MC10g0132 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC10g0132
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionRemorin_C domain-containing protein
LocationMC10: 961974 .. 962159 (+)
RNA-Seq ExpressionMC10g0132
SyntenyMC10g0132
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGATGAAGCAGGAGGAATTTGAAAGGGTAAGAAATAAAGTATTAGACGCACATATAACAACAGAATCAAAGAAAGCAAACATTGAGGTTGAGAGAAATCGTCAAAAACAGAAGATTGAAGAGAAAATTGCTCAACATCGCTCTCCCAATACAATTCCATCCAAGTTTTTTGGCATTTTCAAAGAC

mRNA sequence

AAGATGAAGCAGGAGGAATTTGAAAGGGTAAGAAATAAAGTATTAGACGCACATATAACAACAGAATCAAAGAAAGCAAACATTGAGGTTGAGAGAAATCGTCAAAAACAGAAGATTGAAGAGAAAATTGCTCAACATCGCTCTCCCAATACAATTCCATCCAAGTTTTTTGGCATTTTCAAAGAC

Coding sequence (CDS)

AAGATGAAGCAGGAGGAATTTGAAAGGGTAAGAAATAAAGTATTAGACGCACATATAACAACAGAATCAAAGAAAGCAAACATTGAGGTTGAGAGAAATCGTCAAAAACAGAAGATTGAAGAGAAAATTGCTCAACATCGCTCTCCCAATACAATTCCATCCAAGTTTTTTGGCATTTTCAAAGAC

Protein sequence

KMKQEEFERVRNKVLDAHITTESKKANIEVERNRQKQKIEEKIAQHRSPNTIPSKFFGIFKD
Homology
BLAST of MC10g0132 vs. NCBI nr
Match: KAA0033641.1 (remorin-like [Cucumis melo var. makuwa] >TYK22940.1 remorin-like [Cucumis melo var. makuwa])

HSP 1 Score: 55.5 bits (132), Expect = 2.87e-08
Identity = 28/62 (45.16%), Postives = 41/62 (66.13%), Query Frame = 0

Query: 1  KMKQEEFERVRNKVLDAHITTESKKANIEVERNRQKQKIEEKIAQHRSPNTIPSKFFGIF 60
          K++ +E E+V+NK  + H   ESKKA+IE +R  +K K+E++   HR  NT+P K FGI 
Sbjct: 11 KLRLKEMEKVKNKEAETHKAVESKKASIEAKRELRKLKVEDRAKMHRCTNTVPKKCFGIC 70

Query: 61 KD 62
           D
Sbjct: 71 ND 72

BLAST of MC10g0132 vs. NCBI nr
Match: KGN57373.1 (hypothetical protein Csa_010046 [Cucumis sativus])

HSP 1 Score: 51.2 bits (121), Expect = 4.28e-06
Identity = 27/56 (48.21%), Postives = 35/56 (62.50%), Query Frame = 0

Query: 7   FERVRNKVLDAHITTESKKANIEVERNRQKQKIEEKIAQHRSPNTIPSKFFGIFKD 62
            E+V+NK  + H   ESKKA+IE +R  +K K+E K   HR  NT+P K FGI  D
Sbjct: 71  MEKVKNKEAETHKAVESKKASIEAKRELKKLKVEGKAKVHRCTNTVPKKCFGICND 126

BLAST of MC10g0132 vs. NCBI nr
Match: TYK22939.1 (remorin [Cucumis melo var. makuwa])

HSP 1 Score: 49.3 bits (116), Expect = 3.22e-05
Identity = 28/61 (45.90%), Postives = 37/61 (60.66%), Query Frame = 0

Query: 1   KMKQEEFERVRNKVLDAHITTESKKANIEVERNRQKQKIEEKIAQHRSPNTIPSKFFGIF 60
           K K E  E+++NK+   H T E KKA IE +R  +K K EE  A+HR+  T P K FG F
Sbjct: 83  KKKGEYIEKMKNKIALIHKTAEEKKAVIEAKRGEEKLKAEEIAAKHRATGTAPKKIFGCF 142

BLAST of MC10g0132 vs. NCBI nr
Match: XP_008439225.1 (PREDICTED: remorin [Cucumis melo])

HSP 1 Score: 49.3 bits (116), Expect = 6.31e-05
Identity = 28/61 (45.90%), Postives = 37/61 (60.66%), Query Frame = 0

Query: 1   KMKQEEFERVRNKVLDAHITTESKKANIEVERNRQKQKIEEKIAQHRSPNTIPSKFFGIF 60
           K K E  E+++NK+   H T E KKA IE +R  +K K EE  A+HR+  T P K FG F
Sbjct: 141 KKKGEYIEKMKNKIALIHKTAEEKKAVIEAKRGEEKLKAEEIAAKHRATGTAPKKIFGCF 200

BLAST of MC10g0132 vs. NCBI nr
Match: KAA0033640.1 (remorin [Cucumis melo var. makuwa])

HSP 1 Score: 49.3 bits (116), Expect = 6.31e-05
Identity = 28/61 (45.90%), Postives = 37/61 (60.66%), Query Frame = 0

Query: 1   KMKQEEFERVRNKVLDAHITTESKKANIEVERNRQKQKIEEKIAQHRSPNTIPSKFFGIF 60
           K K E  E+++NK+   H T E KKA IE +R  +K K EE  A+HR+  T P K FG F
Sbjct: 141 KKKGEYIEKMKNKIALIHKTAEEKKAVIEAKRGEEKLKAEEIAAKHRATGTAPKKIFGCF 200

BLAST of MC10g0132 vs. ExPASy TrEMBL
Match: A0A5D3DHT0 (Remorin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold386G00180 PE=4 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 1.39e-08
Identity = 28/62 (45.16%), Postives = 41/62 (66.13%), Query Frame = 0

Query: 1  KMKQEEFERVRNKVLDAHITTESKKANIEVERNRQKQKIEEKIAQHRSPNTIPSKFFGIF 60
          K++ +E E+V+NK  + H   ESKKA+IE +R  +K K+E++   HR  NT+P K FGI 
Sbjct: 11 KLRLKEMEKVKNKEAETHKAVESKKASIEAKRELRKLKVEDRAKMHRCTNTVPKKCFGIC 70

Query: 61 KD 62
           D
Sbjct: 71 ND 72

BLAST of MC10g0132 vs. ExPASy TrEMBL
Match: A0A0A0L6I9 (Remorin_C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G182090 PE=3 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 2.07e-06
Identity = 27/56 (48.21%), Postives = 35/56 (62.50%), Query Frame = 0

Query: 7   FERVRNKVLDAHITTESKKANIEVERNRQKQKIEEKIAQHRSPNTIPSKFFGIFKD 62
            E+V+NK  + H   ESKKA+IE +R  +K K+E K   HR  NT+P K FGI  D
Sbjct: 71  MEKVKNKEAETHKAVESKKASIEAKRELKKLKVEGKAKVHRCTNTVPKKCFGICND 126

BLAST of MC10g0132 vs. ExPASy TrEMBL
Match: A0A5D3DI57 (Remorin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold386G00170 PE=3 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 1.56e-05
Identity = 28/61 (45.90%), Postives = 37/61 (60.66%), Query Frame = 0

Query: 1   KMKQEEFERVRNKVLDAHITTESKKANIEVERNRQKQKIEEKIAQHRSPNTIPSKFFGIF 60
           K K E  E+++NK+   H T E KKA IE +R  +K K EE  A+HR+  T P K FG F
Sbjct: 83  KKKGEYIEKMKNKIALIHKTAEEKKAVIEAKRGEEKLKAEEIAAKHRATGTAPKKIFGCF 142

BLAST of MC10g0132 vs. ExPASy TrEMBL
Match: A0A5A7SRU5 (Remorin OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold239G00800 PE=3 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 3.06e-05
Identity = 28/61 (45.90%), Postives = 37/61 (60.66%), Query Frame = 0

Query: 1   KMKQEEFERVRNKVLDAHITTESKKANIEVERNRQKQKIEEKIAQHRSPNTIPSKFFGIF 60
           K K E  E+++NK+   H T E KKA IE +R  +K K EE  A+HR+  T P K FG F
Sbjct: 141 KKKGEYIEKMKNKIALIHKTAEEKKAVIEAKRGEEKLKAEEIAAKHRATGTAPKKIFGCF 200

BLAST of MC10g0132 vs. ExPASy TrEMBL
Match: A0A1S3AXW2 (remorin OS=Cucumis melo OX=3656 GN=LOC103484075 PE=3 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 3.06e-05
Identity = 28/61 (45.90%), Postives = 37/61 (60.66%), Query Frame = 0

Query: 1   KMKQEEFERVRNKVLDAHITTESKKANIEVERNRQKQKIEEKIAQHRSPNTIPSKFFGIF 60
           K K E  E+++NK+   H T E KKA IE +R  +K K EE  A+HR+  T P K FG F
Sbjct: 141 KKKGEYIEKMKNKIALIHKTAEEKKAVIEAKRGEEKLKAEEIAAKHRATGTAPKKIFGCF 200

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAA0033641.12.87e-0845.16remorin-like [Cucumis melo var. makuwa] >TYK22940.1 remorin-like [Cucumis melo v... [more]
KGN57373.14.28e-0648.21hypothetical protein Csa_010046 [Cucumis sativus][more]
TYK22939.13.22e-0545.90remorin [Cucumis melo var. makuwa][more]
XP_008439225.16.31e-0545.90PREDICTED: remorin [Cucumis melo][more]
KAA0033640.16.31e-0545.90remorin [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
A0A5D3DHT01.39e-0845.16Remorin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold386G00180 P... [more]
A0A0A0L6I92.07e-0648.21Remorin_C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G182090 P... [more]
A0A5D3DI571.56e-0545.90Remorin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold386G00170 PE=3 S... [more]
A0A5A7SRU53.06e-0545.90Remorin OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold239G00800 PE=3 S... [more]
A0A1S3AXW23.06e-0545.90remorin OS=Cucumis melo OX=3656 GN=LOC103484075 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 25..45

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC10g0132.1MC10g0132.1mRNA