISHVDSGLVLTVKNYTKTLTVVPYKSNNPSQIWA 123
           FLVKTGMCDELTQQEKTWSLNNNPNTISHVDSGLVLTVKNYTKTLTVVPYKSNNPSQIWA
Sbjct: 61  FLVKTGMCDELTQQEKTWSLNNNPNTISHVDSGLVLTVKNYTKTLTVVPYKSNNPSQIWA 120

Query: 124 IQEAPRVGLIMGLHNYKCLWSDGPHRSGQVFVHDCLAGTWFNQVWALFHDGSIRLESDRS 183
           IQEAPRVGLIMGLHNYKCLWSDGPHRSGQVFVHDCLAGTWFNQVWALFHDGSIRLESDRS
Sbjct: 121 IQEAPRVGLIMGLHNYKCLWSDGPHRSGQVFVHDCLAGTWFNQVWALFHDGSIRLESDRS 180

Query: 184 LCLTSSSGAAPYFFVDVFKCEDKAEQRWVVETDGGAIHHPGSDLVMDVIPMSNQPQPVVL 243
           LCLTSSSGAAPYFFVDVFKCEDKAEQRWVVETDGGAIHHPGSDLVMDVIPMSNQPQPVVL
Sbjct: 181 LCLTSSSGAAPYFFVDVFKCEDKAEQRWVVETDGGAIHHPGSDLVMDVIPMSNQPQPVVL 240

Query: 244 FSQNGATTQQW 254
           FSQNGATTQQW
Sbjct: 241 FSQNGATTQQW 251

BLAST of MC10g0434 vs. NCBI nr
Match: XP_004151509.2 (nigrin b [Cucumis sativus] >KGN57577.1 hypothetical protein Csa_010264 [Cucumis sativus])

HSP 1 Score: 132 bits (332), Expect = 4.16e-33
Identity = 96/271 (35.42%), Postives = 143/271 (52.77%), Query Frame = 0

Query: 1   TRLMGQDGLCLDSDGTSRY-----NFP-KLVPCNPKEERQVWNIVDDGTIHWTNDR-CLF 60
           T L+G+DGLCL+      Y     NFP +L+PC+ K++ Q+W +V DGTI   NDR CL 
Sbjct: 39  THLVGRDGLCLEMVLLRSYKPAGINFPTRLLPCDEKKQTQLWTVVGDGTIRPMNDRFCLA 98

Query: 61  P---YG---KKVTGQYFLVKTGMCDELTQQEKTWSLNNNPNTISHVDSGLVLTVKNYTKT 120
               YG   K V  +        C +++   K W ++ N  TI+  +S +VLT  +   T
Sbjct: 99  ADVFYGVINKAVVSE--------CGKVSDSNKQW-IHKNDGTIALAESRMVLTGDSDYVT 158

Query: 121 LTVVPYKSNNPSQIWAIQEA--PRVGLIMGLHNYKCLWSDGPHRSGQVFVHDCLAGTWFN 180
           L  + Y    PSQ W + E+  P V  I  L+N  CL S     S  V ++ C   T + 
Sbjct: 159 LQSIKY---TPSQSWEVTESLNPMVANIEWLNNL-CLQSTDD--SSNVGLNGCNTYTKY- 218

Query: 181 QVWALFHDGSIRLESDRSLCLTSSSGAAPYFFVDVFKCEDKAEQRWVVETDGGAIHHPGS 240
           Q WAL+ DG+IR   +R+ CLTS         V V KCEDK +QRW +      I HP +
Sbjct: 219 QRWALYADGTIRQHVNRNYCLTSEQNYDRS--VVVSKCEDKPQQRWSLNAKDSTIDHPNT 278

Query: 241 DLVMDVIPMSNQPQPVVLFSQN--GATTQQW 254
           ++V+DV+ + +   P+V+ + +  G+ +Q+W
Sbjct: 279 NMVLDVLNVLDSASPLVIVTNHPDGSASQRW 291

BLAST of MC10g0434 vs. NCBI nr
Match: XP_004146289.1 (nigrin b [Cucumis sativus] >KGN57583.1 hypothetical protein Csa_010930 [Cucumis sativus])

HSP 1 Score: 131 bits (330), Expect = 7.15e-33
Identity = 98/264 (37.12%), Postives = 135/264 (51.14%), Query Frame = 0

Query: 1   TRLMGQDGLCLDSDGT--SRYNFP-KLVPCNP-KEERQVWNIVDDGTIHWTNDR-CLFPY 60
           T L+G+DGLCL+         NFP +L PCN  K++ Q+W ++ D TI   NDR CL  Y
Sbjct: 35  THLVGRDGLCLEMSPWFYKGSNFPTRLSPCNEQKKQTQLWTVLQDETIRPMNDRYCLVSY 94

Query: 61  GKKVTGQYFL-VKTGMCDELTQQEKTWSLNNNPNTISHVDSGLVLTVKNYTKTLTVVPYK 120
              V+  +   V    C +     K W ++    TI HV SG+VLT  +   T   V   
Sbjct: 95  ---VSVNFITNVVVSECAKEPHSNKKW-IHKEDRTIVHVGSGMVLTGNSNYVT---VQRN 154

Query: 121 SNNPSQIWAIQEA--PRVGLIMGLHNYKCLWSDGPHRSGQVFVHDCLAGTWFNQVWALFH 180
            N PSQ W   ++  P V  I  L N  CL S     S  V +  C +    +Q W+L+ 
Sbjct: 155 KNAPSQSWEATKSLTPMVANIKWLENL-CLQS--TKDSNYVQLDGCNSEN-KSQHWSLYG 214

Query: 181 DGSIRLESDRSLCLTSSSGAAPYFFVDVFKCEDKAEQRWVVETDGGAIHHPGSDLVMDV- 240
           DG+IR   +R+ CLTS        FV V KCEDK +QRW +  +   I+HP +D+VMDV 
Sbjct: 215 DGTIRKHVNRNYCLTSEQDFGR--FVAVSKCEDKPQQRWGLGAEDNTINHPNTDMVMDVL 274

Query: 241 -IPMSNQPQPVVLFSQNGATTQQW 254
            +P  + P  VV   ++G  TQ+W
Sbjct: 275 SVPFDDLPLAVVTNHRDGTATQRW 285

BLAST of MC10g0434 vs. NCBI nr
Match: NP_001274403.1 (uncharacterized protein LOC101221335 precursor [Cucumis sativus] >KAE8650527.1 hypothetical protein Csa_010656 [Cucumis sativus] >BAA88294.1 XSP30 [Cucumis sativus])

HSP 1 Score: 130 bits (327), Expect = 2.22e-32
Identity = 96/265 (36.23%), Postives = 139/265 (52.45%), Query Frame = 0

Query: 1   TRLMGQDGLCLDSDGTSR---YNFP-KLVPCNPKEERQVWNIVDDGTIHWTNDR-CLFPY 60
           T L+G+DGLCL+     +    NFP +L PC+ K++ Q+W IV DGTI   ND+ CL   
Sbjct: 39  THLVGRDGLCLEMSPWYKPAGINFPTRLSPCDEKKQTQLWTIVGDGTIRPMNDKFCLAA- 98

Query: 61  GKKVTGQYFLVKTGMCDELTQQEKTWSLNNNPNTISHVDSGLVLTVKNYTKTLTVVPYKS 120
            +   G         C +++   K W+  N+  TI+ VDS +VL     T  L  V  +S
Sbjct: 99  -EVFYGVINKAVVSECGKVSDPNKKWTQKND-GTIALVDSRMVL-----TGDLDYVTLQS 158

Query: 121 NN--PSQIWAIQEA--PRVGLIMGLHNYKCLWSDGPHRSGQVFVHDCLAGTWFNQVWALF 180
           N   PSQ W + E+    V  I  L+N  CL S     S  V ++ C     + Q WAL+
Sbjct: 159 NKYTPSQSWEVTESLNSMVANIEWLNNL-CLQSTDD--SSHVGLNGCNTDNKY-QRWALY 218

Query: 181 HDGSIRLESDRSLCLTSSSGAAPYFFVDVFKCEDKAEQRWVVETDGGAIHHPGSDLVMDV 240
            DG+IR   +++ CLTS        FV V KCEDK +QRW ++     I HP +D+V+DV
Sbjct: 219 ADGTIRQHVNKNYCLTSDQDFGR--FVVVSKCEDKPQQRWSLDAKDYTIDHPNTDMVLDV 278

Query: 241 --IPMSNQPQPVVLFSQNGATTQQW 254
             +P S  P  +V   ++G+ +Q+W
Sbjct: 279 FSVPDSTFPSVLVTNRRDGSASQRW 289

BLAST of MC10g0434 vs. NCBI nr
Match: XP_038885951.1 (nigrin b-like [Benincasa hispida])

HSP 1 Score: 129 bits (324), Expect = 5.86e-32
Identity = 91/259 (35.14%), Postives = 142/259 (54.83%), Query Frame = 0

Query: 1   TRLMGQDGLCLDS-DGTSRYNFP-KLVPCNPKEERQVWNIVDDGTIHWTNDRCLFPYGKK 60
           T L+G+DGLCLD   G S  + P +L PC P +  Q+W I  DGTI  T  +CL P G +
Sbjct: 37  THLVGRDGLCLDVIGGYSDSHIPTQLWPCGP-QNNQLWTIQVDGTIR-TMGKCLVPNGHE 96

Query: 61  VTGQYFLVKTGMCDELTQQEKTWSLNNNPNTISHVDSGLVLTVKNY-TKTLTVVPYKSNN 120
             G Y ++    C+++  Q+KTW L  +  T+ HV SGLVLT +      +T +   ++ 
Sbjct: 97  -PGSYTMIDD--CNKVDTQDKTWKLYPD-GTLVHVWSGLVLTGQGTGPHAITTIETNTSA 156

Query: 121 PSQIWAIQE--APRVGLIMGLHNYKCLWSDGPHRSGQVFVHDCLAGTWFNQVWALFHDGS 180
           P+Q W   +  +P V  I+GL  + CL +   +    V+++ C+      Q WA+++DG+
Sbjct: 157 PTQSWGTADDGSPIVVAIVGLR-HMCLQAQNDNV--HVWMNSCVKNN-RQQYWAVYNDGT 216

Query: 181 IRLESDRSLCLTSSSGAAPYFFVDVFKCEDKAEQRWVVETDGGAIHHPGSDLVMDVIPMS 240
           IR   + S CL SS+G      + + KC+   +QRWV + DG  I +P +++VMDV    
Sbjct: 217 IRTNYNTSFCL-SSTGKGLNDAIGLAKCQGLPQQRWVAKEDG-TILNPINNMVMDVKGSD 276

Query: 241 NQPQPVVLFSQNGATTQQW 254
              + ++LF+  G   QQW
Sbjct: 277 PNLRKIILFAPTGNPNQQW 283

BLAST of MC10g0434 vs. ExPASy TrEMBL
Match: A0A6J1D7U5 (ribosome-inactivating protein SNAIf-like OS=Momordica charantia OX=3673 GN=LOC111017720 PE=4 SV=1)

HSP 1 Score: 544 bits (1401), Expect = 5.75e-196
Identity = 251/251 (100.00%), Postives = 251/251 (100.00%), Query Frame = 0

Query: 4   MGQDGLCLDSDGTSRYNFPKLVPCNPKEERQVWNIVDDGTIHWTNDRCLFPYGKKVTGQY 63
           MGQDGLCLDSDGTSRYNFPKLVPCNPKEERQVWNIVDDGTIHWTNDRCLFPYGKKVTGQY
Sbjct: 1   MGQDGLCLDSDGTSRYNFPKLVPCNPKEERQVWNIVDDGTIHWTNDRCLFPYGKKVTGQY 60

Query: 64  FLVKTGMCDELTQQEKTWSLNNNPNTISHVDSGLVLTVKNYTKTLTVVPYKSNNPSQIWA 123
           FLVKTGMCDELTQQEKTWSLNNNPNTISHVDSGLVLTVKNYTKTLTVVPYKSNNPSQIWA
Sbjct: 61  FLVKTGMCDELTQQEKTWSLNNNPNTISHVDSGLVLTVKNYTKTLTVVPYKSNNPSQIWA 120

Query: 124 IQEAPRVGLIMGLHNYKCLWSDGPHRSGQVFVHDCLAGTWFNQVWALFHDGSIRLESDRS 183
           IQEAPRVGLIMGLHNYKCLWSDGPHRSGQVFVHDCLAGTWFNQVWALFHDGSIRLESDRS
Sbjct: 121 IQEAPRVGLIMGLHNYKCLWSDGPHRSGQVFVHDCLAGTWFNQVWALFHDGSIRLESDRS 180

Query: 184 LCLTSSSGAAPYFFVDVFKCEDKAEQRWVVETDGGAIHHPGSDLVMDVIPMSNQPQPVVL 243
           LCLTSSSGAAPYFFVDVFKCEDKAEQRWVVETDGGAIHHPGSDLVMDVIPMSNQPQPVVL
Sbjct: 181 LCLTSSSGAAPYFFVDVFKCEDKAEQRWVVETDGGAIHHPGSDLVMDVIPMSNQPQPVVL 240

Query: 244 FSQNGATTQQW 254
           FSQNGATTQQW
Sbjct: 241 FSQNGATTQQW 251

BLAST of MC10g0434 vs. ExPASy TrEMBL
Match: A0A0A0LAC2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G217140 PE=4 SV=1)

HSP 1 Score: 132 bits (332), Expect = 2.01e-33
Identity = 96/271 (35.42%), Postives = 143/271 (52.77%), Query Frame = 0

Query: 1   TRLMGQDGLCLDSDGTSRY-----NFP-KLVPCNPKEERQVWNIVDDGTIHWTNDR-CLF 60
           T L+G+DGLCL+      Y     NFP +L+PC+ K++ Q+W +V DGTI   NDR CL 
Sbjct: 39  THLVGRDGLCLEMVLLRSYKPAGINFPTRLLPCDEKKQTQLWTVVGDGTIRPMNDRFCLA 98

Query: 61  P---YG---KKVTGQYFLVKTGMCDELTQQEKTWSLNNNPNTISHVDSGLVLTVKNYTKT 120
               YG   K V  +        C +++   K W ++ N  TI+  +S +VLT  +   T
Sbjct: 99  ADVFYGVINKAVVSE--------CGKVSDSNKQW-IHKNDGTIALAESRMVLTGDSDYVT 158

Query: 121 LTVVPYKSNNPSQIWAIQEA--PRVGLIMGLHNYKCLWSDGPHRSGQVFVHDCLAGTWFN 180
           L  + Y    PSQ W + E+  P V  I  L+N  CL S     S  V ++ C   T + 
Sbjct: 159 LQSIKY---TPSQSWEVTESLNPMVANIEWLNNL-CLQSTDD--SSNVGLNGCNTYTKY- 218

Query: 181 QVWALFHDGSIRLESDRSLCLTSSSGAAPYFFVDVFKCEDKAEQRWVVETDGGAIHHPGS 240
           Q WAL+ DG+IR   +R+ CLTS         V V KCEDK +QRW +      I HP +
Sbjct: 219 QRWALYADGTIRQHVNRNYCLTSEQNYDRS--VVVSKCEDKPQQRWSLNAKDSTIDHPNT 278

Query: 241 DLVMDVIPMSNQPQPVVLFSQN--GATTQQW 254
           ++V+DV+ + +   P+V+ + +  G+ +Q+W
Sbjct: 279 NMVLDVLNVLDSASPLVIVTNHPDGSASQRW 291

BLAST of MC10g0434 vs. ExPASy TrEMBL
Match: A0A0A0L756 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G219180 PE=4 SV=1)

HSP 1 Score: 131 bits (330), Expect = 3.46e-33
Identity = 98/264 (37.12%), Postives = 135/264 (51.14%), Query Frame = 0

Query: 1   TRLMGQDGLCLDSDGT--SRYNFP-KLVPCNP-KEERQVWNIVDDGTIHWTNDR-CLFPY 60
           T L+G+DGLCL+         NFP +L PCN  K++ Q+W ++ D TI   NDR CL  Y
Sbjct: 35  THLVGRDGLCLEMSPWFYKGSNFPTRLSPCNEQKKQTQLWTVLQDETIRPMNDRYCLVSY 94

Query: 61  GKKVTGQYFL-VKTGMCDELTQQEKTWSLNNNPNTISHVDSGLVLTVKNYTKTLTVVPYK 120
              V+  +   V    C +     K W ++    TI HV SG+VLT  +   T   V   
Sbjct: 95  ---VSVNFITNVVVSECAKEPHSNKKW-IHKEDRTIVHVGSGMVLTGNSNYVT---VQRN 154

Query: 121 SNNPSQIWAIQEA--PRVGLIMGLHNYKCLWSDGPHRSGQVFVHDCLAGTWFNQVWALFH 180
            N PSQ W   ++  P V  I  L N  CL S     S  V +  C +    +Q W+L+ 
Sbjct: 155 KNAPSQSWEATKSLTPMVANIKWLENL-CLQS--TKDSNYVQLDGCNSEN-KSQHWSLYG 214

Query: 181 DGSIRLESDRSLCLTSSSGAAPYFFVDVFKCEDKAEQRWVVETDGGAIHHPGSDLVMDV- 240
           DG+IR   +R+ CLTS        FV V KCEDK +QRW +  +   I+HP +D+VMDV 
Sbjct: 215 DGTIRKHVNRNYCLTSEQDFGR--FVAVSKCEDKPQQRWGLGAEDNTINHPNTDMVMDVL 274

Query: 241 -IPMSNQPQPVVLFSQNGATTQQW 254
            +P  + P  VV   ++G  TQ+W
Sbjct: 275 SVPFDDLPLAVVTNHRDGTATQRW 285

BLAST of MC10g0434 vs. ExPASy TrEMBL
Match: A0A0A0L9D1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G217160 PE=4 SV=1)

HSP 1 Score: 130 bits (327), Expect = 1.07e-32
Identity = 96/265 (36.23%), Postives = 139/265 (52.45%), Query Frame = 0

Query: 1   TRLMGQDGLCLDSDGTSR---YNFP-KLVPCNPKEERQVWNIVDDGTIHWTNDR-CLFPY 60
           T L+G+DGLCL+     +    NFP +L PC+ K++ Q+W IV DGTI   ND+ CL   
Sbjct: 39  THLVGRDGLCLEMSPWYKPAGINFPTRLSPCDEKKQTQLWTIVGDGTIRPMNDKFCLAA- 98

Query: 61  GKKVTGQYFLVKTGMCDELTQQEKTWSLNNNPNTISHVDSGLVLTVKNYTKTLTVVPYKS 120
            +   G         C +++   K W+  N+  TI+ VDS +VL     T  L  V  +S
Sbjct: 99  -EVFYGVINKAVVSECGKVSDPNKKWTQKND-GTIALVDSRMVL-----TGDLDYVTLQS 158

Query: 121 NN--PSQIWAIQEA--PRVGLIMGLHNYKCLWSDGPHRSGQVFVHDCLAGTWFNQVWALF 180
           N   PSQ W + E+    V  I  L+N  CL S     S  V ++ C     + Q WAL+
Sbjct: 159 NKYTPSQSWEVTESLNSMVANIEWLNNL-CLQSTDD--SSHVGLNGCNTDNKY-QRWALY 218

Query: 181 HDGSIRLESDRSLCLTSSSGAAPYFFVDVFKCEDKAEQRWVVETDGGAIHHPGSDLVMDV 240
            DG+IR   +++ CLTS        FV V KCEDK +QRW ++     I HP +D+V+DV
Sbjct: 219 ADGTIRQHVNKNYCLTSDQDFGR--FVVVSKCEDKPQQRWSLDAKDYTIDHPNTDMVLDV 278

Query: 241 --IPMSNQPQPVVLFSQNGATTQQW 254
             +P S  P  +V   ++G+ +Q+W
Sbjct: 279 FSVPDSTFPSVLVTNRRDGSASQRW 289

BLAST of MC10g0434 vs. ExPASy TrEMBL
Match: Q9SLV9 (XSP30 OS=Cucumis sativus OX=3659 GN=XSP30 PE=2 SV=1)

HSP 1 Score: 130 bits (327), Expect = 1.07e-32
Identity = 96/265 (36.23%), Postives = 139/265 (52.45%), Query Frame = 0

Query: 1   TRLMGQDGLCLDSDGTSR---YNFP-KLVPCNPKEERQVWNIVDDGTIHWTNDR-CLFPY 60
           T L+G+DGLCL+     +    NFP +L PC+ K++ Q+W IV DGTI   ND+ CL   
Sbjct: 39  THLVGRDGLCLEMSPWYKPAGINFPTRLSPCDEKKQTQLWTIVGDGTIRPMNDKFCLAA- 98

Query: 61  GKKVTGQYFLVKTGMCDELTQQEKTWSLNNNPNTISHVDSGLVLTVKNYTKTLTVVPYKS 120
            +   G         C +++   K W+  N+  TI+ VDS +VL     T  L  V  +S
Sbjct: 99  -EVFYGVINKAVVSECGKVSDPNKKWTQKND-GTIALVDSRMVL-----TGDLDYVTLQS 158

Query: 121 NN--PSQIWAIQEA--PRVGLIMGLHNYKCLWSDGPHRSGQVFVHDCLAGTWFNQVWALF 180
           N   PSQ W + E+    V  I  L+N  CL S     S  V ++ C     + Q WAL+
Sbjct: 159 NKYTPSQSWEVTESLNSMVANIEWLNNL-CLQSTDD--SSHVGLNGCNTDNKY-QRWALY 218

Query: 181 HDGSIRLESDRSLCLTSSSGAAPYFFVDVFKCEDKAEQRWVVETDGGAIHHPGSDLVMDV 240
            DG+IR   +++ CLTS        FV V KCEDK +QRW ++     I HP +D+V+DV
Sbjct: 219 ADGTIRQHVNKNYCLTSDQDFGR--FVVVSKCEDKPQQRWSLDAKDYTIDHPNTDMVLDV 278

Query: 241 --IPMSNQPQPVVLFSQNGATTQQW 254
             +P S  P  +V   ++G+ +Q+W
Sbjct: 279 FSVPDSTFPSVLVTNRRDGSASQRW 289

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
O224155.0e-2532.82Ribosome-inactivating protein SNAIf OS=Sambucus nigra OX=4202 GN=SNA-If PE=1 SV=... [more]
Q413581.2e-2332.18Ribosome-inactivating protein SNAI OS=Sambucus nigra OX=4202 GN=SNA-I PE=1 SV=1[more]
Q9M6543.6e-2332.20Ribosome-inactivating protein PMRIPm OS=Polygonatum multiflorum OX=45371 GN=RIPm... [more]
Q9M6532.6e-2131.40Ribosome-inactivating protein PMRIPt OS=Polygonatum multiflorum OX=45371 GN=RIPt... [more]
P028791.1e-1932.21Ricin OS=Ricinus communis OX=3988 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
XP_022149256.11.19e-195100.00ribosome-inactivating protein SNAIf-like [Momordica charantia][more]
XP_004151509.24.16e-3335.42nigrin b [Cucumis sativus] >KGN57577.1 hypothetical protein Csa_010264 [Cucumis ... [more]
XP_004146289.17.15e-3337.12nigrin b [Cucumis sativus] >KGN57583.1 hypothetical protein Csa_010930 [Cucumis ... [more]
NP_001274403.12.22e-3236.23uncharacterized protein LOC101221335 precursor [Cucumis sativus] >KAE8650527.1 h... [more]
XP_038885951.15.86e-3235.14nigrin b-like [Benincasa hispida][more]
Match NameE-valueIdentityDescription
A0A6J1D7U55.75e-196100.00ribosome-inactivating protein SNAIf-like OS=Momordica charantia OX=3673 GN=LOC11... [more]
A0A0A0LAC22.01e-3335.42Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G217140 PE=4 SV=1[more]
A0A0A0L7563.46e-3337.12Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G219180 PE=4 SV=1[more]
A0A0A0L9D11.07e-3236.23Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G217160 PE=4 SV=1[more]
Q9SLV91.07e-3236.23XSP30 OS=Cucumis sativus OX=3659 GN=XSP30 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000772Ricin B, lectin domainSMARTSM00458ricin_3coord: 128..254
e-value: 3.6E-9
score: 46.5
coord: 1..125
e-value: 1.4E-7
score: 41.2
IPR000772Ricin B, lectin domainPFAMPF00652Ricin_B_lectincoord: 131..254
e-value: 9.6E-19
score: 67.9
coord: 6..122
e-value: 1.0E-12
score: 48.4
IPR000772Ricin B, lectin domainPROSITEPS50231RICIN_B_LECTINcoord: 140..254
score: 28.292999
IPR000772Ricin B, lectin domainPROSITEPS50231RICIN_B_LECTINcoord: 1..125
score: 24.774
IPR000772Ricin B, lectin domainCDDcd00161RICINcoord: 2..124
e-value: 2.74001E-10
score: 54.819
IPR000772Ricin B, lectin domainCDDcd00161RICINcoord: 140..254
e-value: 1.53368E-12
score: 60.9822
NoneNo IPR availableGENE3D2.80.10.50coord: 1..125
e-value: 2.1E-21
score: 78.1
NoneNo IPR availableGENE3D2.80.10.50coord: 128..254
e-value: 2.0E-25
score: 91.1
IPR035992Ricin B-like lectinsSUPERFAMILY50370Ricin B-like lectinscoord: 130..254
IPR035992Ricin B-like lectinsSUPERFAMILY50370Ricin B-like lectinscoord: 3..124

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC10g0434.1MC10g0434.1mRNA