MC09g_new0428 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC09g_new0428
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionglycine-rich cell wall structural protein 2-like
LocationMC09: 20027567 .. 20029027 (+)
RNA-Seq ExpressionMC09g_new0428
SyntenyMC09g_new0428
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGATAAAATGGGATGAAGGGAGAGAAGTAGAAAGAGAAAGAGCAATGTGAATATGTGTGCTTGATCACATTCACCAACTCCACTAAATCAAACTTGTGACAAAGAAGCAACTAGAAATTGGAAAATTCAGTTTCAAAACGTAACCCCAATTCCCCAATGCCTATAAATAAGGCACTCAAAATCCCACCATTTCCAATGCACTACAACTACAACTATAATACTTTCCCTTTTCTCCTGTATTCTTACATAAAAAGCCTACGCCCAGCGCTGCTTTTTGGTACAATTACAGGCATCAATGGGCAGCAGTAGCACCAGGGCGATTGGTTTGGTGGTCTTGGTTTTGTTAATGGTGGACTTAACTCTTGCCGCTAGATCTCTTAGGGGCTATGGAGGCGGTACTGGCGGCGGAGGAGGGGGTGGTGAAGGCTTCGGACCCTCAGGTTCCGGGTATGGTTCCGGGTATGGATCGGGCTATGGTTCAGGATTTGGAGATGAAGCCTATGAGCCATATGAGCCCTACGGTCCGTATGGCCCATATGGAAGTGGTGGTGGTGGGGGTGGCGGAGGAGGCGGCGGCGGAGGTGGAGGTGCAACCGGGGCTGGGTACGGTCGTGGGTTTGGGTCTGGGTACGGGTCTGGTGGTGGGATAGGACGTGGGGGAGGAGGTGGTGGTGGAGGTGGCAGAGGTGGAGGAGGAGGTGGAGGCTCGGGAACTGGAAGTGGGTCGGGATATGGCTCAGGGTACGGAAGTGGGGGAGGTTATGGAAACGGAAGGGGTAGGGGCGGTGGTGGCGGTGGCGGTGGCGGTGGCGGAGGAGGAGGAGGCGGCGGAGGAGGAATGGGTGGAGGATCTGGATATGGATCTGGATATGGGTCAGGTTATGGGTCGGGATATGGAGGAGGCACGAATGAAGAATCACCATGAACATAATATAATATATGAATAATATTTAGGTGATGGTTAATGAGTAGTATCTCCTATTTATCACCGTTAAAAAATTGACTGCTAAAAAATTGATAGCTAAAAAATGAATGCATCAAAGAAAGAAGATAGAAGATAGAATAAATAGTTGTCAATTGTTTCATAGCGGTAAGTATGAGATATCTACTTATTGATAAGCACATAAATACTATTCATAATATAATAGCTAGAATTTATCTCTAGAAGTATTTTGAAATAAAGTGTAATGCAGCGGGAGAGAATATCGGAATAAAAATTTAGTATTTTGTATGATGGTCTAAACTAAAGTATATCTTATCTTTCGGTTATCACCAAATTCTCCATATCATAAATAAATGAATAAAGTGTCATCGATCTTCTTGTCGTTCTAACTTCTAATTTTATTCTCTTATGTCATTTTTTTCTCGTGCCATGTAAATTACAGAAGTGGGAATATATTAATGTTTCTTTAAAAATAAAAAGAAACAATTGACGAATTTGATTTAGTAAAAAAGTGTGG

mRNA sequence

ATGGGCAGCAGTAGCACCAGGGCGATTGGTTTGGTGGTCTTGGTTTTGTTAATGGTGGACTTAACTCTTGCCGCTAGATCTCTTAGGGGCTATGGAGGCGGTACTGGCGGCGGAGGAGGGGGTGGTGAAGGCTTCGGACCCTCAGGTTCCGGGTATGGTTCCGGGTATGGATCGGGCTATGGTTCAGGATTTGGAGATGAAGCCTATGAGCCATATGAGCCCTACGGTCCGTATGGCCCATATGGAAGTGGTGGTGGTGGGGGTGGCGGAGGAGGCGGCGGCGGAGGTGGAGGTGCAACCGGGGCTGGGTACGGTCGTGGGTTTGGGTCTGGGTACGGGTCTGGTGGTGGGATAGGACGTGGGGGAGGAGGTGGTGGTGGAGGTGGCAGAGGTGGAGGAGGAGGTGGAGGCTCGGGAACTGGAAGTGGGTCGGGATATGGCTCAGGGTACGGAAGTGGGGGAGGTTATGGAAACGGAAGGGGTAGGGGCGGTGGTGGCGGTGGCGGTGGCGGTGGCGGAGGAGGAGGAGGCGGCGGAGGAGGAATGGGTGGAGGATCTGGATATGGATCTGGATATGGGTCAGGTTATGGGTCGGGATATGGAGGAGGCACGAATGAAGAATCACCATGA

Coding sequence (CDS)

ATGGGCAGCAGTAGCACCAGGGCGATTGGTTTGGTGGTCTTGGTTTTGTTAATGGTGGACTTAACTCTTGCCGCTAGATCTCTTAGGGGCTATGGAGGCGGTACTGGCGGCGGAGGAGGGGGTGGTGAAGGCTTCGGACCCTCAGGTTCCGGGTATGGTTCCGGGTATGGATCGGGCTATGGTTCAGGATTTGGAGATGAAGCCTATGAGCCATATGAGCCCTACGGTCCGTATGGCCCATATGGAAGTGGTGGTGGTGGGGGTGGCGGAGGAGGCGGCGGCGGAGGTGGAGGTGCAACCGGGGCTGGGTACGGTCGTGGGTTTGGGTCTGGGTACGGGTCTGGTGGTGGGATAGGACGTGGGGGAGGAGGTGGTGGTGGAGGTGGCAGAGGTGGAGGAGGAGGTGGAGGCTCGGGAACTGGAAGTGGGTCGGGATATGGCTCAGGGTACGGAAGTGGGGGAGGTTATGGAAACGGAAGGGGTAGGGGCGGTGGTGGCGGTGGCGGTGGCGGTGGCGGAGGAGGAGGAGGCGGCGGAGGAGGAATGGGTGGAGGATCTGGATATGGATCTGGATATGGGTCAGGTTATGGGTCGGGATATGGAGGAGGCACGAATGAAGAATCACCATGA

Protein sequence

MGSSSTRAIGLVVLVLLMVDLTLAARSLRGYGGGTGGGGGGGEGFGPSGSGYGSGYGSGYGSGFGDEAYEPYEPYGPYGPYGSGGGGGGGGGGGGGGGATGAGYGRGFGSGYGSGGGIGRGGGGGGGGGRGGGGGGGSGTGSGSGYGSGYGSGGGYGNGRGRGGGGGGGGGGGGGGGGGGGMGGGSGYGSGYGSGYGSGYGGGTNEESP
Homology
BLAST of MC09g_new0428 vs. NCBI nr
Match: XP_022139218.1 (putative glycine-rich cell wall structural protein 1 [Momordica charantia])

HSP 1 Score: 226 bits (575), Expect = 7.42e-72
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0

Query: 1   MGSSSTRAIGLVVLVLLMVDLTLAARSLRGYGGGTGGGGGGGEGFGPSGSGYGSGYGSGY 60
           MGSSSTRAIGLVVLVLLMVDLTLAARSLRGYGGGTGGGGGGGEGFGPSGSGYGSGYGSGY
Sbjct: 1   MGSSSTRAIGLVVLVLLMVDLTLAARSLRGYGGGTGGGGGGGEGFGPSGSGYGSGYGSGY 60

Query: 61  GSGFGDEAYEPYEPYGPYGPYGSGGGGGGGGGGGGGGGATGAGYGRGFGSGYGSGGGIGR 120
           GSGFGDEAYEPYEPYGPYGPYGSGGGGGGGGGGGGGGGATGAGYGRGFGSGYGSGGGIGR
Sbjct: 61  GSGFGDEAYEPYEPYGPYGPYGSGGGGGGGGGGGGGGGATGAGYGRGFGSGYGSGGGIGR 120

Query: 121 GGGGGGGGGRGGGGGGGSGTGSGSGYGSGYGSGGGYGNGRGR 162
           GGGGGGGGGRGGGGGGGSGTGSGSGYGSGYGSGGGYGNGRGR
Sbjct: 121 GGGGGGGGGRGGGGGGGSGTGSGSGYGSGYGSGGGYGNGRGR 162

BLAST of MC09g_new0428 vs. NCBI nr
Match: XP_023550088.1 (glycine-rich cell wall structural protein 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 178 bits (451), Expect = 1.55e-52
Identity = 175/208 (84.13%), Postives = 181/208 (87.02%), Query Frame = 0

Query: 4   SSTRAIGLVVLVLLMVDLTLAARSLRGYGGGTGGGGGGGEGFGP-SGSGYGSGYGSGYGS 63
           ++T AIGLV+LVLLM DLTLAAR LRGYGGG+GGGGGGGEG  P SGSGYGSGYGSGYGS
Sbjct: 2   ATTGAIGLVLLVLLMADLTLAARFLRGYGGGSGGGGGGGEGSRPWSGSGYGSGYGSGYGS 61

Query: 64  GFGDEAY-----EPYEPYGPYGPYGSGGGGGGGGGGGGGGG--ATGAGYGRGFGSG---- 123
           G+GD  Y     E Y PYGPYGPYGSGGGGGGGGGGGGGGG  A GAGYG GFGSG    
Sbjct: 62  GYGDGGYPRYGDEGYGPYGPYGPYGSGGGGGGGGGGGGGGGGGANGAGYGHGFGSGSGSG 121

Query: 124 YGSGGGIGRGGGGGGGGGRGGGGGGGSGTGSGSGYGSGYGSGGGYGNGRGRGGGGGGGGG 183
           YGSGGG+GRGGGGGGGGGRGGGGGGGSG GSGSGYGSGYGSGGGYGNG GRGGGGGGGGG
Sbjct: 122 YGSGGGVGRGGGGGGGGGRGGGGGGGSGIGSGSGYGSGYGSGGGYGNGGGRGGGGGGGGG 181

Query: 184 GGGGGGGGGGMGGGSGYGSGYGSGYGSG 199
           GGGGGGGG GMGGGSGYGSGYGSGYG G
Sbjct: 182 GGGGGGGGEGMGGGSGYGSGYGSGYGGG 209

BLAST of MC09g_new0428 vs. NCBI nr
Match: KAG6601193.1 (hypothetical protein SDJN03_06426, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 169 bits (429), Expect = 3.27e-49
Identity = 173/208 (83.17%), Postives = 179/208 (86.06%), Query Frame = 0

Query: 4   SSTRAIGLVVLVLLMVDLTLAARSLRGYGGG----TGGGGGGGEGFGP-SGSGYGSGYGS 63
           ++T  IGLV+LVLLM DLTLAAR LRGYGGG    +GGGGGGGEG  P SGSGYGSGYGS
Sbjct: 2   ATTGTIGLVLLVLLMADLTLAARFLRGYGGGGGGGSGGGGGGGEGSRPWSGSGYGSGYGS 61

Query: 64  GYGSGFGDEAYEPY--EPYGPYGPYGSGGGGGGGGGGGGGGG-ATGAGYGRGFGSG---- 123
           GYGSG+GD  Y  Y  E YGPYGPYGSGGGGGGGGGGGGGGG A GAGYG GFGSG    
Sbjct: 62  GYGSGYGDGGYPRYGDEEYGPYGPYGSGGGGGGGGGGGGGGGGANGAGYGHGFGSGSGSG 121

Query: 124 YGSGGGIGRGGGGGGGGGRGGGGGGGSGTGSGSGYGSGYGSGGGYGNGRGRGGGGGGGGG 183
           YGSGGG+GRGGGGGGGGGRGGGGGGGSG GSGSGYGSGYGSGGGYGNG GRGGGGGGGGG
Sbjct: 122 YGSGGGVGRGGGGGGGGGRGGGGGGGSGIGSGSGYGSGYGSGGGYGNGGGRGGGGGGGGG 181

Query: 184 GGGGGGGGGGMGGGSGYGSGYGSGYGSG 199
           GGGGGGGG GMGGGSGYGSGYGSGYG G
Sbjct: 182 GGGGGGGGEGMGGGSGYGSGYGSGYGGG 209

BLAST of MC09g_new0428 vs. NCBI nr
Match: XP_031741764.1 (glycine-rich cell wall structural protein 2 [Cucumis sativus])

HSP 1 Score: 159 bits (402), Expect = 3.06e-45
Identity = 160/215 (74.42%), Postives = 171/215 (79.53%), Query Frame = 0

Query: 4   SSTRAIGLVVLVLLMVDLTLAARSLRGYGGGTGGGGGGGEGFGP-SGSGYGSGYGSGYGS 63
           ++T+A GLV+LVLLM+DL LAAR  RGYGGG+GGGGGGGEG GP SGSGYGSGYGSGYGS
Sbjct: 2   ATTKAAGLVILVLLMLDLALAARFFRGYGGGSGGGGGGGEGSGPWSGSGYGSGYGSGYGS 61

Query: 64  GFG-DEAYEPYEP---YGPYGPYGSGGGGGGGGGGGGGGGATGAGYGRGFG----SGYGS 123
           G+G +E Y  Y     YGPYGPY  GGGGGGGGGGGGGG A GA YGRGFG    SGYGS
Sbjct: 62  GYGGEEGYSRYGDEGRYGPYGPYSGGGGGGGGGGGGGGGSAIGAEYGRGFGAGSGSGYGS 121

Query: 124 GGGIGRGGGGGGGGGRGGGGGGGSGTGSGSGYGSGYGSGGGYGNGRGRGGGGGGGGGGGG 183
           GGG+GRGGGGGGG   GGGGGGGSG GSGSGYGSGYGSGGGYG+G GRGG          
Sbjct: 122 GGGVGRGGGGGGG--SGGGGGGGSGIGSGSGYGSGYGSGGGYGSGGGRGG---------- 181

Query: 184 GGGGGGGMGGGSGYGSGYGSGYGSGYGGGTNEESP 209
            GGGGGG GGG G GSGYGSGYGSGYGGG +EESP
Sbjct: 182 -GGGGGGGGGGGGGGSGYGSGYGSGYGGGGDEESP 203

BLAST of MC09g_new0428 vs. NCBI nr
Match: XP_022990525.1 (putative glycine-rich cell wall structural protein 1 [Cucurbita maxima])

HSP 1 Score: 159 bits (402), Expect = 3.55e-45
Identity = 169/206 (82.04%), Postives = 177/206 (85.92%), Query Frame = 0

Query: 4   SSTRAIGLVVLVLLMVDLTLAARSLRGYGGG----TGGGGGGGEGFGP-SGSGYGSGYGS 63
           ++  AIGLV+LVLLM DLTLAAR LRGYGGG    +GGGGGGGEG  P SGSGYGSGYGS
Sbjct: 2   ATNGAIGLVLLVLLMADLTLAARFLRGYGGGGGGGSGGGGGGGEGSRPWSGSGYGSGYGS 61

Query: 64  GYGSGFGDEAYEPYEPYGPYGPYGSGGGGGGGGGGGGGGG-ATGAGYGRGFGSG----YG 123
           GYGSG+GD  Y  Y   G YGPYGSGGGGGGGGGGGGGGG A GAGYG+GFGSG    YG
Sbjct: 62  GYGSGYGDGGYPRYGDEG-YGPYGSGGGGGGGGGGGGGGGSANGAGYGQGFGSGSGSGYG 121

Query: 124 SGGGIGRGGGGGGGGGRGGGGGGGSGTGSGSGYGSGYGSGGGYGNGRGRGGGGGGGGGGG 183
           SGGG+GRGGGGGGGGGRGGGGGGGSG GSGSGYGSGYGSGGGYG+G GRGGGGGGGGGGG
Sbjct: 122 SGGGVGRGGGGGGGGGRGGGGGGGSGIGSGSGYGSGYGSGGGYGSGGGRGGGGGGGGGGG 181

Query: 184 GGGGGGGGMGGGSGYGSGYGSGYGSG 199
           GGGGGG GMGGGSGYGSGYGSGYG G
Sbjct: 182 GGGGGGEGMGGGSGYGSGYGSGYGGG 206

BLAST of MC09g_new0428 vs. ExPASy TrEMBL
Match: A0A6J1CF67 (putative glycine-rich cell wall structural protein 1 OS=Momordica charantia OX=3673 GN=LOC111010186 PE=4 SV=1)

HSP 1 Score: 226 bits (575), Expect = 3.59e-72
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0

Query: 1   MGSSSTRAIGLVVLVLLMVDLTLAARSLRGYGGGTGGGGGGGEGFGPSGSGYGSGYGSGY 60
           MGSSSTRAIGLVVLVLLMVDLTLAARSLRGYGGGTGGGGGGGEGFGPSGSGYGSGYGSGY
Sbjct: 1   MGSSSTRAIGLVVLVLLMVDLTLAARSLRGYGGGTGGGGGGGEGFGPSGSGYGSGYGSGY 60

Query: 61  GSGFGDEAYEPYEPYGPYGPYGSGGGGGGGGGGGGGGGATGAGYGRGFGSGYGSGGGIGR 120
           GSGFGDEAYEPYEPYGPYGPYGSGGGGGGGGGGGGGGGATGAGYGRGFGSGYGSGGGIGR
Sbjct: 61  GSGFGDEAYEPYEPYGPYGPYGSGGGGGGGGGGGGGGGATGAGYGRGFGSGYGSGGGIGR 120

Query: 121 GGGGGGGGGRGGGGGGGSGTGSGSGYGSGYGSGGGYGNGRGR 162
           GGGGGGGGGRGGGGGGGSGTGSGSGYGSGYGSGGGYGNGRGR
Sbjct: 121 GGGGGGGGGRGGGGGGGSGTGSGSGYGSGYGSGGGYGNGRGR 162

BLAST of MC09g_new0428 vs. ExPASy TrEMBL
Match: A0A6J1JQB8 (putative glycine-rich cell wall structural protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111487374 PE=4 SV=1)

HSP 1 Score: 159 bits (402), Expect = 1.72e-45
Identity = 169/206 (82.04%), Postives = 177/206 (85.92%), Query Frame = 0

Query: 4   SSTRAIGLVVLVLLMVDLTLAARSLRGYGGG----TGGGGGGGEGFGP-SGSGYGSGYGS 63
           ++  AIGLV+LVLLM DLTLAAR LRGYGGG    +GGGGGGGEG  P SGSGYGSGYGS
Sbjct: 2   ATNGAIGLVLLVLLMADLTLAARFLRGYGGGGGGGSGGGGGGGEGSRPWSGSGYGSGYGS 61

Query: 64  GYGSGFGDEAYEPYEPYGPYGPYGSGGGGGGGGGGGGGGG-ATGAGYGRGFGSG----YG 123
           GYGSG+GD  Y  Y   G YGPYGSGGGGGGGGGGGGGGG A GAGYG+GFGSG    YG
Sbjct: 62  GYGSGYGDGGYPRYGDEG-YGPYGSGGGGGGGGGGGGGGGSANGAGYGQGFGSGSGSGYG 121

Query: 124 SGGGIGRGGGGGGGGGRGGGGGGGSGTGSGSGYGSGYGSGGGYGNGRGRGGGGGGGGGGG 183
           SGGG+GRGGGGGGGGGRGGGGGGGSG GSGSGYGSGYGSGGGYG+G GRGGGGGGGGGGG
Sbjct: 122 SGGGVGRGGGGGGGGGRGGGGGGGSGIGSGSGYGSGYGSGGGYGSGGGRGGGGGGGGGGG 181

Query: 184 GGGGGGGGMGGGSGYGSGYGSGYGSG 199
           GGGGGG GMGGGSGYGSGYGSGYG G
Sbjct: 182 GGGGGGEGMGGGSGYGSGYGSGYGGG 206

BLAST of MC09g_new0428 vs. ExPASy TrEMBL
Match: A0A0A0KUV7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G622440 PE=4 SV=1)

HSP 1 Score: 158 bits (400), Expect = 2.80e-45
Identity = 158/215 (73.49%), Postives = 169/215 (78.60%), Query Frame = 0

Query: 4   SSTRAIGLVVLVLLMVDLTLAARSLRGYGGGTGGGGGGGEGFGP-SGSGYGSGYGSGYGS 63
           ++T+A GLV+LVLLM+DL LAAR  RGYGGG+GGGGGGGEG GP SGSGYGSGYGSGYGS
Sbjct: 2   ATTKAAGLVILVLLMLDLALAARFFRGYGGGSGGGGGGGEGSGPWSGSGYGSGYGSGYGS 61

Query: 64  GFG-DEAYEPYEP---YGPYGPYGSGGGGGGGGGGGGGGGATGAGYGRGFG----SGYGS 123
           G+G +E Y  Y     YGPYGPY  GGGGGGGGGGGGGG A GA YGRGFG    SGYGS
Sbjct: 62  GYGGEEGYSRYGDEGRYGPYGPYSGGGGGGGGGGGGGGGSAIGAEYGRGFGAGSGSGYGS 121

Query: 124 GGGIGRGGGGGGGGGRGGGGGGGSGTGSGSGYGSGYGSGGGYGNGRGRGGGGGGGGGGGG 183
           GGG+GRGGGGGGG   GGGGGGGSG GSGSGYGSGYGSGGGYG+G GR            
Sbjct: 122 GGGVGRGGGGGGG--SGGGGGGGSGIGSGSGYGSGYGSGGGYGSGGGR------------ 181

Query: 184 GGGGGGGMGGGSGYGSGYGSGYGSGYGGGTNEESP 209
            GGGGGG GGG G GSGYGSGYGSGYGGG +EESP
Sbjct: 182 -GGGGGGGGGGGGGGSGYGSGYGSGYGGGGDEESP 201

BLAST of MC09g_new0428 vs. ExPASy TrEMBL
Match: A0A1S3BGF1 (glycine-rich cell wall structural protein 2-like OS=Cucumis melo OX=3656 GN=LOC103489565 PE=4 SV=1)

HSP 1 Score: 150 bits (378), Expect = 8.45e-42
Identity = 167/219 (76.26%), Postives = 178/219 (81.28%), Query Frame = 0

Query: 4   SSTRAIGLVVLVLLMVDLTLAARSLRGYGGG----TGGGGGGGEGFGPS--GSGYGSGYG 63
           ++T+A+G VVLVLLM+DL LAAR  RGYGGG    +GGGGGGGEG G    GSGYGSGYG
Sbjct: 2   ATTKAVGFVVLVLLMLDLALAARFFRGYGGGGGGGSGGGGGGGEGSGGPWPGSGYGSGYG 61

Query: 64  SGYGSGFG-DEAYEPY--EPYGPYGPYGSGGGGGGGGGGGGGGGATGAGYGRGFG----S 123
           SGYGSG+G +E Y  Y  E YGPYG Y  GGGGGGGGGGGGGG A GA YGRGFG    S
Sbjct: 62  SGYGSGYGGEEGYSRYGDEGYGPYGRYSGGGGGGGGGGGGGGGSAIGAEYGRGFGMGGGS 121

Query: 124 GYGSGGGIGRGGGGGGGGGRGGGGGGGSGTGSGSGYGSGYGSGGGYGNGRGRGGGGGGGG 183
           GYGSGGG+GRGGGGGGG   GGGGGGGSG GSGSGYGSGYGSGGGYG+G GRGGGGG GG
Sbjct: 122 GYGSGGGVGRGGGGGGG--SGGGGGGGSGVGSGSGYGSGYGSGGGYGSGGGRGGGGGVGG 181

Query: 184 GGGGGGGGGGGMGGGSGYGSGYGSGYGSGYGGGTNEESP 209
           GGGGGGGGGGGMGGGSGYGSGYGSGY    GGG +EESP
Sbjct: 182 GGGGGGGGGGGMGGGSGYGSGYGSGY----GGGGDEESP 214

BLAST of MC09g_new0428 vs. ExPASy TrEMBL
Match: A0A6J1H1H1 (glycine-rich cell wall structural protein 1.0-like OS=Cucurbita moschata OX=3662 GN=LOC111458712 PE=4 SV=1)

HSP 1 Score: 125 bits (313), Expect = 1.07e-32
Identity = 109/140 (77.86%), Postives = 115/140 (82.14%), Query Frame = 0

Query: 4   SSTRAIGLVVLVLLMVDLTLAARSLRGYGGG----TGGGGGGGEGFGP-SGSGYGSGYGS 63
           ++T  IGLV+LVLLM DLTLAAR LRGYGGG    +GGGGGGGEG  P SGSGYGSGYGS
Sbjct: 2   ATTGTIGLVLLVLLMADLTLAARFLRGYGGGGGGGSGGGGGGGEGSRPWSGSGYGSGYGS 61

Query: 64  GYGSGFGDEAYEPY--EPYGPYGPYGSGGGGGGGGGGGGGGG-ATGAGYGRGFGSG---- 123
           GYGSG+GD  Y  Y  E YGPYGPYGSGGGGGGGGGGGGGGG A GAGYG GFGSG    
Sbjct: 62  GYGSGYGDGGYPRYGDEGYGPYGPYGSGGGGGGGGGGGGGGGGANGAGYGHGFGSGSGSG 121

Query: 124 YGSGGGIGRGGGGGGGGGRG 131
           YGSGGG+GRGGGGGGGGGRG
Sbjct: 122 YGSGGGVGRGGGGGGGGGRG 141

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_022139218.17.42e-72100.00putative glycine-rich cell wall structural protein 1 [Momordica charantia][more]
XP_023550088.11.55e-5284.13glycine-rich cell wall structural protein 2-like [Cucurbita pepo subsp. pepo][more]
KAG6601193.13.27e-4983.17hypothetical protein SDJN03_06426, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_031741764.13.06e-4574.42glycine-rich cell wall structural protein 2 [Cucumis sativus][more]
XP_022990525.13.55e-4582.04putative glycine-rich cell wall structural protein 1 [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
A0A6J1CF673.59e-72100.00putative glycine-rich cell wall structural protein 1 OS=Momordica charantia OX=3... [more]
A0A6J1JQB81.72e-4582.04putative glycine-rich cell wall structural protein 1 OS=Cucurbita maxima OX=3661... [more]
A0A0A0KUV72.80e-4573.49Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G622440 PE=4 SV=1[more]
A0A1S3BGF18.45e-4276.26glycine-rich cell wall structural protein 2-like OS=Cucumis melo OX=3656 GN=LOC1... [more]
A0A6J1H1H11.07e-3277.86glycine-rich cell wall structural protein 1.0-like OS=Cucurbita moschata OX=3662... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR01228EGGSHELLcoord: 113..128
score: 51.56
coord: 48..59
score: 43.75
coord: 139..149
score: 29.55
coord: 164..182
score: 45.39
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 157..180
NoneNo IPR availablePANTHERPTHR37612FIBROIN HEAVY CHAIN FIB-H LIKE PROTEINcoord: 5..205
NoneNo IPR availablePANTHERPTHR37612:SF6FIBROIN HEAVY CHAIN FIB-H LIKE PROTEINcoord: 5..205

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC09g_new0428.1MC09g_new0428.1mRNA