MC10g0043 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC10g0043
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	RNA-binding KH domain-containing protein RCF3
Location	MC10: 262336 .. 274990 (-)
RNA-Seq Expression	MC10g0043
Synteny	MC10g0043

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5polypeptideCDSutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

GGAAAATATTAGAAATATTATTAGGATTATTCCTACAAATTAAGAGTTAAACTGCATCCTTTTATCCACTGTGATTAAGAATCAAGATGAAACAAAAGCAAGAGGGGAGGTTGAAAATGAAATAACGGCGTCGTTTTGGATGGCAGCTGGACTGAACATCTTACATCACAGGTTAGAGAAGTAAAGGAAGTAAACTCCGGAAGTGGTGAAGCAGATGGATTCGTATTTGCATCAGTTCCTCTTCAATTCCTCTTCTTCTTCTTCTTCCCCTGTTCCTTCTTCTTCTTCTGGGGTTTTTAATTGCAAAAGTTTCCCCGGACTTTCGTTGGAAACAAGCAGAAAGACAGAATCGAAGGAACGGAGTTTGTCCTAAGGTTTTTGGAACAGAGGAATCTAACCTACTTACGAGTTACAGATATTGGACCCCTTTACTCCAGCAGATTGTAACAAAACTGGAAAATCAAAGCCATTGACATCGAATTTCTATGACTGTAATAGCTTGGCATTGAAAACAACTGAACCGGGGGGTAAGCATTATTTTTCCAATCCAAAACCCTAACATTTGAGATGGAGAAGTCTAGATCTAAGAGAAACTACTACTATGACCACCAAGACTATGATTCGGAGGCGATGGGTAGAACCAGACCTCGTTACAACAATCACTACGCCAATAATAACTATCGTCACCGTGGAAGTGCAGCCCGGCCGTCTAAACCTCAAGACCAATCTCTTATGGTGACCACGACTTACAGGATTCTCTGTCACGACGCCAAGGCCGGGGGAGTTATCGGCAAATCCGGTAGCATCATTAAGTCCATTAGGCAGCACACCGGCGCGTGGATCAACGTGCATGAGCTAGCTCCGGGCGATGAGGAGAGAATAATTGAAATATCGGACACCCGGCGGCGGGACCCGGAAGGCCGGATTCCGCCGTTCTCTCCGGCGCAAGAAGCACTTTTCTTGATTCATGATAGGATTCTTGAGAGTGACATGAGTCCTGGGTTTAACGGAATGGGGTATGGTGCTGAGGACGAGGATGATGATTACGGTGGGGTTAGGGGAGGAGCTGGCGGTGGTGGTGGCGGTGGCCGTGTAGCAACAAGGCTTGTCGTGTCAAGAATGCACGTCGGTTGTTTGCTAGGGAAGGGAGGAAAGATAATCGAGCAAATGAGGATGGAAACCAAGACCCAGATAAGGATTCTACCTAGAGATCACAATTTGCCTCGTTGCATTTCAATGTCGGAGGAGATTGTTCAGGTTTAGTTTAAGAACACTTCAGTATCCTGAAATAATTTCCCCTTTCTTGTTGCTGTAGTAATTTAAAAAATATTGAGCTTTGAATTCTTTTCGATCAAATCTTACTAGTCTACCTCTTCCTAAGTCTGCATGATTCTACTCGTGCCGGGTCAGGTTTAAAGGAAGCTAATTTACTTTTGGAATGCTTAATCAAAGTTGCTAATTGGGTGCTGAAAACATGTTAGAACGTTTAATAAGACATTGTTCGAAATGGTATCTATTAGAAGCTTAATAATGCGGTTACAGGTTCTTTGAATCTGCTACCGCTGTCTTTGCTTCACTAGCTATTTAAGAAACTAAAAGAGTTCGACCAGAAATCATTTTTTTTTTTAACATAACACCTTTGTTTGTTACTGCACATCTTACTCGATGGGTGAGTGTAGAAAAGCTAGTCATGTTATCAGGAAGTTTTCTGTGGGGATATCACATCTATCTTGCATATTACATTGTTCGGCCTTTCATATGCTGATTCTTGAGTTGACTGTTGAACCAACTTATTCCGTTACTAATTTTACCTGTCTTCTGAACTTGTTAAACATACAGAAAAGATATAACAGACACTCAGTATCATTTTGTTGATCTTTGCTCATATTAGCATAAATTCTACTATTCTGCAGATTGGAGGTTCAAAAGCTGTCTTGAAATAAATTATGTAAGATTGGTGTGATAATCTAACGGGTGTGCATTGGGGTTCCAATTTTTGGAGCCAAGTTAGATCCCTCATCTATCTATGGTTGCTACCTAATCAGGCTTTAGTTAACTTAATCATGAGCACTGTATTGATGCAAAATGAATTAAGGAAATGGATATGGTGACATGAACAATTGTATTTCTATTGTAAGTTTTCATGACTTCATATTCCATTTGTCGAGTTATGAAGAATATCTAAGTATTAATTGGTTTTCCTATTGGGTTTTTAACCCTCTGTAGATTGTTGGTGATGCAAATGCTGTGAAGAATGCTATAGCTATCGTTTCATCACGCTTGAGAGAGAGTCAGCATCGTGATCGTAGTCATTTACATGGACGTCTGCATTCACCGGAACGTGGTTTCCCTCCTGATGATGATTATGTTCCAAATATAAGCAATACAGGGCGACGGTTATCAATGGATGGACGAACATTTAGATCACGTGCTTCTAATGCAAGAGGCAATGACTATTCCAACCGTCAATCTAGTTTTTCAATAGAGCCTGGGGCCCCTCCTGTTAGTGACAATGTGATGCCCTTTTACGGGGAGGACCTTGTATTTAGAATATTATGCCCAATTGACAAAGTTGATAGTGTTATTGGAGAGTCTGAAGGAATTATAGAATTACTACGGAATGAAGTTGGTGTGGATATCAAGGTTTCCGACCCTGTAACTGGTTCAAACGAACGGATTCTTACCATTTCCTCGGAGGAGGTACTTCAACCCTTTTTTCTTCCTTAATAGATACTATACACCATGATTTACTGTTTCCAAAGGACAAATCACTTGAGTATGCCTTTCCCTTGCCGAAGATATATTGGGAGTTATATAAACACTCATCAAACTGACTTCAAAAGTTATGTTTTCCATTTATTATATTAATATTTCTTTGTTTAACTTTCTGATTGGCCAATTTGAGTTCTTAGGGTCCAGACGATGAGCTCTTTCCAGCACAGGAAGCTTTGTTACACATCCAAACTCACATTGTTGATCTCATTCCTGATAAGGATAACGTTGTAACTACTAGGTTGCTTGTCCCATCAAGTGATATTGTATGTTTGGAGGGAAGAGATGGATCATTGTTAGAGATGAAGAGATTAACTGGTGCAAATATACAAATTGTGCCAAGAGAAGAACTTCCTGTGTTTGTATCAGGGGCTGATGAACTCATACAGGTCTGTCATTGAACTTTAAATTGATCGGGAGTTCCTAGATTCTATCAAAAATGCTTAATGTAACTTAGTTTTTGTGACTTCTTGTAGAAGACTTGTCTTAAATCAGCTCCCGAGTACGGTCCTGGACTGTAAAAGTTTACGGTCTTTGAACCACTAAATACTCATATCATTCATATTATAAGTTGAAAATGCAGTTAACGAATTGTCAGATCATTAGAAACTATAGATCTTTTCCGAATTCTGATGCATATTGTCAAACCCAACTCCCCTATGCCCTGCAAAAAAAAAAAAAAAGTCTGGTTTATTATACTTGGGATCATAAATAGTCATTTGGTTTTTGAGTTAGAATAGTAAAACAAGTAAGGATCCATATTGCTGTGCTGGACGAGATGATTTGCTTTTAGAATTCCTAATTCCCTTACTGCAATGTTTGCAGATCGTAGGGGACATAAAAGCAGCTAGAGATGCACTTGTTGAGTTAACATCAAGATTACGGAGTTACCTTTATAAGGAGCCCTTCCAAAAAGATACAAGTCCTCCAGTCAGTTTAGGACTTGAGGAATCATCTTCAAATAATAATGTTGCAGCTCGTGAAGTTCATAGCGGAATTGATCCTTCTAGCACAGCCTATCAAAATGTGCAACCTTTTGGAACAGCACAACTGCTAAAGGTTACTTGTTTTCTTATCTTTATTCTTCTCTCTGGACGAGGGTCTTTTTTCTTTTCAAAATGGCCTCTTGTCAGACATTTTGAGTGGAGGTACTTCCTTTTTTTGGATGCGAAACTATGAGAGTGAGGTGCTTCTCCATAAAATACCTTTTTTAGGACAATGTAGTAAAAGATCCAACCAAAATTTGAAACATTCATGTAAAATCCCTTGAAGCAGCACTTGCAATTTTTAAAAATCCAACTGCCAAATGGTGTTTTGGTAGTCATGTGGTGGTTCAAGTCCCGATCTGGTGCAAATGAAAACGTCAGAGGTTCTCTTGTTTTTTGTGTCCAAAGGAAAGAAAATAATGTACTGTCCAGCCTAGGTGCACATTGTAGAAGTAACTTTTTCTTCAAATACATGAGTTTTATACGTTTCTTTCACATTATTATTTTGAAGTATTTGTAGCTTTGGCTAAATTATCTTGCTTTATTAATGTACACCTCTACTGAGACTTCAGTATTGCACCAAAATGACTCGTACTATCATTTGCAGGAAACTGGAGGATCGAGCAATGAAACTAGTAAGCAGAATGAAAATGACCGACGGGAAGATCTGCCTAGTGGGTTAAATAGGTATAACTTCAGCACTCTCATACTGGTTTCTCACCCCTTCGCAATTCTTTTGTAACAGTATGACGTTTTATTAGTTACAAATTATTCCATTGTCTTTTCCATGCTTCTCTTAGTTCCATTCCACTTCTCTTATAACTTAGATCCAATGGCTGTTCACTGTAACATATAAGTTTTCACATTTCTGTTAGGATACCTGTGCCGCTTGTTACTCGTAGTACACTTGAAGTTGTGATACCAGAGCCTGCCGTTCCGAAGCTTATAACAAAATCAAAAAACAAGCTTGCCCAGATCAGTGAGGTGGCATTAGTGAAATCTTGTGATAACCCTTGTGTAATATATTAAGAAACTTCCTTCATTGCGACGTTTTATTTTTAACAGTTGTCTGGAGCCAATGTTACGCTGGTAGAAGACAGACCAGATGTAACACAGAAGATAATTCAAATATCAGGTACACCAGAGCAGGCTGAGAGAGCCCAGAGCTTGTTGCAAGGCTTTATTTTGAGCAGTGAGTCTCTCCCACTAACCCATTTTGATTTTCTGTTACATTTCTAAGTTCATATTACTTTTTTTGCTCTGTATTTATTTGTTTATTCAACTGTTTTTGCAGTGCAAGAAGACGGCCCCTAAGTTTTGGCCCTTTGGTTTTAGTTTACCCCAAAATTAAGCTGCCCATAAAAGGATTGCCCCATCAGTCATCAGGTGTACGTGTATATCGCGGGGCTGTTGCTTCTAGACTCGGAATTGTGTCTCTTTTCAGCTGTGTTTCTGGAAGAGCTATGGGGGAAGAAAGAGCAAATTAACCATTGCCATGTAAATTTGGAATGTACAAGCGTTTCCATTCTTCAAAATCTCTCCTTTTTTCTTCTTTTTGTTGTTTCAGTAGGAAAGCAATTTCGGTATTATTCATCTCCGTAGTTATTGGAATCCGATTTTAAGCATGTCTTAGTTTTTGGGGTCCCCCCAATGGATACCATAATTATATGTACCTTAGTTTATTACCATAAAGAAAAAGGTTTTGATCTATGTCCATTTAATTTTGAAATTTTAAATTCTTTTTATGTATCTTTTTGTCATTGATAACGTTAATTGATTTTGATATTACTGGATAAACAAATTACAGCTAGTTTAGAACATGCTAAAACACTAGCTAGGTTGTATATATTTATTTATACAAAAAAAAAATCTAGTAATTGAACGAGAAATAAATTCTTTTGCAAGGAGGATGTTTGATTTAATTTTATGAAAAACATGCTCTCAATAATACAGTTTCTAAATTGTCAGAAAAAGTAAAAAATGAAATTAGGGTTAAGACATACTTAATAATTTGAGAGGACATTTTTCTTTAACTTATTGGGGAGGAAGGTCATTTATCCAAAAATAGTACGTTCGGGACAGTCTCGTCCGTAACAAATGTAGATATCATCCGAAACTGAAAGTGAAGATAGCACAGCGATGCGATGAGTACTCCAATCCCAACACTATCCTTTGTTTCTTCACCTGTAACTGTAATGGCTCTCTCTTTCCCCCTCTCACATTCCTTCTCCGGAAAATAAACTTGATCATGTAAACTTGTTTGCCGTTTTTCTTTTTCCGTTGTTGCAGAGGATAGAGGCGAGGGCGGGAATTTCTCATACCTTTAACTTTCCTCCGCGGTCGAAGGTTAAGATTTGAGATGTTCTTTCAACTACAAGGTTAACAATGTTCTCTCTGCCCCTCATTGTTCATGTTTTCTTGTTTAAGTTTTCAGGTGGTCGCCAGAAAGCAAAGAATTGATGAAGGTGGTGGTCGGCGAGTGTGGCGCCGAAGAAAATTGGTACGCATAACATGTCTATTCTCTCTCAAGTCTTAATTTCATCCTCGCCCACTATCTCTGATCTCATTTGTCTCACATGTTTTGTCACTCACCTAATCTGGAGGGGAGTTTTTTTCCCTCAACCGATTGAAGTTTGAGACTAGAAAATCGTTGGGAAAAGGGCGGATAAATTGGTCACAGTTCTAGGAATAAAGATTTTGGGTGGTAGAAGACTACAAGAGCGAGCATCTTTAGAAAACTGTAGGAGTCTAACCCATTATTGGCGCTTCACTCCCAGTGAAAAACAAATGGAAGCATCGGTATGTGCTGAATTCCCCTAAATGCATTTAAGAAACCAAGCAACTGAAGAAACTAACAAAACTGAAAGGAATCAAATTTGTTTGCGGATGAGTATTGTGACTGCCTGGAGCATTGGGAGCAGGACTATTCCTCTTGTTTGTAGTCTTTTCTCCTTCTTTTGTGGGAGAGTTGAGTAAGAATGTGAAATTTTGTCGATGCCTTCCTGTGGTAAGTGTTTCTTTGGTATTGATATTGTTTGTTAACTACAGCTGTAACAGAGATGAGTGAACTTTGGAAAAGGAAATTTACGCTACTTGGTGCTTTTTGCAGTAAATATTGGAGATGTTTGCCTTAATACTGACATGCTTGTTACTGCTTTTGTTCTTTTCTTTAATGCAACCAAATACATGTATGTGTCATAAAGCTAATGTAGGTTTGGGTGGAAATTTGAGAAGCAAGGAGATATCGAGATGATTACTCACCTCTAATTAGGCTTTTGAACTCTTGTACGAGAATGTGAGTTACATAATCTGGTATGGATAGAAAGGTGTAACAGCTTAGAGTTTGTTGAATCAAATAGAATACAGAGAGTGTTGTTGCAGATGAGGGCTATAAATATCTTAATGTAATTTAATGGAGGTCGGTTTTGTGGAGCCTGAGATCTTTTTGAATTGCGCCCAAAATATTTATTTTCTGAAACAGAACAACTTGGCTGAGGATTTGTCAGGGTATTTGATCGTCATCTTGATTTTTGATAGATACTTCTCTATGTCGTTCTCATTAGCATTGAAACTTTCAATTTGGTTCCTTATTTAGATGAAGAAGGATGATATGTCGCACTACAAGATGGATCGAATCCCATTCCTTGAAGAACAGGTGAGAAAGGTAAAGGAACAGGGGAAGCTTGTTACAATGGACATCGAAAGACTACTATTATCAGAGGATAACCGCTTCGACTTTGTGAATGAGGTTGCCGCTGAGGCTAAGGAATATGTAGAGAGCAACCGTGACGAATATGGGGGTTCCAAGAAAGCTATTCTTCATGTTCTCAGCAACCGAGTGAATGATGCTGGGTTTTATCGGCCAGATGCGTATGCAGAAGAAGACCCGTTCAAACCCGGACCTCATTATCTGAAAGAAGAATTTAATTGAAATTCACGAAATACATTTTCTTATACAAAGACTGTCAATGTATTAATCTACAATGTTTTCCCAGTTTTTTAATGTTCGCTTAAGGTGTTTCACTTCTGATTGAGAATCCTGCTTCAGTACCTCAAAAAAGTTCTTAAATTCATGTTCAGGCGATGTAAAAAGAGATGAATTAATTTCATTATTTTGGATAACTGGAATGTTTCAATCCATAGTAAGACATATTTAAGCTCTCTTAAATTTAGCCTCAAATTCCATTCCTTCGCGTATTTAAACTCCTCTCAAACCTCAACTTATTTCTCAAGAAAAAACAAGGGTCAAACTAACTGCCAAAATGCAAGCTAAAGCAGAGAAAGTCACAGTCAAGTTTAGAACTTTGGATGTGAGCCACACAGCTTTTACACTCGGACCCCACTTGGTGATGGTGAACCTGCATCTTCTCGTCTGTCCTAGGTTGGTTCATCTCTTCCCTTAGCTGTGGGCAAGATTCAAAATGCCTTAAAATATTGTATCTGATCCGTTAACCCAATTAGAGGCCTTCCTTCATTCTCTTATCTTTCCCTCTTAATTTAATCTCTATCTCCGAGTTTCTCCAAAAGTAATTGATTTGAATCACACCCAACTGGGTTGGTTTCCCGATTCGGCAAATGGCTTTGCTGAGTCCTCGGTTGCACAGATTCCGCCTAACCAAGCTCCACCATGCCTCCGCCTCCAAACCCACCAAGACAAACGACCTCACTGTCTCAAGAAAAAGCCGATGCTGCTCCGCCATAGCTATTGATGCTCCTTCTTCTTTAACGGATGCTGCGGGAATCAGATGGGGTTCCACTACTCTGCAAGGCTTGCGCGAAGAAATGGAGGACGATGCTGTTGTGCGATCTGATGGTCTTAATGGCTTCTCGTTTGCTGCAGTTTTCGACGGCCATGGCGGCTATTCCTCCGTCAAGTTCCTCAGGTGGGAAAAACAGGGCATCATGGGGTGAAATCTTTAGGCCTTAAGATTTTTGAAGTCCATTTATGGATATATCAAATTGTAGAGTGGAGGCCTTAACGCATCATTGATTTCTCCGTAATTCTGATGTTTGGCTTTAGTATAAATGCCGAAAATAAATAATATGCATGACACAAAAACGATTGTTGGACAAATGTCTAACAATTACTTTCCATATCATGAAAGTGAAGTGAACGTATGATTAGAGTGATAAAAGTTGAGATGGGTTTGTGTTATAATATGGACATCTTAAATGTGACCATTTTGGATTTTTTGTAGAAACACTGCCTTTGACAAATGTATTGTTGATGCATATTAGGGAGGAGCTGTATAAAGACTGTGTAGCAGCTTTACAAGGTGGCCTGCTGTTGAATGGAGGGGATTTTGAAGTGATAAAAGCGGCTTTGGAGAAGGCTTTTGATGATACTGATAAAAGATTACTGCTTTTGTAAGTGACAGATCCAGTTTTCCAGTTGGTTATGTTATATGATCTCAATGCAATTCTCTATTTGACGTAATGCCGCTCAACTTTTAAAGGCTTGAGGCAGCTGGGGAGGAAGATGAATCTGGTTCCACTGCAACTGTTGCATTCATACGAAACGATGTGCTGTTCATTTCACATGTTGGCGATTCATGCGTGGTAAGCACTGATCTGGTGATCTTCATATCATTTGCAAAGCTCCTTCTGTATTCCAATCATGTTTTTAAAGCTTGTAGGATAGGGAACTTGTTCAAGTCACCGACTTCATTTTCTAGTATGTTTTATAAGAAAGGAACATTGTAAAATATAATAAAAAACACATCCAGGGACATAAAAAAGATCTTATAAATTCATAGCCGATTTGTTCATGTAGGTTTTGTCACGTTCCGGAGGAGCACAGGTGTTGACTACTTCTCATCGGCCTTACGGAAACAACAGCACTTCACTGCAAGAAATTAGAAGAATTAGAGAAGCAGGTGGATGGGTGTGTGTTTCTCTTGAAATTGGCTGCATGTTTCAGTCTGCTTTCTTAGTCTCTGACACGTTGAAATGAATACTCTCAATATCATTTATCTAAAGCTCTAATTCTTCTTTGATGCATTAAAATTTAGATACTCATTACAGCTTTTGGTGTTTTTAGATTTCTAACGGAAGAATCTGTGGGGACATCTCTGTATCTCGTGCATTTGGTGACATACGATTCAAGTCAAAGAAAAACGAGTTCGGTCCTTTTACTCTATTCTAATATTCTCCAGCTTAAGAATATTTATTTTTACAGAGCCAATAATATTGTACTTATACTGATTACCACATGCCTCTCCTGATGGCTTATTCAATATAAAAGTATGCTACAGAAGGGAGTTCAAGAAGGCAGATGGTCTGAAAAATTTGTTTCTCGGTAGGTATGCTTTATGATTCCTCACCTCTCATTATTATTTCATTTTTCGATACTAATTGTATAGTGTTTGGCTTGTTTTACTCACTACTGTTTGCTAGATCTTTTTAGTCAATTATTCCAAATGCTAATCGACTTTATGAGGCAGTTTGACCATAGATAATTTTACCTATCAGTGTACAGTTCAATGGAGACTTGGTTACTTCATTACCAGAAATTTTTCAAGTTACTCTCGGATCAAATGTCGAGTTTATACTGATAGCGTCGGACGGTCTATTGGATTACATGAACAGGTCCGTTGGAACTTATTTTTCCCCCAGCAGTTTGGATTGAATTTTTATATTCTGAAGTTAATTTTTCAGACTCTTCATCAACTTTGATCTAGACAGACTAAATAACTGCCGTTTTGGGTTTTATTTCAGTTCCGATGCAGTTAAGTTTGTTCGGAATCACCTCAGACAGAACGGCGATGTTCAGGTGATCACATAAAGCACCGCATCTGTCTGGCATCTGCTTATGGTTCAACTTCTAACTTCTCATGTACTTTGATTTTTAATTTCAGCTAGCTTGTGAAGCCCTCGCTCAAGCAGCCTTGGTACTACTGCATGGTCAATTTGATTTATTTGAAAGCTTCCAATTAGAAGAATCTGCTTTTTAGTTCTATTGAATCAAATGTTATTTTGTATCCTGCAGGAAAATGGGTCACAAGACAATATCAGCATTATCATGGCTGATTTAGGGTGAGTATCTTGCTTATTTCCAAATGCATAGAATGAACAAAATTTATCCTGATTTAAACTAACTGGCGATGCAGGCGGACAGATTGGAAGAATTTGCCCCTTAAGCAAGACAATGTCATATTCGAACTGGCTCAAGCTTTCGCAACGATCGGGGTAGTTTCTTTCGGTATTTGGTGGGCATCCTCTATTTTCACTCTTTAAAGTTGTTGTCTCTCACTATTGTATAACCAGGTTCATCTTCCATACTTGTCATCTGTAAAGTGTAATTGAATAGTTATACAATGTATCACATCTTACCACTGCTAGTTTAGACAACTTAACATGCCCTCACAAGAGTTGCAGAATTCTTCTTTCCCATGTGGTTTGGGTCGATTGAACTGTCATTCTTCAGGAAATGTAATGCCTTAACTATCATGCCTGTAAAACTACACACAAACTTTTTGGTTCACATTCTACACCTTCCATCAAGATTCACAACTTTTCAATTTGAAGGTCTTATTTTGTCCATGAGGAACCTTACCAGGAGAGTTTACATCTTTCATCAGAAGTTTACACATGTTTTCAAGACAATCCAACATTCTGGTACGAACTCAAACGTTTTACTTATGTCTTGTTGTCTTGGCGGGAAGGTTAAGTCTATGAATTCCATTGTTCAGATTGGTTGGTTGGATTGTTTAGAGCAGCACTGTGTTGACTACGACATTCTGATCATCAGTGGTTATTTTGATTTTGATCATCAGTGGTTATTTTGATTTTCCAAACAAAATTGAGAGATCAGATAGCCATTCTCATGGTAACAGGGAAACGGAACGACACGCCAGTATCTGGTTTGAATCTTTAAACACAGCTAGTCTACTGCCTAAATATTAGTTGCCATTTTCATTTCAAACAGTCCCCATCAAGATTGGCCTTCATAATAAATGCAATTTCAGAAATTGTGCCATGCTATTTTCTTTCTGTTTCTTTTCTTTCTGCATATGGTTATCATATATTGTTTGAAATTAAGACCATAGAGTTATTTTGAGGTTACATATCTATTGCTGAAGATGACGTTTGATTCCTTTCTCATATGCTAGGACGGATGATATTTGCATTTTTTTTTTCTCTGATATTAACAAACATTCAAACCCTAGAACCAAACCGACTATTTATATTCTTACCACAAACAGAGTTGCACCATGAAACTCGCTTGCATTCCTACTACCTCAACACTAACAGACCCATTTCTTTATCATTATTTGGTTCAAGGAAACACAGGAATCACGAGTCCTACCTATGGCTTCCCGGTGCCAGGTTTCGGAGGCTCGTGCTTACGGTTAGGTACAGGATCCTCGTAATCTAGTCTCTCAATCATCAAAAACTTCTTAGTCACTGATTGGAATCCATCCTTCATGAAAGAAAAGATTTCTGTTAGATAACCTAGACAAAGTAAGTAGAACTTCCAGAGGTTAAAATTTGCCTCTTAGTGAAAATTACTCGCAGGGAAGAATTCTTCGTTCTCCATATCAGATTTCTGAAAATATATGAAACCCATCAAAATTCTAGATTACGAATTAGGAATATCGCGATGTTGAAAACATCATGTTTGATACTTATATAATCTTTGGATCTCTCGTAGCAGGGCAGTTGTTGAAGAGAAAAGTAAATAGCTTTCAAACACGAAAAAGTAAATATTCAACAATTTCTCCACAGATCTGCTATGCTTTACAGTACCTTGTGAGGAGAGTGATGAAGACTCATCTGAGTGTTGAAATCCCCAAACTCTTCTGCAACTGTAATGGAAAGATGGAAAGAGAGGAGGTTGGTTATATTTGTGTAAGCTATGGGGTATTGAACAAAAATTTTCTCACCTGAAGAGAAGG

mRNA sequence

GGAAAATATTAGAAATATTATTAGGATTATTCCTACAAATTAAGAGTTAAACTGCATCCTTTTATCCACTGTGATTAAGAATCAAGATGAAACAAAAGCAAGAGGGGAGGTTGAAAATGAAATAACGGCGTCGTTTTGGATGGCAGCTGGACTGAACATCTTACATCACAGGTTAGAGAAGTAAAGGAAGTAAACTCCGGAAGTGGTGAAGCAGATGGATTCGTATTTGCATCAGTTCCTCTTCAATTCCTCTTCTTCTTCTTCTTCCCCTGTTCCTTCTTCTTCTTCTGGGGTTTTTAATTGCAAAAGTTTCCCCGGACTTTCGTTGGAAACAAGCAGAAAGACAGAATCGAAGGAACGGAGTTTGTCCTAAGGTTTTTGGAACAGAGGAATCTAACCTACTTACGAGTTACAGATATTGGACCCCTTTACTCCAGCAGATTGTAACAAAACTGGAAAATCAAAGCCATTGACATCGAATTTCTATGACTGTAATAGCTTGGCATTGAAAACAACTGAACCGGGGGGTAAGCATTATTTTTCCAATCCAAAACCCTAACATTTGAGATGGAGAAGTCTAGATCTAAGAGAAACTACTACTATGACCACCAAGACTATGATTCGGAGGCGATGGGTAGAACCAGACCTCGTTACAACAATCACTACGCCAATAATAACTATCGTCACCGTGGAAGTGCAGCCCGGCCGTCTAAACCTCAAGACCAATCTCTTATGGTGACCACGACTTACAGGATTCTCTGTCACGACGCCAAGGCCGGGGGAGTTATCGGCAAATCCGGTAGCATCATTAAGTCCATTAGGCAGCACACCGGCGCGTGGATCAACGTGCATGAGCTAGCTCCGGGCGATGAGGAGAGAATAATTGAAATATCGGACACCCGGCGGCGGGACCCGGAAGGCCGGATTCCGCCGTTCTCTCCGGCGCAAGAAGCACTTTTCTTGATTCATGATAGGATTCTTGAGAGTGACATGAGTCCTGGGTTTAACGGAATGGGGTATGGTGCTGAGGACGAGGATGATGATTACGGTGGGGTTAGGGGAGGAGCTGGCGGTGGTGGTGGCGGTGGCCGTGTAGCAACAAGGCTTGTCGTGTCAAGAATGCACGTCGGTTGTTTGCTAGGGAAGGGAGGAAAGATAATCGAGCAAATGAGGATGGAAACCAAGACCCAGATAAGGATTCTACCTAGAGATCACAATTTGCCTCGTTGCATTTCAATGTCGGAGGAGATTGTTCAGATTGTTGGTGATGCAAATGCTGTGAAGAATGCTATAGCTATCGTTTCATCACGCTTGAGAGAGAGTCAGCATCGTGATCGTAGTCATTTACATGGACGTCTGCATTCACCGGAACGTGGTTTCCCTCCTGATGATGATTATGTTCCAAATATAAGCAATACAGGGCGACGGTTATCAATGGATGGACGAACATTTAGATCACGTGCTTCTAATGCAAGAGGCAATGACTATTCCAACCGTCAATCTAGTTTTTCAATAGAGCCTGGGGCCCCTCCTGTTAGTGACAATGTGATGCCCTTTTACGGGGAGGACCTTGTATTTAGAATATTATGCCCAATTGACAAAGTTGATAGTGTTATTGGAGAGTCTGAAGGAATTATAGAATTACTACGGAATGAAGTTGGTGTGGATATCAAGGTTTCCGACCCTGTAACTGGTTCAAACGAACGGATTCTTACCATTTCCTCGGAGGAGGGTCCAGACGATGAGCTCTTTCCAGCACAGGAAGCTTTGTTACACATCCAAACTCACATTGTTGATCTCATTCCTGATAAGGATAACGTTGTAACTACTAGGTTGCTTGTCCCATCAAGTGATATTGTATGTTTGGAGGGAAGAGATGGATCATTGTTAGAGATGAAGAGATTAACTGGTGCAAATATACAAATTGTGCCAAGAGAAGAACTTCCTGTGTTTGTATCAGGGGCTGATGAACTCATACAGATCGTAGGGGACATAAAAGCAGCTAGAGATGCACTTGTTGAGTTAACATCAAGATTACGGAGTTACCTTTATAAGGAGCCCTTCCAAAAAGATACAAGTCCTCCAGTCAGTTTAGGACTTGAGGAATCATCTTCAAATAATAATGTTGCAGCTCGTGAAGTTCATAGCGGAATTGATCCTTCTAGCACAGCCTATCAAAATGTGCAACCTTTTGGAACAGCACAACTGCTAAAGGAAACTGGAGGATCGAGCAATGAAACTAGTAAGCAGAATGAAAATGACCGACGGGAAGATCTGCCTAGTGGGTTAAATAGGATACCTGTGCCGCTTGTTACTCGTAGTACACTTGAAGTTGTGATACCAGAGCCTGCCGTTCCGAAGCTTATAACAAAATCAAAAAACAAGCTTGCCCAGATCAGTGAGTTGTCTGGAGCCAATGTTACGCTGGTAGAAGACAGACCAGATGTAACACAGAAGATAATTCAAATATCAGGTACACCAGAGCAGGCTGAGAGAGCCCAGAGCTTGTTGCAAGGCTTTATTTTGAGCATGCAAGAAGACGGCCCCTAAGTTTTGGCCCTTTGGTTTTAGTTTACCCCAAAATTAAGCTGCCCATAAAAGGATTGCCCCATCAGTCATCAGGTGTACGTGTATATCGCGGGGCTGTTGCTTCTAGACTCGGAATTGTGTCTCTTTTCAGCTGTGTTTCTGGAAGAGCTATGGGGGAAGAAAGAGCAAATTAACCATTGCCATGTAAATTTGGAATGTACAAGCGTTTCCATTCTTCAAAATCTCTCCTTTTTTCTTCTTTTTGTTGTTTCAGTAGGAAAGCAATTTCGGTATTATTCATCTCCGTAGTTATTGGAATCCGATTTTAAGCATGTCTTAGTTTTTGGGGTCCCCCCAATGGATACCATAATTATATGTACCTTAGTTTATTACCATAAAGAAAAAGGTTTTGATCTATGTCCATTTAATTTTGAAATTTTAAATTCTTTTTATGTATCTTTTTGTCATTGATAACGTTAATTGATTTTGATATTACTGGATAAACAAATTACAGCTAGTTTAGAACATGCTAAAACACTAGCTAGGTTGTATATATTTATTTATACAAAAAAAAAATCTAGTAATTGAACGAGAAATAAATTCTTTTGCAAGGAGGATGTTTGATTTAATTTTATGAAAAACATGCTCTCAATAATACAGTTTCTAAATTGTCAGAAAAAGTAAAAAATGAAATTAGGGTTAAGACATACTTAATAATTTGAGAGGACATTTTTCTTTAACTTATTGGGGAGGAAGGTCATTTATCCAAAAATAGTACGTTCGGGACAGTCTCGTCCGTAACAAATGTAGATATCATCCGAAACTGAAAGTGAAGATAGCACAGCGATGCGATGAGTACTCCAATCCCAACACTATCCTTTGTTTCTTCACCTGTAACTAGGATAGAGGCGAGGGCGGGAATTTCTCATACCTTTAACTTTCCTCCGCGGTCGAAGGTGGTCGCCAGAAAGCAAAGAATTGATGAAGGTGGTGGTCGGCGAGTGTGGCGCCGAAGAAAATTGATGAAGAAGGATGATATGTCGCACTACAAGATGGATCGAATCCCATTCCTTGAAGAACAGGTGAGAAAGGTAAAGGAACAGGGGAAGCTTGTTACAATGGACATCGAAAGACTACTATTATCAGAGGATAACCGCTTCGACTTTGTGAATGAGGTTGCCGCTGAGGCTAAGGAATATGTAGAGAGCAACCGTGACGAATATGGGGGTTCCAAGAAAGCTATTCTTCATGTTCTCAGCAACCGAGTGAATGATGCTGGGTTTTATCGGCCAGATGCGTATGCAGAAGAAGACCCGTTCAAACCCGGACCTCATTATCTGAAAGAAGAATTTAATTGAAATTCACGAAATACATTTTCTTATACAAAGACTGTCAATGTATTAATCTACAATGTTTTCCCAGTTTTTTAATGTTCGCTTAAGGTGTTTCACTTCTGATTGAGAATCCTGCTTCAGTACCTCAAAAAAGTTCTTAAATTCATGTTCAGGCGATGTAAAAAGAGATGAATTAATTTCATTATTTTGGATAACTGGAATGTTTCAATCCATAGTAAGACATATTTAAGCTCTCTTAAATTTAGCCTCAAATTCCATTCCTTCGCGTATTTAAACTCCTCTCAAACCTCAACTTATTTCTCAAGAAAAAACAAGGGTCAAACTAACTGCCAAAATGCAAGCTAAAGCAGAGAAAGTCACAGTCAAGTTTAGAACTTTGGATGTGAGCCACACAGCTTTTACACTCGGACCCCACTTGGTGATGGTGAACCTGCATCTTCTCGTCTGTCCTAGGTTGGTTCATCTCTTCCCTTAGCTGTGGGCAAGATTCAAAATGCCTTAAAATATTGTATCTGATCCGTTAACCCAATTAGAGGCCTTCCTTCATTCTCTTATCTTTCCCTCTTAATTTAATCTCTATCTCCGAGTTTCTCCAAAAGTAATTGATTTGAATCACACCCAACTGGGTTGGTTTCCCGATTCGGCAAATGGCTTTGCTGAGTCCTCGGTTGCACAGATTCCGCCTAACCAAGCTCCACCATGCCTCCGCCTCCAAACCCACCAAGACAAACGACCTCACTGTCTCAAGAAAAAGCCGATGCTGCTCCGCCATAGCTATTGATGCTCCTTCTTCTTTAACGGATGCTGCGGGAATCAGATGGGGTTCCACTACTCTGCAAGGCTTGCGCGAAGAAATGGAGGACGATGCTGTTGTGCGATCTGATGGTCTTAATGGCTTCTCGTTTGCTGCAGTTTTCGACGGCCATGGCGGCTATTCCTCCGTCAAGTTCCTCAGGGAGGAGCTGTATAAAGACTGTGTAGCAGCTTTACAAGGTGGCCTGCTGTTGAATGGAGGGGATTTTGAAGTGATAAAAGCGGCTTTGGAGAAGGCTTTTGATGATACTGATAAAAGATTACTGCTTTTGCTTGAGGCAGCTGGGGAGGAAGATGAATCTGGTTCCACTGCAACTGTTGCATTCATACGAAACGATGTGCTGTTCATTTCACATGTTGGCGATTCATGCGTGGTTTTGTCACGTTCCGGAGGAGCACAGGTGTTGACTACTTCTCATCGGCCTTACGGAAACAACAGCACTTCACTGCAAGAAATTAGAAGAATTAGAGAAGCAGGTGGATGGATTTCTAACGGAAGAATCTGTGGGGACATCTCTGTATCTCGTGCATTTGGTGACATACGATTCAAGTCAAAGAAAAACGATATGCTACAGAAGGGAGTTCAAGAAGGCAGATGGTCTGAAAAATTTGTTTCTCGTGTACAGTTCAATGGAGACTTGGTTACTTCATTACCAGAAATTTTTCAAGTTACTCTCGGATCAAATGTCGAGTTTATACTGATAGCGTCGGACGGTCTATTGGATTACATGAACAGTTCCGATGCAGTTAAGTTTGTTCGGAATCACCTCAGACAGAACGGCGATGTTCAGCTAGCTTGTGAAGCCCTCGCTCAAGCAGCCTTGGAAAATGGGTCACAAGACAATATCAGCATTATCATGGCTGATTTAGGGCGGACAGATTGGAAGAATTTGCCCCTTAAGCAAGACAATGTCATATTCGAACTGGCTCAAGCTTTCGCAACGATCGGGGTAGTTTCTTTCGGTATTTGGTGGGCATCCTCTATTTTCACTCTTTAAAGTTGTTGTCTCTCACTATTGTATAACCAGGTTCATCTTCCATACTTGTCATCTGTAAAGTGTAATTGAATAGTTATACAATGTATCACATCTTACCACTGCTAGTTTAGACAACTTAACATGCCCTCACAAGAGTTGCAGAATTCTTCTTTCCCATGTGGTTTGGGTCGATTGAACTGTCATTCTTCAGGAAATGTAATGCCTTAACTATCATGCCTGTAAAACTACACACAAACTTTTTGGTTCACATTCTACACCTTCCATCAAGATTCACAACTTTTCAATTTGAAGGTCTTATTTTGTCCATGAGGAACCTTACCAGGAGAGTTTACATCTTTCATCAGAAGTTTACACATGTTTTCAAGACAATCCAACATTCTGATTGGTTGGTTGGATTGTTTAGAGCAGCACTGTGTTGACTACGACATTCTGATCATCAGTGGTTATTTTGATTTTGATCATCAGTGGTTATTTTGATTTTCCAAACAAAATTGAGAGATCAGATAGCCATTCTCATGGTAACAGGGAAACGGAACGACACGCCAGTATCTGGTTTGAATCTTTAAACACAGCTAGTCTACTGCCTAAATATTAGTTGCCATTTTCATTTCAAACAGTCCCCATCAAGATTGGCCTTCATAATAAATGCAATTTCAGAAATTGTGCCATGCTATTTTCTTTCTGTTTCTTTTCTTTCTGCATATGGTTATCATATATTGTTTGAAATTAAGACCATAGAGTTATTTTGAGGTTACATATCTATTGCTGAAGATGACGTTTGATTCCTTTCTCATATGCTAGGACGGATGATATTTGCATTTTTTTTTTCTCTGATATTAACAAACATTCAAACCCTAGAACCAAACCGACTATTTATATTCTTACCACAAACAGAGTTGCACCATGAAACTCGCTTGCATTCCTACTACCTCAACACTAACAGACCCATTTCTTTATCATTATTTGGTTCAAGGAAACACAGGAATCACGAGTCCTACCTATGGCTTCCCGGTGCCAGGTTTCGGAGGCTCGTGCTTACGGTTAGGGCAGTTGTTGAAGAGAAAAGTAAATAGCTTTCAAACACGAAAAAGTAAATATTCAACAATTTCTCCACAGATCTGCTATGCTTTACAGTACCTTGTGAGGAGAGTGATGAAGACTCATCTGAGTGTTGAAATCCCCAAACTCTTCTGCAACTGTAATGGAAAGATGGAAAGAGAGGAGGTTGGTTATATTTGTGTAAGCTATGGGGTATTGAACAAAAATTTTCTCACCTGAAGAGAAGG

Coding sequence (CDS)

ATGGAGAAGTCTAGATCTAAGAGAAACTACTACTATGACCACCAAGACTATGATTCGGAGGCGATGGGTAGAACCAGACCTCGTTACAACAATCACTACGCCAATAATAACTATCGTCACCGTGGAAGTGCAGCCCGGCCGTCTAAACCTCAAGACCAATCTCTTATGGTGACCACGACTTACAGGATTCTCTGTCACGACGCCAAGGCCGGGGGAGTTATCGGCAAATCCGGTAGCATCATTAAGTCCATTAGGCAGCACACCGGCGCGTGGATCAACGTGCATGAGCTAGCTCCGGGCGATGAGGAGAGAATAATTGAAATATCGGACACCCGGCGGCGGGACCCGGAAGGCCGGATTCCGCCGTTCTCTCCGGCGCAAGAAGCACTTTTCTTGATTCATGATAGGATTCTTGAGAGTGACATGAGTCCTGGGTTTAACGGAATGGGGTATGGTGCTGAGGACGAGGATGATGATTACGGTGGGGTTAGGGGAGGAGCTGGCGGTGGTGGTGGCGGTGGCCGTGTAGCAACAAGGCTTGTCGTGTCAAGAATGCACGTCGGTTGTTTGCTAGGGAAGGGAGGAAAGATAATCGAGCAAATGAGGATGGAAACCAAGACCCAGATAAGGATTCTACCTAGAGATCACAATTTGCCTCGTTGCATTTCAATGTCGGAGGAGATTGTTCAGATTGTTGGTGATGCAAATGCTGTGAAGAATGCTATAGCTATCGTTTCATCACGCTTGAGAGAGAGTCAGCATCGTGATCGTAGTCATTTACATGGACGTCTGCATTCACCGGAACGTGGTTTCCCTCCTGATGATGATTATGTTCCAAATATAAGCAATACAGGGCGACGGTTATCAATGGATGGACGAACATTTAGATCACGTGCTTCTAATGCAAGAGGCAATGACTATTCCAACCGTCAATCTAGTTTTTCAATAGAGCCTGGGGCCCCTCCTGTTAGTGACAATGTGATGCCCTTTTACGGGGAGGACCTTGTATTTAGAATATTATGCCCAATTGACAAAGTTGATAGTGTTATTGGAGAGTCTGAAGGAATTATAGAATTACTACGGAATGAAGTTGGTGTGGATATCAAGGTTTCCGACCCTGTAACTGGTTCAAACGAACGGATTCTTACCATTTCCTCGGAGGAGGGTCCAGACGATGAGCTCTTTCCAGCACAGGAAGCTTTGTTACACATCCAAACTCACATTGTTGATCTCATTCCTGATAAGGATAACGTTGTAACTACTAGGTTGCTTGTCCCATCAAGTGATATTGTATGTTTGGAGGGAAGAGATGGATCATTGTTAGAGATGAAGAGATTAACTGGTGCAAATATACAAATTGTGCCAAGAGAAGAACTTCCTGTGTTTGTATCAGGGGCTGATGAACTCATACAGATCGTAGGGGACATAAAAGCAGCTAGAGATGCACTTGTTGAGTTAACATCAAGATTACGGAGTTACCTTTATAAGGAGCCCTTCCAAAAAGATACAAGTCCTCCAGTCAGTTTAGGACTTGAGGAATCATCTTCAAATAATAATGTTGCAGCTCGTGAAGTTCATAGCGGAATTGATCCTTCTAGCACAGCCTATCAAAATGTGCAACCTTTTGGAACAGCACAACTGCTAAAGGAAACTGGAGGATCGAGCAATGAAACTAGTAAGCAGAATGAAAATGACCGACGGGAAGATCTGCCTAGTGGGTTAAATAGGATACCTGTGCCGCTTGTTACTCGTAGTACACTTGAAGTTGTGATACCAGAGCCTGCCGTTCCGAAGCTTATAACAAAATCAAAAAACAAGCTTGCCCAGATCAGTGAGTTGTCTGGAGCCAATGTTACGCTGGTAGAAGACAGACCAGATGTAACACAGAAGATAATTCAAATATCAGGTACACCAGAGCAGGCTGAGAGAGCCCAGAGCTTGTTGCAAGGCTTTATTTTGAGCATGCAAGAAGACGGCCCCTAA

Protein sequence

MEKSRSKRNYYYDHQDYDSEAMGRTRPRYNNHYANNNYRHRGSAARPSKPQDQSLMVTTTYRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELAPGDEERIIEISDTRRRDPEGRIPPFSPAQEALFLIHDRILESDMSPGFNGMGYGAEDEDDDYGGVRGGAGGGGGGGRVATRLVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGDANAVKNAIAIVSSRLRESQHRDRSHLHGRLHSPERGFPPDDDYVPNISNTGRRLSMDGRTFRSRASNARGNDYSNRQSSFSIEPGAPPVSDNVMPFYGEDLVFRILCPIDKVDSVIGESEGIIELLRNEVGVDIKVSDPVTGSNERILTISSEEGPDDELFPAQEALLHIQTHIVDLIPDKDNVVTTRLLVPSSDIVCLEGRDGSLLEMKRLTGANIQIVPREELPVFVSGADELIQIVGDIKAARDALVELTSRLRSYLYKEPFQKDTSPPVSLGLEESSSNNNVAAREVHSGIDPSSTAYQNVQPFGTAQLLKETGGSSNETSKQNENDRREDLPSGLNRIPVPLVTRSTLEVVIPEPAVPKLITKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQAERAQSLLQGFILSMQEDGP

Homology

[Close]

BLAST of MC10g0043 vs. ExPASy Swiss-Prot
Match: Q8W4B1 (RNA-binding KH domain-containing protein RCF3 OS=Arabidopsis thaliana OX=3702 GN=RCF3 PE=1 SV=1)

HSP 1 Score: 766.9 bits (1979), Expect = 1.8e-220
Identity = 429/683 (62.81%), Postives = 516/683 (75.55%), Query Frame = 0


Query: 1   MEKSRSKRNYYYDHQDYDSEAMGRTRPRYNNHY-------ANNNYRHRGSA----ARPSK 60
           ME+SRSKRNY+YD QDYD ++M R++PRYNN+Y        NN YR  G       RPSK
Sbjct: 1   MERSRSKRNYHYD-QDYDGDSMPRSKPRYNNNYHFGGGGGGNNRYRGGGGGGGGNGRPSK 60

Query: 61  PQDQSLMVTTTYRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELAPGDEERIIEIS 120
              ++ M TTTYRILCHDAKAGGVIGKSG+IIKSIRQHTGAWINVHEL PGD ERIIEIS
Sbjct: 61  SHPET-MATTTYRILCHDAKAGGVIGKSGTIIKSIRQHTGAWINVHELVPGDAERIIEIS 120

Query: 121 DTRRRDPEGRIPPFSPAQEALFLIHDRILESDMSPGFNGMGYGAEDEDDDYGGVRGGAGG 180
           D RRRDP+GR+P FSPAQEALF +HDRILES+   G+ G      +E++DYGGVR     
Sbjct: 121 DNRRRDPDGRMPSFSPAQEALFSVHDRILESEAQFGYGG---PPPEEEEDYGGVR----- 180

Query: 181 GGGGGRVATRLVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIV 240
             GGGRV TRLVVSRMHVGCLLGKGGKIIEQMR+ETKT IRILPR+ NLPRC+S+SEEIV
Sbjct: 181 -PGGGRVVTRLVVSRMHVGCLLGKGGKIIEQMRIETKTHIRILPRESNLPRCVSLSEEIV 240

Query: 241 QIVGDANAVKNAIAIVSSRLRESQHRDRSHLHGRLHSPERGF-PPDDDYVPNISNTGRRL 300
           QIVG+ NAVKNA+AIVSSRLRESQHRDRS+  GR HSPER F    DDY+P +    RR 
Sbjct: 241 QIVGELNAVKNALAIVSSRLRESQHRDRSNFQGRSHSPERSFAAAGDDYMPQL----RRQ 300

Query: 301 SMDGRTFRSRASNARGNDYSNRQSSFSIEPGAPPVSDNVMPFYGEDLVFRILCPIDKVDS 360
           S D    R    N R N++S+RQS+++ E  A PV +NV   Y E+LVF+ILCP DK+  
Sbjct: 301 SSD----RFPRGNFRNNNFSSRQSNYAEEAPAVPVGENV---YSEELVFQILCPADKIVR 360

Query: 361 VIGESEGIIELLRNEVGVDIKVSDPVTGSNERILTISSEEGPDDELFPAQEALLHIQTHI 420
           V+GES+GII+LL+NE+GVD++VSDPV GS+E+I+TISSEE PDD  FPAQEALLHIQT I
Sbjct: 361 VVGESQGIIDLLQNEIGVDVRVSDPVAGSDEQIITISSEEAPDDPFFPAQEALLHIQTQI 420

Query: 421 VDLIPDKDNVVTTRLLVPSSDIVCLEGRDGSLLEMKRLTGANIQIVPREELPVFVSGADE 480
           +DLIPDKDN++TTRLLVPS D +CLEG+ GS+ E+ RLTG ++QI+ REE+P   S  D 
Sbjct: 421 IDLIPDKDNLITTRLLVPSRDSICLEGKAGSVSEISRLTGTSVQILAREEIPRCASINDV 480

Query: 481 LIQIVGDIKAARDALVELTSRLRSYLYKEPFQKDTSPPVSLG-----------LEESSSN 540
           +IQI G+I+AAR+ALVELT  LRS+++KE  QK+T PP S             +E +SSN
Sbjct: 481 VIQITGEIRAAREALVELTLLLRSHMFKELSQKET-PPASTSTTGPLEGVAGVMEVASSN 540

Query: 541 NNVAAREVHSGIDPSSTAYQNVQPFGTAQLLKETGGSSNETSKQNENDRREDLPSGLNRI 600
           N + +RE      P+S+     Q        KE  GS    +K  E++ RE++P   +R+
Sbjct: 541 NTIQSRE-----GPTSSNLNLQQVSTILPQFKEGFGS---VAKAGESEHREEVPVTTSRM 600

Query: 601 PVPLVTRSTLEVVIPEPAVPKLITKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGT 660
            VPLVTRSTLEVV+PE  VPKL+TKS+NKLAQISE SGA+VT+VEDRP+ TQ II+ISGT
Sbjct: 601 AVPLVTRSTLEVVLPEAVVPKLVTKSRNKLAQISEWSGASVTIVEDRPEETQNIIRISGT 652

[Close]

BLAST of MC10g0043 vs. ExPASy Swiss-Prot
Match: P58223 (KH domain-containing protein At4g18375 OS=Arabidopsis thaliana OX=3702 GN=At4g18375 PE=2 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 2.9e-40
Identity = 179/662 (27.04%), Postives = 299/662 (45.17%), Query Frame = 0


Query: 20  EAMGRTRPRYNNHYANNNYRHRGSAARPSKPQDQSLMVTTTYRILCHDAKAGGVIGKSGS 79
           E   R + + NN  +N N + R S  + ++ +         YRILC     GGVIGKSG 
Sbjct: 3   ERKKRKQIQRNNSESNRNQKRRISHDKINRDE------LVVYRILCPIDVVGGVIGKSGK 62

Query: 80  IIKSIRQHTGAWINVHELAPGDEERIIEISDTRRRDPE------GRIPPFSPAQEALFLI 139
           +I +IR +T A I V +   G  +R+I I  + +   E          P   AQ+AL  +
Sbjct: 63  VINAIRHNTKAKIKVFDQLHGCSQRVITIYCSVKEKQEEIGFTKSENEPLCCAQDALLKV 122

Query: 140 HDRILESDMSPGFNGMGYGAEDEDDDYGGVRGGAGGGGGGGRVATRLVVSRMHVGCLLGK 199
           +D I+ SD     N      + +D+                    RL+V       L+GK
Sbjct: 123 YDAIVASDEE---NNTKTNVDRDDNK-----------------ECRLLVPFSQSSSLIGK 182

Query: 200 GGKIIEQMRMETKTQIRILPRDHNLPR--CISMSEEIVQIVGDANAVKNAIAIVSSRLRE 259
            G+ I+++R  T+  ++++ +D + P   C    + +V I G+  +VK A+  VS+ + +
Sbjct: 183 AGENIKRIRRRTRASVKVVSKDVSDPSHVCAMEYDNVVVISGEPESVKQALFAVSAIMYK 242

Query: 260 SQHRDRSHLHGRLHSPERGFPPDDDYVP-NISN-----TGRRLSMDGRTFRSRASNARGN 319
              R+       L S  +  P     VP ++SN     TG   + D    +     +  N
Sbjct: 243 INPRENI----PLDSTSQDVPAASVIVPSDLSNSVYPQTGFYSNQDHILQQGAGVPSYFN 302

Query: 320 DYSNRQSSFSIEPGAPPV-----SDNVMPFYG-----EDLVFRILCPIDKVDSVIGESEG 379
             S        E  A PV     S  V   +G     E+LVF++LCP+  +  VIG+   
Sbjct: 303 ALSVSDFQGYAETAANPVPVFASSLPVTHGFGGSSRSEELVFKVLCPLCNIMRVIGKGGS 362

Query: 380 IIELLRNEVGVDIKVSDPVT--GSNERILTISSEEGPDDELFPAQEALLHIQTHIVDLIP 439
            I+ +R   G  I+V+D  T  G +E ++ +++ E PDD    A EA+L +Q +I D   
Sbjct: 363 TIKRIREASGSCIEVNDSRTKCGDDECVIIVTATESPDDMKSMAVEAVLLLQEYIND--E 422

Query: 440 DKDNVVTTRLLVPSSDIVCLEGRDGSLL-EMKRLTGANIQIVPREELPVFVSGADELIQI 499
           D +N V  +LLV S  I C+ G+ GS++ E+++ T ANI I   ++        D+L+++
Sbjct: 423 DAEN-VKMQLLVSSKVIGCVIGKSGSVINEIRKRTNANICISKGKK--------DDLVEV 482

Query: 500 VGDIKAARDALVELTSRLRSYLYKEPFQKDTSPPVSLGLEESSSNNNVAAREVHSGIDPS 559
            G++ + RDAL+++  RLR  +              LG ++S +     AR  +      
Sbjct: 483 SGEVSSVRDALIQIVLRLREDV--------------LGDKDSVATRKPPARTDNCSFLSG 542

Query: 560 STAYQNVQPFGTAQLLKETGGSSNETSKQNENDRREDLPSGLNRIPVPLVTRSTLEVVIP 619
           S+      P   + +   +G     +    +N      P    R+P    + S LE++IP
Sbjct: 543 SSNAGYTLPSFMSSMASTSGFHGYGSFPAGDNVLGSTGPYSYGRLP----SSSALEILIP 602

Query: 620 EPAVPKLITKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQAERAQSLLQGFI 655
             A+ K++ K    L  I  +SGA + +   +      I  +SGT EQ   A++L+Q F+
Sbjct: 603 AHAMSKVMGKGGGNLENIRRISGAMIEISASKTSHGDHIALLSGTLEQMRCAENLVQAFV 605

[Close]

BLAST of MC10g0043 vs. ExPASy Swiss-Prot
Match: F4KDN0 (KH domain-containing protein HEN4 OS=Arabidopsis thaliana OX=3702 GN=HEN4 PE=1 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 1.3e-37
Identity = 192/823 (23.33%), Postives = 319/823 (38.76%), Query Frame = 0


Query: 61  YRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELAPGDEERIIEISDTRRRDPEGRI 120
           +R+LC  +  G VIGKSG++IK ++Q TGA I V E   G  +R+I I    + D + R+
Sbjct: 49  FRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITI--IAQADSKSRV 108

Query: 121 PPFSPAQEALFLIHDRILESDMSPGFNGMGYGAEDEDDDYGGVRGGA--------GGGGG 180
                                +    NG   G + E++       GA             
Sbjct: 109 --------------------KLGANNNGNAEGEKKEEEVEVSKAQGALIKVFELLAAEAD 168

Query: 181 GGRVATRLVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIV 240
              V  RL+    H G ++GKGG+++  +R ET  +I I  R  NLP C    +E+V++ 
Sbjct: 169 SDTVVCRLLTESSHAGAVIGKGGQMVGSIRKETGCKISI--RIENLPICADTDDEMVEVE 228

Query: 241 GDANAVKNAIAIVSS--------------------------------------------- 300
           G+A AVK A+  +S                                              
Sbjct: 229 GNAIAVKKALVSISRCLQNCQSIDKVRMVGNRPLEKEFQASLHRPIETIIQESLPRSVEV 288

Query: 301 -----RLRES-------------------------------------------------- 360
                RLR                                                    
Sbjct: 289 NPYDYRLRNDEIFPRGTVARANDVIPHDTLHLRRIEAVPQGALRMHIEADRQDVLRRHVE 348

Query: 361 --------------------------------QHRDRSHLHGRLHSPERGFPPDDDYVPN 420
                                           QHR+R   H  LH P    P D   +P 
Sbjct: 349 ADRQDALRRRIDVVPQETLYMPSDVLRGDCFRQHRERDDSHDSLHRPFEMVPRDAMGMPF 408

Query: 421 IS----NTGRRL-SMDGRTFRSRASNARGNDYSNRQS---SFSIEPG-------APPVSD 480
            S      GR + +M   T R ++++   + YS   +   SF+            PP S+
Sbjct: 409 ESFPRDAYGRPIETMTQETLRGQSADYLAHRYSTLDTHPHSFTTSASMANTATMKPPPSE 468

Query: 481 NVMPFYGEDLVFRILCPIDKVDSVIGESEGIIELLRNEVGVDIKVSDPVTGSNERILTIS 540
             +    +D+VF+ILC  +    VIG    ++ +L +E G  I V + +    ER++ ++
Sbjct: 469 --VEVGNQDVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNTLDDCEERLIAVT 528

Query: 541 SEEGPDDELFPAQEALLHIQTHIVDLIPDK--DN----VVTTRLLVPSSDIVCLEGRDGS 600
           + E P+ +  PAQ+A++ I + + +L  +K  DN     +T RL+VP+S I C+ G+ G 
Sbjct: 529 ASENPECQSSPAQKAIMLIFSRLFELATNKILDNGPRSSITARLVVPTSQIGCVLGKGGV 588

Query: 601 LL-EMKRLTGANIQIVPREELPVFVSGADELIQIVGDIKAARDALVELTSRLRSYLYKEP 655
           ++ EM++ TGA IQI+  E+ P  +S  D+++QI G+    R+A+  +TSRLR  ++   
Sbjct: 589 IVSEMRKTTGAAIQILKVEQNPKCISENDQVVQITGEFPNVREAIFHITSRLRDSVFSNS 648

[Close]

BLAST of MC10g0043 vs. ExPASy Swiss-Prot
Match: Q9SR13 (Flowering locus K homology domain OS=Arabidopsis thaliana OX=3702 GN=FLK PE=1 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 3.7e-19
Identity = 88/356 (24.72%), Postives = 154/356 (43.26%), Query Frame = 0


Query: 329 PFYGEDLVFRILCPIDKVDSVIGESEGIIELLRNEVGVDIKVSDPVTGSNERILTISSEE 388
           P +  + VFR+L P  KV S+IG    +I+ +  E    IK+ D   G+ ER + +S +E
Sbjct: 181 PGWPGETVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAVMVSGKE 240

Query: 389 GPDDELFPAQEALLHIQTHIVDLIPDK------DNVVTTRLLVPSSDIVCLEGRDGSLLE 448
            P+  L P+ + LL +   IVD +  +       + V+TRLLVP+S    L G+ G  ++
Sbjct: 241 EPESSLPPSMDGLLRVHMRIVDGLDGEASQAPPPSKVSTRLLVPASQAGSLIGKQGGTVK 300

Query: 449 -MKRLTGANIQIVPREELPVFVSGADELIQIVGDIKAARDALVELTSRLRSYLYKE---P 508
            ++  +   ++++  E+LPVF    D ++++VG+  +   AL  + S LR +L      P
Sbjct: 301 AIQEASACIVRVLGSEDLPVFALQDDRVVEVVGEPTSVHRALELIASHLRKFLVDRSIIP 360

Query: 509 F----------QKDTSPPVSLGLEESSSNNNVAAREVHSGIDPSSTAYQNVQP----FGT 568
           F          Q D  PP     +        A      G   +   Y    P    +  
Sbjct: 361 FFENQMQKPTRQMDHMPPPH---QSWGPPQGHAPSVGGGGYGHNPPPYMQPPPRHDSYYP 420

Query: 569 AQLLKETGGSSNETSKQNENDRREDLPSGLNRIPVPLVTRSTLEVVIPEPAVPKLITKSK 628
              +++           +   R   +   ++  P  +  + T ++ IP      +I  S 
Sbjct: 421 PPEMRQPPMEKQPHQGISAYGREPPMNVHVSSAPPMVAQQVTQQMQIPLSYADAVIGTSG 480

Query: 629 NKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQAERAQSLLQGFILSMQEDGP 661
           + ++    LSGA VT+ E R    +  +++SGT  Q + A  L+Q F+       P
Sbjct: 481 SNISYTRRLSGATVTIQETRGVPGEMTVEVSGTGSQVQTAVQLIQNFMAEAGAPAP 533

[Close]

BLAST of MC10g0043 vs. ExPASy Swiss-Prot
Match: Q5E9A3 (Poly(rC)-binding protein 1 OS=Bos taurus OX=9913 GN=PCBP1 PE=2 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 1.3e-08
Identity = 86/365 (23.56%), Postives = 146/365 (40.00%), Query Frame = 0


Query: 52  DQSLMVTTTYRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELAPGDEERIIEISDT 111
           +  L VT T R+L H  + G +IGK G  +K IR+ +GA IN+ E      ERII ++  
Sbjct: 7   ESGLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIITLTG- 66

Query: 112 RRRDPEGRIPPFSPAQEALFLIHDRILESDMSPGFNGMGYGAEDEDDDYGGVRGGAGGGG 171
                     P +   +A  +I D+ LE D++         +                  
Sbjct: 67  ----------PTNAIFKAFAMIIDK-LEEDINSSMTNSTAASRPP--------------- 126

Query: 172 GGGRVATRLVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQI 231
               V  RLVV     G L+GKGG  I+++R  T  Q+++      LP   + +E  + I
Sbjct: 127 ----VTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLP---NSTERAITI 186

Query: 232 VGDANAVKNAIAIVSSRLRESQHRDRSHLHGRLHS-PERGFPPDDDYV------------ 291
            G   +V   +  +   + E+  +      GR+ + P +  P     +            
Sbjct: 187 AGVPQSVTECVKQICLVMLETLSQSP---QGRVMTIPYQPMPASSPVICAGGQDRCSDAA 246

Query: 292 --PNISN--TGRRL---SMDGRTFRSRASNARGNDYSNRQSSFSIE------PGAPPVSD 351
             P+ ++   G  L   S+ G+   S    A+ N  + +QS F++        G    S 
Sbjct: 247 GYPHATHDLEGPPLDAYSIQGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSP 306

Query: 352 NVMPFYGE-----DLVFRILCPIDKVDSVIGESEGIIELLRNEVGVDIKVSDPVTGSNER 386
            V  ++            +  P + +  +IG     I  +R   G  IK+++PV GS+ R
Sbjct: 307 EVKGYWASLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGR 330

[Close]

BLAST of MC10g0043 vs. NCBI nr
Match: XP_022141016.1 (RNA-binding KH domain-containing protein RCF3 [Momordica charantia])

HSP 1 Score: 1288 bits (3332), Expect = 0.0
Identity = 660/660 (100.00%), Postives = 660/660 (100.00%), Query Frame = 0


Query: 1   MEKSRSKRNYYYDHQDYDSEAMGRTRPRYNNHYANNNYRHRGSAARPSKPQDQSLMVTTT 60
           MEKSRSKRNYYYDHQDYDSEAMGRTRPRYNNHYANNNYRHRGSAARPSKPQDQSLMVTTT
Sbjct: 1   MEKSRSKRNYYYDHQDYDSEAMGRTRPRYNNHYANNNYRHRGSAARPSKPQDQSLMVTTT 60

Query: 61  YRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELAPGDEERIIEISDTRRRDPEGRI 120
           YRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELAPGDEERIIEISDTRRRDPEGRI
Sbjct: 61  YRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELAPGDEERIIEISDTRRRDPEGRI 120

Query: 121 PPFSPAQEALFLIHDRILESDMSPGFNGMGYGAEDEDDDYGGVRGGAGGGGGGGRVATRL 180
           PPFSPAQEALFLIHDRILESDMSPGFNGMGYGAEDEDDDYGGVRGGAGGGGGGGRVATRL
Sbjct: 121 PPFSPAQEALFLIHDRILESDMSPGFNGMGYGAEDEDDDYGGVRGGAGGGGGGGRVATRL 180

Query: 181 VVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGDANAVKN 240
           VVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGDANAVKN
Sbjct: 181 VVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGDANAVKN 240

Query: 241 AIAIVSSRLRESQHRDRSHLHGRLHSPERGFPPDDDYVPNISNTGRRLSMDGRTFRSRAS 300
           AIAIVSSRLRESQHRDRSHLHGRLHSPERGFPPDDDYVPNISNTGRRLSMDGRTFRSRAS
Sbjct: 241 AIAIVSSRLRESQHRDRSHLHGRLHSPERGFPPDDDYVPNISNTGRRLSMDGRTFRSRAS 300

Query: 301 NARGNDYSNRQSSFSIEPGAPPVSDNVMPFYGEDLVFRILCPIDKVDSVIGESEGIIELL 360
           NARGNDYSNRQSSFSIEPGAPPVSDNVMPFYGEDLVFRILCPIDKVDSVIGESEGIIELL
Sbjct: 301 NARGNDYSNRQSSFSIEPGAPPVSDNVMPFYGEDLVFRILCPIDKVDSVIGESEGIIELL 360

Query: 361 RNEVGVDIKVSDPVTGSNERILTISSEEGPDDELFPAQEALLHIQTHIVDLIPDKDNVVT 420
           RNEVGVDIKVSDPVTGSNERILTISSEEGPDDELFPAQEALLHIQTHIVDLIPDKDNVVT
Sbjct: 361 RNEVGVDIKVSDPVTGSNERILTISSEEGPDDELFPAQEALLHIQTHIVDLIPDKDNVVT 420

Query: 421 TRLLVPSSDIVCLEGRDGSLLEMKRLTGANIQIVPREELPVFVSGADELIQIVGDIKAAR 480
           TRLLVPSSDIVCLEGRDGSLLEMKRLTGANIQIVPREELPVFVSGADELIQIVGDIKAAR
Sbjct: 421 TRLLVPSSDIVCLEGRDGSLLEMKRLTGANIQIVPREELPVFVSGADELIQIVGDIKAAR 480

Query: 481 DALVELTSRLRSYLYKEPFQKDTSPPVSLGLEESSSNNNVAAREVHSGIDPSSTAYQNVQ 540
           DALVELTSRLRSYLYKEPFQKDTSPPVSLGLEESSSNNNVAAREVHSGIDPSSTAYQNVQ
Sbjct: 481 DALVELTSRLRSYLYKEPFQKDTSPPVSLGLEESSSNNNVAAREVHSGIDPSSTAYQNVQ 540

Query: 541 PFGTAQLLKETGGSSNETSKQNENDRREDLPSGLNRIPVPLVTRSTLEVVIPEPAVPKLI 600
           PFGTAQLLKETGGSSNETSKQNENDRREDLPSGLNRIPVPLVTRSTLEVVIPEPAVPKLI
Sbjct: 541 PFGTAQLLKETGGSSNETSKQNENDRREDLPSGLNRIPVPLVTRSTLEVVIPEPAVPKLI 600

Query: 601 TKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQAERAQSLLQGFILSMQEDGP 660
           TKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQAERAQSLLQGFILSMQEDGP
Sbjct: 601 TKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQAERAQSLLQGFILSMQEDGP 660

[Close]

BLAST of MC10g0043 vs. NCBI nr
Match: XP_038891418.1 (RNA-binding KH domain-containing protein RCF3 [Benincasa hispida])

HSP 1 Score: 1159 bits (2998), Expect = 0.0
Identity = 600/667 (89.96%), Postives = 624/667 (93.55%), Query Frame = 0


Query: 1   MEKSRSKRNYYYDHQDYDSEAMGRTRPRYNN-HYANNNYRHRGSAARPSKPQDQSLMVTT 60
           MEKSRSKRNYYYDHQDYDSE+MGRTRPRYNN HY NNNYRHRG+A RPSKPQDQSLMVTT
Sbjct: 1   MEKSRSKRNYYYDHQDYDSESMGRTRPRYNNNHYPNNNYRHRGNAVRPSKPQDQSLMVTT 60

Query: 61  TYRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELAPGDEERIIEISDTRRRDPEGR 120
           TYRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHEL PGDEERIIEISDTRRRDPEGR
Sbjct: 61  TYRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEISDTRRRDPEGR 120

Query: 121 IPPFSPAQEALFLIHDRILESDMSPGFNGMGYGAEDEDDDYGGVRGGAGGGGGGGRVATR 180
           +P FSPAQEALFLIH+RILES+MSPGFNGMGYG EDE+DDYGGVRGGAGGG G  RVATR
Sbjct: 121 MPSFSPAQEALFLIHERILESEMSPGFNGMGYGPEDEEDDYGGVRGGAGGGVG--RVATR 180

Query: 181 LVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGDANAVK 240
           LVVS+MHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGD NAVK
Sbjct: 181 LVVSKMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGDTNAVK 240

Query: 241 NAIAIVSSRLRESQHRDRSHLHGRLHSPERGFPPDDDYVPNISNTGRRLSMDGRTFRSR- 300
            AIAIVSSRLRESQHRDRSH HGRLHSPER FPPDDDYVP+     RRL MDGR FR R 
Sbjct: 241 KAIAIVSSRLRESQHRDRSHFHGRLHSPERIFPPDDDYVPH---NARRLPMDGRPFRPRM 300

Query: 301 -ASNARGNDYSNRQSSFSIEPGAPPVSDNVMPFYGEDLVFRILCPIDKVDSVIGESEGII 360
            ASN RGNDYSNRQS+F +EPGA PV+DN+MPFYGEDLVFRILCPIDKVDSVIGES GII
Sbjct: 301 SASNTRGNDYSNRQSNFLVEPGAVPVNDNMMPFYGEDLVFRILCPIDKVDSVIGESNGII 360

Query: 361 ELLRNEVGVDIKVSDPVTGSNERILTISSEEGPDDELFPAQEALLHIQTHIVDLIPDKDN 420
           ELLRN+VGVDIKVSDPVTGSNERIL ISS+EGPDDELFPAQEALLHIQT IVDL+PDKDN
Sbjct: 361 ELLRNDVGVDIKVSDPVTGSNERILIISSDEGPDDELFPAQEALLHIQTRIVDLVPDKDN 420

Query: 421 VVTTRLLVPSSDIVCLEGRDGSLLEMKRLTGANIQIVPREELPVFVSGADELIQIVGDIK 480
           +VTTRLLVPSSDI CLEGRDGSLLEMKRLTGAN+ IVPRE+LP+FVSGADEL+QI+GDIK
Sbjct: 421 IVTTRLLVPSSDIGCLEGRDGSLLEMKRLTGANVHIVPREDLPMFVSGADELVQIIGDIK 480

Query: 481 AARDALVELTSRLRSYLYKEPFQKDTSPPVS----LGLEESSSNNNVAAREVHSGIDPSS 540
           AARDALVELTSRLR+YLYKEPFQKD SPPVS    LGLEESSSNNN  AREVHSG D SS
Sbjct: 481 AARDALVELTSRLRNYLYKEPFQKDASPPVSVQASLGLEESSSNNNAVAREVHSGNDSSS 540

Query: 541 TAYQNVQPFGTAQLLKETGGSSNETSKQNENDRREDLPSGLNRIPVPLVTRSTLEVVIPE 600
           TAYQNVQPFGTA LLKETGGSSNET  QNENDRREDLPSGLNRIPVPLVTRSTLEVVIPE
Sbjct: 541 TAYQNVQPFGTAHLLKETGGSSNETGTQNENDRREDLPSGLNRIPVPLVTRSTLEVVIPE 600

Query: 601 PAVPKLITKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQAERAQSLLQGFIL 660
           PAVPKLITKSKNKLAQISELSGANVTLVEDRPDV+QKIIQISGTPEQAERAQSLLQGFIL
Sbjct: 601 PAVPKLITKSKNKLAQISELSGANVTLVEDRPDVSQKIIQISGTPEQAERAQSLLQGFIL 660

[Close]

BLAST of MC10g0043 vs. NCBI nr
Match: XP_022923031.1 (RNA-binding KH domain-containing protein RCF3-like [Cucurbita moschata] >KAG7014697.1 RNA-binding KH domain-containing protein RCF3 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1156 bits (2991), Expect = 0.0
Identity = 596/667 (89.36%), Postives = 622/667 (93.25%), Query Frame = 0


Query: 1   MEKSRSKRNYYYDHQDYDSEAMGRTRPRYNNHYANNNYRHRGSAARPSKPQDQSLMVTTT 60
           MEKSRSKRNYYYDHQDYDSEAMGRTRPRYNNHYANNNYRHRGSA RP+KPQDQSLMVTTT
Sbjct: 1   MEKSRSKRNYYYDHQDYDSEAMGRTRPRYNNHYANNNYRHRGSAVRPTKPQDQSLMVTTT 60

Query: 61  YRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELAPGDEERIIEISDTRRRDPEGRI 120
           YRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHEL PGDEERIIEISDTRRRDPEGR+
Sbjct: 61  YRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEISDTRRRDPEGRM 120

Query: 121 PPFSPAQEALFLIHDRILESDMSPGFNGMGYGAEDEDDDYGGVRGGAGGGGGGGRVATRL 180
           P FSPAQEALFLIH+RILES+MSPGFNGMGYG EDE+DDYGGVRGGAGGG    RVATRL
Sbjct: 121 PSFSPAQEALFLIHERILESEMSPGFNGMGYGPEDEEDDYGGVRGGAGGGSS--RVATRL 180

Query: 181 VVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGDANAVKN 240
           VVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVG+ANAVK 
Sbjct: 181 VVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGEANAVKK 240

Query: 241 AIAIVSSRLRESQHRDRSHLHGRLHSPERGFPPDDDYVPNISNTGRRLSMDGRTFRSRAS 300
           A+AIVSSRLRESQHR+RSH HGRLHSPER  PPDDDYVP I+   RRLSMDGR FR R S
Sbjct: 241 AVAIVSSRLRESQHRNRSHFHGRLHSPERILPPDDDYVPPIA---RRLSMDGRPFRPRIS 300

Query: 301 NARGNDYSNRQSSFSIEPGAPPVSDNVMPFYGEDLVFRILCPIDKVDSVIGESEGIIELL 360
           N RGNDYSNRQS+F +EPGA  V+DN+MPFYGEDLVFRILCPIDKVDSVIG+S+GIIELL
Sbjct: 301 NTRGNDYSNRQSNFLVEPGAASVNDNMMPFYGEDLVFRILCPIDKVDSVIGDSDGIIELL 360

Query: 361 RNEVGVDIKVSDPVTGSNERILTISSEEGPDDELFPAQEALLHIQTHIVDLIPDKDNVVT 420
           R+EVGVDIKVSDPVTGSNE+IL ISS+EGPDDELFPAQEALLHIQT IVDL+PDKDN+VT
Sbjct: 361 RDEVGVDIKVSDPVTGSNEQILIISSDEGPDDELFPAQEALLHIQTRIVDLVPDKDNIVT 420

Query: 421 TRLLVPSSDIVCLEGRDGSLLEMKRLTGANIQIVPREELPVFVSGADELIQIVGDIKAAR 480
           TRLLVPSSDI CLEGRDGSLLEMKRLTGAN+ IVPREELP+FVSGADEL+QI+GDIKAAR
Sbjct: 421 TRLLVPSSDIGCLEGRDGSLLEMKRLTGANVHIVPREELPMFVSGADELVQIIGDIKAAR 480

Query: 481 DALVELTSRLRSYLYKEPFQKDTSPPVSL-------GLEESSSNNNVAAREVHSGIDPSS 540
           DA+VELTSRLR+YLYKEPFQKD SPPVSL       GLEESSSNNN AAREVHSG D S 
Sbjct: 481 DAVVELTSRLRNYLYKEPFQKDASPPVSLPSTMGSLGLEESSSNNNAAAREVHSGNDSSI 540

Query: 541 TAYQNVQPFGTAQLLKETGGSSNETSKQNENDRREDLPSGLNRIPVPLVTRSTLEVVIPE 600
           TAYQNVQPFGT QLLKE GGSSNET  QNENDRREDLPSGLNRIPVPLVTRSTLEVVIPE
Sbjct: 541 TAYQNVQPFGTPQLLKENGGSSNETGTQNENDRREDLPSGLNRIPVPLVTRSTLEVVIPE 600

Query: 601 PAVPKLITKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQAERAQSLLQGFIL 660
            AVPKLITKSKNKLAQISELSGANVTLVEDRPD TQKIIQISGTPEQAERAQSLLQGFIL
Sbjct: 601 AAVPKLITKSKNKLAQISELSGANVTLVEDRPDETQKIIQISGTPEQAERAQSLLQGFIL 660

[Close]

BLAST of MC10g0043 vs. NCBI nr
Match: KAG6576646.1 (RNA-binding KH domain-containing protein RCF3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1154 bits (2985), Expect = 0.0
Identity = 595/667 (89.21%), Postives = 621/667 (93.10%), Query Frame = 0


Query: 1   MEKSRSKRNYYYDHQDYDSEAMGRTRPRYNNHYANNNYRHRGSAARPSKPQDQSLMVTTT 60
           MEKSRSKRNYYYDHQDYDSEAMGRTRPRYNNHYANNNYRHRGSA RP+KPQDQSLMVTTT
Sbjct: 1   MEKSRSKRNYYYDHQDYDSEAMGRTRPRYNNHYANNNYRHRGSAVRPTKPQDQSLMVTTT 60

Query: 61  YRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELAPGDEERIIEISDTRRRDPEGRI 120
           YRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHEL PGDEERIIEISDTRRRDPEGR+
Sbjct: 61  YRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEISDTRRRDPEGRM 120

Query: 121 PPFSPAQEALFLIHDRILESDMSPGFNGMGYGAEDEDDDYGGVRGGAGGGGGGGRVATRL 180
           P FSPAQEALFLIH+RILES+MSPGFNGMGYG EDE+DDYGGVRGGAGGG    RVATRL
Sbjct: 121 PSFSPAQEALFLIHERILESEMSPGFNGMGYGPEDEEDDYGGVRGGAGGGSS--RVATRL 180

Query: 181 VVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGDANAVKN 240
           VVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVG+ANAVK 
Sbjct: 181 VVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGEANAVKK 240

Query: 241 AIAIVSSRLRESQHRDRSHLHGRLHSPERGFPPDDDYVPNISNTGRRLSMDGRTFRSRAS 300
           A+AIVSSRLRESQHR+RSH HGRLHSPER  PPDDDYVP I+   RRLSMDGR FR R S
Sbjct: 241 AVAIVSSRLRESQHRNRSHFHGRLHSPERILPPDDDYVPPIA---RRLSMDGRPFRPRIS 300

Query: 301 NARGNDYSNRQSSFSIEPGAPPVSDNVMPFYGEDLVFRILCPIDKVDSVIGESEGIIELL 360
           N RGNDYSNRQS+F +EPGA  V+DN+MPFYGEDLVFRILCPIDKVDSVIG+S+GIIELL
Sbjct: 301 NTRGNDYSNRQSNFLVEPGAASVNDNMMPFYGEDLVFRILCPIDKVDSVIGDSDGIIELL 360

Query: 361 RNEVGVDIKVSDPVTGSNERILTISSEEGPDDELFPAQEALLHIQTHIVDLIPDKDNVVT 420
           R+EVGVDIKVSDPVTGSNE+IL ISS+EGPDDELFPAQEALLHIQT IVDL+PDKDN+V 
Sbjct: 361 RDEVGVDIKVSDPVTGSNEQILIISSDEGPDDELFPAQEALLHIQTRIVDLVPDKDNIVI 420

Query: 421 TRLLVPSSDIVCLEGRDGSLLEMKRLTGANIQIVPREELPVFVSGADELIQIVGDIKAAR 480
           TRLLVPSSDI CLEGRDGSLLEMKRLTGAN+ IVPREELP+FVSGADEL+QI+GDIKAAR
Sbjct: 421 TRLLVPSSDIGCLEGRDGSLLEMKRLTGANVHIVPREELPMFVSGADELVQIIGDIKAAR 480

Query: 481 DALVELTSRLRSYLYKEPFQKDTSPPVSL-------GLEESSSNNNVAAREVHSGIDPSS 540
           DA+VELTSRLR+YLYKEPFQKD SPPVSL       GLEESSSNNN AAREVHSG D S 
Sbjct: 481 DAVVELTSRLRNYLYKEPFQKDASPPVSLPSTMGSLGLEESSSNNNAAAREVHSGNDSSI 540

Query: 541 TAYQNVQPFGTAQLLKETGGSSNETSKQNENDRREDLPSGLNRIPVPLVTRSTLEVVIPE 600
           TAYQNVQPFGT QLLKE GGSSNET  QNENDRREDLPSGLNRIPVPLVTRSTLEVVIPE
Sbjct: 541 TAYQNVQPFGTPQLLKENGGSSNETGTQNENDRREDLPSGLNRIPVPLVTRSTLEVVIPE 600

Query: 601 PAVPKLITKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQAERAQSLLQGFIL 660
            AVPKLITKSKNKLAQISELSGANVTLVEDRPD TQKIIQISGTPEQAERAQSLLQGFIL
Sbjct: 601 AAVPKLITKSKNKLAQISELSGANVTLVEDRPDETQKIIQISGTPEQAERAQSLLQGFIL 660

[Close]

BLAST of MC10g0043 vs. NCBI nr
Match: XP_023552667.1 (RNA-binding KH domain-containing protein RCF3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1154 bits (2984), Expect = 0.0
Identity = 595/667 (89.21%), Postives = 621/667 (93.10%), Query Frame = 0


Query: 1   MEKSRSKRNYYYDHQDYDSEAMGRTRPRYNNHYANNNYRHRGSAARPSKPQDQSLMVTTT 60
           MEKSRSKRNYYYDHQDYDSEAMGRTRPRYNNHYANNNYRHRGSA RP+KPQDQSLMVTTT
Sbjct: 1   MEKSRSKRNYYYDHQDYDSEAMGRTRPRYNNHYANNNYRHRGSAVRPTKPQDQSLMVTTT 60

Query: 61  YRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELAPGDEERIIEISDTRRRDPEGRI 120
           YRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHEL PGDEERIIEISDTRRRDPEGR+
Sbjct: 61  YRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEISDTRRRDPEGRM 120

Query: 121 PPFSPAQEALFLIHDRILESDMSPGFNGMGYGAEDEDDDYGGVRGGAGGGGGGGRVATRL 180
           P FSPAQEALFLIH+RILES+MSPGFNGMGYG EDE+DDYGGVRGGAGGG    RVATRL
Sbjct: 121 PSFSPAQEALFLIHERILESEMSPGFNGMGYGPEDEEDDYGGVRGGAGGGSS--RVATRL 180

Query: 181 VVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGDANAVKN 240
           VVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVG+ANAVK 
Sbjct: 181 VVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGEANAVKK 240

Query: 241 AIAIVSSRLRESQHRDRSHLHGRLHSPERGFPPDDDYVPNISNTGRRLSMDGRTFRSRAS 300
           A+AIVSSRLRESQHR+RSH HGRLHSPER  PPDDDYVP I+   RRLSMDGR FR R S
Sbjct: 241 AVAIVSSRLRESQHRNRSHFHGRLHSPERILPPDDDYVPPIA---RRLSMDGRPFRPRIS 300

Query: 301 NARGNDYSNRQSSFSIEPGAPPVSDNVMPFYGEDLVFRILCPIDKVDSVIGESEGIIELL 360
           N RGNDYSNRQS+F +EPGA  V+DN+MPFYGEDLVFRILCPIDKVDSVIG+S+GIIELL
Sbjct: 301 NTRGNDYSNRQSNFLVEPGAASVNDNMMPFYGEDLVFRILCPIDKVDSVIGDSDGIIELL 360

Query: 361 RNEVGVDIKVSDPVTGSNERILTISSEEGPDDELFPAQEALLHIQTHIVDLIPDKDNVVT 420
           R+EVGVDIKVSDPVTGSNE+IL ISS+EGPDDELFPAQEALLHIQT IVDL+PDKDN+VT
Sbjct: 361 RDEVGVDIKVSDPVTGSNEQILIISSDEGPDDELFPAQEALLHIQTRIVDLVPDKDNIVT 420

Query: 421 TRLLVPSSDIVCLEGRDGSLLEMKRLTGANIQIVPREELPVFVSGADELIQIVGDIKAAR 480
           TRLLVPSSDI CLEGRDGSLLEMKRLTGAN+ IVPREELP+FVSGADEL+QI+GDIKAAR
Sbjct: 421 TRLLVPSSDIGCLEGRDGSLLEMKRLTGANVHIVPREELPMFVSGADELVQIIGDIKAAR 480

Query: 481 DALVELTSRLRSYLYKEPFQKDTSPPVSL-------GLEESSSNNNVAAREVHSGIDPSS 540
           DA+VELTSRLR+YLYKEP QKD SPPVSL       GLEESSSNNN AAREVHSG D S 
Sbjct: 481 DAVVELTSRLRNYLYKEPVQKDASPPVSLPSTMGSLGLEESSSNNNAAAREVHSGNDSSI 540

Query: 541 TAYQNVQPFGTAQLLKETGGSSNETSKQNENDRREDLPSGLNRIPVPLVTRSTLEVVIPE 600
           TAYQNVQPFGT QLLKE GGSSNET  QNENDRREDLPSGLNRIPVPLVTRSTLEVVIPE
Sbjct: 541 TAYQNVQPFGTPQLLKENGGSSNETGTQNENDRREDLPSGLNRIPVPLVTRSTLEVVIPE 600

Query: 601 PAVPKLITKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQAERAQSLLQGFIL 660
            AVPKLITKSKNKLAQISELSGANVTLVEDRPD TQKIIQISGTPEQAERAQSLLQGFIL
Sbjct: 601 AAVPKLITKSKNKLAQISELSGANVTLVEDRPDETQKIIQISGTPEQAERAQSLLQGFIL 660

[Close]

BLAST of MC10g0043 vs. ExPASy TrEMBL
Match: A0A6J1CHR1 (RNA-binding KH domain-containing protein RCF3 OS=Momordica charantia OX=3673 GN=LOC111011523 PE=4 SV=1)

HSP 1 Score: 1288 bits (3332), Expect = 0.0
Identity = 660/660 (100.00%), Postives = 660/660 (100.00%), Query Frame = 0


Query: 1   MEKSRSKRNYYYDHQDYDSEAMGRTRPRYNNHYANNNYRHRGSAARPSKPQDQSLMVTTT 60
           MEKSRSKRNYYYDHQDYDSEAMGRTRPRYNNHYANNNYRHRGSAARPSKPQDQSLMVTTT
Sbjct: 1   MEKSRSKRNYYYDHQDYDSEAMGRTRPRYNNHYANNNYRHRGSAARPSKPQDQSLMVTTT 60

Query: 61  YRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELAPGDEERIIEISDTRRRDPEGRI 120
           YRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELAPGDEERIIEISDTRRRDPEGRI
Sbjct: 61  YRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELAPGDEERIIEISDTRRRDPEGRI 120

Query: 121 PPFSPAQEALFLIHDRILESDMSPGFNGMGYGAEDEDDDYGGVRGGAGGGGGGGRVATRL 180
           PPFSPAQEALFLIHDRILESDMSPGFNGMGYGAEDEDDDYGGVRGGAGGGGGGGRVATRL
Sbjct: 121 PPFSPAQEALFLIHDRILESDMSPGFNGMGYGAEDEDDDYGGVRGGAGGGGGGGRVATRL 180

Query: 181 VVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGDANAVKN 240
           VVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGDANAVKN
Sbjct: 181 VVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGDANAVKN 240

Query: 241 AIAIVSSRLRESQHRDRSHLHGRLHSPERGFPPDDDYVPNISNTGRRLSMDGRTFRSRAS 300
           AIAIVSSRLRESQHRDRSHLHGRLHSPERGFPPDDDYVPNISNTGRRLSMDGRTFRSRAS
Sbjct: 241 AIAIVSSRLRESQHRDRSHLHGRLHSPERGFPPDDDYVPNISNTGRRLSMDGRTFRSRAS 300

Query: 301 NARGNDYSNRQSSFSIEPGAPPVSDNVMPFYGEDLVFRILCPIDKVDSVIGESEGIIELL 360
           NARGNDYSNRQSSFSIEPGAPPVSDNVMPFYGEDLVFRILCPIDKVDSVIGESEGIIELL
Sbjct: 301 NARGNDYSNRQSSFSIEPGAPPVSDNVMPFYGEDLVFRILCPIDKVDSVIGESEGIIELL 360

Query: 361 RNEVGVDIKVSDPVTGSNERILTISSEEGPDDELFPAQEALLHIQTHIVDLIPDKDNVVT 420
           RNEVGVDIKVSDPVTGSNERILTISSEEGPDDELFPAQEALLHIQTHIVDLIPDKDNVVT
Sbjct: 361 RNEVGVDIKVSDPVTGSNERILTISSEEGPDDELFPAQEALLHIQTHIVDLIPDKDNVVT 420

Query: 421 TRLLVPSSDIVCLEGRDGSLLEMKRLTGANIQIVPREELPVFVSGADELIQIVGDIKAAR 480
           TRLLVPSSDIVCLEGRDGSLLEMKRLTGANIQIVPREELPVFVSGADELIQIVGDIKAAR
Sbjct: 421 TRLLVPSSDIVCLEGRDGSLLEMKRLTGANIQIVPREELPVFVSGADELIQIVGDIKAAR 480

Query: 481 DALVELTSRLRSYLYKEPFQKDTSPPVSLGLEESSSNNNVAAREVHSGIDPSSTAYQNVQ 540
           DALVELTSRLRSYLYKEPFQKDTSPPVSLGLEESSSNNNVAAREVHSGIDPSSTAYQNVQ
Sbjct: 481 DALVELTSRLRSYLYKEPFQKDTSPPVSLGLEESSSNNNVAAREVHSGIDPSSTAYQNVQ 540

Query: 541 PFGTAQLLKETGGSSNETSKQNENDRREDLPSGLNRIPVPLVTRSTLEVVIPEPAVPKLI 600
           PFGTAQLLKETGGSSNETSKQNENDRREDLPSGLNRIPVPLVTRSTLEVVIPEPAVPKLI
Sbjct: 541 PFGTAQLLKETGGSSNETSKQNENDRREDLPSGLNRIPVPLVTRSTLEVVIPEPAVPKLI 600

Query: 601 TKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQAERAQSLLQGFILSMQEDGP 660
           TKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQAERAQSLLQGFILSMQEDGP
Sbjct: 601 TKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQAERAQSLLQGFILSMQEDGP 660

[Close]

BLAST of MC10g0043 vs. ExPASy TrEMBL
Match: A0A6J1E5R0 (RNA-binding KH domain-containing protein RCF3-like OS=Cucurbita moschata OX=3662 GN=LOC111430831 PE=4 SV=1)

HSP 1 Score: 1156 bits (2991), Expect = 0.0
Identity = 596/667 (89.36%), Postives = 622/667 (93.25%), Query Frame = 0


Query: 1   MEKSRSKRNYYYDHQDYDSEAMGRTRPRYNNHYANNNYRHRGSAARPSKPQDQSLMVTTT 60
           MEKSRSKRNYYYDHQDYDSEAMGRTRPRYNNHYANNNYRHRGSA RP+KPQDQSLMVTTT
Sbjct: 1   MEKSRSKRNYYYDHQDYDSEAMGRTRPRYNNHYANNNYRHRGSAVRPTKPQDQSLMVTTT 60

Query: 61  YRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELAPGDEERIIEISDTRRRDPEGRI 120
           YRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHEL PGDEERIIEISDTRRRDPEGR+
Sbjct: 61  YRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEISDTRRRDPEGRM 120

Query: 121 PPFSPAQEALFLIHDRILESDMSPGFNGMGYGAEDEDDDYGGVRGGAGGGGGGGRVATRL 180
           P FSPAQEALFLIH+RILES+MSPGFNGMGYG EDE+DDYGGVRGGAGGG    RVATRL
Sbjct: 121 PSFSPAQEALFLIHERILESEMSPGFNGMGYGPEDEEDDYGGVRGGAGGGSS--RVATRL 180

Query: 181 VVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGDANAVKN 240
           VVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVG+ANAVK 
Sbjct: 181 VVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGEANAVKK 240

Query: 241 AIAIVSSRLRESQHRDRSHLHGRLHSPERGFPPDDDYVPNISNTGRRLSMDGRTFRSRAS 300
           A+AIVSSRLRESQHR+RSH HGRLHSPER  PPDDDYVP I+   RRLSMDGR FR R S
Sbjct: 241 AVAIVSSRLRESQHRNRSHFHGRLHSPERILPPDDDYVPPIA---RRLSMDGRPFRPRIS 300

Query: 301 NARGNDYSNRQSSFSIEPGAPPVSDNVMPFYGEDLVFRILCPIDKVDSVIGESEGIIELL 360
           N RGNDYSNRQS+F +EPGA  V+DN+MPFYGEDLVFRILCPIDKVDSVIG+S+GIIELL
Sbjct: 301 NTRGNDYSNRQSNFLVEPGAASVNDNMMPFYGEDLVFRILCPIDKVDSVIGDSDGIIELL 360

Query: 361 RNEVGVDIKVSDPVTGSNERILTISSEEGPDDELFPAQEALLHIQTHIVDLIPDKDNVVT 420
           R+EVGVDIKVSDPVTGSNE+IL ISS+EGPDDELFPAQEALLHIQT IVDL+PDKDN+VT
Sbjct: 361 RDEVGVDIKVSDPVTGSNEQILIISSDEGPDDELFPAQEALLHIQTRIVDLVPDKDNIVT 420

Query: 421 TRLLVPSSDIVCLEGRDGSLLEMKRLTGANIQIVPREELPVFVSGADELIQIVGDIKAAR 480
           TRLLVPSSDI CLEGRDGSLLEMKRLTGAN+ IVPREELP+FVSGADEL+QI+GDIKAAR
Sbjct: 421 TRLLVPSSDIGCLEGRDGSLLEMKRLTGANVHIVPREELPMFVSGADELVQIIGDIKAAR 480

Query: 481 DALVELTSRLRSYLYKEPFQKDTSPPVSL-------GLEESSSNNNVAAREVHSGIDPSS 540
           DA+VELTSRLR+YLYKEPFQKD SPPVSL       GLEESSSNNN AAREVHSG D S 
Sbjct: 481 DAVVELTSRLRNYLYKEPFQKDASPPVSLPSTMGSLGLEESSSNNNAAAREVHSGNDSSI 540

Query: 541 TAYQNVQPFGTAQLLKETGGSSNETSKQNENDRREDLPSGLNRIPVPLVTRSTLEVVIPE 600
           TAYQNVQPFGT QLLKE GGSSNET  QNENDRREDLPSGLNRIPVPLVTRSTLEVVIPE
Sbjct: 541 TAYQNVQPFGTPQLLKENGGSSNETGTQNENDRREDLPSGLNRIPVPLVTRSTLEVVIPE 600

Query: 601 PAVPKLITKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQAERAQSLLQGFIL 660
            AVPKLITKSKNKLAQISELSGANVTLVEDRPD TQKIIQISGTPEQAERAQSLLQGFIL
Sbjct: 601 AAVPKLITKSKNKLAQISELSGANVTLVEDRPDETQKIIQISGTPEQAERAQSLLQGFIL 660

[Close]

BLAST of MC10g0043 vs. ExPASy TrEMBL
Match: A0A6J1J8S6 (RNA-binding KH domain-containing protein RCF3-like OS=Cucurbita maxima OX=3661 GN=LOC111482777 PE=4 SV=1)

HSP 1 Score: 1154 bits (2984), Expect = 0.0
Identity = 594/667 (89.06%), Postives = 622/667 (93.25%), Query Frame = 0


Query: 1   MEKSRSKRNYYYDHQDYDSEAMGRTRPRYNNHYANNNYRHRGSAARPSKPQDQSLMVTTT 60
           MEKSRSKRNYYYDHQDYDSEAMGRTRPRYNNHYANNNYRHRGSA RP+KPQDQSLMVTTT
Sbjct: 1   MEKSRSKRNYYYDHQDYDSEAMGRTRPRYNNHYANNNYRHRGSAVRPTKPQDQSLMVTTT 60

Query: 61  YRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELAPGDEERIIEISDTRRRDPEGRI 120
           YRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHEL PGDEERIIEISDTRRRDPEGR+
Sbjct: 61  YRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEISDTRRRDPEGRM 120

Query: 121 PPFSPAQEALFLIHDRILESDMSPGFNGMGYGAEDEDDDYGGVRGGAGGGGGGGRVATRL 180
           P FSPAQEALFLIH+RILES+MSPGFNGMGYG EDE+DDYGGVRGGAGGG    RV+TRL
Sbjct: 121 PSFSPAQEALFLIHERILESEMSPGFNGMGYGPEDEEDDYGGVRGGAGGGSS--RVSTRL 180

Query: 181 VVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGDANAVKN 240
           VVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGDANAVK 
Sbjct: 181 VVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGDANAVKK 240

Query: 241 AIAIVSSRLRESQHRDRSHLHGRLHSPERGFPPDDDYVPNISNTGRRLSMDGRTFRSRAS 300
           A+AIVSSRLRESQHR+RSH HGRLHSPER  PPDDDYVP I+   RRLSMDGR FR   S
Sbjct: 241 AVAIVSSRLRESQHRNRSHFHGRLHSPERILPPDDDYVPPIA---RRLSMDGRPFRPHIS 300

Query: 301 NARGNDYSNRQSSFSIEPGAPPVSDNVMPFYGEDLVFRILCPIDKVDSVIGESEGIIELL 360
           N RGNDYSNRQS+F +EPGA  V+DN+MPFYGEDLVFRILCPIDKVDSVIG+S+GIIELL
Sbjct: 301 NTRGNDYSNRQSNFLVEPGAASVNDNMMPFYGEDLVFRILCPIDKVDSVIGDSDGIIELL 360

Query: 361 RNEVGVDIKVSDPVTGSNERILTISSEEGPDDELFPAQEALLHIQTHIVDLIPDKDNVVT 420
           R+EVGVDIKVSDPVTGSNE+IL ISS+EGPDDELFPAQEALLHIQT IVDL+PDKD++VT
Sbjct: 361 RDEVGVDIKVSDPVTGSNEQILIISSDEGPDDELFPAQEALLHIQTRIVDLVPDKDDIVT 420

Query: 421 TRLLVPSSDIVCLEGRDGSLLEMKRLTGANIQIVPREELPVFVSGADELIQIVGDIKAAR 480
           TRLLVPSSDI CLEGRDGSLLEMKRLTGAN+ IVPREELP+FVSGADEL+QI+GDIKAAR
Sbjct: 421 TRLLVPSSDIGCLEGRDGSLLEMKRLTGANVHIVPREELPMFVSGADELVQIIGDIKAAR 480

Query: 481 DALVELTSRLRSYLYKEPFQKDTSPPVSL-------GLEESSSNNNVAAREVHSGIDPSS 540
           DA+VELTSRLR+YLYKEPFQKD SPPVSL       GLEESSSNNN +AREVHSG D S 
Sbjct: 481 DAVVELTSRLRNYLYKEPFQKDASPPVSLPSSMGSLGLEESSSNNNASAREVHSGNDSSI 540

Query: 541 TAYQNVQPFGTAQLLKETGGSSNETSKQNENDRREDLPSGLNRIPVPLVTRSTLEVVIPE 600
           TAYQNVQPFGTAQLLKE GGSSNET  QNENDRREDLPSGLNRIPVPLVTRSTLEVVIPE
Sbjct: 541 TAYQNVQPFGTAQLLKENGGSSNETGTQNENDRREDLPSGLNRIPVPLVTRSTLEVVIPE 600

Query: 601 PAVPKLITKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQAERAQSLLQGFIL 660
            AVPKLITKSKNKLAQISELSGANVTLVEDRPD TQKIIQISGTPEQAERAQSLLQGFIL
Sbjct: 601 AAVPKLITKSKNKLAQISELSGANVTLVEDRPDETQKIIQISGTPEQAERAQSLLQGFIL 660

[Close]

BLAST of MC10g0043 vs. ExPASy TrEMBL
Match: A0A1S3C2V2 (KH domain-containing protein At4g18375 OS=Cucumis melo OX=3656 GN=LOC103496048 PE=4 SV=1)

HSP 1 Score: 1147 bits (2966), Expect = 0.0
Identity = 594/670 (88.66%), Postives = 624/670 (93.13%), Query Frame = 0


Query: 1   MEKSRSKRNYYYDHQDYDSEAMGRTRPRYNN-HYANNNYRHRGSAARPSKPQDQSLMVTT 60
           MEKSRSKRNYYYDHQD+DSE+MGRTRPRYNN HY NNNYRHRG+A RPSKPQDQSLMVTT
Sbjct: 1   MEKSRSKRNYYYDHQDFDSESMGRTRPRYNNNHYPNNNYRHRGNAVRPSKPQDQSLMVTT 60

Query: 61  TYRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELAPGDEERIIEISDTRRRDPEGR 120
           TYRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHEL PGDEERIIEISDTRRRDPEGR
Sbjct: 61  TYRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEISDTRRRDPEGR 120

Query: 121 IPPFSPAQEALFLIHDRILESDMSPGFNGMGYGAEDEDDDYGGVRGGAGGGGGGGRVATR 180
           +P FSPAQEALFLIH+RILES+MSPGFNGMGYG EDE+DDYGGVRGG GG G GGRVATR
Sbjct: 121 MPSFSPAQEALFLIHERILESEMSPGFNGMGYGPEDEEDDYGGVRGG-GGSGCGGRVATR 180

Query: 181 LVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGDANAVK 240
           LVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGD NAVK
Sbjct: 181 LVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGDTNAVK 240

Query: 241 NAIAIVSSRLRESQHRDRSHLHGRLHSPERGFPPDDDYVPNISNTGRRLSMDGRTFRSR- 300
            AIAIVSSRLRESQHRDRSH HGRLHSPER FPPDDDYVP+     RRL MDGR FR R 
Sbjct: 241 KAIAIVSSRLRESQHRDRSHFHGRLHSPERIFPPDDDYVPH---NARRLPMDGRPFRPRM 300

Query: 301 -ASNARGNDYSNRQSSFSIEPGAPPVSDNVMPFYGEDLVFRILCPIDKVDSVIGESEGII 360
            ASN+RGNDYSNRQS+F +EPGA PV+DN+MPFYGEDLVFRILCPI+K+DSVIGES GII
Sbjct: 301 SASNSRGNDYSNRQSNFMVEPGAAPVNDNMMPFYGEDLVFRILCPIEKIDSVIGESNGII 360

Query: 361 ELLRNEVGVDIKVSDPVTGSNERILTISSEEGPDDELFPAQEALLHIQTHIVDLIPDKDN 420
           ELLRN+VGVDIKVSDPVTGSNE+IL ISS+EGPDDELFPAQEALLHIQT IVDL+PDK+N
Sbjct: 361 ELLRNDVGVDIKVSDPVTGSNEQILIISSDEGPDDELFPAQEALLHIQTRIVDLVPDKEN 420

Query: 421 VVTTRLLVPSSDIVCLEGRDGSLLEMKRLTGANIQIVPREELPVFVSGADELIQIVGDIK 480
           +VTTRLLVPSSDI CLEGRDGSLLEMKRLTGAN+ IVPRE+LP+FVSGADEL+QI+GDIK
Sbjct: 421 IVTTRLLVPSSDIGCLEGRDGSLLEMKRLTGANVHIVPREDLPMFVSGADELVQIIGDIK 480

Query: 481 AARDALVELTSRLRSYLYKEPFQKDTSPPVS-------LGLEESSSNNNVAAREVHSGID 540
           AARDALVELTSRLR+ LYKEPFQKD SP VS       LGLEESSSNNN AAREVHSG D
Sbjct: 481 AARDALVELTSRLRNCLYKEPFQKDASPQVSVQSTMVSLGLEESSSNNNAAAREVHSGND 540

Query: 541 PSSTAYQNVQPFGTAQLLKETGGSSNETSKQNENDRREDLPSGLNRIPVPLVTRSTLEVV 600
            +STA+QNVQPFGTAQLLKETGGSSNET  QNENDRREDLPSGLNRIPVPLVTRSTLEVV
Sbjct: 541 SASTAFQNVQPFGTAQLLKETGGSSNETGTQNENDRREDLPSGLNRIPVPLVTRSTLEVV 600

Query: 601 IPEPAVPKLITKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQAERAQSLLQG 660
           IPEPAVPKLITKSKNKLAQISELSGANV LVEDRPDVTQKIIQISGTPEQAERAQSLLQG
Sbjct: 601 IPEPAVPKLITKSKNKLAQISELSGANVMLVEDRPDVTQKIIQISGTPEQAERAQSLLQG 660

[Close]

BLAST of MC10g0043 vs. ExPASy TrEMBL
Match: A0A0A0L6Q2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G238210 PE=4 SV=1)

HSP 1 Score: 1145 bits (2963), Expect = 0.0
Identity = 593/670 (88.51%), Postives = 625/670 (93.28%), Query Frame = 0


Query: 1   MEKSRSKRNYYYDHQDYDSEAMGRTRPRYNN-HYANNNYRHRGSAARPSKPQDQSLMVTT 60
           MEKSRSKRNYYYDHQD+DS++MGRTRPRYNN HY NNNYRHRG+A RPSKPQDQSLMVTT
Sbjct: 1   MEKSRSKRNYYYDHQDFDSDSMGRTRPRYNNNHYPNNNYRHRGNAVRPSKPQDQSLMVTT 60

Query: 61  TYRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELAPGDEERIIEISDTRRRDPEGR 120
           TYRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHEL PGDEERIIEISDTRRRDPEGR
Sbjct: 61  TYRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEISDTRRRDPEGR 120

Query: 121 IPPFSPAQEALFLIHDRILESDMSPGFNGMGYGAEDEDDDYGGVRGGAGGGGGGGRVATR 180
           +P FSPAQEALFLIH+RILES+MSPGFNGMGYG EDE+DDYGGVRGG GGGG GGRVATR
Sbjct: 121 MPSFSPAQEALFLIHERILESEMSPGFNGMGYGPEDEEDDYGGVRGG-GGGGCGGRVATR 180

Query: 181 LVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGDANAVK 240
           LVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGD NAVK
Sbjct: 181 LVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGDTNAVK 240

Query: 241 NAIAIVSSRLRESQHRDRSHLHGRLHSPERGFPPDDDYVPNISNTGRRLSMDGRTFRSR- 300
            AIAIVSSRLRESQHRDRSH HGRLHSPER FPP+DDYVP+     RRL MDGR FR R 
Sbjct: 241 KAIAIVSSRLRESQHRDRSHFHGRLHSPERIFPPEDDYVPH---NARRLPMDGRPFRPRM 300

Query: 301 -ASNARGNDYSNRQSSFSIEPGAPPVSDNVMPFYGEDLVFRILCPIDKVDSVIGESEGII 360
            ASN RGNDYS+RQS+F +EPGA PV+DN+MPFYGEDLVF+ILCPI+KVDSVIGES GII
Sbjct: 301 SASNTRGNDYSSRQSNFMVEPGAAPVNDNMMPFYGEDLVFKILCPIEKVDSVIGESNGII 360

Query: 361 ELLRNEVGVDIKVSDPVTGSNERILTISSEEGPDDELFPAQEALLHIQTHIVDLIPDKDN 420
           ELLRN+VGVDIKVSDPVTGSNE+IL ISS+EGPDDELFPAQEALLHIQT IVDL+PDK+N
Sbjct: 361 ELLRNDVGVDIKVSDPVTGSNEQILIISSDEGPDDELFPAQEALLHIQTRIVDLVPDKEN 420

Query: 421 VVTTRLLVPSSDIVCLEGRDGSLLEMKRLTGANIQIVPREELPVFVSGADELIQIVGDIK 480
           +VTTRLLVPSSDI CLEGRDGSLLEMKRLTGAN+ IVPRE+LP+FVSGADEL+QI+GDIK
Sbjct: 421 IVTTRLLVPSSDIGCLEGRDGSLLEMKRLTGANVHIVPREDLPMFVSGADELVQIIGDIK 480

Query: 481 AARDALVELTSRLRSYLYKEPFQKDTSPPVS-------LGLEESSSNNNVAAREVHSGID 540
           AARDALVELTSRLR+ LYKEPFQKD SP VS       LGLEESSSNNN AAREVHSG D
Sbjct: 481 AARDALVELTSRLRNCLYKEPFQKDASPQVSVQSTMVSLGLEESSSNNNAAAREVHSGND 540

Query: 541 PSSTAYQNVQPFGTAQLLKETGGSSNETSKQNENDRREDLPSGLNRIPVPLVTRSTLEVV 600
            +STA+QNVQPFGTAQLLKETGGSSNET  QNENDRREDLPSGLNRIPVPLVTRSTLEVV
Sbjct: 541 SASTAFQNVQPFGTAQLLKETGGSSNETGTQNENDRREDLPSGLNRIPVPLVTRSTLEVV 600

Query: 601 IPEPAVPKLITKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQAERAQSLLQG 660
           IPEPAVPKLITKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQAERAQSLLQG
Sbjct: 601 IPEPAVPKLITKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQAERAQSLLQG 660

[Close]

BLAST of MC10g0043 vs. TAIR 10
Match: AT5G53060.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 766.9 bits (1979), Expect = 1.3e-221
Identity = 429/683 (62.81%), Postives = 516/683 (75.55%), Query Frame = 0


Query: 1   MEKSRSKRNYYYDHQDYDSEAMGRTRPRYNNHY-------ANNNYRHRGSA----ARPSK 60
           ME+SRSKRNY+YD QDYD ++M R++PRYNN+Y        NN YR  G       RPSK
Sbjct: 1   MERSRSKRNYHYD-QDYDGDSMPRSKPRYNNNYHFGGGGGGNNRYRGGGGGGGGNGRPSK 60

Query: 61  PQDQSLMVTTTYRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELAPGDEERIIEIS 120
              ++ M TTTYRILCHDAKAGGVIGKSG+IIKSIRQHTGAWINVHEL PGD ERIIEIS
Sbjct: 61  SHPET-MATTTYRILCHDAKAGGVIGKSGTIIKSIRQHTGAWINVHELVPGDAERIIEIS 120

Query: 121 DTRRRDPEGRIPPFSPAQEALFLIHDRILESDMSPGFNGMGYGAEDEDDDYGGVRGGAGG 180
           D RRRDP+GR+P FSPAQEALF +HDRILES+   G+ G      +E++DYGGVR     
Sbjct: 121 DNRRRDPDGRMPSFSPAQEALFSVHDRILESEAQFGYGG---PPPEEEEDYGGVR----- 180

Query: 181 GGGGGRVATRLVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIV 240
             GGGRV TRLVVSRMHVGCLLGKGGKIIEQMR+ETKT IRILPR+ NLPRC+S+SEEIV
Sbjct: 181 -PGGGRVVTRLVVSRMHVGCLLGKGGKIIEQMRIETKTHIRILPRESNLPRCVSLSEEIV 240

Query: 241 QIVGDANAVKNAIAIVSSRLRESQHRDRSHLHGRLHSPERGF-PPDDDYVPNISNTGRRL 300
           QIVG+ NAVKNA+AIVSSRLRESQHRDRS+  GR HSPER F    DDY+P +    RR 
Sbjct: 241 QIVGELNAVKNALAIVSSRLRESQHRDRSNFQGRSHSPERSFAAAGDDYMPQL----RRQ 300

Query: 301 SMDGRTFRSRASNARGNDYSNRQSSFSIEPGAPPVSDNVMPFYGEDLVFRILCPIDKVDS 360
           S D    R    N R N++S+RQS+++ E  A PV +NV   Y E+LVF+ILCP DK+  
Sbjct: 301 SSD----RFPRGNFRNNNFSSRQSNYAEEAPAVPVGENV---YSEELVFQILCPADKIVR 360

Query: 361 VIGESEGIIELLRNEVGVDIKVSDPVTGSNERILTISSEEGPDDELFPAQEALLHIQTHI 420
           V+GES+GII+LL+NE+GVD++VSDPV GS+E+I+TISSEE PDD  FPAQEALLHIQT I
Sbjct: 361 VVGESQGIIDLLQNEIGVDVRVSDPVAGSDEQIITISSEEAPDDPFFPAQEALLHIQTQI 420

Query: 421 VDLIPDKDNVVTTRLLVPSSDIVCLEGRDGSLLEMKRLTGANIQIVPREELPVFVSGADE 480
           +DLIPDKDN++TTRLLVPS D +CLEG+ GS+ E+ RLTG ++QI+ REE+P   S  D 
Sbjct: 421 IDLIPDKDNLITTRLLVPSRDSICLEGKAGSVSEISRLTGTSVQILAREEIPRCASINDV 480

Query: 481 LIQIVGDIKAARDALVELTSRLRSYLYKEPFQKDTSPPVSLG-----------LEESSSN 540
           +IQI G+I+AAR+ALVELT  LRS+++KE  QK+T PP S             +E +SSN
Sbjct: 481 VIQITGEIRAAREALVELTLLLRSHMFKELSQKET-PPASTSTTGPLEGVAGVMEVASSN 540

Query: 541 NNVAAREVHSGIDPSSTAYQNVQPFGTAQLLKETGGSSNETSKQNENDRREDLPSGLNRI 600
           N + +RE      P+S+     Q        KE  GS    +K  E++ RE++P   +R+
Sbjct: 541 NTIQSRE-----GPTSSNLNLQQVSTILPQFKEGFGS---VAKAGESEHREEVPVTTSRM 600

Query: 601 PVPLVTRSTLEVVIPEPAVPKLITKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGT 660
            VPLVTRSTLEVV+PE  VPKL+TKS+NKLAQISE SGA+VT+VEDRP+ TQ II+ISGT
Sbjct: 601 AVPLVTRSTLEVVLPEAVVPKLVTKSRNKLAQISEWSGASVTIVEDRPEETQNIIRISGT 652

[Close]

BLAST of MC10g0043 vs. TAIR 10
Match: AT5G53060.2 (RNA-binding KH domain-containing protein )

HSP 1 Score: 246.1 bits (627), Expect = 7.7e-65
Identity = 135/202 (66.83%), Postives = 153/202 (75.74%), Query Frame = 0


Query: 1   MEKSRSKRNYYYDHQDYDSEAMGRTRPRYNNHY-------ANNNYRHRGSA----ARPSK 60
           ME+SRSKRNY+YD QDYD ++M R++PRYNN+Y        NN YR  G       RPSK
Sbjct: 1   MERSRSKRNYHYD-QDYDGDSMPRSKPRYNNNYHFGGGGGGNNRYRGGGGGGGGNGRPSK 60

Query: 61  PQDQSLMVTTTYRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELAPGDEERIIEIS 120
              ++ M TTTYRILCHDAKAGGVIGKSG+IIKSIRQHTGAWINVHEL PGD ERIIEIS
Sbjct: 61  SHPET-MATTTYRILCHDAKAGGVIGKSGTIIKSIRQHTGAWINVHELVPGDAERIIEIS 120

Query: 121 DTRRRDPEGRIPPFSPAQEALFLIHDRILESDMSPGFNGMGYGAEDEDDDYGGVRGGAGG 180
           D RRRDP+GR+P FSPAQEALF +HDRILES+   G+ G      +E++DYGGVR     
Sbjct: 121 DNRRRDPDGRMPSFSPAQEALFSVHDRILESEAQFGYGG---PPPEEEEDYGGVR----- 180

Query: 181 GGGGGRVATRLVVSRMHVGCLL 192
             GGGRV TRLVVSRMHVGCLL
Sbjct: 181 -PGGGRVVTRLVVSRMHVGCLL 191

[Close]

BLAST of MC10g0043 vs. TAIR 10
Match: AT5G15270.2 (RNA-binding KH domain-containing protein )

HSP 1 Score: 221.5 bits (563), Expect = 2.0e-57
Identity = 163/493 (33.06%), Postives = 254/493 (51.52%), Query Frame = 0


Query: 13  DHQDYDSEAMGRTRPRYNNHYANNNYRHRGSAARPSKPQDQSLMV----TTTYRILCHDA 72
           DH+D   +   R+RP+       ++Y   G + R  +  D+  +V     T +R LC   
Sbjct: 10  DHRDSHRK---RSRPQ-------SDYDDNGGSKRRYRGDDRDSLVIDRDDTVFRYLCPVK 69

Query: 73  KAGGVIGKSGSIIKSIRQHTGAWINVHELAPGDEERIIEI---SDTRRRDPEGRIPPFSP 132
           K G VIG+ G I+K +R  T + I + E  PG +ER+I I   SD      +G     SP
Sbjct: 70  KIGSVIGRGGDIVKQLRNDTRSKIRIGEAIPGCDERVITIYSPSDETNAFGDGE-KVLSP 129

Query: 133 AQEALFLIHDRILESDMSPGFNGMGYGAEDEDDDYGGVRGGAGGGGGGGRVATRLVVSRM 192
           AQ+ALF IHDR++  D           A  ED              G  +V  +L+V   
Sbjct: 130 AQDALFRIHDRVVADD-----------ARSEDSP-----------EGEKQVTAKLLVPSD 189

Query: 193 HVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGDANAVKNAIAIV 252
            +GC+LG+GG+I++ +R ET  QIRI+ +D N+P C   S+E++QI G+   VK A+  +
Sbjct: 190 QIGCILGRGGQIVQNIRSETGAQIRIV-KDRNMPLCALNSDELIQISGEVLIVKKALLQI 249

Query: 253 SSRLRESQHRDRSHLHGRLHSPERGFPPDDDYVPNISNTGRRLSMDGRTFRSRASNARGN 312
           +SRL E+  R ++     L S   G+P            G  +S  G       +   G+
Sbjct: 250 ASRLHENPSRSQN-----LLSSSGGYP-----------AGSLMSHAGGPRLVGLAPLMGS 309

Query: 313 DYSNRQSSFSIEPGAPPVSDNVMPFYGEDLVFRILCPIDKVDSVIGESEGIIELLRNEVG 372
            Y      +S     PP +D        +   R++ P++ + SVIG+   +I  LR E  
Sbjct: 310 -YGRDAGDWSRPLYQPPRNDPP----ATEFFIRLVSPVENIASVIGKGGALINQLRQETR 369

Query: 373 VDIKVSDPVTGSNERILTISSEEGPDDELFPAQEALLHIQTHIVDLIPDKDNVV--TTRL 432
             IKV    T  N+ ++TIS+ E  +D   P  EA++ +Q    D +     +V  TTRL
Sbjct: 370 ATIKVDSSRTEGNDCLITISAREVFEDAYSPTIEAVMRLQPKCSDKVERDSGLVSFTTRL 429

Query: 433 LVPSSDIVCLEGRDGSLL-EMKRLTGANIQIVPREELPVFVSGADELIQIVGDIKAARDA 492
           LVPSS I C+ G+ G+++ EM+R+T ANI+I+ +E LP   S  DE++QI G++  A++A
Sbjct: 430 LVPSSRIGCILGKGGAIITEMRRMTKANIRILGKENLPKVASDDDEMVQISGELDVAKEA 447

Query: 493 LVELTSRLRSYLY 496
           L+++TSRLR+ ++
Sbjct: 490 LIQITSRLRANVF 447

[Close]

BLAST of MC10g0043 vs. TAIR 10
Match: AT5G15270.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 221.5 bits (563), Expect = 2.0e-57
Identity = 163/493 (33.06%), Postives = 254/493 (51.52%), Query Frame = 0


Query: 13  DHQDYDSEAMGRTRPRYNNHYANNNYRHRGSAARPSKPQDQSLMV----TTTYRILCHDA 72
           DH+D   +   R+RP+       ++Y   G + R  +  D+  +V     T +R LC   
Sbjct: 10  DHRDSHRK---RSRPQ-------SDYDDNGGSKRRYRGDDRDSLVIDRDDTVFRYLCPVK 69

Query: 73  KAGGVIGKSGSIIKSIRQHTGAWINVHELAPGDEERIIEI---SDTRRRDPEGRIPPFSP 132
           K G VIG+ G I+K +R  T + I + E  PG +ER+I I   SD      +G     SP
Sbjct: 70  KIGSVIGRGGDIVKQLRNDTRSKIRIGEAIPGCDERVITIYSPSDETNAFGDGE-KVLSP 129

Query: 133 AQEALFLIHDRILESDMSPGFNGMGYGAEDEDDDYGGVRGGAGGGGGGGRVATRLVVSRM 192
           AQ+ALF IHDR++  D           A  ED              G  +V  +L+V   
Sbjct: 130 AQDALFRIHDRVVADD-----------ARSEDSP-----------EGEKQVTAKLLVPSD 189

Query: 193 HVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGDANAVKNAIAIV 252
            +GC+LG+GG+I++ +R ET  QIRI+ +D N+P C   S+E++QI G+   VK A+  +
Sbjct: 190 QIGCILGRGGQIVQNIRSETGAQIRIV-KDRNMPLCALNSDELIQISGEVLIVKKALLQI 249

Query: 253 SSRLRESQHRDRSHLHGRLHSPERGFPPDDDYVPNISNTGRRLSMDGRTFRSRASNARGN 312
           +SRL E+  R ++     L S   G+P            G  +S  G       +   G+
Sbjct: 250 ASRLHENPSRSQN-----LLSSSGGYP-----------AGSLMSHAGGPRLVGLAPLMGS 309

Query: 313 DYSNRQSSFSIEPGAPPVSDNVMPFYGEDLVFRILCPIDKVDSVIGESEGIIELLRNEVG 372
            Y      +S     PP +D        +   R++ P++ + SVIG+   +I  LR E  
Sbjct: 310 -YGRDAGDWSRPLYQPPRNDPP----ATEFFIRLVSPVENIASVIGKGGALINQLRQETR 369

Query: 373 VDIKVSDPVTGSNERILTISSEEGPDDELFPAQEALLHIQTHIVDLIPDKDNVV--TTRL 432
             IKV    T  N+ ++TIS+ E  +D   P  EA++ +Q    D +     +V  TTRL
Sbjct: 370 ATIKVDSSRTEGNDCLITISAREVFEDAYSPTIEAVMRLQPKCSDKVERDSGLVSFTTRL 429

Query: 433 LVPSSDIVCLEGRDGSLL-EMKRLTGANIQIVPREELPVFVSGADELIQIVGDIKAARDA 492
           LVPSS I C+ G+ G+++ EM+R+T ANI+I+ +E LP   S  DE++QI G++  A++A
Sbjct: 430 LVPSSRIGCILGKGGAIITEMRRMTKANIRILGKENLPKVASDDDEMVQISGELDVAKEA 447

Query: 493 LVELTSRLRSYLY 496
           L+++TSRLR+ ++
Sbjct: 490 LIQITSRLRANVF 447

[Close]

BLAST of MC10g0043 vs. TAIR 10
Match: AT1G51580.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 186.4 bits (472), Expect = 7.3e-47
Identity = 171/656 (26.07%), Postives = 293/656 (44.66%), Query Frame = 0


Query: 61  YRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHE--LAPGDEERIIEISDTRRRDPEG 120
           +R+LC   + G +IGK GS+I+ ++  TG+ I V +    P +E  ++ I+ + ++  E 
Sbjct: 21  FRLLCPATRTGAIIGKGGSVIRHLQSVTGSKIRVIDDIPVPSEERVVLIIAPSGKKKDES 80

Query: 121 RI----------------------------PPFSPAQEALFLIHDRILESDMSPGFNGMG 180
            +                               S AQ AL  + +RI+  D +   +G  
Sbjct: 81  NVCDSENPGSEEPKQEKGSECAGTSGGDDEEAPSSAQMALLRVFERIVFGDDAATVDG-- 140

Query: 181 YGAEDEDDDYGGVRGGAGGGGGGGRVATRLVVSRMHVGCLLGKGGKIIEQMRMETKTQIR 240
               DE D             G      R++V    V  L+ KGGK+I+++R ++   +R
Sbjct: 141 ----DELDK------------GESEGLCRMIVRGNQVDYLMSKGGKMIQKIREDSGAIVR 200

Query: 241 ILPRDHNLPRCISMSEEIVQIVGDANAVKNAIAIVSSRLRESQHRDRSHLHGRLHSPERG 300
           I   D  +P C    + ++Q+ G  ++VK A+ +V++ L+ES              P+ G
Sbjct: 201 ISSTD-QIPPCAFPGDVVIQMNGKFSSVKKALLLVTNCLQES---GAPPTWDECPFPQPG 260

Query: 301 FPPDDDYVPNISNTGRRLSMDGRTFRSRASNARGNDYSNRQSSFSIEPGAPPVSDNVMPF 360
           +PP+                    + S   + + +            P   P+ ++V PF
Sbjct: 261 YPPE--------------------YHSMEYHPQWD-----------HPPPNPMPEDVGPF 320

Query: 361 ----YGEDLVFRILCPIDKVDSVIGESEGIIELLRNEVGVDIKVSDPVTGSNERILTISS 420
                 E++ FR+LCP DKV S+IG+   ++  L+NE G  IKVSDP   S ERI+ IS+
Sbjct: 321 NRPVVEEEVAFRLLCPADKVGSLIGKGGAVVRALQNESGASIKVSDPTHDSEERIIVISA 380

Query: 421 EEGPDDELFPAQEALLHIQTHIVDLIPDKDNVVTTRLLVPSSDIVCLEGRDGSLL-EMKR 480
            E  +     AQ+ ++ +   IV++  +    V  RLLV S  I  L G+ G L+ EM+R
Sbjct: 381 RENLERRHSLAQDGVMRVHNRIVEIGFEPSAAVVARLLVHSPYIGRLLGKGGHLISEMRR 440

Query: 481 LTGANIQIVPREELPVFVSGADELIQIVGDIKAARDALVELTSRLRSYLY--KEPFQKDT 540
            TGA+I++  +++   + S  DE++Q++G++K  +DAL ++  RLR  ++  + PFQ   
Sbjct: 441 ATGASIRVFAKDQATKYESQHDEIVQVIGNLKTVQDALFQILCRLREAMFPGRLPFQGMG 500

Query: 541 SPPVSLGLEESSSNNNVAARE-------VHSGIDPSSTAYQNVQPFG------------- 600
            PP                R+        HS + P    + +   F              
Sbjct: 501 GPPPPFMGPYPEPPPPFGPRQYPASPDRYHSPVGPFHERHCHGPGFDRPPGPGFDRPPSP 560

Query: 601 ---TAQLLKETGGSSNETSKQNENDRREDLPSGLNRIPVPLVTRSTLEVVIPEPAVPKLI 657
              T Q   +           N      + P G      P++T + +E+VIP+  +  + 
Sbjct: 561 MSWTPQPGIDGHPGGMVPPDVNHGFALRNEPIGSEN---PVMTSANVEIVIPQAYLGHVY 620

The following BLAST results are available for this feature:

BLAST of MC10g0043 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8W4B1	1.8e-220	62.81	RNA-binding KH domain-containing protein RCF3 OS=Arabidopsis thaliana OX=3702 GN...	[more]
P58223	2.9e-40	27.04	KH domain-containing protein At4g18375 OS=Arabidopsis thaliana OX=3702 GN=At4g18...	[more]
F4KDN0	1.3e-37	23.33	KH domain-containing protein HEN4 OS=Arabidopsis thaliana OX=3702 GN=HEN4 PE=1 S...	[more]
Q9SR13	3.7e-19	24.72	Flowering locus K homology domain OS=Arabidopsis thaliana OX=3702 GN=FLK PE=1 SV...	[more]
Q5E9A3	1.3e-08	23.56	Poly(rC)-binding protein 1 OS=Bos taurus OX=9913 GN=PCBP1 PE=2 SV=1	[more]

BLAST of MC10g0043 vs. NCBI nr


Match Name	Identity	Description
XP_022141016.1	100.00	RNA-binding KH domain-containing protein RCF3 [Momordica charantia]	[more]
XP_038891418.1	89.96	RNA-binding KH domain-containing protein RCF3 [Benincasa hispida]	[more]
XP_022923031.1	89.36	RNA-binding KH domain-containing protein RCF3-like [Cucurbita moschata] >KAG7014...	[more]
KAG6576646.1	89.21	RNA-binding KH domain-containing protein RCF3, partial [Cucurbita argyrosperma s...	[more]
XP_023552667.1	89.21	RNA-binding KH domain-containing protein RCF3-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of MC10g0043 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A6J1CHR1	100.00	RNA-binding KH domain-containing protein RCF3 OS=Momordica charantia OX=3673 GN=...	[more]
A0A6J1E5R0	89.36	RNA-binding KH domain-containing protein RCF3-like OS=Cucurbita moschata OX=3662...	[more]
A0A6J1J8S6	89.06	RNA-binding KH domain-containing protein RCF3-like OS=Cucurbita maxima OX=3661 G...	[more]
A0A1S3C2V2	88.66	KH domain-containing protein At4g18375 OS=Cucumis melo OX=3656 GN=LOC103496048 P...	[more]
A0A0A0L6Q2	88.51	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G238210 PE=4 SV=1	[more]

BLAST of MC10g0043 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G53060.1	1.3e-221	62.81	RNA-binding KH domain-containing protein	[more]
AT5G53060.2	7.7e-65	66.83	RNA-binding KH domain-containing protein	[more]
AT5G15270.2	2.0e-57	33.06	RNA-binding KH domain-containing protein	[more]
AT5G15270.1	2.0e-57	33.06	RNA-binding KH domain-containing protein	[more]
AT1G51580.1	7.3e-47	26.07	RNA-binding KH domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004087	K Homology domain	SMART	SM00322	kh_6	coord: 333..406 e-value: 0.073 score: 22.2 coord: 583..653 e-value: 0.0028 score: 26.9 coord: 57..138 e-value: 7.8E-7 score: 38.7 coord: 417..491 e-value: 0.8 score: 16.4 coord: 174..250 e-value: 2.4E-6 score: 37.1
IPR036612	K Homology domain, type 1 superfamily	GENE3D	3.30.1370.10	K Homology domain, type 1	coord: 57..140 e-value: 1.6E-15 score: 58.6
IPR036612	K Homology domain, type 1 superfamily	GENE3D	3.30.1370.10	K Homology domain, type 1	coord: 583..654 e-value: 3.7E-11 score: 44.5
IPR036612	K Homology domain, type 1 superfamily	GENE3D	3.30.1370.10	K Homology domain, type 1	coord: 173..254 e-value: 9.6E-16 score: 59.3
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 412..499
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 576..656
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 327..391
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 173..256
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 52..110
None	No IPR available	GENE3D	3.30.310.210		coord: 333..494 e-value: 4.4E-22 score: 80.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 282..319
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 253..272
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 549..576
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 253..320
None	No IPR available	PANTHER	PTHR10288	KH DOMAIN CONTAINING RNA BINDING PROTEIN	coord: 3..562
None	No IPR available	PANTHER	PTHR10288:SF134	RNA-BINDING KH DOMAIN-CONTAINING PROTEIN RCF3	coord: 3..562
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 58..133 score: 12.034547
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 175..245 score: 14.130867
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 584..648 score: 12.705369
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 334..401 score: 10.609049
None	No IPR available	CDD	cd00105	KH-I	coord: 586..649 e-value: 2.91842E-9 score: 51.7919
None	No IPR available	CDD	cd02396	PCBP_like_KH	coord: 60..134 e-value: 1.86202E-18 score: 77.9019
None	No IPR available	CDD	cd02396	PCBP_like_KH	coord: 179..246 e-value: 3.67037E-15 score: 68.2719
IPR004088	K Homology domain, type 1	PFAM	PF00013	KH_1	coord: 586..649 e-value: 5.9E-8 score: 32.4 coord: 337..389 e-value: 7.6E-5 score: 22.5 coord: 60..109 e-value: 3.5E-10 score: 39.6 coord: 178..245 e-value: 2.5E-11 score: 43.2

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC10g0043.1	MC10g0043.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010468	regulation of gene expression
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003723	RNA binding