MC10g0362 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC10g0362
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC10: 2907618 .. 2907836 (+)
RNA-Seq ExpressionMC10g0362
SyntenyMC10g0362
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGATGAGAAAGAAGGTTGCTTTGTTGGCTATGGTGGTTGTGGTGGTGGTTATGGGTCAATCGGCCACCGCGGCCGCCGCCGTAGAGGAAGGGATTCAGCTGCCGGCGTCGGATTACAACACGCCACCGCCTGAAAGAATCTGCCCTGTTATGATATTGCCATGCAAAACTGACTCCGAATGCTCTCCATGCTATTGTGTCAATGGGTCCTGTGTT

mRNA sequence

ATGGAGATGAGAAAGAAGGTTGCTTTGTTGGCTATGGTGGTTGTGGTGGTGGTTATGGGTCAATCGGCCACCGCGGCCGCCGCCGTAGAGGAAGGGATTCAGCTGCCGGCGTCGGATTACAACACGCCACCGCCTGAAAGAATCTGCCCTGTTATGATATTGCCATGCAAAACTGACTCCGAATGCTCTCCATGCTATTGTGTCAATGGGTCCTGTGTT

Coding sequence (CDS)

ATGGAGATGAGAAAGAAGGTTGCTTTGTTGGCTATGGTGGTTGTGGTGGTGGTTATGGGTCAATCGGCCACCGCGGCCGCCGCCGTAGAGGAAGGGATTCAGCTGCCGGCGTCGGATTACAACACGCCACCGCCTGAAAGAATCTGCCCTGTTATGATATTGCCATGCAAAACTGACTCCGAATGCTCTCCATGCTATTGTGTCAATGGGTCCTGTGTT

Protein sequence

MEMRKKVALLAMVVVVVVMGQSATAAAAVEEGIQLPASDYNTPPPERICPVMILPCKTDSECSPCYCVNGSCV
Homology
BLAST of MC10g0362 vs. NCBI nr
Match: KGN52766.1 (hypothetical protein Csa_015422 [Cucumis sativus])

HSP 1 Score: 106 bits (265), Expect = 2.79e-28
Identity = 55/77 (71.43%), Postives = 66/77 (85.71%), Query Frame = 0

Query: 1  MEMRKKVALLAMVVVVVVMGQSATAAAAVEEGIQLP----ASDYNTPPPERICPVMILPC 60
          MEM+ KVAL+AMVVV+VVM +SAT  AA++EGI+LP    AS Y+TPPP R+CP+MILPC
Sbjct: 1  MEMKNKVALVAMVVVMVVMTRSATVTAAMDEGIELPTNGEASYYDTPPPPRVCPIMILPC 60

Query: 61 KTDSECSPCYCVNGSCV 73
          KTDSECSPCYC NGSC+
Sbjct: 61 KTDSECSPCYCNNGSCI 77

BLAST of MC10g0362 vs. NCBI nr
Match: KAA0044341.1 (hypothetical protein E6C27_scaffold46G00670 [Cucumis melo var. makuwa])

HSP 1 Score: 64.7 bits (156), Expect = 9.41e-12
Identity = 40/75 (53.33%), Postives = 49/75 (65.33%), Query Frame = 0

Query: 1  MEMRKKVALLAMVVVVVVMGQSATAAAAVEEGIQLPASDYNTPPPERICPVMILPCKTDS 60
          MEM+ K AL+AMVV +VVM QS T   A +E I+L   +       R+CP  ILPCKTDS
Sbjct: 1  MEMKNKAALVAMVVFMVVMAQSVTTITA-DETIELSGGENTA----RVCPATILPCKTDS 60

Query: 61 ECSPCYC--VNGSCV 73
          ECSPC C   +GSC+
Sbjct: 61 ECSPCICNLQSGSCI 70

BLAST of MC10g0362 vs. NCBI nr
Match: TYK29470.1 (hypothetical protein E5676_scaffold655G00670 [Cucumis melo var. makuwa])

HSP 1 Score: 63.5 bits (153), Expect = 2.69e-11
Identity = 39/75 (52.00%), Postives = 49/75 (65.33%), Query Frame = 0

Query: 1  MEMRKKVALLAMVVVVVVMGQSATAAAAVEEGIQLPASDYNTPPPERICPVMILPCKTDS 60
          MEM+ K AL+AMVV +VVM QS T   A +E I++   +       R+CP  ILPCKTDS
Sbjct: 1  MEMKNKAALVAMVVFMVVMAQSVTTITA-DETIEVSGGENTA----RVCPATILPCKTDS 60

Query: 61 ECSPCYC--VNGSCV 73
          ECSPC C   +GSC+
Sbjct: 61 ECSPCICNLQSGSCI 70

BLAST of MC10g0362 vs. NCBI nr
Match: KGN52767.1 (hypothetical protein Csa_015168 [Cucumis sativus])

HSP 1 Score: 61.6 bits (148), Expect = 1.55e-10
Identity = 38/75 (50.67%), Postives = 49/75 (65.33%), Query Frame = 0

Query: 1  MEMRKKVALLAMVVVVVVMGQSATAAAAVEEGIQLPASDYNTPPPERICPVMILPCKTDS 60
          MEM+ K AL+AMVV +VVM QS T   A +E I+L   +       R+CP  +LPC+TDS
Sbjct: 1  MEMKNKAALVAMVVFMVVMAQSVTTITA-DETIELSGGENTA----RVCPATLLPCETDS 60

Query: 61 ECSPCYC--VNGSCV 73
          ECSPC C   +G+CV
Sbjct: 61 ECSPCICNVKSGACV 70

BLAST of MC10g0362 vs. ExPASy TrEMBL
Match: A0A0A0KY39 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000850 PE=4 SV=1)

HSP 1 Score: 106 bits (265), Expect = 1.35e-28
Identity = 55/77 (71.43%), Postives = 66/77 (85.71%), Query Frame = 0

Query: 1  MEMRKKVALLAMVVVVVVMGQSATAAAAVEEGIQLP----ASDYNTPPPERICPVMILPC 60
          MEM+ KVAL+AMVVV+VVM +SAT  AA++EGI+LP    AS Y+TPPP R+CP+MILPC
Sbjct: 1  MEMKNKVALVAMVVVMVVMTRSATVTAAMDEGIELPTNGEASYYDTPPPPRVCPIMILPC 60

Query: 61 KTDSECSPCYCVNGSCV 73
          KTDSECSPCYC NGSC+
Sbjct: 61 KTDSECSPCYCNNGSCI 77

BLAST of MC10g0362 vs. ExPASy TrEMBL
Match: A0A5A7TRY5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G00670 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 4.55e-12
Identity = 40/75 (53.33%), Postives = 49/75 (65.33%), Query Frame = 0

Query: 1  MEMRKKVALLAMVVVVVVMGQSATAAAAVEEGIQLPASDYNTPPPERICPVMILPCKTDS 60
          MEM+ K AL+AMVV +VVM QS T   A +E I+L   +       R+CP  ILPCKTDS
Sbjct: 1  MEMKNKAALVAMVVFMVVMAQSVTTITA-DETIELSGGENTA----RVCPATILPCKTDS 60

Query: 61 ECSPCYC--VNGSCV 73
          ECSPC C   +GSC+
Sbjct: 61 ECSPCICNLQSGSCI 70

BLAST of MC10g0362 vs. ExPASy TrEMBL
Match: A0A5D3E1Q5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G00670 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 1.30e-11
Identity = 39/75 (52.00%), Postives = 49/75 (65.33%), Query Frame = 0

Query: 1  MEMRKKVALLAMVVVVVVMGQSATAAAAVEEGIQLPASDYNTPPPERICPVMILPCKTDS 60
          MEM+ K AL+AMVV +VVM QS T   A +E I++   +       R+CP  ILPCKTDS
Sbjct: 1  MEMKNKAALVAMVVFMVVMAQSVTTITA-DETIEVSGGENTA----RVCPATILPCKTDS 60

Query: 61 ECSPCYC--VNGSCV 73
          ECSPC C   +GSC+
Sbjct: 61 ECSPCICNLQSGSCI 70

BLAST of MC10g0362 vs. ExPASy TrEMBL
Match: A0A0A0KWE9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000860 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 7.50e-11
Identity = 38/75 (50.67%), Postives = 49/75 (65.33%), Query Frame = 0

Query: 1  MEMRKKVALLAMVVVVVVMGQSATAAAAVEEGIQLPASDYNTPPPERICPVMILPCKTDS 60
          MEM+ K AL+AMVV +VVM QS T   A +E I+L   +       R+CP  +LPC+TDS
Sbjct: 1  MEMKNKAALVAMVVFMVVMAQSVTTITA-DETIELSGGENTA----RVCPATLLPCETDS 60

Query: 61 ECSPCYC--VNGSCV 73
          ECSPC C   +G+CV
Sbjct: 61 ECSPCICNVKSGACV 70

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KGN52766.12.79e-2871.43hypothetical protein Csa_015422 [Cucumis sativus][more]
KAA0044341.19.41e-1253.33hypothetical protein E6C27_scaffold46G00670 [Cucumis melo var. makuwa][more]
TYK29470.12.69e-1152.00hypothetical protein E5676_scaffold655G00670 [Cucumis melo var. makuwa][more]
KGN52767.11.55e-1050.67hypothetical protein Csa_015168 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
A0A0A0KY391.35e-2871.43Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000850 PE=4 SV=1[more]
A0A5A7TRY54.55e-1253.33Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3E1Q51.30e-1152.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0KWE97.50e-1150.67Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000860 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC10g0362.1MC10g0362.1mRNA