MC10g0077 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC10g0077
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	RNA polymerase sigma factor sigE
Location	MC10: 491841 .. 496608 (-)
RNA-Seq Expression	MC10g0077
Synteny	MC10g0077

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5polypeptideCDSutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTAATAAAAAAATAAAAAAAAAGTAGGAACAATGATGTAACATTCAAAAGTTGAAGGACCTAATAACTACAATATTGGAAACGCCTATTAAATTTTTCGAGGAAATAATTCTTTCCCTTCTCCAATTTCACACCCCTTTTCTAAATTCTAATAAGGACAAAAGAGAGAGAGAAATAAAGGAAATAATTGTAATTGTATGGCTGCCCTTTTAAGCAACGTGTAGGGCTCGAAACCATTACAGCCAGTTGGGTCCCATCAAGGTTGATACTCCAGAGCCAATTAGAACCACATGTCTGTCACTTACATAATCCATTAACTTCCCCAAAAATATCTTGTCCTCCACTCCTCTGCTGCCACGTAATCAACCCCTCTGCTCTAACAGTGACCACGTCACCTACGCTGTTTTAGTCCACTTTCCTTTGCCCACGTCGCTGCTCTCTTCACCGTTGATGGATCAGAAACCCCTTCATCACCGTCCCCTTTCTGTTAATTAAAACTCAGATTGTTTGTGGACACCGAAATTCATGCATATAGCAGACTCAGACTGACATTTTTAAGCTCCTTCTCTTACAATCCTGGGAAACAAAAGAAAATTCAAGCAAAAAATCTGTGCTTTCGCCAAACTTGGAATTACGTACTTTGATTTTTAAAAGGTTTGTGTTCTAAACTTGGTTCTTTTTCTGTCTGCTAAGTTGGTTGATGTTGTATCTACTGTTTGTTTTCTTTTTCTTTTGTTCTGTGAAATTCTTGTCTGCTATGGAATGCCTACAGAATCTTGATCTTTGTGGGAAAAGCAGCTATTTACTTGAACAATGGTTTATTGATCATTTGTTGAACTCTCGTGTGTCTATAACATGCATAAACAAGTAAATTTTAAAGCTTTGTAATCCCAGTTTCCAACAGTGAAAGACGATGAAGTTAATGTAGGTAGGACTTTTTGATGTTTACTTGTAAGGAAAACCAATGGCTTCAGATTGTTGTGGTGGTAGCTATGTACTAAACTAGAAAAGTGGCATCAATTTGAGCTGCGATGTCTATAGCTAAATGCAGCAAAATGGAAAGGGATACTTCTAAGATGCTTATGACTTGTTGGTGAACTGCCCCTGGGGAGATTTTAGTTCTCTCTGGTGAAGATTTTTGGCCAATGCGTTGTTTCAAGTCTAGGATTAGAGTAAATCCTAACAAAGAGTTGCATTTACCATTTATTGCAGGGTTCAGAAGCTTCCATATTAATTTCTTTTGCTTTTTTGAAGGCTACTTGGCATGGGAGTTGTGACTGTTTCGAGCTCGGCAGCACGAACTCCTCTTCGGCTGGGCGCAAAATTTTCCAATCACAATTCTACATTGAAAAGACCAACGATTGTGGCATTTAAAGCAGATAAGCACACTAACACTACTTTGGTCTCACCCCACGAGCAAGTAACCCTACCTGTGGAGAGTAATAACAGAACCAAGAAAAGATCAGGAAAAACTAGCAAGTCTTTGAAGAGAGTTAAAGCTGTCTTTACCGATGAAGCTTCTCCCTGTACTTCGGAAGTGGATTACAATGAGGCAGCTGCCAAACTTGAAAATATATTCAATCTTAGCCCTATGACAGATGATACTGATGTGGAAAGTAAAGATGGCAGGTTGAGAAGCGGTCAGCAGAGGAGGAAGAAATCAGACAAGAGATCAGGTGATGGCATTATCAGGAACCAGACTAAGAGGATTAAGCGACTAGATCTCGACAAGAGGATAGCATTGAAAAATAACAAGGAAGATAAAGCAGCTCCTTCATTAAAGAAACAAAAGGAGACCAAAAACGAGGCTGATGAGATTGATGATCTTGTTAGAGACTACTCTGCTTCAACTGACTTGGTTAGTTTAGACTGGAAAAAAATGAAGATTCCTCCAGTTCTTCCTTCATCGGAGCATACCCGTTTGTTCAAATTGGTTCAACCCATGAAGGTGAGGCTTCTCCTTCTGCAAGAAGTTTGATCATATTTGTTCTACACTAATATGAATGTAAGTTTGAAGTAAAGGCTATTCTTGTTCACTTCCTAGTAACGTTTTCCACTATCAGGCTCTTATTCAAGTACAAGAAGATCTGCAGAAAGAATTGGGCAGAGAACCAACTGAAGGTGAACTGGCGAATGCGACAAATATGAATGTGGTTCAAGTAAGGAGACAATTGGAGGTTGGTCGTGCTGCCAGAAACAAGCTCATCAAGGTAAGGATGATTTCCTTCCACAGTTAAAACATTATTGCTTCATGCTTCTGTACTACCATGACAGATTTCAGTATGGCATTCAAGAACTATGTTCAATGCCTTTAATTTAGGTTCCTAGAATATGTATTTATCTTCGGTAACATGTTGAAGTGCCAATAGATTGACTATAGCAGTAATCTGACTTATGTTATATGTGTGCTGCCTACTGTGGAAAGGATGGAACTAATGATTATATCTTACATGTGTTGCAGCATAACCTTCGCCTTGTATTGTTCGTGATCAATAAATACTTTGAAGATTTTGCAAGTGGCCCGAAATTTCAAGACCTTTGTCAAGCAGGAGTCAAGGGACTCATTACAGCAATTGATCGCTTTGAGCCAAAGAGGAGATTCCGACTGTCAACCTATGCTTTATTCTGGATAAGGCATGCTATTATTCGGTCAATGACTCTCTCAAGCTTCACACGCGTCTCATTTGGACTTGACTCGGTAGGTTCTTAATCAACTGTGGCTTTTTCGTACCTTACTTCTCTATATTAGCAATGGATTACTCTCATTCCTAATCGTCATACTACTTTCAAGTCATAACATCACATTGTCGCTGCTATATGTAGAACAACCAAAGAAGTTATTACCTTAAACAAGAGGAAACAAAGAGCAATACCAGAAGGGTAATAGGGAATATTTAGACTTTGAAGGAAAACTAAAATGTCTAGAGGGCTTGATCTTGACACCTCTAAGAAATAATTACATAAGAAAATAGAAGATTGGAAAATAAAAGACCAAGAAAAATTCGGAGGTCTAGATTCTAGCCACTATCTAAAGGGGAAGGAAGGTTCTCTTTCCATCTAGTTGTATTTCAAAAGGGAAGGTTTGTCTCTTTAAATTTAGTAGCTCTGCATTTGGACTGGCTGAATTAGCAATCGTGCTAAAGTAGCAGGAAATTTTATGAAGCAAGCTTACAAGAATAGAGTACAAGAATTTTTTTACCGTTCCATATTGACGTTAATTTAATAGTTGAATTGAATCTGTTCATTTTGCTGTATTTTGAATCCAAAACATCGCTTAAATGGTTCCTTGCACACATGGTGGCATGGATTATTGAGATTGGACCTTCTCTAGTGCAGGTAAGAGTTGAAATCCAAAGAGCTAAACTTGAGTTATTATTTGAGCTTCATAGATTACCAACAGAGGAAGAGATAGTTGCAAAAGTTGGCATCTCACCTGAGAGGTATCTTGAAGTAATGAGGGCTACGAAACCTGTTTACTCTCTCCACTCTAGGCATGCAACTACATCAGAAGAGTTTATCAATGGGATCACTGATGTAGAAGGTGCTGGAGGTGACAACCGGAGGCAACCAGCTCTTCTGAGGCTTGCTCTTGACGATGTGGTAATTTCTTTTTAATCTTGTAGACACATTTCTTTCCTCATCCAAACCAATTCATTAATCATCTGACAAAAATCTCCAATCTTCTACAATGGCTTTTGCATACAGCCAGAGACACTTTCTTCCATATTTGAAGAGAAATATGTGTCATCTTTGCTTCCATGATTTAACTTGTGAAATATATTTGGTAAAATGTCTTGTTTGAGATGTAACTGACTTGAGCTACACTACACTATTTGTCCCAAATCAACATAAACGTAGACTGTTGTAGTGACATGAACCTCCCTTCTGCTAGATTTCTTAGGCATTCCTGACTTAGGTTTACTTTTAACTCAAATTGTTCATCATATCAGTGGATACGAACTACTCTTTCTGCTGCATTATTTGATGGGATGCGTCGTGATGCCTTAAACTGTCCATATTTATAATCCTTAGTAACTTGTTGTGATAACTCTCTTCCAGCTTGATTCTCTTAAGCCTAAGGAGAGCTTGGTGATCAGACAAAGATATGGTCTCGATGGCAAAGGAAACCGAACATTAGGTGAGATAGCCGGAAATTTAAATATTTCAAGAGAAATGGTTCGAAAGCATGAAGTCAAAGCTCTCATGAAGCTGAAGCATCCTGCAAGAGTGGATTATCTTCGTCGGTACTTAATCTGAACTGATGAGAACATCATGCTTTGTTTCAATGATCTTGTACTCTGGATAATTTCCTATCGCCAAAACATCTCGAGGGGCAAGAGATATGTACCATATATTTGTAACTACTTGAATATAGAAACCTCACACCATATGATTCATATTTTAACGGACATACAATTGGCAGCTCTGCTACTTTCATTTCGGAAGATGGCAGTTTGATAGGAGAAGAACAGCAACTAAACAACAGGAATGGTTATACTCTTGTATACATAGCATGTGATATAAATATATATACTGTTTATAACATTACACCCTTTTGACCGTTTTCTAAGTTTTTTGCAGCAGAAACCATGCAAAGGAAAGATCAGAACCTATGGTTTTTTGTTTCATTTTTCCTCTTTAGAGGAAGAAACTTCTTTAGCCATTAGTATCAACTGGAAAATGGCCACAACTGTTTCTTTTTAAATTTGTCTAGAGTTGGGAGTCACTGAAATTACCTATATAAAATTGTTGGAAATGAATTTATTC

mRNA sequence

CTTTAATAAAAAAATAAAAAAAAAGTAGGAACAATGATGTAACATTCAAAAGTTGAAGGACCTAATAACTACAATATTGGAAACGCCTATTAAATTTTTCGAGGAAATAATTCTTTCCCTTCTCCAATTTCACACCCCTTTTCTAAATTCTAATAAGGACAAAAGAGAGAGAGAAATAAAGGAAATAATTGTAATTGTATGGCTGCCCTTTTAAGCAACGTGTAGGGCTCGAAACCATTACAGCCAGTTGGGTCCCATCAAGGTTGATACTCCAGAGCCAATTAGAACCACATGTCTGTCACTTACATAATCCATTAACTTCCCCAAAAATATCTTGTCCTCCACTCCTCTGCTGCCACGTAATCAACCCCTCTGCTCTAACAGTGACCACGTCACCTACGCTGTTTTAGTCCACTTTCCTTTGCCCACGTCGCTGCTCTCTTCACCGTTGATGGATCAGAAACCCCTTCATCACCGTCCCCTTTCTGTTAATTAAAACTCAGATTGTTTGTGGACACCGAAATTCATGCATATAGCAGACTCAGACTGACATTTTTAAGCTCCTTCTCTTACAATCCTGGGAAACAAAAGAAAATTCAAGCAAAAAATCTGTGCTTTCGCCAAACTTGGAATTACGTACTTTGATTTTTAAAAGGCTACTTGGCATGGGAGTTGTGACTGTTTCGAGCTCGGCAGCACGAACTCCTCTTCGGCTGGGCGCAAAATTTTCCAATCACAATTCTACATTGAAAAGACCAACGATTGTGGCATTTAAAGCAGATAAGCACACTAACACTACTTTGGTCTCACCCCACGAGCAAGTAACCCTACCTGTGGAGAGTAATAACAGAACCAAGAAAAGATCAGGAAAAACTAGCAAGTCTTTGAAGAGAGTTAAAGCTGTCTTTACCGATGAAGCTTCTCCCTGTACTTCGGAAGTGGATTACAATGAGGCAGCTGCCAAACTTGAAAATATATTCAATCTTAGCCCTATGACAGATGATACTGATGTGGAAAGTAAAGATGGCAGGTTGAGAAGCGGTCAGCAGAGGAGGAAGAAATCAGACAAGAGATCAGGTGATGGCATTATCAGGAACCAGACTAAGAGGATTAAGCGACTAGATCTCGACAAGAGGATAGCATTGAAAAATAACAAGGAAGATAAAGCAGCTCCTTCATTAAAGAAACAAAAGGAGACCAAAAACGAGGCTGATGAGATTGATGATCTTGTTAGAGACTACTCTGCTTCAACTGACTTGGTTAGTTTAGACTGGAAAAAAATGAAGATTCCTCCAGTTCTTCCTTCATCGGAGCATACCCGTTTGTTCAAATTGGTTCAACCCATGAAGGCTCTTATTCAAGTACAAGAAGATCTGCAGAAAGAATTGGGCAGAGAACCAACTGAAGGTGAACTGGCGAATGCGACAAATATGAATGTGGTTCAAGTAAGGAGACAATTGGAGGTTGGTCGTGCTGCCAGAAACAAGCTCATCAAGCATAACCTTCGCCTTGTATTGTTCGTGATCAATAAATACTTTGAAGATTTTGCAAGTGGCCCGAAATTTCAAGACCTTTGTCAAGCAGGAGTCAAGGGACTCATTACAGCAATTGATCGCTTTGAGCCAAAGAGGAGATTCCGACTGTCAACCTATGCTTTATTCTGGATAAGGCATGCTATTATTCGGTCAATGACTCTCTCAAGCTTCACACGCGTCTCATTTGGACTTGACTCGGTAAGAGTTGAAATCCAAAGAGCTAAACTTGAGTTATTATTTGAGCTTCATAGATTACCAACAGAGGAAGAGATAGTTGCAAAAGTTGGCATCTCACCTGAGAGGTATCTTGAAGTAATGAGGGCTACGAAACCTGTTTACTCTCTCCACTCTAGGCATGCAACTACATCAGAAGAGTTTATCAATGGGATCACTGATGTAGAAGGTGCTGGAGGTGACAACCGGAGGCAACCAGCTCTTCTGAGGCTTGCTCTTGACGATGTGCTTGATTCTCTTAAGCCTAAGGAGAGCTTGGTGATCAGACAAAGATATGGTCTCGATGGCAAAGGAAACCGAACATTAGGTGAGATAGCCGGAAATTTAAATATTTCAAGAGAAATGGTTCGAAAGCATGAAGTCAAAGCTCTCATGAAGCTGAAGCATCCTGCAAGAGTGGATTATCTTCGTCGGTACTTAATCTGAACTGATGAGAACATCATGCTTTGTTTCAATGATCTTGTACTCTGGATAATTTCCTATCGCCAAAACATCTCGAGGGGCAAGAGATATGTACCATATATTTGTAACTACTTGAATATAGAAACCTCACACCATATGATTCATATTTTAACGGACATACAATTGGCAGCTCTGCTACTTTCATTTCGGAAGATGGCAGTTTGATAGGAGAAGAACAGCAACTAAACAACAGGAATGCAGAAACCATGCAAAGGAAAGATCAGAACCTATGGTTTTTTGTTTCATTTTTCCTCTTTAGAGGAAGAAACTTCTTTAGCCATTAGTATCAACTGGAAAATGGCCACAACTGTTTCTTTTTAAATTTGTCTAGAGTTGGGAGTCACTGAAATTACCTATATAAAATTGTTGGAAATGAATTTATTC

Coding sequence (CDS)

ATGGGAGTTGTGACTGTTTCGAGCTCGGCAGCACGAACTCCTCTTCGGCTGGGCGCAAAATTTTCCAATCACAATTCTACATTGAAAAGACCAACGATTGTGGCATTTAAAGCAGATAAGCACACTAACACTACTTTGGTCTCACCCCACGAGCAAGTAACCCTACCTGTGGAGAGTAATAACAGAACCAAGAAAAGATCAGGAAAAACTAGCAAGTCTTTGAAGAGAGTTAAAGCTGTCTTTACCGATGAAGCTTCTCCCTGTACTTCGGAAGTGGATTACAATGAGGCAGCTGCCAAACTTGAAAATATATTCAATCTTAGCCCTATGACAGATGATACTGATGTGGAAAGTAAAGATGGCAGGTTGAGAAGCGGTCAGCAGAGGAGGAAGAAATCAGACAAGAGATCAGGTGATGGCATTATCAGGAACCAGACTAAGAGGATTAAGCGACTAGATCTCGACAAGAGGATAGCATTGAAAAATAACAAGGAAGATAAAGCAGCTCCTTCATTAAAGAAACAAAAGGAGACCAAAAACGAGGCTGATGAGATTGATGATCTTGTTAGAGACTACTCTGCTTCAACTGACTTGGTTAGTTTAGACTGGAAAAAAATGAAGATTCCTCCAGTTCTTCCTTCATCGGAGCATACCCGTTTGTTCAAATTGGTTCAACCCATGAAGGCTCTTATTCAAGTACAAGAAGATCTGCAGAAAGAATTGGGCAGAGAACCAACTGAAGGTGAACTGGCGAATGCGACAAATATGAATGTGGTTCAAGTAAGGAGACAATTGGAGGTTGGTCGTGCTGCCAGAAACAAGCTCATCAAGCATAACCTTCGCCTTGTATTGTTCGTGATCAATAAATACTTTGAAGATTTTGCAAGTGGCCCGAAATTTCAAGACCTTTGTCAAGCAGGAGTCAAGGGACTCATTACAGCAATTGATCGCTTTGAGCCAAAGAGGAGATTCCGACTGTCAACCTATGCTTTATTCTGGATAAGGCATGCTATTATTCGGTCAATGACTCTCTCAAGCTTCACACGCGTCTCATTTGGACTTGACTCGGTAAGAGTTGAAATCCAAAGAGCTAAACTTGAGTTATTATTTGAGCTTCATAGATTACCAACAGAGGAAGAGATAGTTGCAAAAGTTGGCATCTCACCTGAGAGGTATCTTGAAGTAATGAGGGCTACGAAACCTGTTTACTCTCTCCACTCTAGGCATGCAACTACATCAGAAGAGTTTATCAATGGGATCACTGATGTAGAAGGTGCTGGAGGTGACAACCGGAGGCAACCAGCTCTTCTGAGGCTTGCTCTTGACGATGTGCTTGATTCTCTTAAGCCTAAGGAGAGCTTGGTGATCAGACAAAGATATGGTCTCGATGGCAAAGGAAACCGAACATTAGGTGAGATAGCCGGAAATTTAAATATTTCAAGAGAAATGGTTCGAAAGCATGAAGTCAAAGCTCTCATGAAGCTGAAGCATCCTGCAAGAGTGGATTATCTTCGTCGGTACTTAATCTGA

Protein sequence

MGVVTVSSSAARTPLRLGAKFSNHNSTLKRPTIVAFKADKHTNTTLVSPHEQVTLPVESNNRTKKRSGKTSKSLKRVKAVFTDEASPCTSEVDYNEAAAKLENIFNLSPMTDDTDVESKDGRLRSGQQRRKKSDKRSGDGIIRNQTKRIKRLDLDKRIALKNNKEDKAAPSLKKQKETKNEADEIDDLVRDYSASTDLVSLDWKKMKIPPVLPSSEHTRLFKLVQPMKALIQVQEDLQKELGREPTEGELANATNMNVVQVRRQLEVGRAARNKLIKHNLRLVLFVINKYFEDFASGPKFQDLCQAGVKGLITAIDRFEPKRRFRLSTYALFWIRHAIIRSMTLSSFTRVSFGLDSVRVEIQRAKLELLFELHRLPTEEEIVAKVGISPERYLEVMRATKPVYSLHSRHATTSEEFINGITDVEGAGGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYLI

Homology

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BLAST of MC10g0077 vs. ExPASy Swiss-Prot
Match: Q9ZNX9 (RNA polymerase sigma factor sigE, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SIGE PE=1 SV=1)

HSP 1 Score: 614.0 bits (1582), Expect = 1.5e-174
Identity = 329/517 (63.64%), Postives = 407/517 (78.72%), Query Frame = 0


Query: 1   MGVVTVSSSAARTPLRLGAKFSNHNSTLKRPTIVAFKADKHTNTTL-VSPHEQVTLPVES 60
           MGVV++SSSAAR+PL LG     H S+LK+P+IVAFKAD  +N+ L + P EQV +P E 
Sbjct: 1   MGVVSISSSAARSPLGLGNDLLTHRSSLKKPSIVAFKADDSSNSALIIPPREQVLIPAEK 60

Query: 61  NNRTKKR--SGKTSKSLKRVKAVFTDEASPCTSEVDYNEAAAKLENIFNLSPMTD---DT 120
           +N  K+     K  K+ K+  ++  + A  C+  VDYNEAAA+LE+I+ LSP T    + 
Sbjct: 61  HNEKKREVTRRKPCKTPKKPLSLEHNSAPSCSLGVDYNEAAARLESIYKLSPATTTLVED 120

Query: 121 DVESKDGRLRSGQQRRKKSDKRSGDGIIRNQTKRIKRLDLDKRIALKNNKEDKAAPSLKK 180
           DVE    + +  ++R++K        ++RN  K+ KR+ LDKRIALK N ++K   +   
Sbjct: 121 DVEDGGSKAKVSRRRKRKESGEEKKVVVRNNVKKEKRMSLDKRIALKRNVQEKPVVASVD 180

Query: 181 QKETKNEADE--IDDLVRDYSASTDLVSLDWKKMKIPPVLPSSEHTRLFKLVQPMKALIQ 240
           +K TK + +E  I+ LVRDYSAS D+VSLDWKKMKIPPVL S+EH  LFKL+QPMKAL++
Sbjct: 181 KKVTKRQQEEEKIERLVRDYSASNDIVSLDWKKMKIPPVLSSTEHAWLFKLMQPMKALLE 240

Query: 241 VQEDLQKELGREPTEGELANATNMNVVQVRRQLEVGRAARNKLIKHNLRLVLFVINKYFE 300
           V++ LQK LGREP E E+A   NM   +V++++E+GRAARNKLIKHNLRLVLFV+NKYF 
Sbjct: 241 VKDVLQKSLGREPREAEIAGEINMTAGEVKKKIEIGRAARNKLIKHNLRLVLFVMNKYFH 300

Query: 301 DFASGPKFQDLCQAGVKGLITAIDRFEPKRRFRLSTYALFWIRHAIIRSMTLSSFTRVSF 360
           +F +GPKFQDLCQAG++GLITAIDRFEPKR+FRLSTY LFWIRHAIIRSMT S+FTRV F
Sbjct: 301 EFTNGPKFQDLCQAGMRGLITAIDRFEPKRKFRLSTYGLFWIRHAIIRSMTTSNFTRVPF 360

Query: 361 GLDSVRVEIQRAKLELLFELHRLPTEEEIVAKVGISPERYLEVMRATKPVYSLHSRHATT 420
           GL+SVRVEI +AK EL FE+ R PTE+E+V ++ I+PERY EV+RA KPV SL+S+H+ T
Sbjct: 361 GLESVRVEIYKAKTELWFEMGRPPTEDEVVERLKITPERYREVLRAAKPVLSLNSKHSVT 420

Query: 421 SEEFINGITDVEGAGGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRTLGE 480
            EEFINGITDV+G G +N RQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKG+RTLGE
Sbjct: 421 QEEFINGITDVDGVGANNSRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGE 480

Query: 481 IAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYLI 510
           IAGNLNISREMVRKHEVKALMKLKH ARVDYLR+Y++
Sbjct: 481 IAGNLNISREMVRKHEVKALMKLKHQARVDYLRQYIV 517

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BLAST of MC10g0077 vs. ExPASy Swiss-Prot
Match: P26683 (RNA polymerase sigma factor SigA OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=sigA PE=3 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 2.1e-38
Identity = 113/359 (31.48%), Postives = 193/359 (53.76%), Query Frame = 0


Query: 153 DLDKRIALKNNKED-KAAPSLKKQKETKNEADE-IDDLVRDYSASTDLVSLDWKKMKIPP 212
           D+D+ +  + +++D K+  + K ++ T+++     +D +R Y      + L         
Sbjct: 44  DIDEFLEPQTDEDDAKSGKAAKSRRRTQSKKKHYTEDSIRLYLQEIGRIRL--------- 103

Query: 213 VLPSSEHTRLFKLVQPMKALIQVQEDLQKELGREPTEGELANATNMNVVQVRRQLEVGRA 272
            L + E   L + +  +  L +V+E L ++L R+P + E A A  + +   R +L +GR 
Sbjct: 104 -LRADEEIELARKIADLLELERVRERLSEKLERDPRDSEWAEAVQLPLPAFRYRLHIGRR 163

Query: 273 ARNKLIKHNLRLVLFVINKYFEDFASGPKFQDLCQAGVKGLITAIDRFEPKRRFRLSTYA 332
           A++K+++ NLRLV+ +  KY      G  FQDL Q G  GLI A ++F+ ++ ++ STYA
Sbjct: 164 AKDKMVQSNLRLVVSIAKKYMN---RGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYA 223

Query: 333 LFWIRHAIIRSMTLSSFT-RVSFGLDSVRVEIQRAKLELLFELHRLPTEEEIVAKVGISP 392
            +WIR AI R++   S T R+   L      I++    L  E+ R PTEEEI  ++ ++ 
Sbjct: 224 TWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMGRKPTEEEIATRMEMTI 283

Query: 393 ERYLEVMRATKPVYSLHSRHATTSEEFINGITDVEGAGGDNRRQPALLRLALDDVLDSLK 452
           E+   + ++ +   SL +      +  +    + +G   +++    LLR  L+ VLDSL 
Sbjct: 284 EKLRFIAKSAQLPISLETPIGKEEDSRLGDFIESDGETPEDQVSKNLLREDLEKVLDSLS 343

Query: 453 PKESLVIRQRYGLDGKGNRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYL 509
           P+E  V+R RYGLD    +TL EI    N++RE +R+ E KAL KL+HP R   L+ Y+
Sbjct: 344 PRERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLRHPNRNSVLKEYI 389

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BLAST of MC10g0077 vs. ExPASy Swiss-Prot
Match: P38023 (RNA polymerase sigma factor SigA1 OS=Synechococcus elongatus (strain PCC 7942 / FACHB-805) OX=1140 GN=sigA1 PE=3 SV=2)

HSP 1 Score: 152.5 bits (384), Expect = 1.3e-35
Identity = 120/394 (30.46%), Postives = 201/394 (51.02%), Query Frame = 0


Query: 117 ESKDGRLRSGQQRRKKSD-KRSGDGIIRNQTKRIKRLDLDKRIALKNNKEDKAAPSLKKQ 176
           E  D  L+  + + K+S  K++   ++   T      D+D      +  ED+ A +  K 
Sbjct: 21  ELLDPALKPAETKAKRSSRKKATTAVVEPATTIAPTADVDAIDDEDSVGEDEDAAAKAKA 80

Query: 177 KETKNEADEIDDLVRDYSASTDLVSLDWKKMKIPPVLPSSEHTRLFKLVQPMKALIQVQE 236
           K  K      +D +R Y      + L          L + E   L + +  + AL ++++
Sbjct: 81  KVRKTYT---EDSIRLYLQEIGRIRL----------LRADEEIELARQIADLLALERIRD 140

Query: 237 DLQKELGREPTEGELANATNMNVVQVRRQLEVGRAARNKLIKHNLRLVLFVINKYFEDFA 296
           +L ++L R P++ E A A +  + + RR+L  GR A++K+++ NLRLV+ +  KY     
Sbjct: 141 ELLEQLDRLPSDAEWAAAVDSPLDEFRRRLFRGRRAKDKMVQSNLRLVVSIAKKYMN--- 200

Query: 297 SGPKFQDLCQAGVKGLITAIDRFEPKRRFRLSTYALFWIRHAIIRSMTLSSFT-RVSFGL 356
            G  FQDL Q G  GLI A ++F+ ++ ++ STYA +WIR AI R++   S T R+   L
Sbjct: 201 RGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHL 260

Query: 357 DSVRVEIQRAKLELLFELHRLPTEEEIVAKVGISPERYLEVMRATKPVYSLHSRHATTSE 416
                 I++    L  E+ R PTEEEI  ++ ++ E+   + ++ +   SL +      +
Sbjct: 261 YETISRIKKTTKLLSQEMGRKPTEEEIATRMEMTIEKLRFIAKSAQLPISLETPIGKEED 320

Query: 417 EFINGITDVEGAGGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRTLGEIA 476
             +    + +G   ++     LLR  L+ VL +L P+E  V+R RYGLD    +TL EI 
Sbjct: 321 SRLGDFIEADGETPEDEVAKNLLREDLEGVLSTLSPRERDVLRLRYGLDDGRMKTLEEIG 380

Query: 477 GNLNISREMVRKHEVKALMKLKHPARVDYLRRYL 509
              N++RE +R+ E KAL KL+HP R   L+ Y+
Sbjct: 381 QLFNVTRERIRQIEAKALRKLRHPNRNSILKEYI 398

[Close]

BLAST of MC10g0077 vs. ExPASy Swiss-Prot
Match: P74565 (RNA polymerase sigma factor SigA OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=sigA PE=3 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 2.2e-35
Identity = 94/263 (35.74%), Postives = 146/263 (55.51%), Query Frame = 0


Query: 247 EGELANATNMNVVQVRRQLEVGRAARNKLIKHNLRLVLFVINKYFEDFASGPKFQDLCQA 306
           E E +   N N    RR+L + R A++K+++ NLRLV+ +  KY      G  FQDL Q 
Sbjct: 165 ENEWSQQPNKNFAAFRRRLFLDRRAKDKMVQSNLRLVVSIAKKYMN---RGLSFQDLIQE 224

Query: 307 GVKGLITAIDRFEPKRRFRLSTYALFWIRHAIIRSMTLSSFT-RVSFGLDSVRVEIQRAK 366
           G  GLI A ++F+ ++ ++ STYA +WIR AI R++   S T R+   L      I++  
Sbjct: 225 GSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTT 284

Query: 367 LELLFELHRLPTEEEIVAKVGISPERYLEVMRATKPVYSLHSRHATTSEEFINGITDVEG 426
             L  E+ R PTEEEI  K+ ++ E+   + ++ +   SL +      +  +    + +G
Sbjct: 285 KLLSQEMRRKPTEEEIAEKMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIEADG 344

Query: 427 AGGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNISREMVR 486
              ++     LLR  L++VLD+L P+E  V+R RYGLD    +TL EI    N++RE +R
Sbjct: 345 ETPEDEVSKNLLREDLENVLDTLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIR 404

Query: 487 KHEVKALMKLKHPARVDYLRRYL 509
           + E KAL KL+HP R   L+ Y+
Sbjct: 405 QIEAKALRKLRHPNRNSILKEYI 424

[Close]

BLAST of MC10g0077 vs. ExPASy Swiss-Prot
Match: P52322 (RNA polymerase sigma factor SigA OS=Microcystis aeruginosa OX=1126 GN=sigA PE=3 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 6.9e-34
Identity = 90/248 (36.29%), Postives = 140/248 (56.45%), Query Frame = 0


Query: 262 RRQLEVGRAARNKLIKHNLRLVLFVINKYFEDFASGPKFQDLCQAGVKGLITAIDRFEPK 321
           +R+L  GR A+ K+++ NLRLV+ +  KY      G  FQDL Q G  GLI A ++F+ +
Sbjct: 171 KRRLYHGRRAKEKMVQSNLRLVVSIAKKYMN---RGLSFQDLIQEGSLGLIRAAEKFDHE 230

Query: 322 RRFRLSTYALFWIRHAIIRSMTLSSFT-RVSFGLDSVRVEIQRAKLELLFELHRLPTEEE 381
           + ++ STYA +WIR AI R++   S T R+   L      I++    L  E+ R PTEEE
Sbjct: 231 KGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKILSQEMRRKPTEEE 290

Query: 382 IVAKVGISPERYLEVMRATKPVYSLHSRHATTSEEFINGITDVEGAGGDNRRQPALLRLA 441
           I  K+ ++ E+   + ++ +   SL +      +  +    + +G   ++     LLR  
Sbjct: 291 IATKMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIEADGETPEDEVSKNLLRED 350

Query: 442 LDDVLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNISREMVRKHEVKALMKLKHPAR 501
           L++VLD+L P+E  V+R RYGLD    +TL EI    N++RE +R+ E KAL KL+HP R
Sbjct: 351 LENVLDTLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLRHPNR 410

Query: 502 VDYLRRYL 509
              L+ Y+
Sbjct: 411 NSILKEYI 415

[Close]

BLAST of MC10g0077 vs. NCBI nr
Match: XP_022140941.1 (RNA polymerase sigma factor sigE, chloroplastic/mitochondrial [Momordica charantia] >XP_022140943.1 RNA polymerase sigma factor sigE, chloroplastic/mitochondrial [Momordica charantia])

HSP 1 Score: 970 bits (2508), Expect = 0.0
Identity = 509/509 (100.00%), Postives = 509/509 (100.00%), Query Frame = 0


Query: 1   MGVVTVSSSAARTPLRLGAKFSNHNSTLKRPTIVAFKADKHTNTTLVSPHEQVTLPVESN 60
           MGVVTVSSSAARTPLRLGAKFSNHNSTLKRPTIVAFKADKHTNTTLVSPHEQVTLPVESN
Sbjct: 1   MGVVTVSSSAARTPLRLGAKFSNHNSTLKRPTIVAFKADKHTNTTLVSPHEQVTLPVESN 60

Query: 61  NRTKKRSGKTSKSLKRVKAVFTDEASPCTSEVDYNEAAAKLENIFNLSPMTDDTDVESKD 120
           NRTKKRSGKTSKSLKRVKAVFTDEASPCTSEVDYNEAAAKLENIFNLSPMTDDTDVESKD
Sbjct: 61  NRTKKRSGKTSKSLKRVKAVFTDEASPCTSEVDYNEAAAKLENIFNLSPMTDDTDVESKD 120

Query: 121 GRLRSGQQRRKKSDKRSGDGIIRNQTKRIKRLDLDKRIALKNNKEDKAAPSLKKQKETKN 180
           GRLRSGQQRRKKSDKRSGDGIIRNQTKRIKRLDLDKRIALKNNKEDKAAPSLKKQKETKN
Sbjct: 121 GRLRSGQQRRKKSDKRSGDGIIRNQTKRIKRLDLDKRIALKNNKEDKAAPSLKKQKETKN 180

Query: 181 EADEIDDLVRDYSASTDLVSLDWKKMKIPPVLPSSEHTRLFKLVQPMKALIQVQEDLQKE 240
           EADEIDDLVRDYSASTDLVSLDWKKMKIPPVLPSSEHTRLFKLVQPMKALIQVQEDLQKE
Sbjct: 181 EADEIDDLVRDYSASTDLVSLDWKKMKIPPVLPSSEHTRLFKLVQPMKALIQVQEDLQKE 240

Query: 241 LGREPTEGELANATNMNVVQVRRQLEVGRAARNKLIKHNLRLVLFVINKYFEDFASGPKF 300
           LGREPTEGELANATNMNVVQVRRQLEVGRAARNKLIKHNLRLVLFVINKYFEDFASGPKF
Sbjct: 241 LGREPTEGELANATNMNVVQVRRQLEVGRAARNKLIKHNLRLVLFVINKYFEDFASGPKF 300

Query: 301 QDLCQAGVKGLITAIDRFEPKRRFRLSTYALFWIRHAIIRSMTLSSFTRVSFGLDSVRVE 360
           QDLCQAGVKGLITAIDRFEPKRRFRLSTYALFWIRHAIIRSMTLSSFTRVSFGLDSVRVE
Sbjct: 301 QDLCQAGVKGLITAIDRFEPKRRFRLSTYALFWIRHAIIRSMTLSSFTRVSFGLDSVRVE 360

Query: 361 IQRAKLELLFELHRLPTEEEIVAKVGISPERYLEVMRATKPVYSLHSRHATTSEEFINGI 420
           IQRAKLELLFELHRLPTEEEIVAKVGISPERYLEVMRATKPVYSLHSRHATTSEEFINGI
Sbjct: 361 IQRAKLELLFELHRLPTEEEIVAKVGISPERYLEVMRATKPVYSLHSRHATTSEEFINGI 420

Query: 421 TDVEGAGGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNIS 480
           TDVEGAGGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNIS
Sbjct: 421 TDVEGAGGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNIS 480

Query: 481 REMVRKHEVKALMKLKHPARVDYLRRYLI 509
           REMVRKHEVKALMKLKHPARVDYLRRYLI
Sbjct: 481 REMVRKHEVKALMKLKHPARVDYLRRYLI 509

[Close]

BLAST of MC10g0077 vs. NCBI nr
Match: XP_038903010.1 (RNA polymerase sigma factor sigE, chloroplastic/mitochondrial [Benincasa hispida] >XP_038903018.1 RNA polymerase sigma factor sigE, chloroplastic/mitochondrial [Benincasa hispida])

HSP 1 Score: 902 bits (2332), Expect = 0.0
Identity = 468/509 (91.94%), Postives = 490/509 (96.27%), Query Frame = 0


Query: 1   MGVVTVSSSAARTPLRLGAKFSNHNSTLKRPTIVAFKADKHTNTTLVSPHEQVTLPVESN 60
           MGVVTVSSSAAR+P RLGAKF+NHNSTLKRP+IVAFKADKHTNTTLVSPHEQVTLPVESN
Sbjct: 1   MGVVTVSSSAARSPFRLGAKFTNHNSTLKRPSIVAFKADKHTNTTLVSPHEQVTLPVESN 60

Query: 61  NRTKKRSGKTSKSLKRVKAVFTDEASPCTSEVDYNEAAAKLENIFNLSPMTDDTDVESKD 120
           N  KKRSGKTSK LKRVKAV  DEA+PCT +VDYNEAAAKLENIF LSP+T+DTD+ESKD
Sbjct: 61  NINKKRSGKTSKPLKRVKAVLIDEATPCTLDVDYNEAAAKLENIFKLSPVTEDTDMESKD 120

Query: 121 GRLRSGQQRRKKSDKRSGDGIIRNQTKRIKRLDLDKRIALKNNKEDKAAPSLKKQKETKN 180
           GR + GQQRRKKSDKR  DGI+RNQTKRIKRLDLDKRIAL++NKE KAAPSL+KQK+TKN
Sbjct: 121 GRSKRGQQRRKKSDKRQSDGIVRNQTKRIKRLDLDKRIALRSNKEGKAAPSLRKQKDTKN 180

Query: 181 EADEIDDLVRDYSASTDLVSLDWKKMKIPPVLPSSEHTRLFKLVQPMKALIQVQEDLQKE 240
           E DEID LVRDYSASTDLVSLDWKKMKIPPVLPSSEHTRLFKLVQPMKALIQVQE+LQKE
Sbjct: 181 EDDEIDCLVRDYSASTDLVSLDWKKMKIPPVLPSSEHTRLFKLVQPMKALIQVQEELQKE 240

Query: 241 LGREPTEGELANATNMNVVQVRRQLEVGRAARNKLIKHNLRLVLFVINKYFEDFASGPKF 300
           LGREPTEGELAN TNMNV+QVRRQLEVGRAARNKLIKHNLRLVLFVINKYFEDFASGPKF
Sbjct: 241 LGREPTEGELANVTNMNVIQVRRQLEVGRAARNKLIKHNLRLVLFVINKYFEDFASGPKF 300

Query: 301 QDLCQAGVKGLITAIDRFEPKRRFRLSTYALFWIRHAIIRSMTLSSFTRVSFGLDSVRVE 360
           QDLCQAGVKGLITAIDRFEPKR+FRLSTYALFWIRHAIIRSMTLSSFTRVSFGLDSVRVE
Sbjct: 301 QDLCQAGVKGLITAIDRFEPKRKFRLSTYALFWIRHAIIRSMTLSSFTRVSFGLDSVRVE 360

Query: 361 IQRAKLELLFELHRLPTEEEIVAKVGISPERYLEVMRATKPVYSLHSRHATTSEEFINGI 420
           IQ+AKLEL  ELHRLPTEEEI+AKVGISPERYLEVMRATKPVYSLHS+H+TTSEEFINGI
Sbjct: 361 IQKAKLELSCELHRLPTEEEIIAKVGISPERYLEVMRATKPVYSLHSKHSTTSEEFINGI 420

Query: 421 TDVEGAGGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNIS 480
           TDVEG GGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNIS
Sbjct: 421 TDVEGTGGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNIS 480

Query: 481 REMVRKHEVKALMKLKHPARVDYLRRYLI 509
           REMVRKHEVKALMKLKHPARVDYLRRYL+
Sbjct: 481 REMVRKHEVKALMKLKHPARVDYLRRYLV 509

[Close]

BLAST of MC10g0077 vs. NCBI nr
Match: XP_022922776.1 (RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like isoform X2 [Cucurbita moschata] >XP_022922777.1 RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 884 bits (2285), Expect = 0.0
Identity = 460/509 (90.37%), Postives = 486/509 (95.48%), Query Frame = 0


Query: 1   MGVVTVSSSAARTPLRLGAKFSNHNSTLKRPTIVAFKADKHTNTTLVSPHEQVTLPVESN 60
           MGVVTVSSSAARTP RLG KFSN+ S LKRP+IVAFK DKHTNTTLVSPHEQVTLPVESN
Sbjct: 1   MGVVTVSSSAARTPFRLGGKFSNNISALKRPSIVAFKVDKHTNTTLVSPHEQVTLPVESN 60

Query: 61  NRTKKRSGKTSKSLKRVKAVFTDEASPCTSEVDYNEAAAKLENIFNLSPMTDDTDVESKD 120
           NR +KR+GK+SKSLKRVKAV  DEA+PCTS+VDYNEAAAKLENIF LSP+T+DTD+E++D
Sbjct: 61  NRNQKRTGKSSKSLKRVKAVLIDEATPCTSDVDYNEAAAKLENIFKLSPVTEDTDMENED 120

Query: 121 GRLRSGQQRRKKSDKRSGDGIIRNQTKRIKRLDLDKRIALKNNKEDKAAPSLKKQKETKN 180
           GR + GQQRRKK  KR  DG++RNQTKRIKRLDLDKRIALK+NKE K+APSL KQK+TK+
Sbjct: 121 GRPKRGQQRRKKLGKRPCDGVVRNQTKRIKRLDLDKRIALKSNKEGKSAPSLSKQKDTKS 180

Query: 181 EADEIDDLVRDYSASTDLVSLDWKKMKIPPVLPSSEHTRLFKLVQPMKALIQVQEDLQKE 240
           EADEIDDLVR+YSASTDLVSLDWKKMKIPPVLPSSEHTRLFKLVQPMKALIQ QE+LQK 
Sbjct: 181 EADEIDDLVRNYSASTDLVSLDWKKMKIPPVLPSSEHTRLFKLVQPMKALIQAQEELQKG 240

Query: 241 LGREPTEGELANATNMNVVQVRRQLEVGRAARNKLIKHNLRLVLFVINKYFEDFASGPKF 300
           LGREPTEGELANATNMNV+QVRRQLEVGRAARNKLIKHNLRLVLFVINKYFEDFASGPKF
Sbjct: 241 LGREPTEGELANATNMNVIQVRRQLEVGRAARNKLIKHNLRLVLFVINKYFEDFASGPKF 300

Query: 301 QDLCQAGVKGLITAIDRFEPKRRFRLSTYALFWIRHAIIRSMTLSSFTRVSFGLDSVRVE 360
           QDLCQAGVKGLITAIDRFEPKRRFRLSTYALFWIRHAIIRSMTLSSFTRVSFGLDSVRVE
Sbjct: 301 QDLCQAGVKGLITAIDRFEPKRRFRLSTYALFWIRHAIIRSMTLSSFTRVSFGLDSVRVE 360

Query: 361 IQRAKLELLFELHRLPTEEEIVAKVGISPERYLEVMRATKPVYSLHSRHATTSEEFINGI 420
           IQRAKLELL ELHRLPTEEE++AKVGISPERYLEVMRATKPVYSLHSRH+TTSEEFI+GI
Sbjct: 361 IQRAKLELLCELHRLPTEEEVIAKVGISPERYLEVMRATKPVYSLHSRHSTTSEEFISGI 420

Query: 421 TDVEGAGGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNIS 480
            DVEG GGDNRRQ ALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNIS
Sbjct: 421 ADVEGTGGDNRRQSALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNIS 480

Query: 481 REMVRKHEVKALMKLKHPARVDYLRRYLI 509
           REMVRKHEVKALMKLKHPARVDYLRRYLI
Sbjct: 481 REMVRKHEVKALMKLKHPARVDYLRRYLI 509

[Close]

BLAST of MC10g0077 vs. NCBI nr
Match: XP_023552213.1 (RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like [Cucurbita pepo subsp. pepo] >XP_023552214.1 RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 884 bits (2285), Expect = 0.0
Identity = 460/509 (90.37%), Postives = 486/509 (95.48%), Query Frame = 0


Query: 1   MGVVTVSSSAARTPLRLGAKFSNHNSTLKRPTIVAFKADKHTNTTLVSPHEQVTLPVESN 60
           MGVVTVSSSAARTP RLG KFSN+ S LKRP+IVAFK DKHTNTTLVSPHEQVTLPVESN
Sbjct: 1   MGVVTVSSSAARTPFRLGGKFSNNISALKRPSIVAFKVDKHTNTTLVSPHEQVTLPVESN 60

Query: 61  NRTKKRSGKTSKSLKRVKAVFTDEASPCTSEVDYNEAAAKLENIFNLSPMTDDTDVESKD 120
           NR +KR+GK+SKSLKRVKAV  DEA+PCTS+VDYNEAAAKLENIF LSP+T+DTD+E++D
Sbjct: 61  NRNQKRTGKSSKSLKRVKAVLIDEATPCTSDVDYNEAAAKLENIFKLSPVTEDTDMENED 120

Query: 121 GRLRSGQQRRKKSDKRSGDGIIRNQTKRIKRLDLDKRIALKNNKEDKAAPSLKKQKETKN 180
           GR + GQQRRKK  KR  DG++RNQTKRIKRLDLDKRIALK+NKE K+APSL KQKETK+
Sbjct: 121 GRPKRGQQRRKKLGKRPCDGVVRNQTKRIKRLDLDKRIALKSNKEGKSAPSLSKQKETKS 180

Query: 181 EADEIDDLVRDYSASTDLVSLDWKKMKIPPVLPSSEHTRLFKLVQPMKALIQVQEDLQKE 240
           EADEIDDLVR+YSASTDLVSLDWKKMKIPPVLPSSEHTRLFKLVQPMKALIQ QE+LQK 
Sbjct: 181 EADEIDDLVRNYSASTDLVSLDWKKMKIPPVLPSSEHTRLFKLVQPMKALIQAQEELQKG 240

Query: 241 LGREPTEGELANATNMNVVQVRRQLEVGRAARNKLIKHNLRLVLFVINKYFEDFASGPKF 300
           LGREPTEGELANATNMNV+QVRRQLEVGRAARNKLIKHNLRLVLFVINKYFEDFASGPKF
Sbjct: 241 LGREPTEGELANATNMNVIQVRRQLEVGRAARNKLIKHNLRLVLFVINKYFEDFASGPKF 300

Query: 301 QDLCQAGVKGLITAIDRFEPKRRFRLSTYALFWIRHAIIRSMTLSSFTRVSFGLDSVRVE 360
           QDLCQAGVKGLITAIDRFEPKRRFRLSTYALFWIRHAIIRSMTLSSFTRVSFGLDSVRVE
Sbjct: 301 QDLCQAGVKGLITAIDRFEPKRRFRLSTYALFWIRHAIIRSMTLSSFTRVSFGLDSVRVE 360

Query: 361 IQRAKLELLFELHRLPTEEEIVAKVGISPERYLEVMRATKPVYSLHSRHATTSEEFINGI 420
           IQRAKLELL ELHRLPTE+E++AKVGISPERYLEVMRATKPVYSLHSRH+TTSEEFI+GI
Sbjct: 361 IQRAKLELLCELHRLPTEQEVIAKVGISPERYLEVMRATKPVYSLHSRHSTTSEEFISGI 420

Query: 421 TDVEGAGGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNIS 480
            DVEG GGDNRRQ ALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNIS
Sbjct: 421 ADVEGTGGDNRRQSALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNIS 480

Query: 481 REMVRKHEVKALMKLKHPARVDYLRRYLI 509
           REMVRKHEVKALMKLKHPARVDYLRRYLI
Sbjct: 481 REMVRKHEVKALMKLKHPARVDYLRRYLI 509

[Close]

BLAST of MC10g0077 vs. NCBI nr
Match: XP_022922775.1 (RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 884 bits (2285), Expect = 0.0
Identity = 460/509 (90.37%), Postives = 486/509 (95.48%), Query Frame = 0


Query: 1   MGVVTVSSSAARTPLRLGAKFSNHNSTLKRPTIVAFKADKHTNTTLVSPHEQVTLPVESN 60
           MGVVTVSSSAARTP RLG KFSN+ S LKRP+IVAFK DKHTNTTLVSPHEQVTLPVESN
Sbjct: 9   MGVVTVSSSAARTPFRLGGKFSNNISALKRPSIVAFKVDKHTNTTLVSPHEQVTLPVESN 68

Query: 61  NRTKKRSGKTSKSLKRVKAVFTDEASPCTSEVDYNEAAAKLENIFNLSPMTDDTDVESKD 120
           NR +KR+GK+SKSLKRVKAV  DEA+PCTS+VDYNEAAAKLENIF LSP+T+DTD+E++D
Sbjct: 69  NRNQKRTGKSSKSLKRVKAVLIDEATPCTSDVDYNEAAAKLENIFKLSPVTEDTDMENED 128

Query: 121 GRLRSGQQRRKKSDKRSGDGIIRNQTKRIKRLDLDKRIALKNNKEDKAAPSLKKQKETKN 180
           GR + GQQRRKK  KR  DG++RNQTKRIKRLDLDKRIALK+NKE K+APSL KQK+TK+
Sbjct: 129 GRPKRGQQRRKKLGKRPCDGVVRNQTKRIKRLDLDKRIALKSNKEGKSAPSLSKQKDTKS 188

Query: 181 EADEIDDLVRDYSASTDLVSLDWKKMKIPPVLPSSEHTRLFKLVQPMKALIQVQEDLQKE 240
           EADEIDDLVR+YSASTDLVSLDWKKMKIPPVLPSSEHTRLFKLVQPMKALIQ QE+LQK 
Sbjct: 189 EADEIDDLVRNYSASTDLVSLDWKKMKIPPVLPSSEHTRLFKLVQPMKALIQAQEELQKG 248

Query: 241 LGREPTEGELANATNMNVVQVRRQLEVGRAARNKLIKHNLRLVLFVINKYFEDFASGPKF 300
           LGREPTEGELANATNMNV+QVRRQLEVGRAARNKLIKHNLRLVLFVINKYFEDFASGPKF
Sbjct: 249 LGREPTEGELANATNMNVIQVRRQLEVGRAARNKLIKHNLRLVLFVINKYFEDFASGPKF 308

Query: 301 QDLCQAGVKGLITAIDRFEPKRRFRLSTYALFWIRHAIIRSMTLSSFTRVSFGLDSVRVE 360
           QDLCQAGVKGLITAIDRFEPKRRFRLSTYALFWIRHAIIRSMTLSSFTRVSFGLDSVRVE
Sbjct: 309 QDLCQAGVKGLITAIDRFEPKRRFRLSTYALFWIRHAIIRSMTLSSFTRVSFGLDSVRVE 368

Query: 361 IQRAKLELLFELHRLPTEEEIVAKVGISPERYLEVMRATKPVYSLHSRHATTSEEFINGI 420
           IQRAKLELL ELHRLPTEEE++AKVGISPERYLEVMRATKPVYSLHSRH+TTSEEFI+GI
Sbjct: 369 IQRAKLELLCELHRLPTEEEVIAKVGISPERYLEVMRATKPVYSLHSRHSTTSEEFISGI 428

Query: 421 TDVEGAGGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNIS 480
            DVEG GGDNRRQ ALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNIS
Sbjct: 429 ADVEGTGGDNRRQSALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNIS 488

Query: 481 REMVRKHEVKALMKLKHPARVDYLRRYLI 509
           REMVRKHEVKALMKLKHPARVDYLRRYLI
Sbjct: 489 REMVRKHEVKALMKLKHPARVDYLRRYLI 517

[Close]

BLAST of MC10g0077 vs. ExPASy TrEMBL
Match: A0A6J1CHI4 (RNA polymerase sigma factor sigE, chloroplastic/mitochondrial OS=Momordica charantia OX=3673 GN=LOC111011480 PE=3 SV=1)

HSP 1 Score: 970 bits (2508), Expect = 0.0
Identity = 509/509 (100.00%), Postives = 509/509 (100.00%), Query Frame = 0


Query: 1   MGVVTVSSSAARTPLRLGAKFSNHNSTLKRPTIVAFKADKHTNTTLVSPHEQVTLPVESN 60
           MGVVTVSSSAARTPLRLGAKFSNHNSTLKRPTIVAFKADKHTNTTLVSPHEQVTLPVESN
Sbjct: 1   MGVVTVSSSAARTPLRLGAKFSNHNSTLKRPTIVAFKADKHTNTTLVSPHEQVTLPVESN 60

Query: 61  NRTKKRSGKTSKSLKRVKAVFTDEASPCTSEVDYNEAAAKLENIFNLSPMTDDTDVESKD 120
           NRTKKRSGKTSKSLKRVKAVFTDEASPCTSEVDYNEAAAKLENIFNLSPMTDDTDVESKD
Sbjct: 61  NRTKKRSGKTSKSLKRVKAVFTDEASPCTSEVDYNEAAAKLENIFNLSPMTDDTDVESKD 120

Query: 121 GRLRSGQQRRKKSDKRSGDGIIRNQTKRIKRLDLDKRIALKNNKEDKAAPSLKKQKETKN 180
           GRLRSGQQRRKKSDKRSGDGIIRNQTKRIKRLDLDKRIALKNNKEDKAAPSLKKQKETKN
Sbjct: 121 GRLRSGQQRRKKSDKRSGDGIIRNQTKRIKRLDLDKRIALKNNKEDKAAPSLKKQKETKN 180

Query: 181 EADEIDDLVRDYSASTDLVSLDWKKMKIPPVLPSSEHTRLFKLVQPMKALIQVQEDLQKE 240
           EADEIDDLVRDYSASTDLVSLDWKKMKIPPVLPSSEHTRLFKLVQPMKALIQVQEDLQKE
Sbjct: 181 EADEIDDLVRDYSASTDLVSLDWKKMKIPPVLPSSEHTRLFKLVQPMKALIQVQEDLQKE 240

Query: 241 LGREPTEGELANATNMNVVQVRRQLEVGRAARNKLIKHNLRLVLFVINKYFEDFASGPKF 300
           LGREPTEGELANATNMNVVQVRRQLEVGRAARNKLIKHNLRLVLFVINKYFEDFASGPKF
Sbjct: 241 LGREPTEGELANATNMNVVQVRRQLEVGRAARNKLIKHNLRLVLFVINKYFEDFASGPKF 300

Query: 301 QDLCQAGVKGLITAIDRFEPKRRFRLSTYALFWIRHAIIRSMTLSSFTRVSFGLDSVRVE 360
           QDLCQAGVKGLITAIDRFEPKRRFRLSTYALFWIRHAIIRSMTLSSFTRVSFGLDSVRVE
Sbjct: 301 QDLCQAGVKGLITAIDRFEPKRRFRLSTYALFWIRHAIIRSMTLSSFTRVSFGLDSVRVE 360

Query: 361 IQRAKLELLFELHRLPTEEEIVAKVGISPERYLEVMRATKPVYSLHSRHATTSEEFINGI 420
           IQRAKLELLFELHRLPTEEEIVAKVGISPERYLEVMRATKPVYSLHSRHATTSEEFINGI
Sbjct: 361 IQRAKLELLFELHRLPTEEEIVAKVGISPERYLEVMRATKPVYSLHSRHATTSEEFINGI 420

Query: 421 TDVEGAGGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNIS 480
           TDVEGAGGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNIS
Sbjct: 421 TDVEGAGGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNIS 480

Query: 481 REMVRKHEVKALMKLKHPARVDYLRRYLI 509
           REMVRKHEVKALMKLKHPARVDYLRRYLI
Sbjct: 481 REMVRKHEVKALMKLKHPARVDYLRRYLI 509

[Close]

BLAST of MC10g0077 vs. ExPASy TrEMBL
Match: A0A6J1E518 (RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111430670 PE=3 SV=1)

HSP 1 Score: 884 bits (2285), Expect = 0.0
Identity = 460/509 (90.37%), Postives = 486/509 (95.48%), Query Frame = 0


Query: 1   MGVVTVSSSAARTPLRLGAKFSNHNSTLKRPTIVAFKADKHTNTTLVSPHEQVTLPVESN 60
           MGVVTVSSSAARTP RLG KFSN+ S LKRP+IVAFK DKHTNTTLVSPHEQVTLPVESN
Sbjct: 1   MGVVTVSSSAARTPFRLGGKFSNNISALKRPSIVAFKVDKHTNTTLVSPHEQVTLPVESN 60

Query: 61  NRTKKRSGKTSKSLKRVKAVFTDEASPCTSEVDYNEAAAKLENIFNLSPMTDDTDVESKD 120
           NR +KR+GK+SKSLKRVKAV  DEA+PCTS+VDYNEAAAKLENIF LSP+T+DTD+E++D
Sbjct: 61  NRNQKRTGKSSKSLKRVKAVLIDEATPCTSDVDYNEAAAKLENIFKLSPVTEDTDMENED 120

Query: 121 GRLRSGQQRRKKSDKRSGDGIIRNQTKRIKRLDLDKRIALKNNKEDKAAPSLKKQKETKN 180
           GR + GQQRRKK  KR  DG++RNQTKRIKRLDLDKRIALK+NKE K+APSL KQK+TK+
Sbjct: 121 GRPKRGQQRRKKLGKRPCDGVVRNQTKRIKRLDLDKRIALKSNKEGKSAPSLSKQKDTKS 180

Query: 181 EADEIDDLVRDYSASTDLVSLDWKKMKIPPVLPSSEHTRLFKLVQPMKALIQVQEDLQKE 240
           EADEIDDLVR+YSASTDLVSLDWKKMKIPPVLPSSEHTRLFKLVQPMKALIQ QE+LQK 
Sbjct: 181 EADEIDDLVRNYSASTDLVSLDWKKMKIPPVLPSSEHTRLFKLVQPMKALIQAQEELQKG 240

Query: 241 LGREPTEGELANATNMNVVQVRRQLEVGRAARNKLIKHNLRLVLFVINKYFEDFASGPKF 300
           LGREPTEGELANATNMNV+QVRRQLEVGRAARNKLIKHNLRLVLFVINKYFEDFASGPKF
Sbjct: 241 LGREPTEGELANATNMNVIQVRRQLEVGRAARNKLIKHNLRLVLFVINKYFEDFASGPKF 300

Query: 301 QDLCQAGVKGLITAIDRFEPKRRFRLSTYALFWIRHAIIRSMTLSSFTRVSFGLDSVRVE 360
           QDLCQAGVKGLITAIDRFEPKRRFRLSTYALFWIRHAIIRSMTLSSFTRVSFGLDSVRVE
Sbjct: 301 QDLCQAGVKGLITAIDRFEPKRRFRLSTYALFWIRHAIIRSMTLSSFTRVSFGLDSVRVE 360

Query: 361 IQRAKLELLFELHRLPTEEEIVAKVGISPERYLEVMRATKPVYSLHSRHATTSEEFINGI 420
           IQRAKLELL ELHRLPTEEE++AKVGISPERYLEVMRATKPVYSLHSRH+TTSEEFI+GI
Sbjct: 361 IQRAKLELLCELHRLPTEEEVIAKVGISPERYLEVMRATKPVYSLHSRHSTTSEEFISGI 420

Query: 421 TDVEGAGGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNIS 480
            DVEG GGDNRRQ ALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNIS
Sbjct: 421 ADVEGTGGDNRRQSALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNIS 480

Query: 481 REMVRKHEVKALMKLKHPARVDYLRRYLI 509
           REMVRKHEVKALMKLKHPARVDYLRRYLI
Sbjct: 481 REMVRKHEVKALMKLKHPARVDYLRRYLI 509

[Close]

BLAST of MC10g0077 vs. ExPASy TrEMBL
Match: A0A6J1E9R5 (RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430670 PE=3 SV=1)

HSP 1 Score: 884 bits (2285), Expect = 0.0
Identity = 460/509 (90.37%), Postives = 486/509 (95.48%), Query Frame = 0


Query: 1   MGVVTVSSSAARTPLRLGAKFSNHNSTLKRPTIVAFKADKHTNTTLVSPHEQVTLPVESN 60
           MGVVTVSSSAARTP RLG KFSN+ S LKRP+IVAFK DKHTNTTLVSPHEQVTLPVESN
Sbjct: 9   MGVVTVSSSAARTPFRLGGKFSNNISALKRPSIVAFKVDKHTNTTLVSPHEQVTLPVESN 68

Query: 61  NRTKKRSGKTSKSLKRVKAVFTDEASPCTSEVDYNEAAAKLENIFNLSPMTDDTDVESKD 120
           NR +KR+GK+SKSLKRVKAV  DEA+PCTS+VDYNEAAAKLENIF LSP+T+DTD+E++D
Sbjct: 69  NRNQKRTGKSSKSLKRVKAVLIDEATPCTSDVDYNEAAAKLENIFKLSPVTEDTDMENED 128

Query: 121 GRLRSGQQRRKKSDKRSGDGIIRNQTKRIKRLDLDKRIALKNNKEDKAAPSLKKQKETKN 180
           GR + GQQRRKK  KR  DG++RNQTKRIKRLDLDKRIALK+NKE K+APSL KQK+TK+
Sbjct: 129 GRPKRGQQRRKKLGKRPCDGVVRNQTKRIKRLDLDKRIALKSNKEGKSAPSLSKQKDTKS 188

Query: 181 EADEIDDLVRDYSASTDLVSLDWKKMKIPPVLPSSEHTRLFKLVQPMKALIQVQEDLQKE 240
           EADEIDDLVR+YSASTDLVSLDWKKMKIPPVLPSSEHTRLFKLVQPMKALIQ QE+LQK 
Sbjct: 189 EADEIDDLVRNYSASTDLVSLDWKKMKIPPVLPSSEHTRLFKLVQPMKALIQAQEELQKG 248

Query: 241 LGREPTEGELANATNMNVVQVRRQLEVGRAARNKLIKHNLRLVLFVINKYFEDFASGPKF 300
           LGREPTEGELANATNMNV+QVRRQLEVGRAARNKLIKHNLRLVLFVINKYFEDFASGPKF
Sbjct: 249 LGREPTEGELANATNMNVIQVRRQLEVGRAARNKLIKHNLRLVLFVINKYFEDFASGPKF 308

Query: 301 QDLCQAGVKGLITAIDRFEPKRRFRLSTYALFWIRHAIIRSMTLSSFTRVSFGLDSVRVE 360
           QDLCQAGVKGLITAIDRFEPKRRFRLSTYALFWIRHAIIRSMTLSSFTRVSFGLDSVRVE
Sbjct: 309 QDLCQAGVKGLITAIDRFEPKRRFRLSTYALFWIRHAIIRSMTLSSFTRVSFGLDSVRVE 368

Query: 361 IQRAKLELLFELHRLPTEEEIVAKVGISPERYLEVMRATKPVYSLHSRHATTSEEFINGI 420
           IQRAKLELL ELHRLPTEEE++AKVGISPERYLEVMRATKPVYSLHSRH+TTSEEFI+GI
Sbjct: 369 IQRAKLELLCELHRLPTEEEVIAKVGISPERYLEVMRATKPVYSLHSRHSTTSEEFISGI 428

Query: 421 TDVEGAGGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNIS 480
            DVEG GGDNRRQ ALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNIS
Sbjct: 429 ADVEGTGGDNRRQSALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNIS 488

Query: 481 REMVRKHEVKALMKLKHPARVDYLRRYLI 509
           REMVRKHEVKALMKLKHPARVDYLRRYLI
Sbjct: 489 REMVRKHEVKALMKLKHPARVDYLRRYLI 517

[Close]

BLAST of MC10g0077 vs. ExPASy TrEMBL
Match: A0A5A7U8E5 (RNA polymerase sigma factor sigE OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold175G00690 PE=3 SV=1)

HSP 1 Score: 877 bits (2267), Expect = 0.0
Identity = 467/547 (85.37%), Postives = 487/547 (89.03%), Query Frame = 0


Query: 1   MGVVTVSSSAARTPLRLGAKFSNHNSTLKRPTIVAFKADKHTNTTLVSPHEQVTLPVESN 60
           MGVVTVSSSAARTP RL AKFSNH STLKRP+IVAFKADKHTNTTLVSPHEQVTLPVESN
Sbjct: 1   MGVVTVSSSAARTPFRLSAKFSNHGSTLKRPSIVAFKADKHTNTTLVSPHEQVTLPVESN 60

Query: 61  NRTKKRSGKTSKSLKRVKAVFTDEASPCTSEVDYNEAAAKLENIFNLSPMTDDTDVESKD 120
           NR+KKRSG TSK LKRVKAV  DEA+ C+ ++DYNEAAAKLENIF LSPMT+D+D+ESKD
Sbjct: 61  NRSKKRSGNTSKPLKRVKAVLIDEATSCSLDLDYNEAAAKLENIFKLSPMTEDSDMESKD 120

Query: 121 GRLRSGQQRRKKSDKRSGDGIIRNQTKRIKRLDLDKRIALKN------------------ 180
           GR + GQQR KKSDKR  DGI+RN+TKRIKRLDLDKRIALKN                  
Sbjct: 121 GRSKRGQQRSKKSDKRPSDGIVRNKTKRIKRLDLDKRIALKNKKEGRAVALLKKQKDTKN 180

Query: 181 --------------------NKEDKAAPSLKKQKETKNEADEIDDLVRDYSASTDLVSLD 240
                               NKE KAAPSL+KQKETKNE DEID LVRDYSASTDLVSLD
Sbjct: 181 EADEIDGLRLDLEKRIALKSNKEGKAAPSLRKQKETKNEDDEIDRLVRDYSASTDLVSLD 240

Query: 241 WKKMKIPPVLPSSEHTRLFKLVQPMKALIQVQEDLQKELGREPTEGELANATNMNVVQVR 300
           WKKMKIPPVLPSSEHTRLFKLVQPMKALI+VQE+LQKELGREPTE ELANATNMNV+QVR
Sbjct: 241 WKKMKIPPVLPSSEHTRLFKLVQPMKALIEVQEELQKELGREPTEAELANATNMNVIQVR 300

Query: 301 RQLEVGRAARNKLIKHNLRLVLFVINKYFEDFASGPKFQDLCQAGVKGLITAIDRFEPKR 360
           RQLEVGRAARNKLIKHNLRLVLFVINKYFEDFA+GPKFQDLCQAGVKGLITAIDRFEPKR
Sbjct: 301 RQLEVGRAARNKLIKHNLRLVLFVINKYFEDFATGPKFQDLCQAGVKGLITAIDRFEPKR 360

Query: 361 RFRLSTYALFWIRHAIIRSMTLSSFTRVSFGLDSVRVEIQRAKLELLFELHRLPTEEEIV 420
           +FRLSTYALFWIRHAIIRSMTLSSFTRVSFGLDSVRVEIQRAKLELL ELHRLPTEEEI+
Sbjct: 361 KFRLSTYALFWIRHAIIRSMTLSSFTRVSFGLDSVRVEIQRAKLELLCELHRLPTEEEII 420

Query: 421 AKVGISPERYLEVMRATKPVYSLHSRHATTSEEFINGITDVEGAGGDNRRQPALLRLALD 480
           AKVGISPERYLEVMRATKPVYSLHSRH+TTSEE INGITDVEG GGDNRRQPALLRLALD
Sbjct: 421 AKVGISPERYLEVMRATKPVYSLHSRHSTTSEELINGITDVEGTGGDNRRQPALLRLALD 480

Query: 481 DVLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVD 509
           DVLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVD
Sbjct: 481 DVLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVD 540

[Close]

BLAST of MC10g0077 vs. ExPASy TrEMBL
Match: A0A5D3BY73 (RNA polymerase sigma factor sigE OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11G00110 PE=3 SV=1)

HSP 1 Score: 876 bits (2264), Expect = 0.0
Identity = 466/547 (85.19%), Postives = 487/547 (89.03%), Query Frame = 0


Query: 1   MGVVTVSSSAARTPLRLGAKFSNHNSTLKRPTIVAFKADKHTNTTLVSPHEQVTLPVESN 60
           MGVVTVSSSAARTP RL AKFSNH STLKRP+IVAFKADKHTNTTLVSPHEQVTLPVESN
Sbjct: 1   MGVVTVSSSAARTPFRLSAKFSNHGSTLKRPSIVAFKADKHTNTTLVSPHEQVTLPVESN 60

Query: 61  NRTKKRSGKTSKSLKRVKAVFTDEASPCTSEVDYNEAAAKLENIFNLSPMTDDTDVESKD 120
           NR+KKRSG TSK LKRVKAV  DEA+ C+ ++DYNEAAAKLENIF LSPMT+D+D+ESKD
Sbjct: 61  NRSKKRSGNTSKPLKRVKAVLIDEATSCSLDLDYNEAAAKLENIFKLSPMTEDSDMESKD 120

Query: 121 GRLRSGQQRRKKSDKRSGDGIIRNQTKRIKRLDLDKRIALKN------------------ 180
           GR + GQQR K+SDKR  DGI+RN+TKRIKRLDLDKRIALKN                  
Sbjct: 121 GRSKRGQQRSKRSDKRPSDGIVRNKTKRIKRLDLDKRIALKNKKEGRAVALLKKQKDTKN 180

Query: 181 --------------------NKEDKAAPSLKKQKETKNEADEIDDLVRDYSASTDLVSLD 240
                               NKE KAAPSL+KQKETKNE DEID LVRDYSASTDLVSLD
Sbjct: 181 EADEIDGLRLDLEKRIALKSNKEGKAAPSLRKQKETKNEDDEIDRLVRDYSASTDLVSLD 240

Query: 241 WKKMKIPPVLPSSEHTRLFKLVQPMKALIQVQEDLQKELGREPTEGELANATNMNVVQVR 300
           WKKMKIPPVLPSSEHTRLFKLVQPMKALI+VQE+LQKELGREPTE ELANATNMNV+QVR
Sbjct: 241 WKKMKIPPVLPSSEHTRLFKLVQPMKALIEVQEELQKELGREPTEAELANATNMNVIQVR 300

Query: 301 RQLEVGRAARNKLIKHNLRLVLFVINKYFEDFASGPKFQDLCQAGVKGLITAIDRFEPKR 360
           RQLEVGRAARNKLIKHNLRLVLFVINKYFEDFA+GPKFQDLCQAGVKGLITAIDRFEPKR
Sbjct: 301 RQLEVGRAARNKLIKHNLRLVLFVINKYFEDFATGPKFQDLCQAGVKGLITAIDRFEPKR 360

Query: 361 RFRLSTYALFWIRHAIIRSMTLSSFTRVSFGLDSVRVEIQRAKLELLFELHRLPTEEEIV 420
           +FRLSTYALFWIRHAIIRSMTLSSFTRVSFGLDSVRVEIQRAKLELL ELHRLPTEEEI+
Sbjct: 361 KFRLSTYALFWIRHAIIRSMTLSSFTRVSFGLDSVRVEIQRAKLELLCELHRLPTEEEII 420

Query: 421 AKVGISPERYLEVMRATKPVYSLHSRHATTSEEFINGITDVEGAGGDNRRQPALLRLALD 480
           AKVGISPERYLEVMRATKPVYSLHSRH+TTSEE INGITDVEG GGDNRRQPALLRLALD
Sbjct: 421 AKVGISPERYLEVMRATKPVYSLHSRHSTTSEELINGITDVEGTGGDNRRQPALLRLALD 480

Query: 481 DVLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVD 509
           DVLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVD
Sbjct: 481 DVLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVD 540

[Close]

BLAST of MC10g0077 vs. TAIR 10
Match: AT5G24120.1 (sigma factor E )

HSP 1 Score: 614.0 bits (1582), Expect = 1.1e-175
Identity = 329/517 (63.64%), Postives = 407/517 (78.72%), Query Frame = 0


Query: 1   MGVVTVSSSAARTPLRLGAKFSNHNSTLKRPTIVAFKADKHTNTTL-VSPHEQVTLPVES 60
           MGVV++SSSAAR+PL LG     H S+LK+P+IVAFKAD  +N+ L + P EQV +P E 
Sbjct: 1   MGVVSISSSAARSPLGLGNDLLTHRSSLKKPSIVAFKADDSSNSALIIPPREQVLIPAEK 60

Query: 61  NNRTKKR--SGKTSKSLKRVKAVFTDEASPCTSEVDYNEAAAKLENIFNLSPMTD---DT 120
           +N  K+     K  K+ K+  ++  + A  C+  VDYNEAAA+LE+I+ LSP T    + 
Sbjct: 61  HNEKKREVTRRKPCKTPKKPLSLEHNSAPSCSLGVDYNEAAARLESIYKLSPATTTLVED 120

Query: 121 DVESKDGRLRSGQQRRKKSDKRSGDGIIRNQTKRIKRLDLDKRIALKNNKEDKAAPSLKK 180
           DVE    + +  ++R++K        ++RN  K+ KR+ LDKRIALK N ++K   +   
Sbjct: 121 DVEDGGSKAKVSRRRKRKESGEEKKVVVRNNVKKEKRMSLDKRIALKRNVQEKPVVASVD 180

Query: 181 QKETKNEADE--IDDLVRDYSASTDLVSLDWKKMKIPPVLPSSEHTRLFKLVQPMKALIQ 240
           +K TK + +E  I+ LVRDYSAS D+VSLDWKKMKIPPVL S+EH  LFKL+QPMKAL++
Sbjct: 181 KKVTKRQQEEEKIERLVRDYSASNDIVSLDWKKMKIPPVLSSTEHAWLFKLMQPMKALLE 240

Query: 241 VQEDLQKELGREPTEGELANATNMNVVQVRRQLEVGRAARNKLIKHNLRLVLFVINKYFE 300
           V++ LQK LGREP E E+A   NM   +V++++E+GRAARNKLIKHNLRLVLFV+NKYF 
Sbjct: 241 VKDVLQKSLGREPREAEIAGEINMTAGEVKKKIEIGRAARNKLIKHNLRLVLFVMNKYFH 300

Query: 301 DFASGPKFQDLCQAGVKGLITAIDRFEPKRRFRLSTYALFWIRHAIIRSMTLSSFTRVSF 360
           +F +GPKFQDLCQAG++GLITAIDRFEPKR+FRLSTY LFWIRHAIIRSMT S+FTRV F
Sbjct: 301 EFTNGPKFQDLCQAGMRGLITAIDRFEPKRKFRLSTYGLFWIRHAIIRSMTTSNFTRVPF 360

Query: 361 GLDSVRVEIQRAKLELLFELHRLPTEEEIVAKVGISPERYLEVMRATKPVYSLHSRHATT 420
           GL+SVRVEI +AK EL FE+ R PTE+E+V ++ I+PERY EV+RA KPV SL+S+H+ T
Sbjct: 361 GLESVRVEIYKAKTELWFEMGRPPTEDEVVERLKITPERYREVLRAAKPVLSLNSKHSVT 420

Query: 421 SEEFINGITDVEGAGGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRTLGE 480
            EEFINGITDV+G G +N RQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKG+RTLGE
Sbjct: 421 QEEFINGITDVDGVGANNSRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGE 480

Query: 481 IAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYLI 510
           IAGNLNISREMVRKHEVKALMKLKH ARVDYLR+Y++
Sbjct: 481 IAGNLNISREMVRKHEVKALMKLKHQARVDYLRQYIV 517

[Close]

BLAST of MC10g0077 vs. TAIR 10
Match: AT1G08540.1 (RNApolymerase sigma subunit 2 )

HSP 1 Score: 145.6 bits (366), Expect = 1.1e-34
Identity = 104/347 (29.97%), Postives = 179/347 (51.59%), Query Frame = 0


Query: 167 KAAPSLKKQKETKNEADEIDDL--VRDYSASTDLVSLDWKKMKIPPVLPSSEHTRLFKLV 226
           K   S KK++    E D  D L  +R  ++S+ L+++              E   L   +
Sbjct: 239 KTGSSPKKKRLVAQEVDHNDPLRYLRMTTSSSKLLTV-------------REEHELSAGI 298

Query: 227 QPMKALIQVQEDLQKELGREPTEGELANATNMNVVQVRRQLEVGRAARNKLIKHNLRLVL 286
           Q +  L ++Q +L +  GR+PT  + A+A  ++   +R+++  G   ++K+IK N+RLV+
Sbjct: 299 QDLLKLERLQTELTERSGRQPTFAQWASAAGVDQKSLRQRIHHGTLCKDKMIKSNIRLVI 358

Query: 287 FVINKYFEDFASGPKFQDLCQAGVKGLITAIDRFEPKRRFRLSTYALFWIRHAIIRSMT- 346
            +   Y     +G   QDL Q G +GL+   ++F+  + F+ STYA +WI+ A+ +S++ 
Sbjct: 359 SIAKNY---QGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSD 418

Query: 347 LSSFTRVSFGLDSVRVEIQRAKLELLFELHRLPTEEEIVAKVGISPERYLEVMRATKPVY 406
            S   R+ F +      ++ A+ +L  E  + P  EEI    G+S +R + V+ + KP  
Sbjct: 419 QSRMIRLPFHMVEATYRVKEARKQLYSETGKHPKNEEIAEATGLSMKRLMAVLLSPKPPR 478

Query: 407 SLHSRHATTSE-EFINGITDVEGAGGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGL 466
           SL  +       +    I D E    ++      +R  LD VLDSL  +E  VIR R+G+
Sbjct: 479 SLDQKIGMNQNLKPSEVIADPEAVTSEDILIKEFMRQDLDKVLDSLGTREKQVIRWRFGM 538

Query: 467 DGKGNRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYLI 510
           +    +TL EI   + +SRE VR+ E  A  KLK+  R ++L++YL+
Sbjct: 539 EDGRMKTLQEIGEMMGVSRERVRQIESSAFRKLKNKKRNNHLQQYLV 569

[Close]

BLAST of MC10g0077 vs. TAIR 10
Match: AT2G36990.1 (RNApolymerase sigma-subunit F )

HSP 1 Score: 122.5 bits (306), Expect = 9.9e-28
Identity = 109/401 (27.18%), Postives = 196/401 (48.88%), Query Frame = 0


Query: 110 MTDDTDVESKDGRLRSGQQRRKKSDKRSGDGIIRNQTKRIKRLDLDKRIALKNNKEDKA- 169
           + DDT+    D    S       S    G+ I+R++ ++++R   ++R    N+ +D+  
Sbjct: 157 LVDDTEANPSDNIKDSLSTSSSMSLPEKGN-IVRSK-RQLERRAKNRRAPKSNDVDDEGY 216

Query: 170 APSLKKQKETKNEADEIDDLVRDYSASTDLVSLDWKKMKIPPVLPSSEHTRLFKLVQPMK 229
            P     K+   +  + DD ++ +    +   L          L + E   L   +Q + 
Sbjct: 217 VPQKTSAKKKYKQGADNDDALQLFLWGPETKQL----------LTAKEEAELISHIQHLL 276

Query: 230 ALIQVQEDLQKELGREPTEGELANATNMNVVQVRRQLEVGRAARNKLIKHNLRLVLFVIN 289
            L +V+  L+ + G EPT GE A A  ++   ++  +  GR++R KLI  NLRLV+ +  
Sbjct: 277 KLEKVKTKLESQNGCEPTIGEWAEAMGISSPVLKSDIHRGRSSREKLITANLRLVVHIAK 336

Query: 290 KYFEDFASGPKFQDLCQAGVKGLITAIDRFEPKRRFRLSTYALFWIRHAIIRSMTLSSFT 349
           +Y      G  FQDL Q G  GL+ ++++F+P+   R +TYA +WIR +I +S+  +S T
Sbjct: 337 QYQN---RGLNFQDLLQEGSMGLMKSVEKFKPQSGCRFATYAYWWIRQSIRKSIFQNSRT 396

Query: 350 -RVSFGLDSVRVEIQRAKLELLFELHRLPTEEEIVAKVGISPERYLEVMRATKPVYSLHS 409
            R+   +  +  ++  A+   + E +  P++EE+   VG+S E+  +++  T+   S+  
Sbjct: 397 IRLPENVYMLLGKVSEARKTCVQEGNYRPSKEELAGHVGVSTEKLDKLLYNTRTPLSMQQ 456

Query: 410 RHATTSEEFINGITDVEGAGGDNRR-QPALLRLALDDVLDSLKPKESLVIRQRYGLDGKG 469
              +  +     IT   G           L+R  + ++L+ L PKE  +I+ R+G+DG  
Sbjct: 457 PIWSDQDTTFQEITPDSGIETPTMSVGKQLMRNHVRNLLNVLSPKERRIIKLRFGIDGGK 516

Query: 470 NRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRY 508
            R+L EI     +S+E VR+ E +AL +LK       L  Y
Sbjct: 517 QRSLSEIGEIYGLSKERVRQLESRALYRLKQNMNSHGLHAY 542

[Close]

BLAST of MC10g0077 vs. TAIR 10
Match: AT1G64860.1 (sigma factor A )

HSP 1 Score: 97.8 bits (242), Expect = 2.6e-20
Identity = 92/299 (30.77%), Postives = 145/299 (48.49%), Query Frame = 0


Query: 211 VLPSSEHTRLFKLVQPMKALIQVQEDLQKELGREPTEGELANATNMNVVQVRRQLEVGRA 270
           VL   E  RL K ++    L   +  L+  LG EP++ +LA +  ++  +++  L     
Sbjct: 199 VLSHVEVVRLSKKIKSGLRLDDHKSRLKDRLGCEPSDEQLAVSLKISRAELQAWLMECHL 258

Query: 271 ARNKLIKHNLRLVLFVINKYFEDFASGPKFQDLCQAGVKGLITAIDRFEPKRRFRLSTYA 330
           AR KL   N+RLV+ +  +Y      G +  DL Q G+ GL+  I++F+  + FR+STY 
Sbjct: 259 AREKLAMSNVRLVMSIAQRYDN---LGAEMSDLVQGGLIGLLRGIEKFDSSKGFRISTYV 318

Query: 331 LFWIRHAIIRSMTLSSFT-RVSFGLDSVRVEIQRAKLELLFELHRLPTEEEIVAKVGISP 390
            +WIR  + R++  +S T R+   L      I+ AKL L  E    P+ + I   + +S 
Sbjct: 319 YWWIRQGVSRALVDNSRTLRLPTHLHERLGLIRNAKLRLQ-EKGITPSIDRIAESLNMSQ 378

Query: 391 ERYLEVMRATKPVYSLHSRHATTSEEFINGITD---VEGAGGDNRRQPALLRLALDD--- 450
           ++      A   V+SL  R A  S   + G T    +     +N        LAL +   
Sbjct: 379 KKVRNATEAVSKVFSL-DRDAFPSLNGLPGETHHSYIADTRLENNPWHGYDDLALKEEVS 438

Query: 451 --VLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNISREMVRKHEVKALMKLKHPAR 501
             +  +L  +E  +IR  YGLD K   T  +I+  + +SRE VR+  + AL KLKH AR
Sbjct: 439 KLISATLGEREKEIIRLYYGLD-KECLTWEDISKRIGLSRERVRQVGLVALEKLKHAAR 491

[Close]

BLAST of MC10g0077 vs. TAIR 10
Match: AT3G53920.1 (RNApolymerase sigma-subunit C )

HSP 1 Score: 81.6 bits (200), Expect = 1.9e-15
Identity = 106/437 (24.26%), Postives = 191/437 (43.71%), Query Frame = 0


Query: 90  SEVDYNEAAAKL----ENIFNLSPMTDDTDVESKDGRLRSGQQRRKKSDKRSGDGIIR-- 149
           S + YN  A  L    E    L  +  + D+  + G+L + +  +    +  G  I    
Sbjct: 144 SMLQYNLLAKNLLALEETFVALDSVRMERDIMLQMGKLGAAELFKTCLSRYRGSSITSCL 203

Query: 150 NQTKRIKRLDLDKRIALKNNKEDKAAPSLKKQKETKNEADEIDDLVRDYSASTDLVSLDW 209
           + T  +     ++++ + + ++ K     KK + +   A+  D         T   ++D 
Sbjct: 204 SDTTELVDTTPNQQVFVSSRRKVK-----KKARRSSVTAENGDQSSLPIGLRTTWNNIDV 263

Query: 210 KKMKIPPVLP------SSEHTRLFKLVQPMKALIQVQEDLQKELGREPTEGELANATNMN 269
            +++ PP         S   T +   V+ +  + +++  L++E G+  +    A A  MN
Sbjct: 264 PRVRRPPKYRKKRERISRNETEMSTGVKIVADMERIRTQLEEESGKVASLSCWAAAAGMN 323

Query: 270 VVQVRRQLEVGRAARNKLIKHNLRLVLFVINKYFEDFASGPKFQDLCQAGVKGLITAIDR 329
              + R L  G   R++L+K    LVLF+   Y      G   +DL QAG  G++   +R
Sbjct: 324 EKLLMRNLHYGWYCRDELVKSTRSLVLFLARNY---RGLGIAHEDLIQAGYVGVLQGAER 383

Query: 330 FEPKRRFRLSTYALFWIRHAIIRSMTLSSFTR-VSFGLDSVRV--EIQRAKLELLFELH- 389
           F+  R ++ STY  +WIR ++  S  +S   R V      +R    IQ+A+ + L   H 
Sbjct: 384 FDHTRGYKFSTYVQYWIRKSM--STMVSRHARGVHIPSSIIRTINHIQKAR-KTLKTSHG 443

Query: 390 -RLPTEEEIVAKVGISPERYLEVMRATKPVYSLHSRHATT-SEEFINGITDVEGAGGDNR 449
            +   +EEI    G S ++     +  K V S+  +     + +F+    D      +  
Sbjct: 444 IKYAADEEIAKLTGHSVKKIRAANQCLKVVGSIDKKVGDCFTTKFLEFTPDTTMESPEEA 503

Query: 450 RQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNISREMVRKHEVKA 509
                 R  + D+L+ L+P+E  V+  RYGL     ++L EI   L +S+E +RK E +A
Sbjct: 504 VMRQSARRDIHDLLEGLEPREKQVMVLRYGLQDYRPKSLEEIGKLLKVSKEWIRKIERRA 563

The following BLAST results are available for this feature:

BLAST of MC10g0077 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZNX9	1.5e-174	63.64	RNA polymerase sigma factor sigE, chloroplastic/mitochondrial OS=Arabidopsis tha...	[more]
P26683	2.1e-38	31.48	RNA polymerase sigma factor SigA OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UT...	[more]
P38023	1.3e-35	30.46	RNA polymerase sigma factor SigA1 OS=Synechococcus elongatus (strain PCC 7942 / ...	[more]
P74565	2.2e-35	35.74	RNA polymerase sigma factor SigA OS=Synechocystis sp. (strain PCC 6803 / Kazusa)...	[more]
P52322	6.9e-34	36.29	RNA polymerase sigma factor SigA OS=Microcystis aeruginosa OX=1126 GN=sigA PE=3 ...	[more]

BLAST of MC10g0077 vs. NCBI nr


Match Name	Identity	Description
XP_022140941.1	100.00	RNA polymerase sigma factor sigE, chloroplastic/mitochondrial [Momordica charant...	[more]
XP_038903010.1	91.94	RNA polymerase sigma factor sigE, chloroplastic/mitochondrial [Benincasa hispida...	[more]
XP_022922776.1	90.37	RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like isoform X2 [C...	[more]
XP_023552213.1	90.37	RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like [Cucurbita pe...	[more]
XP_022922775.1	90.37	RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like isoform X1 [C...	[more]

BLAST of MC10g0077 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A6J1CHI4	100.00	RNA polymerase sigma factor sigE, chloroplastic/mitochondrial OS=Momordica chara...	[more]
A0A6J1E518	90.37	RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like isoform X2 OS...	[more]
A0A6J1E9R5	90.37	RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like isoform X1 OS...	[more]
A0A5A7U8E5	85.37	RNA polymerase sigma factor sigE OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27...	[more]
A0A5D3BY73	85.19	RNA polymerase sigma factor sigE OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]

BLAST of MC10g0077 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G24120.1	1.1e-175	63.64	sigma factor E	[more]
AT1G08540.1	1.1e-34	29.97	RNApolymerase sigma subunit 2	[more]
AT2G36990.1	9.9e-28	27.18	RNApolymerase sigma-subunit F	[more]
AT1G64860.1	2.6e-20	30.77	sigma factor A	[more]
AT3G53920.1	1.9e-15	24.26	RNApolymerase sigma-subunit C	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000943	RNA polymerase sigma-70	PRINTS	PR00046	SIGMA70FCT	coord: 469..484 score: 38.47 coord: 302..315 score: 50.0 coord: 326..334 score: 63.94 coord: 484..495 score: 49.09 coord: 448..460 score: 38.21
IPR007627	RNA polymerase sigma-70 region 2	PFAM	PF04542	Sigma70_r2	coord: 275..341 e-value: 4.6E-11 score: 42.3
IPR007624	RNA polymerase sigma-70 region 3	PFAM	PF04539	Sigma70_r3	coord: 230..270 e-value: 6.9E-7 score: 29.3 coord: 359..422 e-value: 3.9E-12 score: 46.1
None	No IPR available	GENE3D	1.10.1740.10		coord: 266..343 e-value: 1.8E-22 score: 80.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 109..146
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 132..146
None	No IPR available	PANTHER	PTHR30603	RNA POLYMERASE SIGMA FACTOR RPO	coord: 2..509
None	No IPR available	PANTHER	PTHR30603:SF4	RNA POLYMERASE SIGMA FACTOR SIGE, CHLOROPLASTIC/MITOCHONDRIAL	coord: 2..509
IPR007630	RNA polymerase sigma-70 region 4	PFAM	PF04545	Sigma70_r4	coord: 444..497 e-value: 1.8E-13 score: 49.8
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 432..509 e-value: 9.7E-21 score: 75.2
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 348..400 e-value: 1.4E-7 score: 33.5 coord: 222..265 e-value: 2.1E-6 score: 29.7
IPR014284	RNA polymerase sigma-70 like domain	TIGRFAM	TIGR02937	TIGR02937	coord: 271..497 e-value: 1.7E-23 score: 81.0
IPR013324	RNA polymerase sigma factor, region 3/4-like	SUPERFAMILY	88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors	coord: 356..412
IPR013324	RNA polymerase sigma factor, region 3/4-like	SUPERFAMILY	88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors	coord: 435..508
IPR013325	RNA polymerase sigma factor, region 2	SUPERFAMILY	88946	Sigma2 domain of RNA polymerase sigma factors	coord: 193..342

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC10g0077.1	MC10g0077.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071482	cellular response to light stimulus
biological_process	GO:2000142	regulation of DNA-templated transcription, initiation
biological_process	GO:0006352	DNA-templated transcription, initiation
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0016987	sigma factor activity
molecular_function	GO:0003700	DNA-binding transcription factor activity