MC09g_new0473 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC09g_new0473
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionPentatricopeptide repeat-containing protein
LocationMC09: 22433046 .. 22435409 (+)
RNA-Seq ExpressionMC09g_new0473
SyntenyMC09g_new0473
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTTCTGGCTATCCCACCAATTGCACAGTCTATTGCAGTAGAATTCAAGCACGACACTTTCCGTACCCACCAAAGTCGGCTTCTTCAATTGCTGAGCCACTGTACTGATTTGTCACAGCTCAAGAAAATCCACGCTCGCGCACTTCGTAGCTTCTCGACCCACGAATCATCTCTCTTCCTCTTTAGCCGAATTCTCCACGTTTCATCTTTAATTGATTTCGATTATGCCTGTCGAGTTTTCGATCGAATCGATAACCCCAATTCGTTCATGTGGAACACTCTCATCGGTGCTTGTGCACGGAGCTTCGACCGTAAAGAACAGGCGATTCTGCTCTTCTACAGAATGTTAGAAGAAGGCTCTGTTGAACCAGATAAACATACTTTTCCTTTTCTTCTTAAAGCTTGCGCTTATGTATTTGCTTTATCTGAAGGGAAACAAGCGCATGCTCATATTGTAAAACTTGGGTTGGACTCGGATGTTTATGTTGGCAATAGCTTGATTCATTTATATGCTTCTTGCGGGTGTTTGAATTTTGCACTGAAGCTGTTCGAGAAAATGCCTAAGAGAAGTTTGGTTTCGTGGAATGTGACGATTGATGCATTTGTTCAATGTGGACTCTTCGAAAATGCTCTCAAGCTATTTGTTGAAATGCAGGACGTTTTTGAGCCCGATGGATATACAATGCAGAGTGTTATAAGCGCTTGTGCCGGTATTGGGGCTTTATCTCTGGGGATGTGGGCTCATGCTTATGTTTTGAGGAAGGCCGGGGGGGCTATGTCTGCTGATGTCCTGATCAACTCCTCACTTGTGGATATGTACAGCAAATGTGGTTCTTTGAGAATGGCTCAGGAAGTATTTGAGACAATGCCCAAACATGACCTGAATTCATGGAATTCAATGATTCTAGGACTTGCCATGCACGGACGGGCGGAGTCTGCATTGCGGTGTTTCTCTCGGTTGGTCAAGATGAAGCAGTTTCTGCCCAACTCTGTCACGTTCGTCGGCGTTCTTAGTGCGTGTAACCACAGAGGCATGGTTGCTGAAGGCCGGAAATATTTTGATATGATGGTTAATGAATACAAGATTGAACCGCGGTTGGAGCATTATGGATGCCTTGTTGACCTTTTATCTCGCTCTGGTTTCATTGATGAAGCTTTGGAGTTGGTGGCAAATATGCATATAAAACCAGATGCAGTGATCTGGAGGAGTCTTCTTGATGCTTGTTGCAAGCAGAATGCTGGTGTCGAGCTGAGCGAAGAAGTGGCATTGCAGATTCTTGAATCTGAAAAAGCAGCTTCTAGTGGTGTTTATGTGCTGTTGTCCAAAGTTTATGCTTCTGCTTGTCAGTGGAACGATGCTGGGCTCGTAAGGAAAGCGATGGCCGATCAGGGTGTGGCAAAGGAGCCTGGCTGCAGTTTGATAGAAGTAGATGGTATTAGCCATGAGTTTTTTGCAGGAGATGCATCTCACCCCAAGATCAAGGAGATTTATGATGTTATCGATCTGATTGAAGAAAAACTAGAGAAGGATGGTTATTCACCTGACTATTCACAGGCAACCATGGTAGACGAACCAGATAACGTGAAACAGCAATCTCTTAGGCTGCATAGTGAGCGACTTGCCATTGCCTTTGGGCTACTAAATATGAAACCCGGTATGCCGATACGCATATTTAAGAATCTCCGAGTGTGCAATGACTGCCACCAGGTAACCAAGTCAATTTCTCGAATTTTCAATGTAGAGATTATCATGAGAGATCGCAATAGATTTCATCATGTTAAGAATGGCTTGTGTTCCTGCATGGACTTCTGGTGATTTATTGTACACCAGCCATTAAAGTTATAATTCAATAGTACAGAAATGTAGATGGGAACTGTTGGAAAATCATTGTAATGCCAATTAAACGTGAATTAACGAAATTCCTGAAGTTGAAACCTTTCCAAAATTCATAATCACACGGCCCCCTGAAGGTGTATGGGCCTTGTCAGTATATCACAAAGGCGAGGCTGCATAGAACTTAAGTTTTTTCATTTAAATAATACAAAAGGCTTCCTAAATTCGGCTGCAATGACTGGTATGGAAAACTACATCTATCACAAGGAAACTTTAAGAAAGGGGGAAATATTCACATCTTCTGGGAACCCCTAATTAACAAGTAGTTAGAAGATGCAAAAAAGAAACAAAAAAAAAAATTTGAACACTACAGAAGCAAAATCGACTTATATAATCTTCTATGGATGGCTTGAACCTTCCTGTGTTGTAATGCCAAATAAGAATCAGAATCTGAGTGTCTGAACCAATGTGAGACTTGTCTGGTGCGTGTAACAGCCACAATCTCTTGTTCCCAATGCATATCAGTAA

mRNA sequence

ATGCTTCTGGCTATCCCACCAATTGCACAGTCTATTGCAGTAGAATTCAAGCACGACACTTTCCGTACCCACCAAAGTCGGCTTCTTCAATTGCTGAGCCACTGTACTGATTTGTCACAGCTCAAGAAAATCCACGCTCGCGCACTTCGTAGCTTCTCGACCCACGAATCATCTCTCTTCCTCTTTAGCCGAATTCTCCACGTTTCATCTTTAATTGATTTCGATTATGCCTGTCGAGTTTTCGATCGAATCGATAACCCCAATTCGTTCATGTGGAACACTCTCATCGGTGCTTGTGCACGGAGCTTCGACCGTAAAGAACAGGCGATTCTGCTCTTCTACAGAATGTTAGAAGAAGGCTCTGTTGAACCAGATAAACATACTTTTCCTTTTCTTCTTAAAGCTTGCGCTTATGTATTTGCTTTATCTGAAGGGAAACAAGCGCATGCTCATATTGTAAAACTTGGGTTGGACTCGGATGTTTATGTTGGCAATAGCTTGATTCATTTATATGCTTCTTGCGGGTGTTTGAATTTTGCACTGAAGCTGTTCGAGAAAATGCCTAAGAGAAGTTTGGTTTCGTGGAATGTGACGATTGATGCATTTGTTCAATGTGGACTCTTCGAAAATGCTCTCAAGCTATTTGTTGAAATGCAGGACGTTTTTGAGCCCGATGGATATACAATGCAGAGTGTTATAAGCGCTTGTGCCGGTATTGGGGCTTTATCTCTGGGGATGTGGGCTCATGCTTATGTTTTGAGGAAGGCCGGGGGGGCTATGTCTGCTGATCCACAATCTCTTGTTCCCAATGCATATCAGTAA

Coding sequence (CDS)

ATGCTTCTGGCTATCCCACCAATTGCACAGTCTATTGCAGTAGAATTCAAGCACGACACTTTCCGTACCCACCAAAGTCGGCTTCTTCAATTGCTGAGCCACTGTACTGATTTGTCACAGCTCAAGAAAATCCACGCTCGCGCACTTCGTAGCTTCTCGACCCACGAATCATCTCTCTTCCTCTTTAGCCGAATTCTCCACGTTTCATCTTTAATTGATTTCGATTATGCCTGTCGAGTTTTCGATCGAATCGATAACCCCAATTCGTTCATGTGGAACACTCTCATCGGTGCTTGTGCACGGAGCTTCGACCGTAAAGAACAGGCGATTCTGCTCTTCTACAGAATGTTAGAAGAAGGCTCTGTTGAACCAGATAAACATACTTTTCCTTTTCTTCTTAAAGCTTGCGCTTATGTATTTGCTTTATCTGAAGGGAAACAAGCGCATGCTCATATTGTAAAACTTGGGTTGGACTCGGATGTTTATGTTGGCAATAGCTTGATTCATTTATATGCTTCTTGCGGGTGTTTGAATTTTGCACTGAAGCTGTTCGAGAAAATGCCTAAGAGAAGTTTGGTTTCGTGGAATGTGACGATTGATGCATTTGTTCAATGTGGACTCTTCGAAAATGCTCTCAAGCTATTTGTTGAAATGCAGGACGTTTTTGAGCCCGATGGATATACAATGCAGAGTGTTATAAGCGCTTGTGCCGGTATTGGGGCTTTATCTCTGGGGATGTGGGCTCATGCTTATGTTTTGAGGAAGGCCGGGGGGGCTATGTCTGCTGATCCACAATCTCTTGTTCCCAATGCATATCAGTAA

Protein sequence

MLLAIPPIAQSIAVEFKHDTFRTHQSRLLQLLSHCTDLSQLKKIHARALRSFSTHESSLFLFSRILHVSSLIDFDYACRVFDRIDNPNSFMWNTLIGACARSFDRKEQAILLFYRMLEEGSVEPDKHTFPFLLKACAYVFALSEGKQAHAHIVKLGLDSDVYVGNSLIHLYASCGCLNFALKLFEKMPKRSLVSWNVTIDAFVQCGLFENALKLFVEMQDVFEPDGYTMQSVISACAGIGALSLGMWAHAYVLRKAGGAMSADPQSLVPNAYQ
Homology
BLAST of MC09g_new0473 vs. ExPASy Swiss-Prot
Match: Q0WQW5 (Pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H51 PE=1 SV=2)

HSP 1 Score: 294.7 bits (753), Expect = 1.1e-78
Identity = 147/261 (56.32%), Postives = 186/261 (71.26%), Query Frame = 0

Query: 5   IPPIAQSIAVEFKHDTFRTHQSRLLQLLSHCTDLSQLKKIHARALR-SFSTHESSLFLFS 64
           IPP +   A      T   H  R+  L   C+D+SQLK++HA  LR ++    ++LFL+ 
Sbjct: 33  IPPASSPSA-----STAGNHHQRIFSLAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYG 92

Query: 65  RILHV-SSLIDFDYACRVFDRIDNPNSFMWNTLIGACARSFDRKEQAILLFYRMLEEGSV 124
           +IL + SS  D +YA RVFD I+N +SFMWNTLI ACA    RKE+A +L+ +MLE G  
Sbjct: 93  KILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGES 152

Query: 125 EPDKHTFPFLLKACAYVFALSEGKQAHAHIVKLGLDSDVYVGNSLIHLYASCGCLNFALK 184
            PDKHTFPF+LKACAY+F  SEGKQ H  IVK G   DVYV N LIHLY SCGCL+ A K
Sbjct: 153 SPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARK 212

Query: 185 LFEKMPKRSLVSWNVTIDAFVQCGLFENALKLFVEMQDVFEPDGYTMQSVISACAGIGAL 244
           +F++MP+RSLVSWN  IDA V+ G +++AL+LF EMQ  FEPDGYTMQSV+SACAG+G+L
Sbjct: 213 VFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRSFEPDGYTMQSVLSACAGLGSL 272

Query: 245 SLGMWAHAYVLRKAGGAMSAD 264
           SLG WAHA++LRK    ++ D
Sbjct: 273 SLGTWAHAFLLRKCDVDVAMD 288

BLAST of MC09g_new0473 vs. ExPASy Swiss-Prot
Match: A8MQA3 (Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H28 PE=2 SV=2)

HSP 1 Score: 163.3 bits (412), Expect = 3.8e-39
Identity = 90/224 (40.18%), Postives = 136/224 (60.71%), Query Frame = 0

Query: 36  TDLSQLKKIHARALR---SFSTHESSLFLFSRILHVSSLIDFDYACRVFDRIDNP-NSFM 95
           + +++L++IHA ++R   S S  E    L   ++ + S     YA +VF +I+ P N F+
Sbjct: 28  SSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFI 87

Query: 96  WNTLIGACARSFDRKEQAILLFYRMLEEGSVEPDKHTFPFLLKACAYVFALSEGKQAHAH 155
           WNTLI   A        A  L+  M   G VEPD HT+PFL+KA   +  +  G+  H+ 
Sbjct: 88  WNTLIRGYA-EIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSV 147

Query: 156 IVKLGLDSDVYVGNSLIHLYASCGCLNFALKLFEKMPKRSLVSWNVTIDAFVQCGLFENA 215
           +++ G  S +YV NSL+HLYA+CG +  A K+F+KMP++ LV+WN  I+ F + G  E A
Sbjct: 148 VIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEA 207

Query: 216 LKLFVEMQDV-FEPDGYTMQSVISACAGIGALSLGMWAHAYVLR 255
           L L+ EM     +PDG+T+ S++SACA IGAL+LG   H Y+++
Sbjct: 208 LALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIK 250

BLAST of MC09g_new0473 vs. ExPASy Swiss-Prot
Match: O82380 (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 8.6e-39
Identity = 99/236 (41.95%), Postives = 136/236 (57.63%), Query Frame = 0

Query: 20  TFRTHQSRLLQLLSHCTDLSQLKKIHARALR--SFSTHESSLFLFSRILHVSSLIDFDYA 79
           T    +SR + L+  C  L QLK+ H   +R  +FS   S+  LF+ +  +SS    +YA
Sbjct: 25  TTNNERSRHISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFA-MAALSSFASLEYA 84

Query: 80  CRVFDRIDNPNSFMWNTLIGACARSFDRKEQAILLFYRMLEEGSVEPDKHTFPFLLKACA 139
            +VFD I  PNSF WNTLI A A   D    +I  F  M+ E    P+K+TFPFL+KA A
Sbjct: 85  RKVFDEIPKPNSFAWNTLIRAYASGPD-PVLSIWAFLDMVSESQCYPNKYTFPFLIKAAA 144

Query: 140 YVFALSEGKQAHAHIVKLGLDSDVYVGNSLIHLYASCGCLNFALKLFEKMPKRSLVSWNV 199
            V +LS G+  H   VK  + SDV+V NSLIH Y SCG L+ A K+F  + ++ +VSWN 
Sbjct: 145 EVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNS 204

Query: 200 TIDAFVQCGLFENALKLFVEMQ-DVFEPDGYTMQSVISACAGIGALSLGMWAHAYV 253
            I+ FVQ G  + AL+LF +M+ +  +    TM  V+SACA I  L  G    +Y+
Sbjct: 205 MINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYI 258

BLAST of MC09g_new0473 vs. ExPASy Swiss-Prot
Match: Q9SJG6 (Pentatricopeptide repeat-containing protein At2g42920, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-E75 PE=2 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 1.5e-35
Identity = 90/257 (35.02%), Postives = 142/257 (55.25%), Query Frame = 0

Query: 33  SHCTDLSQLKKIHARALRSFSTHESSLFLFSRILH--VSSLIDFDYACRVFDRIDNPNSF 92
           + C+ + +LK+IHA  +++     S     SR+L    +S  D +YA  VF RI++ N F
Sbjct: 33  TQCSTMRELKQIHASLIKTGLI--SDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPF 92

Query: 93  MWNTLIGACARSFDRKEQAILLFYRML-EEGSVEPDKHTFPFLLKACAYVFALSEGKQAH 152
           +WNT+I   +RS    E AI +F  ML    SV+P + T+P + KA   +    +G+Q H
Sbjct: 93  VWNTIIRGFSRS-SFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLH 152

Query: 153 AHIVKLGLDSDVYVGNSLIHLYASCGCL-------------------------------N 212
             ++K GL+ D ++ N+++H+Y +CGCL                               +
Sbjct: 153 GMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLID 212

Query: 213 FALKLFEKMPKRSLVSWNVTIDAFVQCGLFENALKLFVEMQDV-FEPDGYTMQSVISACA 255
            A  LF++MP+R+ VSWN  I  FV+ G F++AL +F EMQ+   +PDG+TM S+++ACA
Sbjct: 213 QAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACA 272

BLAST of MC09g_new0473 vs. ExPASy Swiss-Prot
Match: Q9C6T2 (Pentatricopeptide repeat-containing protein At1g31920 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H11 PE=2 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 4.1e-33
Identity = 80/241 (33.20%), Postives = 134/241 (55.60%), Query Frame = 0

Query: 19  DTFRTHQSRLLQLLSHCTDLSQLKKIHARALR---SFSTHESSLFLFSRILHVSSLIDFD 78
           + F   +   L LL  C ++ + K++HAR ++    +S+  S+  + ++  H       +
Sbjct: 24  NNFGGKEQECLYLLKRCHNIDEFKQVHARFIKLSLFYSSSFSASSVLAKCAHSGWENSMN 83

Query: 79  YACRVFDRIDNPNSFMWNTLIGACARSFDRKEQAILLFYRMLEEGSVEPDKHTFPFLLKA 138
           YA  +F  ID+P +F +NT+I          E+A+  +  M++ G+ EPD  T+P LLKA
Sbjct: 84  YAASIFRGIDDPCTFDFNTMIRGYVNVMS-FEEALCFYNEMMQRGN-EPDNFTYPCLLKA 143

Query: 139 CAYVFALSEGKQAHAHIVKLGLDSDVYVGNSLIHLYASCGCLNFALKLFEKMPKRSLVSW 198
           C  + ++ EGKQ H  + KLGL++DV+V NSLI++Y  CG +  +  +FEK+  ++  SW
Sbjct: 144 CTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASW 203

Query: 199 NVTIDAFVQCGLFENALKLFVEM--QDVFEPDGYTMQSVISACAGIGALSLGMWAHAYVL 255
           +  + A    G++   L LF  M  +   + +   M S + ACA  GAL+LGM  H ++L
Sbjct: 204 SSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLL 262

BLAST of MC09g_new0473 vs. NCBI nr
Match: XP_022151200.1 (pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial [Momordica charantia])

HSP 1 Score: 533 bits (1372), Expect = 1.55e-185
Identity = 263/263 (100.00%), Postives = 263/263 (100.00%), Query Frame = 0

Query: 1   MLLAIPPIAQSIAVEFKHDTFRTHQSRLLQLLSHCTDLSQLKKIHARALRSFSTHESSLF 60
           MLLAIPPIAQSIAVEFKHDTFRTHQSRLLQLLSHCTDLSQLKKIHARALRSFSTHESSLF
Sbjct: 1   MLLAIPPIAQSIAVEFKHDTFRTHQSRLLQLLSHCTDLSQLKKIHARALRSFSTHESSLF 60

Query: 61  LFSRILHVSSLIDFDYACRVFDRIDNPNSFMWNTLIGACARSFDRKEQAILLFYRMLEEG 120
           LFSRILHVSSLIDFDYACRVFDRIDNPNSFMWNTLIGACARSFDRKEQAILLFYRMLEEG
Sbjct: 61  LFSRILHVSSLIDFDYACRVFDRIDNPNSFMWNTLIGACARSFDRKEQAILLFYRMLEEG 120

Query: 121 SVEPDKHTFPFLLKACAYVFALSEGKQAHAHIVKLGLDSDVYVGNSLIHLYASCGCLNFA 180
           SVEPDKHTFPFLLKACAYVFALSEGKQAHAHIVKLGLDSDVYVGNSLIHLYASCGCLNFA
Sbjct: 121 SVEPDKHTFPFLLKACAYVFALSEGKQAHAHIVKLGLDSDVYVGNSLIHLYASCGCLNFA 180

Query: 181 LKLFEKMPKRSLVSWNVTIDAFVQCGLFENALKLFVEMQDVFEPDGYTMQSVISACAGIG 240
           LKLFEKMPKRSLVSWNVTIDAFVQCGLFENALKLFVEMQDVFEPDGYTMQSVISACAGIG
Sbjct: 181 LKLFEKMPKRSLVSWNVTIDAFVQCGLFENALKLFVEMQDVFEPDGYTMQSVISACAGIG 240

Query: 241 ALSLGMWAHAYVLRKAGGAMSAD 263
           ALSLGMWAHAYVLRKAGGAMSAD
Sbjct: 241 ALSLGMWAHAYVLRKAGGAMSAD 263

BLAST of MC09g_new0473 vs. NCBI nr
Match: XP_008446291.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial [Cucumis melo])

HSP 1 Score: 462 bits (1189), Expect = 1.02e-157
Identity = 223/263 (84.79%), Postives = 244/263 (92.78%), Query Frame = 0

Query: 1   MLLAIPPIAQSIAVEFKHDTFRTHQSRLLQLLSHCTDLSQLKKIHARALRSFSTHESSLF 60
           MLLAIPP +QS  +E K +TF THQSRLL LL+ CTDLS+LK+IHA+A+R+FSTH+SSLF
Sbjct: 7   MLLAIPPNSQSFPIEIKRETFNTHQSRLLHLLTDCTDLSKLKQIHAQAIRNFSTHKSSLF 66

Query: 61  LFSRILHVSSLIDFDYACRVFDRIDNPNSFMWNTLIGACARSFDRKEQAILLFYRMLEEG 120
           L+SRILHVSSLIDFDYACRVF++I NPNSFMWNTLIGACARS DRKEQAI +FYRMLEEG
Sbjct: 67  LYSRILHVSSLIDFDYACRVFNQIGNPNSFMWNTLIGACARSLDRKEQAIEIFYRMLEEG 126

Query: 121 SVEPDKHTFPFLLKACAYVFALSEGKQAHAHIVKLGLDSDVYVGNSLIHLYASCGCLNFA 180
           SVEPDKHTFPFLLKACAYVFALSEG+QAHAHI KLGLD DVYVGNSLIHLYASCGCL+ A
Sbjct: 127 SVEPDKHTFPFLLKACAYVFALSEGRQAHAHIFKLGLDLDVYVGNSLIHLYASCGCLSMA 186

Query: 181 LKLFEKMPKRSLVSWNVTIDAFVQCGLFENALKLFVEMQDVFEPDGYTMQSVISACAGIG 240
           LK+FEKMP RSLVSWNV IDA+VQCGLFENALKLF EMQ+ FEPDGYTMQS+ISACAGIG
Sbjct: 187 LKVFEKMPLRSLVSWNVMIDAYVQCGLFENALKLFFEMQNSFEPDGYTMQSIISACAGIG 246

Query: 241 ALSLGMWAHAYVLRKAGGAMSAD 263
           ALSLGMWAHAYVLRKAGGAM+ D
Sbjct: 247 ALSLGMWAHAYVLRKAGGAMAGD 269

BLAST of MC09g_new0473 vs. NCBI nr
Match: XP_038892628.1 (pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial [Benincasa hispida])

HSP 1 Score: 457 bits (1177), Expect = 5.52e-156
Identity = 222/263 (84.41%), Postives = 242/263 (92.02%), Query Frame = 0

Query: 1   MLLAIPPIAQSIAVEFKHDTFRTHQSRLLQLLSHCTDLSQLKKIHARALRSFSTHESSLF 60
           MLLAIPP AQSI +E K +TF THQSRLL LL+HCTDLS+LK+IHA+ +R+FSTH+SSLF
Sbjct: 1   MLLAIPPNAQSIPIEIKRETFHTHQSRLLHLLTHCTDLSKLKQIHAQVIRNFSTHKSSLF 60

Query: 61  LFSRILHVSSLIDFDYACRVFDRIDNPNSFMWNTLIGACARSFDRKEQAILLFYRMLEEG 120
           L+SRILHVSSL DFDYACRVF +I NPNSFMWNTLIGACARS DRKEQAI LFY MLEEG
Sbjct: 61  LYSRILHVSSLTDFDYACRVFYQIGNPNSFMWNTLIGACARSLDRKEQAIELFYGMLEEG 120

Query: 121 SVEPDKHTFPFLLKACAYVFALSEGKQAHAHIVKLGLDSDVYVGNSLIHLYASCGCLNFA 180
           SVEPDKHTFPFLLKACAYVFALSEG+QAHAHIVKLGLDSDVYVGNSLIHLYASCGCL+ A
Sbjct: 121 SVEPDKHTFPFLLKACAYVFALSEGRQAHAHIVKLGLDSDVYVGNSLIHLYASCGCLSIA 180

Query: 181 LKLFEKMPKRSLVSWNVTIDAFVQCGLFENALKLFVEMQDVFEPDGYTMQSVISACAGIG 240
           LK+FEKMP RSLVSWNV IDA+VQCG FENALKLFV+MQ+ FEPDGYTMQS+I ACAGIG
Sbjct: 181 LKVFEKMPLRSLVSWNVMIDAYVQCGDFENALKLFVDMQNSFEPDGYTMQSIIGACAGIG 240

Query: 241 ALSLGMWAHAYVLRKAGGAMSAD 263
           ALS+GMWAHAYVLRKA GAM+ D
Sbjct: 241 ALSVGMWAHAYVLRKANGAMAND 263

BLAST of MC09g_new0473 vs. NCBI nr
Match: XP_023537748.1 (pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 457 bits (1176), Expect = 7.82e-156
Identity = 222/263 (84.41%), Postives = 241/263 (91.63%), Query Frame = 0

Query: 1   MLLAIPPIAQSIAVEFKHDTFRTHQSRLLQLLSHCTDLSQLKKIHARALRSFSTHESSLF 60
           M+L+IPP  QSI VE KH+TF   QSRLL LLS CTDLS+LK+IHA+ALR+FSTH+SSLF
Sbjct: 1   MILSIPPNGQSIPVEIKHETFHAPQSRLLHLLSDCTDLSRLKQIHAQALRTFSTHKSSLF 60

Query: 61  LFSRILHVSSLIDFDYACRVFDRIDNPNSFMWNTLIGACARSFDRKEQAILLFYRMLEEG 120
           LFSRILHVSSL DF+YA RVFD+ID+PNSFMWNTLIGACARS DRKEQA  LFYRMLEEG
Sbjct: 61  LFSRILHVSSLTDFEYALRVFDQIDSPNSFMWNTLIGACARSLDRKEQANKLFYRMLEEG 120

Query: 121 SVEPDKHTFPFLLKACAYVFALSEGKQAHAHIVKLGLDSDVYVGNSLIHLYASCGCLNFA 180
           SVEPDKHTFPFLLKACAYVFALSEG+QAHAHIVK GLDSDVYVGNSLIHLYASCGCL+ A
Sbjct: 121 SVEPDKHTFPFLLKACAYVFALSEGRQAHAHIVKRGLDSDVYVGNSLIHLYASCGCLSLA 180

Query: 181 LKLFEKMPKRSLVSWNVTIDAFVQCGLFENALKLFVEMQDVFEPDGYTMQSVISACAGIG 240
           LK+FEKMP RSLVSWNV IDA+VQCGLFENALKLF EMQD FEPDGYTMQS+ISACAGIG
Sbjct: 181 LKVFEKMPHRSLVSWNVMIDAYVQCGLFENALKLFAEMQDTFEPDGYTMQSIISACAGIG 240

Query: 241 ALSLGMWAHAYVLRKAGGAMSAD 263
           ALSLGMW+HAYVLRK GGAM+ +
Sbjct: 241 ALSLGMWSHAYVLRKTGGAMAGE 263

BLAST of MC09g_new0473 vs. NCBI nr
Match: XP_022957211.1 (pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial [Cucurbita moschata])

HSP 1 Score: 454 bits (1169), Expect = 8.97e-155
Identity = 221/263 (84.03%), Postives = 240/263 (91.25%), Query Frame = 0

Query: 1   MLLAIPPIAQSIAVEFKHDTFRTHQSRLLQLLSHCTDLSQLKKIHARALRSFSTHESSLF 60
           MLL+IPP  QSI VE KH+TF   QSRLL LLS CTDLS+LK+IHA+ALR+FSTH+SSLF
Sbjct: 1   MLLSIPPNGQSIPVEIKHETFHARQSRLLHLLSDCTDLSRLKQIHAQALRTFSTHKSSLF 60

Query: 61  LFSRILHVSSLIDFDYACRVFDRIDNPNSFMWNTLIGACARSFDRKEQAILLFYRMLEEG 120
           LFSRILHVSSL DF+YA RVFD+ID+PNSFMWNTLIGACARS DRKEQAI LFYRMLEEG
Sbjct: 61  LFSRILHVSSLTDFEYALRVFDQIDSPNSFMWNTLIGACARSLDRKEQAIELFYRMLEEG 120

Query: 121 SVEPDKHTFPFLLKACAYVFALSEGKQAHAHIVKLGLDSDVYVGNSLIHLYASCGCLNFA 180
           SVEPDKHTFPFLLKACAYVFALSEG+QAHAHIVK GLDSDVYVGNSLIHLYASCGCL+ A
Sbjct: 121 SVEPDKHTFPFLLKACAYVFALSEGRQAHAHIVKRGLDSDVYVGNSLIHLYASCGCLSLA 180

Query: 181 LKLFEKMPKRSLVSWNVTIDAFVQCGLFENALKLFVEMQDVFEPDGYTMQSVISACAGIG 240
           LK+FEKMP RSLVSWNV IDA+VQCGLF+NAL LF EMQ+ FEPDGYTMQS+ISACAGIG
Sbjct: 181 LKVFEKMPHRSLVSWNVMIDAYVQCGLFKNALNLFAEMQNTFEPDGYTMQSIISACAGIG 240

Query: 241 ALSLGMWAHAYVLRKAGGAMSAD 263
           ALSLGMW+HAYVLRK GGAM  +
Sbjct: 241 ALSLGMWSHAYVLRKTGGAMVGE 263

BLAST of MC09g_new0473 vs. ExPASy TrEMBL
Match: A0A6J1DAJ2 (pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial OS=Momordica charantia OX=3673 GN=LOC111019179 PE=3 SV=1)

HSP 1 Score: 533 bits (1372), Expect = 7.51e-186
Identity = 263/263 (100.00%), Postives = 263/263 (100.00%), Query Frame = 0

Query: 1   MLLAIPPIAQSIAVEFKHDTFRTHQSRLLQLLSHCTDLSQLKKIHARALRSFSTHESSLF 60
           MLLAIPPIAQSIAVEFKHDTFRTHQSRLLQLLSHCTDLSQLKKIHARALRSFSTHESSLF
Sbjct: 1   MLLAIPPIAQSIAVEFKHDTFRTHQSRLLQLLSHCTDLSQLKKIHARALRSFSTHESSLF 60

Query: 61  LFSRILHVSSLIDFDYACRVFDRIDNPNSFMWNTLIGACARSFDRKEQAILLFYRMLEEG 120
           LFSRILHVSSLIDFDYACRVFDRIDNPNSFMWNTLIGACARSFDRKEQAILLFYRMLEEG
Sbjct: 61  LFSRILHVSSLIDFDYACRVFDRIDNPNSFMWNTLIGACARSFDRKEQAILLFYRMLEEG 120

Query: 121 SVEPDKHTFPFLLKACAYVFALSEGKQAHAHIVKLGLDSDVYVGNSLIHLYASCGCLNFA 180
           SVEPDKHTFPFLLKACAYVFALSEGKQAHAHIVKLGLDSDVYVGNSLIHLYASCGCLNFA
Sbjct: 121 SVEPDKHTFPFLLKACAYVFALSEGKQAHAHIVKLGLDSDVYVGNSLIHLYASCGCLNFA 180

Query: 181 LKLFEKMPKRSLVSWNVTIDAFVQCGLFENALKLFVEMQDVFEPDGYTMQSVISACAGIG 240
           LKLFEKMPKRSLVSWNVTIDAFVQCGLFENALKLFVEMQDVFEPDGYTMQSVISACAGIG
Sbjct: 181 LKLFEKMPKRSLVSWNVTIDAFVQCGLFENALKLFVEMQDVFEPDGYTMQSVISACAGIG 240

Query: 241 ALSLGMWAHAYVLRKAGGAMSAD 263
           ALSLGMWAHAYVLRKAGGAMSAD
Sbjct: 241 ALSLGMWAHAYVLRKAGGAMSAD 263

BLAST of MC09g_new0473 vs. ExPASy TrEMBL
Match: A0A1S3BE78 (pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial OS=Cucumis melo OX=3656 GN=LOC103489069 PE=3 SV=1)

HSP 1 Score: 462 bits (1189), Expect = 4.93e-158
Identity = 223/263 (84.79%), Postives = 244/263 (92.78%), Query Frame = 0

Query: 1   MLLAIPPIAQSIAVEFKHDTFRTHQSRLLQLLSHCTDLSQLKKIHARALRSFSTHESSLF 60
           MLLAIPP +QS  +E K +TF THQSRLL LL+ CTDLS+LK+IHA+A+R+FSTH+SSLF
Sbjct: 7   MLLAIPPNSQSFPIEIKRETFNTHQSRLLHLLTDCTDLSKLKQIHAQAIRNFSTHKSSLF 66

Query: 61  LFSRILHVSSLIDFDYACRVFDRIDNPNSFMWNTLIGACARSFDRKEQAILLFYRMLEEG 120
           L+SRILHVSSLIDFDYACRVF++I NPNSFMWNTLIGACARS DRKEQAI +FYRMLEEG
Sbjct: 67  LYSRILHVSSLIDFDYACRVFNQIGNPNSFMWNTLIGACARSLDRKEQAIEIFYRMLEEG 126

Query: 121 SVEPDKHTFPFLLKACAYVFALSEGKQAHAHIVKLGLDSDVYVGNSLIHLYASCGCLNFA 180
           SVEPDKHTFPFLLKACAYVFALSEG+QAHAHI KLGLD DVYVGNSLIHLYASCGCL+ A
Sbjct: 127 SVEPDKHTFPFLLKACAYVFALSEGRQAHAHIFKLGLDLDVYVGNSLIHLYASCGCLSMA 186

Query: 181 LKLFEKMPKRSLVSWNVTIDAFVQCGLFENALKLFVEMQDVFEPDGYTMQSVISACAGIG 240
           LK+FEKMP RSLVSWNV IDA+VQCGLFENALKLF EMQ+ FEPDGYTMQS+ISACAGIG
Sbjct: 187 LKVFEKMPLRSLVSWNVMIDAYVQCGLFENALKLFFEMQNSFEPDGYTMQSIISACAGIG 246

Query: 241 ALSLGMWAHAYVLRKAGGAMSAD 263
           ALSLGMWAHAYVLRKAGGAM+ D
Sbjct: 247 ALSLGMWAHAYVLRKAGGAMAGD 269

BLAST of MC09g_new0473 vs. ExPASy TrEMBL
Match: A0A6J1GYL5 (pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111458669 PE=3 SV=1)

HSP 1 Score: 454 bits (1169), Expect = 4.34e-155
Identity = 221/263 (84.03%), Postives = 240/263 (91.25%), Query Frame = 0

Query: 1   MLLAIPPIAQSIAVEFKHDTFRTHQSRLLQLLSHCTDLSQLKKIHARALRSFSTHESSLF 60
           MLL+IPP  QSI VE KH+TF   QSRLL LLS CTDLS+LK+IHA+ALR+FSTH+SSLF
Sbjct: 1   MLLSIPPNGQSIPVEIKHETFHARQSRLLHLLSDCTDLSRLKQIHAQALRTFSTHKSSLF 60

Query: 61  LFSRILHVSSLIDFDYACRVFDRIDNPNSFMWNTLIGACARSFDRKEQAILLFYRMLEEG 120
           LFSRILHVSSL DF+YA RVFD+ID+PNSFMWNTLIGACARS DRKEQAI LFYRMLEEG
Sbjct: 61  LFSRILHVSSLTDFEYALRVFDQIDSPNSFMWNTLIGACARSLDRKEQAIELFYRMLEEG 120

Query: 121 SVEPDKHTFPFLLKACAYVFALSEGKQAHAHIVKLGLDSDVYVGNSLIHLYASCGCLNFA 180
           SVEPDKHTFPFLLKACAYVFALSEG+QAHAHIVK GLDSDVYVGNSLIHLYASCGCL+ A
Sbjct: 121 SVEPDKHTFPFLLKACAYVFALSEGRQAHAHIVKRGLDSDVYVGNSLIHLYASCGCLSLA 180

Query: 181 LKLFEKMPKRSLVSWNVTIDAFVQCGLFENALKLFVEMQDVFEPDGYTMQSVISACAGIG 240
           LK+FEKMP RSLVSWNV IDA+VQCGLF+NAL LF EMQ+ FEPDGYTMQS+ISACAGIG
Sbjct: 181 LKVFEKMPHRSLVSWNVMIDAYVQCGLFKNALNLFAEMQNTFEPDGYTMQSIISACAGIG 240

Query: 241 ALSLGMWAHAYVLRKAGGAMSAD 263
           ALSLGMW+HAYVLRK GGAM  +
Sbjct: 241 ALSLGMWSHAYVLRKTGGAMVGE 263

BLAST of MC09g_new0473 vs. ExPASy TrEMBL
Match: A0A6J1KA08 (pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111492988 PE=3 SV=1)

HSP 1 Score: 450 bits (1158), Expect = 2.01e-153
Identity = 219/263 (83.27%), Postives = 241/263 (91.63%), Query Frame = 0

Query: 1   MLLAIPPIAQSIAVEFKHDTFRTHQSRLLQLLSHCTDLSQLKKIHARALRSFSTHESSLF 60
           MLL+IPP  QSI VE KH+TF   QS LL LLS+CTDLS+LK+IHA+ALR+FSTH+SSLF
Sbjct: 1   MLLSIPPNGQSIPVEIKHETFHARQSGLLHLLSNCTDLSRLKQIHAQALRTFSTHKSSLF 60

Query: 61  LFSRILHVSSLIDFDYACRVFDRIDNPNSFMWNTLIGACARSFDRKEQAILLFYRMLEEG 120
           LFSRILHVSSL DF+YA RVFD+ID+PNSFMWNTLIGACARS DRK+QAI LFYRMLEEG
Sbjct: 61  LFSRILHVSSLTDFEYALRVFDQIDSPNSFMWNTLIGACARSLDRKKQAIELFYRMLEEG 120

Query: 121 SVEPDKHTFPFLLKACAYVFALSEGKQAHAHIVKLGLDSDVYVGNSLIHLYASCGCLNFA 180
           SVEPDKHTFPFLLKACAYVFALSEG+QAHAHIVK GLDSDVYVGNSLIHLYASCGCL+ A
Sbjct: 121 SVEPDKHTFPFLLKACAYVFALSEGRQAHAHIVKRGLDSDVYVGNSLIHLYASCGCLSLA 180

Query: 181 LKLFEKMPKRSLVSWNVTIDAFVQCGLFENALKLFVEMQDVFEPDGYTMQSVISACAGIG 240
           LK+FE+MP RSLVSWNV IDA+VQ GLFENALKLF EMQD FEPDGYTMQS+ISACAGIG
Sbjct: 181 LKVFEQMPHRSLVSWNVMIDAYVQRGLFENALKLFAEMQDTFEPDGYTMQSIISACAGIG 240

Query: 241 ALSLGMWAHAYVLRKAGGAMSAD 263
           ALSLGMW+HAYVLR+ GGAM+ +
Sbjct: 241 ALSLGMWSHAYVLRRTGGAMAGE 263

BLAST of MC09g_new0473 vs. ExPASy TrEMBL
Match: A0A0A0KTV7 (DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G604120 PE=3 SV=1)

HSP 1 Score: 448 bits (1152), Expect = 1.62e-152
Identity = 217/263 (82.51%), Postives = 240/263 (91.25%), Query Frame = 0

Query: 1   MLLAIPPIAQSIAVEFKHDTFRTHQSRLLQLLSHCTDLSQLKKIHARALRSFSTHESSLF 60
           MLLAIP  +QS+ +E K +  +THQSR L LL+ CTDLS+LK+IHA+A+R+FSTH SSLF
Sbjct: 1   MLLAIPTNSQSLPIEIKGENSKTHQSRFLHLLTDCTDLSKLKQIHAQAIRNFSTHNSSLF 60

Query: 61  LFSRILHVSSLIDFDYACRVFDRIDNPNSFMWNTLIGACARSFDRKEQAILLFYRMLEEG 120
           L+SRILHVSSLIDFDYACRVF++IDNPNSFMWNTLIGACARS DRKEQAI +FYRMLEEG
Sbjct: 61  LYSRILHVSSLIDFDYACRVFNQIDNPNSFMWNTLIGACARSLDRKEQAIEIFYRMLEEG 120

Query: 121 SVEPDKHTFPFLLKACAYVFALSEGKQAHAHIVKLGLDSDVYVGNSLIHLYASCGCLNFA 180
           SVEPDKHTFPFLLKACAYVFALSEG+QAHA I KLGLD DVYVGNSLIHLYASCGCL+ A
Sbjct: 121 SVEPDKHTFPFLLKACAYVFALSEGRQAHAQIFKLGLDLDVYVGNSLIHLYASCGCLSMA 180

Query: 181 LKLFEKMPKRSLVSWNVTIDAFVQCGLFENALKLFVEMQDVFEPDGYTMQSVISACAGIG 240
           LK+FEKMP RSLVSWNV IDA+VQ GLFENALKLFVEMQ+ FEPDGYTMQS++SACAGIG
Sbjct: 181 LKVFEKMPLRSLVSWNVMIDAYVQSGLFENALKLFVEMQNSFEPDGYTMQSIVSACAGIG 240

Query: 241 ALSLGMWAHAYVLRKAGGAMSAD 263
           ALSLGMWAHAYVLRKA GAM+ D
Sbjct: 241 ALSLGMWAHAYVLRKASGAMAGD 263

BLAST of MC09g_new0473 vs. TAIR 10
Match: AT1G59720.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 294.7 bits (753), Expect = 7.8e-80
Identity = 147/261 (56.32%), Postives = 186/261 (71.26%), Query Frame = 0

Query: 5   IPPIAQSIAVEFKHDTFRTHQSRLLQLLSHCTDLSQLKKIHARALR-SFSTHESSLFLFS 64
           IPP +   A      T   H  R+  L   C+D+SQLK++HA  LR ++    ++LFL+ 
Sbjct: 33  IPPASSPSA-----STAGNHHQRIFSLAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYG 92

Query: 65  RILHV-SSLIDFDYACRVFDRIDNPNSFMWNTLIGACARSFDRKEQAILLFYRMLEEGSV 124
           +IL + SS  D +YA RVFD I+N +SFMWNTLI ACA    RKE+A +L+ +MLE G  
Sbjct: 93  KILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGES 152

Query: 125 EPDKHTFPFLLKACAYVFALSEGKQAHAHIVKLGLDSDVYVGNSLIHLYASCGCLNFALK 184
            PDKHTFPF+LKACAY+F  SEGKQ H  IVK G   DVYV N LIHLY SCGCL+ A K
Sbjct: 153 SPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARK 212

Query: 185 LFEKMPKRSLVSWNVTIDAFVQCGLFENALKLFVEMQDVFEPDGYTMQSVISACAGIGAL 244
           +F++MP+RSLVSWN  IDA V+ G +++AL+LF EMQ  FEPDGYTMQSV+SACAG+G+L
Sbjct: 213 VFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRSFEPDGYTMQSVLSACAGLGSL 272

Query: 245 SLGMWAHAYVLRKAGGAMSAD 264
           SLG WAHA++LRK    ++ D
Sbjct: 273 SLGTWAHAFLLRKCDVDVAMD 288

BLAST of MC09g_new0473 vs. TAIR 10
Match: AT4G21065.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 163.3 bits (412), Expect = 2.7e-40
Identity = 90/224 (40.18%), Postives = 136/224 (60.71%), Query Frame = 0

Query: 36  TDLSQLKKIHARALR---SFSTHESSLFLFSRILHVSSLIDFDYACRVFDRIDNP-NSFM 95
           + +++L++IHA ++R   S S  E    L   ++ + S     YA +VF +I+ P N F+
Sbjct: 28  SSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFI 87

Query: 96  WNTLIGACARSFDRKEQAILLFYRMLEEGSVEPDKHTFPFLLKACAYVFALSEGKQAHAH 155
           WNTLI   A        A  L+  M   G VEPD HT+PFL+KA   +  +  G+  H+ 
Sbjct: 88  WNTLIRGYA-EIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSV 147

Query: 156 IVKLGLDSDVYVGNSLIHLYASCGCLNFALKLFEKMPKRSLVSWNVTIDAFVQCGLFENA 215
           +++ G  S +YV NSL+HLYA+CG +  A K+F+KMP++ LV+WN  I+ F + G  E A
Sbjct: 148 VIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEA 207

Query: 216 LKLFVEMQDV-FEPDGYTMQSVISACAGIGALSLGMWAHAYVLR 255
           L L+ EM     +PDG+T+ S++SACA IGAL+LG   H Y+++
Sbjct: 208 LALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIK 250

BLAST of MC09g_new0473 vs. TAIR 10
Match: AT2G29760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 162.2 bits (409), Expect = 6.1e-40
Identity = 99/236 (41.95%), Postives = 136/236 (57.63%), Query Frame = 0

Query: 20  TFRTHQSRLLQLLSHCTDLSQLKKIHARALR--SFSTHESSLFLFSRILHVSSLIDFDYA 79
           T    +SR + L+  C  L QLK+ H   +R  +FS   S+  LF+ +  +SS    +YA
Sbjct: 25  TTNNERSRHISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFA-MAALSSFASLEYA 84

Query: 80  CRVFDRIDNPNSFMWNTLIGACARSFDRKEQAILLFYRMLEEGSVEPDKHTFPFLLKACA 139
            +VFD I  PNSF WNTLI A A   D    +I  F  M+ E    P+K+TFPFL+KA A
Sbjct: 85  RKVFDEIPKPNSFAWNTLIRAYASGPD-PVLSIWAFLDMVSESQCYPNKYTFPFLIKAAA 144

Query: 140 YVFALSEGKQAHAHIVKLGLDSDVYVGNSLIHLYASCGCLNFALKLFEKMPKRSLVSWNV 199
            V +LS G+  H   VK  + SDV+V NSLIH Y SCG L+ A K+F  + ++ +VSWN 
Sbjct: 145 EVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNS 204

Query: 200 TIDAFVQCGLFENALKLFVEMQ-DVFEPDGYTMQSVISACAGIGALSLGMWAHAYV 253
            I+ FVQ G  + AL+LF +M+ +  +    TM  V+SACA I  L  G    +Y+
Sbjct: 205 MINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYI 258

BLAST of MC09g_new0473 vs. TAIR 10
Match: AT2G42920.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 151.4 bits (381), Expect = 1.1e-36
Identity = 90/257 (35.02%), Postives = 142/257 (55.25%), Query Frame = 0

Query: 33  SHCTDLSQLKKIHARALRSFSTHESSLFLFSRILH--VSSLIDFDYACRVFDRIDNPNSF 92
           + C+ + +LK+IHA  +++     S     SR+L    +S  D +YA  VF RI++ N F
Sbjct: 33  TQCSTMRELKQIHASLIKTGLI--SDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPF 92

Query: 93  MWNTLIGACARSFDRKEQAILLFYRML-EEGSVEPDKHTFPFLLKACAYVFALSEGKQAH 152
           +WNT+I   +RS    E AI +F  ML    SV+P + T+P + KA   +    +G+Q H
Sbjct: 93  VWNTIIRGFSRS-SFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLH 152

Query: 153 AHIVKLGLDSDVYVGNSLIHLYASCGCL-------------------------------N 212
             ++K GL+ D ++ N+++H+Y +CGCL                               +
Sbjct: 153 GMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLID 212

Query: 213 FALKLFEKMPKRSLVSWNVTIDAFVQCGLFENALKLFVEMQDV-FEPDGYTMQSVISACA 255
            A  LF++MP+R+ VSWN  I  FV+ G F++AL +F EMQ+   +PDG+TM S+++ACA
Sbjct: 213 QAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACA 272

BLAST of MC09g_new0473 vs. TAIR 10
Match: AT1G31920.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 143.3 bits (360), Expect = 2.9e-34
Identity = 80/241 (33.20%), Postives = 134/241 (55.60%), Query Frame = 0

Query: 19  DTFRTHQSRLLQLLSHCTDLSQLKKIHARALR---SFSTHESSLFLFSRILHVSSLIDFD 78
           + F   +   L LL  C ++ + K++HAR ++    +S+  S+  + ++  H       +
Sbjct: 24  NNFGGKEQECLYLLKRCHNIDEFKQVHARFIKLSLFYSSSFSASSVLAKCAHSGWENSMN 83

Query: 79  YACRVFDRIDNPNSFMWNTLIGACARSFDRKEQAILLFYRMLEEGSVEPDKHTFPFLLKA 138
           YA  +F  ID+P +F +NT+I          E+A+  +  M++ G+ EPD  T+P LLKA
Sbjct: 84  YAASIFRGIDDPCTFDFNTMIRGYVNVMS-FEEALCFYNEMMQRGN-EPDNFTYPCLLKA 143

Query: 139 CAYVFALSEGKQAHAHIVKLGLDSDVYVGNSLIHLYASCGCLNFALKLFEKMPKRSLVSW 198
           C  + ++ EGKQ H  + KLGL++DV+V NSLI++Y  CG +  +  +FEK+  ++  SW
Sbjct: 144 CTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASW 203

Query: 199 NVTIDAFVQCGLFENALKLFVEM--QDVFEPDGYTMQSVISACAGIGALSLGMWAHAYVL 255
           +  + A    G++   L LF  M  +   + +   M S + ACA  GAL+LGM  H ++L
Sbjct: 204 SSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLL 262

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q0WQW51.1e-7856.32Pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondri... [more]
A8MQA33.8e-3940.18Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana OX... [more]
O823808.6e-3941.95Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop... [more]
Q9SJG61.5e-3535.02Pentatricopeptide repeat-containing protein At2g42920, chloroplastic OS=Arabidop... [more]
Q9C6T24.1e-3333.20Pentatricopeptide repeat-containing protein At1g31920 OS=Arabidopsis thaliana OX... [more]
Match NameE-valueIdentityDescription
XP_022151200.11.55e-185100.00pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondri... [more]
XP_008446291.11.02e-15784.79PREDICTED: pentatricopeptide repeat-containing protein At1g59720, chloroplastic/... [more]
XP_038892628.15.52e-15684.41pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondri... [more]
XP_023537748.17.82e-15684.41pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondri... [more]
XP_022957211.18.97e-15584.03pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondri... [more]
Match NameE-valueIdentityDescription
A0A6J1DAJ27.51e-186100.00pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondri... [more]
A0A1S3BE784.93e-15884.79pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondri... [more]
A0A6J1GYL54.34e-15584.03pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondri... [more]
A0A6J1KA082.01e-15383.27pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondri... [more]
A0A0A0KTV71.62e-15282.51DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G6041... [more]
Match NameE-valueIdentityDescription
AT1G59720.17.8e-8056.32Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT4G21065.12.7e-4040.18Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT2G29760.16.1e-4041.95Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT2G42920.11.1e-3635.02Pentatricopeptide repeat (PPR-like) superfamily protein [more]
AT1G31920.12.9e-3433.20Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 165..190
e-value: 9.9E-5
score: 22.3
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 87..137
e-value: 3.9E-7
score: 30.2
coord: 192..237
e-value: 1.1E-7
score: 32.0
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 193..220
e-value: 0.0015
score: 16.6
coord: 91..125
e-value: 0.0022
score: 16.0
coord: 165..193
e-value: 0.0023
score: 16.0
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 160..194
score: 9.317163
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 88..123
score: 9.492543
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 23..139
e-value: 2.7E-11
score: 45.5
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 140..243
e-value: 7.2E-22
score: 79.6
NoneNo IPR availablePANTHERPTHR47925OS01G0913400 PROTEIN-RELATEDcoord: 21..263
NoneNo IPR availablePANTHERPTHR47925:SF96BNAC04G18690D PROTEINcoord: 21..263

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC09g_new0473.1MC09g_new0473.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding