MC09g_new0443 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC09g_new0443
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	cytochrome P450 71A14-like
Location	MC09: 21384612 .. 21384884 (+)
RNA-Seq Expression	MC09g_new0443
Synteny	MC09g_new0443

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGCATGCAAACGTCGGCCGGAGACGAAGGCAAGCAGAAACGCCCGGAGAATAAGAACCGACGGAAATCTCTTTTCGAAGGCGGCCAGAGATGGAATGCTCCTGCAACAAAGAAAATCGGAGTCGATCGAAGAGGACAACAGACGGTCGGAGAAGAGGAACGGACGATCAGAGAAGAGGAAGGGATGGTTGGAGGAAGGAAAACCGACGGTTGGAGGAAGAAAAGAAAAAACGATGAAGAAGAAAGGGGTGGGTTTCGAAAATGGATGA

mRNA sequence

ATGAAGGCATGCAAACGTCGGCCGGAGACGAAGGCAAGCAGAAACGCCCGGAGAATAAGAACCGACGGAAATCTCTTTTCGAAGGCGGCCAGAGATGGAATGCTCCTGCAACAAAGAAAATCGGAGTCGATCGAAGAGGACAACAGACGGTCGGAGAAGAGGAACGGACGATCAGAGAAGAGGAAGGGATGGTTGGAGGAAGGAAAACCGACGGTTGGAGGAAGAAAAGAAAAAACGATGAAGAAGAAAGGGGTGGGTTTCGAAAATGGATGA

Coding sequence (CDS)

ATGAAGGCATGCAAACGTCGGCCGGAGACGAAGGCAAGCAGAAACGCCCGGAGAATAAGAACCGACGGAAATCTCTTTTCGAAGGCGGCCAGAGATGGAATGCTCCTGCAACAAAGAAAATCGGAGTCGATCGAAGAGGACAACAGACGGTCGGAGAAGAGGAACGGACGATCAGAGAAGAGGAAGGGATGGTTGGAGGAAGGAAAACCGACGGTTGGAGGAAGAAAAGAAAAAACGATGAAGAAGAAAGGGGTGGGTTTCGAAAATGGATGA

Protein sequence

MKACKRRPETKASRNARRIRTDGNLFSKAARDGMLLQQRKSESIEEDNRRSEKRNGRSEKRKGWLEEGKPTVGGRKEKTMKKKGVGFENG

Homology

[Close]

BLAST of MC09g_new0443 vs. NCBI nr
Match: XP_022148552.1 (cytochrome P450 71A14-like [Momordica charantia])

HSP 1 Score: 63.5 bits (153), Expect = 3.61e-10
Identity = 45/90 (50.00%), Postives = 59/90 (65.56%), Query Frame = 0


Query: 1  MKACKRRPETKASRNARRIRTDGNLFSKAARDGMLLQQRKSESIEEDNRRSEKRNGRSEK 60
          MKA + RPE KA RN +RIRTDGNL SKAARD MLL+QRK+ES EE++R  ++R  R E+
Sbjct: 15 MKAGRCRPEKKAFRNDQRIRTDGNLLSKAARDEMLLRQRKAESAEEEDR--QRRTVREEE 74

Query: 61 RKGWLEEGKPTVGGRKEKTMKKKGVGFENG 90
             W   G+   G RK++  +   + F  G
Sbjct: 75 ---WRVGGRKIDGRRKKRKTRNGFMPFGGG 99

[Close]

BLAST of MC09g_new0443 vs. ExPASy TrEMBL
Match: A0A6J1D5D3 (cytochrome P450 71A14-like OS=Momordica charantia OX=3673 GN=LOC111017184 PE=3 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 1.75e-10
Identity = 45/90 (50.00%), Postives = 59/90 (65.56%), Query Frame = 0


Query: 1  MKACKRRPETKASRNARRIRTDGNLFSKAARDGMLLQQRKSESIEEDNRRSEKRNGRSEK 60
          MKA + RPE KA RN +RIRTDGNL SKAARD MLL+QRK+ES EE++R  ++R  R E+
Sbjct: 15 MKAGRCRPEKKAFRNDQRIRTDGNLLSKAARDEMLLRQRKAESAEEEDR--QRRTVREEE 74

Query: 61 RKGWLEEGKPTVGGRKEKTMKKKGVGFENG 90
             W   G+   G RK++  +   + F  G
Sbjct: 75 ---WRVGGRKIDGRRKKRKTRNGFMPFGGG 99

The following BLAST results are available for this feature:

BLAST of MC09g_new0443 vs.


Match Name	E-value	Identity	Description

BLAST of MC09g_new0443 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022148552.1	3.61e-10	50.00	cytochrome P450 71A14-like [Momordica charantia]	[more]

BLAST of MC09g_new0443 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D5D3	1.75e-10	50.00	cytochrome P450 71A14-like OS=Momordica charantia OX=3673 GN=LOC111017184 PE=3 S...	[more]

BLAST of MC09g_new0443 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..90
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..18
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 38..90

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC09g_new0443.1	MC09g_new0443.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005488	binding
molecular_function	GO:0016491	oxidoreductase activity