MC09g_new0387 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC09g_new0387
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	protein RDM16 isoform X2
Location	MC09: 18295179 .. 18301246 (+)
RNA-Seq Expression	MC09g_new0387
Synteny	MC09g_new0387

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCTGCCCGGATGAACTCTCTTACTCTCTGGAGTAGATAGAGAGCGAAACCCTAGAGAGAGAGAGAGAGAGAGAGAGGACGAAGGCGGGAAAACATTCGGTTCAGAGCCTGTGGAACCCTTGGAAATGGATAGGGTTTCCGAGAAGGAGAAATCCAGCAAGCGTTCTCGAGATGAACGCGATCGAGACCAGAAGCATCGCAGTCGAGACGCCGACGAAAAGCATTCCTCCAAGGATGAGAAGCACCGTGAATCCGATCACCACCATCGCCGGCGTCACCACCGATCGGACCGCGATTCCAAGCGCGAGCGTTCGCATGAGCCGCTAGACCACAAACATAGGCGTGATAGGTCTCCTGACGAGCACGAGAGCTCGCAGGACCACGATTTTAAGCGGGAAAGGTCTTATGATCTTAGGGATGAGAGAGAAAGGAGTAGGGATAGGGATTCGTCTAAGCGAGAGCGGTCGAATGAGCCGAGAGTGGAGAGAGAGGGCAGCAAAGAGCGGGGCAAGCTGCGCGAGGCGAGGCGCGAGCAATCAGATGATGAGTGTGAACGGGAAGGATCGTTTGAGCCAATTCAGAATACTGTGCGTTCGAACAAGAGGAAGGATAGAGGGGGGAGTGAGGATAGGTTTGATGGTGGTGAGAAGAGGGCTAGGGCCTCGGAAGATGGGAAGGATCTAAGGCGGATTGAGGACGGGAAGGAAGTGAACGGAGCTGAGATGGATGAGAAAAAGGAGCGGAGGAGATTTGCTGACGGTGAGAAAGATGATGAAGCAAACTTGAGTGGTAGGGGAAGGAGGGAGAGGAAGCGGTTTGAGGATTGGGTAAACGAAGAGGATAATGGTGGAAATGTTGATGAGAAGCATGCCAATGTGAATAAACACAAGTCTAAGGGAAACGTGGGGGATGGGAAAATTCAGATTGGAGGCACCACCGATGTAAGTTCACTGGGGAATGTAAGTTCTATTTTGCATATGCTGCATTTTATTGTAATGATTTCTTCCTACAATATTGGAATTTGTTTGTAAAACCATTTAATTGTTTATCATCATCATTTACTAAGAAATCGGGTTCTCTCTCATATATGCTTTGCACTGTGCTATACTTTATGTTTCAGTTGGCTATTTAATAAAGTTCCATTTTGTCTTCAAATCGTCAATGGTGAAAGTGTCTCTTGTTTCTAAAAGAAAATTAAATTAAGCAACAAAACGAAGTACATTTGAGGAGGGTTCGAGAGTTCCTCTATCTTTATTAAACATATCAATGTTATGTTTTAAGTGACTCACTTCTGCTGTCTACAGTTGTTTCTTCCCTTAGGCTTAGGTAACTACATGGGCGTGTGTCCATGCTTATATTTCTTCTTACTAATTTCCCCCTCTGAACACGTATAAATTCCCTCTCTATCCTCTTTATTTGATCTTCTCGTGTAAATGTATCTATAGGGAGACCCATCAGATCATAAGAGTAATTGAGTCCTTATCTTGTAGGACTTACAGTAAACTTATATATATATTTTTAATGTGATTGTGTGATCTCTTGGGTTGACATTTCCTTTCTGGGTGGGGGCTTTTTTCTGTTCACAAAAACTCATATCTCTGTGAACAATTGAAGCCTTAGAATTGTCATCGGCAGCATGTTTATTTTAAGCGTTTAGTTTTGGGTAAACTAGGCTTACTATAGTATTATTGTAATGCAATGTGCTGGTTAGATGAGTGTGGGCTCAAGAATTTTATTTGATAAGTTATGCAAATTAAAGCTACACCAGAACAGATTTTCCAAGGTTCAGTGATTATATTTTATTGAAAACAAGAAAAATTAATATTGAAGCAAGGTTTTTTATTAGGTTTTTGGTATATTATGAATTTTTAAAATGTTCTAGCCTTTTAATTTTGAAGTGTGAGTGACTAGTGAGGCTCCGTGTTATTTGATGCTTATTGGATGTAATAGGGGACACATTTTTAAAATTAATTGTCTGGTTTGTAACACTACAGATTCCGTATTGTAATTCTGCGACATTTGTTGTTACCTTGTTCAGATTTATATTGGTATTATGTCTAGATTTATTAATTATACATTATTGATTTTTCTTCCATGATTGTCATGCCTCCTGGCCGTGGCTAGTAGTGGACTTAAGGAACTGACATCATTATATTGCAGGGATCCACGGTGGAACCTATTGATATGTCATCAGCAAGTGTGCCCCAGAGTTTGGTACACCCTAGTCATTCCATTCCTATCAAGGTATCTTCAATTTCTACCACAAATGAAAATAAGGGAGTTAGTATTACCAGATCTCATGAGGTTCATGGAAAATCTAGTACAGATGGGCCATCATCAACTGCTGGGAAAAGTGGAAATCTCTCTCTTGATGCTCTAGCAAAAGCTAAGAAAGCTTTACAGATGCAGAAAGAATTGGCCGAGAAGTTGAAGAAAATTCCCCTGGTATGTTTGAAAGCAACGTTCCTTTGACCCATTTTAGCTATTTTCACCACCCTCTGATGTTTGTTTTACATATATATGTATTCACATATGTTTGTGAGTGTGTATTGGGTATTTCTCTGTGTATCAAGTGTGTATTTGATCTTATAGATGAAGAAAGATGGGGGTTCAAGTTCTGCAAGCAGCTCAGTTGTAAAGTTGGAGGACAAATCTAAACCAGCAGGTGGTGTGTTGGGGCCATCGCCAACTACAAATATTGGCACAACTATTTCTGCTGGGGTAGCATCAAGTTCATCGACCTTACCTGCTGCTACTAATACACATGGCGGTGGTATTAATGTTCCAGCAGGCCTTACCTCTATACCCCATTTTGAAGCTGTCAAACGTGCACAGGAGCTTGCTGCTAGGATGGGATTTCGGCAGGATCCAGAGTTTGCTCCTCTCATAAATTTGTTTCCAGGGAATATAGCAACTGATGTTGCTGTTCCGCAGAAGCCAGTCAAGGCCCCTGTCCTTCGTCTTGATGCACTTGGCAGGGAAATAGATGAACAAGGAAATGTGGTCAATATAACCAAACCAAGCAACCTTAGCACTCTAAAGGTTTGAAATGAACTTATACTCCTTTAAATTTTTATTTTATTTTATTAAATTTTAATGGATTAACCGTGTATGTATTTTTAACTTTGCAGGTTAACATTAACAAACAGAAAAAGGATGCATTTCAGATTCTTAAACCTGAACTTGAGGTGGATCCAGAATCAAACCCTCATTTTGATGAGAGGATGGGTATAAATAAAACTAAACTCTTGAGGCCGAAGAGGATGAATTTCCAATTTGTTGAGGAAGGGAAATGGTCTAAGGAGGCTGAAACCATAAAATTAAGGGTACTTATAGTTTCAATCAAACTTTCTTTTTGTAAAAGAAGGGCTGTCTAATTTATTTTAATTTTCTCATTACAGAGTAAGTTCGGAGAGGCACAAGCCAAAGAGCGAAGGGAGAAGCAGGCACAATTGGCCAAGGCAAAGGCAGCACCTGATATAAACCCGAATTTGATCGAGGTATCAGAGAGAGTTATTGTGAAAGAAAAAACGAAAGAACCAATTCCTGAAATTGAGTGGTGGTAGGTTTTATATCTTTTCTATTCTTATACTTCTGAGTACTTGTTTAGTTTGCCACTTTTGGATCGTGAAAGCAATGGTATGATTGAACGATTTGAACATATTGACTTGGTGAATGCAAAACTTATATTAGATTTTTATCTTAGAAACTTTAGGAACTCAATTAAATTTACATCTTCTCGTTAGGAGGAATACAATATCTTACCCCATCATCAAAAGCCCGAATAGCAACTACATTTGATAACATTTACCGACGACAACCTAAATTCTTTTTAGTACACCAAGAGGCCGCAGAATATTTGATGATCTCTGCTCTTTCCTCCAACTTAGATGTTTATTCTTAATAATCCTGAGACTTCTTAAGTTAAATCCTATAAAGTTTTTCTTAGTAAAAAAAAAAATCCTATAAAGTTGCTTTGACCCCATGTTCCATAATATTTTAGCACTTTGTCGTTGATCTTTTTTTAATTGGAGTGGTTTGTGTGTGTGTGGAAATTTGTTTTCAAGTACGAAGTTCGAATGTCTTTTTCTTTTATCATTTATGTGCCCGTTTGGTACTAGGTTTGCATAGTAGTGGCATGTCTGGGGTAGAATGCCTGAAATTAAGATGTTTGGGAACAAAGTATTTCTGTGCTTTGGTATTATGACGTAATGAAGTGTTGGATCTGACTGGGATCTCGTCTGAGTTCAATGCTAATATTCTATTATTTTCTTTTTAACTATTTAGGGATGTCTCTCTTTTGCATTCTGGCACGTACGATGATGTGGGAGATGGTTTTGTGGCCAATGATAAAATAAGGAAGGATAAGATTACTATATATGTGGAGCATCCTCGTCCTATTGAACCTCCTGTTGAGCCAGCTCCTCCACCTCCTCAGCCCCTAAAGCTAACAAAGAAGGAGCAGAAGAAACTCCGGACGCAGCGCCGTCTAGCAAAGGAGAAAGATAGGCAGGAGATGATTAGACAAGGCCTGATAGAACCACCCAAACCAAAAGTTAAAATGAGCAATTTAATGAAAGTTCTTGGCTCGGAAGCAACACAAGATCCTACTAAACTAGAGAAAGAGATTCGTGCTGCAGCTGCCGAGAGGGAACAGGCTCACATAGATAGAAACATTGCACGTAAACTTACTCCTGCAGAGCGCCGTGAGAAGAAAGAACGAAAGCTTTTTGACGATGCAAATTCACTGGAGAACTTTGTGTCTGTTTATAAGATCTACGACTTATCGCACCCACAGGCCCGGTTTAAAGTCGATGTTAATGCTAGAGAGAACCGGTTGACTGGATGTGCTGTGATATGTGATGGCATCAGTGTTCTGGTAGTTGAAGGGGGAAGCAAGTCCATCAAGAGGTATGGAAAGCTTATGCTTAGGCGTATAAATTGGGCTGCTTCTGTGAAAGAGGAGGAAGAGGCGGATGAAAGTGACGATAAGCCCGTTAACAAATGTTCACTGGTATGGCAAGGAAGTGTTGCCAAATCTAGTTTCAATAAATTTTTTATCCAGGAGTGCATGACAGAGGCAGCTGCTAGGAAGATTTTTGCCGATGCTGGTGTCGGTCATTATTGGGATCTCGCTGTGAACTTTTCCGACGATCAAATATAATCAAACTTCTCAGTTTGACATGATTCTGCTGATGATTTGCTTCAGTGTCTCCTGTCTTGCATGGTTGAAGTTTAGGCAACGCCGAATTGTCCAAAGCGAAGACAACAGTACGGGTTTGCTAGTCTTCCCTGTTTCTATTACGCTCTGACTCGCTTATCCAAGTTTAAGAGAATTTGCAGATTTCACGTATCAGAACTGAATTCTGTATGCAAAAATGTTATAACTGGTGATCCGTTGTTCTTAGCGAGCAGAACTTTGAAATCTTATGACGCCAGGATCATCTCCAGACATAGGGTATCGTGTCGAATTCGGCTATAGTCTTCATTTAGTGTACTTTTATAGATGTTGCGACTCTTTCTGCCACCCTTCATAACTTAGCAATGTTTGACAATCAATCCATTCCATTTGGTAGTTAGATGAAGGAAGGTGGCCTTGAATAATTTTCTACTCAAACGAAAAGGTACTTTTTTTAGTCTTTAATTACTACTATGCCCTGCAGTTATTGTAAACTGTCACTGGTTGTTCTATCTCCTTGTTTATATTTAATTGTAGGTGATGGTTGAAGATTTGAATCCAAGCCTCGAAGCTCAAATCATTTTGAATTTCATCGATTGAGGTAGTATTTTCAAAACTTTTGTAGTGCTCAGTTATATATTCAAAATCAATTTTGGAAATTTTCACAACAATCAAGGTTGGGTGTATTTTGGATTGCTTTTAGATTTTGATTGTAGGCACTTATCAGTTTGAAGTTCTTGGTCCAAAAAATTCTATAAAAATGTTATCTTACAAAGCACTTTTTAGGTGTTTTTAATTTTTTTCAAATATGATTCTATGTTACTTCTGGATACTCACTAAGTATAGGTTTTAGTTCCTAAGGTTTCATTGTTTTTTGATTTAGTCCCTG

mRNA sequence

ATGGGAAAATTCAGATTGGAGGCACCACCGATGGATCCACGGTGGAACCTATTGATATGTCATCAGCAAGTGTGCCCCAGAGTTTGGTACACCCTAGTCATTCCATTCCTATCAAGTACAGATGGGCCATCATCAACTGCTGGGAAAAGTGGAAATCTCTCTCTTGATGCTCTAGCAAAAGCTAAGAAAGCTTTACAGATGCAGAAAGAATTGGCCGAGAAGTTGAAGAAAATTCCCCTGATGAAGAAAGATGGGGGTTCAAGTTCTGCAAGCAGCTCAGTTGTAAAGTTGGAGGACAAATCTAAACCAGCAGGTGGTGTGTTGGGGCCATCGCCAACTACAAATATTGGCACAACTATTTCTGCTGGGGTAGCATCAAGTTCATCGACCTTACCTGCTGCTACTAATACACATGGCGGTGGTATTAATGTTCCAGCAGGCCTTACCTCTATACCCCATTTTGAAGCTGTCAAACGTGCACAGGAGCTTGCTGCTAGGATGGGATTTCGGCAGGATCCAGAGTTTGCTCCTCTCATAAATTTGTTTCCAGGGAATATAGCAACTGATGTTGCTGTTCCGCAGAAGCCAGTCAAGGCCCCTGTCCTTCGTCTTGATGCACTTGGCAGGGAAATAGATGAACAAGGAAATGTGGTCAATATAACCAAACCAAGCAACCTTAGCACTCTAAAGGTTAACATTAACAAACAGAAAAAGGATGCATTTCAGATTCTTAAACCTGAACTTGAGGTGGATCCAGAATCAAACCCTCATTTTGATGAGAGGATGGGTATAAATAAAACTAAACTCTTGAGGCCGAAGAGGATGAATTTCCAATTTGTTGAGGAAGGGAAATGGTCTAAGGAGGCTGAAACCATAAAATTAAGGAGTAAGTTCGGAGAGGCACAAGCCAAAGAGCGAAGGGAGAAGCAGGCACAATTGGCCAAGGCAAAGGCAGCACCTGATATAAACCCGAATTTGATCGAGGTATCAGAGAGAGTTATTGTGAAAGAAAAAACGAAAGAACCAATTCCTGAAATTGAGTGGTGGGATGTCTCTCTTTTGCATTCTGGCACGTACGATGATGTGGGAGATGGTTTTGTGGCCAATGATAAAATAAGGAAGGATAAGATTACTATATATGTGGAGCATCCTCGTCCTATTGAACCTCCTGTTGAGCCAGCTCCTCCACCTCCTCAGCCCCTAAAGCTAACAAAGAAGGAGCAGAAGAAACTCCGGACGCAGCGCCGTCTAGCAAAGGAGAAAGATAGGCAGGAGATGATTAGACAAGGCCTGATAGAACCACCCAAACCAAAAGTTAAAATGAGCAATTTAATGAAAGTTCTTGGCTCGGAAGCAACACAAGATCCTACTAAACTAGAGAAAGAGATTCGTGCTGCAGCTGCCGAGAGGGAACAGGCTCACATAGATAGAAACATTGCACGTAAACTTACTCCTGCAGAGCGCCGTGAGAAGAAAGAACGAAAGCTTTTTGACGATGCAAATTCACTGGAGAACTTTGTGTCTGTTTATAAGATCTACGACTTATCGCACCCACAGGCCCGGTTTAAAGTCGATGTTAATGCTAGAGAGAACCGGTTGACTGGATGTGCTGTGATATGTGATGGCATCAGTGTTCTGGTAGTTGAAGGGGGAAGCAAGTCCATCAAGAGGTATGGAAAGCTTATGCTTAGGCGTATAAATTGGGCTGCTTCTGTGAAAGAGGAGGAAGAGGCGGATGAAAGTGACGATAAGCCCGTTAACAAATGTTCACTGGTATGGCAAGGAAGTGTTGCCAAATCTAGTTTCAATAAATTTTTTATCCAGGAGTGCATGACAGAGGCAGCTGCTAGGAAGATTTTTGCCGATGCTGGTGTCGGTCATTATTGGGATCTCGCTGTGAACTTTTCCGACGATCAAATATAA

Coding sequence (CDS)

ATGGGAAAATTCAGATTGGAGGCACCACCGATGGATCCACGGTGGAACCTATTGATATGTCATCAGCAAGTGTGCCCCAGAGTTTGGTACACCCTAGTCATTCCATTCCTATCAAGTACAGATGGGCCATCATCAACTGCTGGGAAAAGTGGAAATCTCTCTCTTGATGCTCTAGCAAAAGCTAAGAAAGCTTTACAGATGCAGAAAGAATTGGCCGAGAAGTTGAAGAAAATTCCCCTGATGAAGAAAGATGGGGGTTCAAGTTCTGCAAGCAGCTCAGTTGTAAAGTTGGAGGACAAATCTAAACCAGCAGGTGGTGTGTTGGGGCCATCGCCAACTACAAATATTGGCACAACTATTTCTGCTGGGGTAGCATCAAGTTCATCGACCTTACCTGCTGCTACTAATACACATGGCGGTGGTATTAATGTTCCAGCAGGCCTTACCTCTATACCCCATTTTGAAGCTGTCAAACGTGCACAGGAGCTTGCTGCTAGGATGGGATTTCGGCAGGATCCAGAGTTTGCTCCTCTCATAAATTTGTTTCCAGGGAATATAGCAACTGATGTTGCTGTTCCGCAGAAGCCAGTCAAGGCCCCTGTCCTTCGTCTTGATGCACTTGGCAGGGAAATAGATGAACAAGGAAATGTGGTCAATATAACCAAACCAAGCAACCTTAGCACTCTAAAGGTTAACATTAACAAACAGAAAAAGGATGCATTTCAGATTCTTAAACCTGAACTTGAGGTGGATCCAGAATCAAACCCTCATTTTGATGAGAGGATGGGTATAAATAAAACTAAACTCTTGAGGCCGAAGAGGATGAATTTCCAATTTGTTGAGGAAGGGAAATGGTCTAAGGAGGCTGAAACCATAAAATTAAGGAGTAAGTTCGGAGAGGCACAAGCCAAAGAGCGAAGGGAGAAGCAGGCACAATTGGCCAAGGCAAAGGCAGCACCTGATATAAACCCGAATTTGATCGAGGTATCAGAGAGAGTTATTGTGAAAGAAAAAACGAAAGAACCAATTCCTGAAATTGAGTGGTGGGATGTCTCTCTTTTGCATTCTGGCACGTACGATGATGTGGGAGATGGTTTTGTGGCCAATGATAAAATAAGGAAGGATAAGATTACTATATATGTGGAGCATCCTCGTCCTATTGAACCTCCTGTTGAGCCAGCTCCTCCACCTCCTCAGCCCCTAAAGCTAACAAAGAAGGAGCAGAAGAAACTCCGGACGCAGCGCCGTCTAGCAAAGGAGAAAGATAGGCAGGAGATGATTAGACAAGGCCTGATAGAACCACCCAAACCAAAAGTTAAAATGAGCAATTTAATGAAAGTTCTTGGCTCGGAAGCAACACAAGATCCTACTAAACTAGAGAAAGAGATTCGTGCTGCAGCTGCCGAGAGGGAACAGGCTCACATAGATAGAAACATTGCACGTAAACTTACTCCTGCAGAGCGCCGTGAGAAGAAAGAACGAAAGCTTTTTGACGATGCAAATTCACTGGAGAACTTTGTGTCTGTTTATAAGATCTACGACTTATCGCACCCACAGGCCCGGTTTAAAGTCGATGTTAATGCTAGAGAGAACCGGTTGACTGGATGTGCTGTGATATGTGATGGCATCAGTGTTCTGGTAGTTGAAGGGGGAAGCAAGTCCATCAAGAGGTATGGAAAGCTTATGCTTAGGCGTATAAATTGGGCTGCTTCTGTGAAAGAGGAGGAAGAGGCGGATGAAAGTGACGATAAGCCCGTTAACAAATGTTCACTGGTATGGCAAGGAAGTGTTGCCAAATCTAGTTTCAATAAATTTTTTATCCAGGAGTGCATGACAGAGGCAGCTGCTAGGAAGATTTTTGCCGATGCTGGTGTCGGTCATTATTGGGATCTCGCTGTGAACTTTTCCGACGATCAAATATAA

Protein sequence

MGKFRLEAPPMDPRWNLLICHQQVCPRVWYTLVIPFLSSTDGPSSTAGKSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKKDGGSSSASSSVVKLEDKSKPAGGVLGPSPTTNIGTTISAGVASSSSTLPAATNTHGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNIATDVAVPQKPVKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKPELEVDPESNPHFDERMGINKTKLLRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKERREKQAQLAKAKAAPDINPNLIEVSERVIVKEKTKEPIPEIEWWDVSLLHSGTYDDVGDGFVANDKIRKDKITIYVEHPRPIEPPVEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFDDANSLENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIKRYGKLMLRRINWAASVKEEEEADESDDKPVNKCSLVWQGSVAKSSFNKFFIQECMTEAAARKIFADAGVGHYWDLAVNFSDDQI

Homology

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BLAST of MC09g_new0387 vs. ExPASy Swiss-Prot
Match: Q9C7E7 (Protein RDM16 OS=Arabidopsis thaliana OX=3702 GN=RDM16 PE=2 SV=1)

HSP 1 Score: 723.0 bits (1865), Expect = 2.9e-207
Identity = 399/611 (65.30%), Postives = 476/611 (77.91%), Query Frame = 0


Query: 34  IPFLSSTDG-PSSTAGK-SGNLSLDA---LAKAKKALQMQKELAEKLKKIPLMKKDGGSS 93
           +P  SSTDG P STAGK S NL LD+    AKA+KALQ+QK LA++LK +PL+KK    +
Sbjct: 202 VPGKSSTDGRPLSTAGKSSANLPLDSSALAAKARKALQLQKGLADRLKNLPLLKKATKPT 261

Query: 94  SASSSVVKLEDKSKPAGGVLGPSPTTNIGTTISAGVASSSSTLPAATNTHGGGINVPAGL 153
           S  S   ++            PS TT     +S G  S +STLP     H G     AG 
Sbjct: 262 SEGSPHTRVP-----------PSTTT---PAVSTG-TSFASTLP-----HTG----LAGF 321

Query: 154 TSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNIATDVAVPQKPVKAPVLRLDALG 213
            SI + EAVKRAQELAA MGF QD EFAP+INLFPG   +D+ V Q+P K PVLR+DALG
Sbjct: 322 GSIANIEAVKRAQELAANMGFHQDREFAPVINLFPGQAPSDMTVAQRPEKPPVLRVDALG 381

Query: 214 REIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKPELEVDPESNPHFDERMGINKTK 273
           REIDE GNV+++TKPSNLSTLKVNINK+KKDAFQILKP+LE D + NP+FD RMGI++ K
Sbjct: 382 REIDEHGNVISVTKPSNLSTLKVNINKKKKDAFQILKPQLEADLKENPYFDTRMGIDEKK 441

Query: 274 LLRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKERREKQAQLAKAKAAPDINPNLIE 333
           +LRPKRM+FQFVEEGKW+++AE +K +S FGEA+AKE + KQAQLAKA    DINPNLIE
Sbjct: 442 ILRPKRMSFQFVEEGKWTRDAENLKFKSHFGEAKAKELKVKQAQLAKAN--DDINPNLIE 501

Query: 334 VSERVIVKEKTKEPIPEIEWWDVSLLHSGTYDDVGDGFVANDKIRKDKITIYVEHPRPIE 393
           VSERV  KEK KEPIP++EWWD ++L +G Y ++ DG +    ++ +K+T Y+EHPRPIE
Sbjct: 502 VSERVPRKEKPKEPIPDVEWWDANVLTNGEYGEITDGTITESHLKIEKLTHYIEHPRPIE 561

Query: 394 PPVEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVL 453
           PP E APPPPQPLKLTKKEQKKLRTQRRLAKEK++QEMIRQGL+EPPK KVKMSNLMKVL
Sbjct: 562 PPAEAAPPPPQPLKLTKKEQKKLRTQRRLAKEKEKQEMIRQGLLEPPKAKVKMSNLMKVL 621

Query: 454 GSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFDDANSLENFVS 513
           GSEATQDPTKLEKEIR AAAEREQAH DRN ARKLTPAE+REKKERKLFDD  ++E  VS
Sbjct: 622 GSEATQDPTKLEKEIRTAAAEREQAHTDRNAARKLTPAEKREKKERKLFDDPTTVETIVS 681

Query: 514 VYKIYDLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIKRYGKLMLRRINW 573
           VYKI  LSHP+ RFKV++NARENRLTGC+V+ D +SV+VVEG SK+IKRYGKLM++RINW
Sbjct: 682 VYKIKKLSHPKTRFKVEMNARENRLTGCSVMTDEMSVVVVEGKSKAIKRYGKLMMKRINW 741

Query: 574 -AASVKEEEEADESDDKPVNKCSLVWQGSVAKSSFNKFFIQECMTEAAARKIFADAGVGH 633
             A  KE  E +E +    NKC LVWQGS+ K SF++F + EC+TE+ A+K+F DAGV H
Sbjct: 742 EEAERKEGNEDEEEEVNGGNKCWLVWQGSIGKPSFHRFHVHECVTESTAKKVFMDAGVVH 786

Query: 634 YWDLAVNFSDD 639
           YWDLAVN+SDD
Sbjct: 802 YWDLAVNYSDD 786

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BLAST of MC09g_new0387 vs. ExPASy Swiss-Prot
Match: O43395 (U4/U6 small nuclear ribonucleoprotein Prp3 OS=Homo sapiens OX=9606 GN=PRPF3 PE=1 SV=2)

HSP 1 Score: 273.1 bits (697), Expect = 8.1e-72
Identity = 188/498 (37.75%), Postives = 277/498 (55.62%), Query Frame = 0


Query: 155 EAVKRAQELAARM--------GFRQDPEFAPLINLFPGNIATDVAVPQKPVKAPVLRLDA 214
           E  ++A EL AR+        G   +     L NL    IA      +   K   L LD 
Sbjct: 201 EKARKAAELQARIQAQLALKPGLIGNANMVGLANLHAMGIAPPKVELKDQTKPTPLILDE 260

Query: 215 LGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAF-QILKPELEVDPESNPHFDERMGIN 274
            GR +D  G  + +T    + TLK NI   K++ F Q LK +   D ESN  FD R+ I 
Sbjct: 261 QGRTVDATGKEIELT--HRMPTLKANIRAVKREQFKQQLKEKPSEDMESNTFFDPRVSIA 320

Query: 275 KTKLLRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKERREKQAQLAKAKAAPDINPN 334
            +   + +R  F+F ++GK+ K A+ ++ +++  + QA      +   A  K     +  
Sbjct: 321 PS---QRQRRTFKFHDKGKFEKIAQRLRTKAQLEKLQA------EISQAARKTGIHTSTR 380

Query: 335 LIEVSERVIVKEKTKEPIPEIEWWDVSLLHSGTYDDVGDGFVANDKIRKD--KITIYVEH 394
           L  ++ +   KE  +  IPEIEWWD  ++ +G +D         +  R+D   IT  VEH
Sbjct: 381 LALIAPK---KELKEGDIPEIEWWDSYIIPNG-FD-----LTEENPKREDYFGITNLVEH 440

Query: 395 PRPIEPPVEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSN 454
           P  + PPV+   P    + LTKKEQKKLR Q R   +K+ QE +R GL+ PP+PKV++SN
Sbjct: 441 PAQLNPPVDNDTPVTLGVYLTKKEQKKLRRQTRREAQKELQEKVRLGLMPPPEPKVRISN 500

Query: 455 LMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFDDANSL 514
           LM+VLG+EA QDPTK+E  +RA  A+R++AH + N ARKLT  +R+ KK +KL +D  S 
Sbjct: 501 LMRVLGTEAVQDPTKVEAHVRAQMAKRQKAHEEANAARKLTAEQRKVKKIKKLKEDI-SQ 560

Query: 515 ENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIKRYGKLML 574
              +SVY++ +LS+P  +FK++ NA +  LTG  V+   ++V+VVEGG K+ K++ +LML
Sbjct: 561 GVHISVYRVRNLSNPAKKFKIEANAGQLYLTGVVVLHKDVNVVVVEGGPKAQKKFKRLML 620

Query: 575 RRINWAASVK-----EEEEADESDDKPVNKCSLVWQGSVAKSSFNKFFIQECMTEAAARK 634
            RI W          ++EE+DE   K  NKC LVW+G+    SF +   ++C TE  AR+
Sbjct: 621 HRIKWDEQTSNTKGDDDEESDEEAVKKTNKCVLVWEGTAKDRSFGEMKFKQCPTENMARE 677

Query: 635 IFADAGVGHYWDLAVNFS 637
            F   G  HYWDLA++ S
Sbjct: 681 HFKKHGAEHYWDLALSES 677

[Close]

BLAST of MC09g_new0387 vs. ExPASy Swiss-Prot
Match: Q5R5F1 (U4/U6 small nuclear ribonucleoprotein Prp3 OS=Pongo abelii OX=9601 GN=PRPF3 PE=2 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 8.1e-72
Identity = 188/498 (37.75%), Postives = 277/498 (55.62%), Query Frame = 0


Query: 155 EAVKRAQELAARM--------GFRQDPEFAPLINLFPGNIATDVAVPQKPVKAPVLRLDA 214
           E  ++A EL AR+        G   +     L NL    IA      +   K   L LD 
Sbjct: 201 EKARKAAELQARIQAQLALKPGLIGNANMVGLANLHAMGIAPPKVELKDQTKPTPLILDE 260

Query: 215 LGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAF-QILKPELEVDPESNPHFDERMGIN 274
            GR +D  G  + +T    + TLK NI   K++ F Q LK +   D ESN  FD R+ I 
Sbjct: 261 QGRTVDATGKEIELT--HRMPTLKANIRAVKREQFRQQLKEKPSEDMESNTFFDPRVSIA 320

Query: 275 KTKLLRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKERREKQAQLAKAKAAPDINPN 334
            +   + +R  F+F ++GK+ K A+ ++ +++  + QA      +   A  K     +  
Sbjct: 321 PS---QRQRRTFKFHDKGKFEKIAQRLRTKAQLEKLQA------EISQAARKTGIHTSTR 380

Query: 335 LIEVSERVIVKEKTKEPIPEIEWWDVSLLHSGTYDDVGDGFVANDKIRKD--KITIYVEH 394
           L  ++ +   KE  +  IPEIEWWD  ++ +G +D         +  R+D   IT  VEH
Sbjct: 381 LALIAPK---KELKEGDIPEIEWWDSYIIPNG-FD-----LTEENPKREDYFGITNLVEH 440

Query: 395 PRPIEPPVEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSN 454
           P  + PPV+   P    + LTKKEQKKLR Q R   +K+ QE +R GL+ PP+PKV++SN
Sbjct: 441 PAQLNPPVDNDTPVTLGVYLTKKEQKKLRRQTRREAQKELQEKVRLGLMPPPEPKVRISN 500

Query: 455 LMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFDDANSL 514
           LM+VLG+EA QDPTK+E  +RA  A+R++AH + N ARKLT  +R+ KK +KL +D  S 
Sbjct: 501 LMRVLGTEAVQDPTKVEAHVRAQMAKRQKAHEEANAARKLTAEQRKVKKIKKLKEDI-SQ 560

Query: 515 ENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIKRYGKLML 574
              +SVY++ +LS+P  +FK++ NA +  LTG  V+   ++V+VVEGG K+ K++ +LML
Sbjct: 561 GVHISVYRVRNLSNPAKKFKIEANAGQLYLTGVVVLHKDVNVVVVEGGPKAQKKFKRLML 620

Query: 575 RRINWAASVK-----EEEEADESDDKPVNKCSLVWQGSVAKSSFNKFFIQECMTEAAARK 634
            RI W          ++EE+DE   K  NKC LVW+G+    SF +   ++C TE  AR+
Sbjct: 621 HRIKWDEQTSNTKGDDDEESDEEAVKKTNKCVLVWEGTAKDRSFGEMKFKQCPTENMARE 677

Query: 635 IFADAGVGHYWDLAVNFS 637
            F   G  HYWDLA++ S
Sbjct: 681 HFKKHGAEHYWDLALSES 677

[Close]

BLAST of MC09g_new0387 vs. ExPASy Swiss-Prot
Match: Q922U1 (U4/U6 small nuclear ribonucleoprotein Prp3 OS=Mus musculus OX=10090 GN=Prpf3 PE=1 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 1.1e-71
Identity = 189/498 (37.95%), Postives = 276/498 (55.42%), Query Frame = 0


Query: 155 EAVKRAQELAARM--------GFRQDPEFAPLINLFPGNIATDVAVPQKPVKAPVLRLDA 214
           E  ++A EL AR+        G   +     L NL    IA      +   K   L LD 
Sbjct: 201 EKARKAAELQARIQAQLALKPGLIGNANMVGLANLHAMGIAPPKVELKDQTKPTPLILDE 260

Query: 215 LGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAF-QILKPELEVDPESNPHFDERMGIN 274
            GR +D  G  V +T    + TLK NI   K++ F Q LK +   D ESN  FD R+ I 
Sbjct: 261 QGRTVDATGKEVELT--HRMPTLKANIRAVKREQFKQQLKEKPSEDMESNTFFDPRVSIA 320

Query: 275 KTKLLRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKERREKQAQLAKAKAAPDINPN 334
            +   + +R  F+F ++GK+ K A+ ++ +++  + QA      +   A  K     +  
Sbjct: 321 PS---QRQRRTFKFHDKGKFEKIAQRLRTKAQLEKLQA------EISQAARKTGIHTSTR 380

Query: 335 LIEVSERVIVKEKTKEPIPEIEWWDVSLLHSGTYDDVGDGFVANDKIRKD--KITIYVEH 394
           L  ++ +   KE  +  IPEIEWWD  ++ +G +D         +  R+D   IT  VEH
Sbjct: 381 LALIAPK---KELKEGDIPEIEWWDSYIIPNG-FD-----LTEENPKREDYFGITNLVEH 440

Query: 395 PRPIEPPVEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSN 454
           P  + PPV+   P    + LTKKEQKKLR Q R   +K+ QE +R GL  PP+PKV++SN
Sbjct: 441 PAQLNPPVDNDTPVTLGVYLTKKEQKKLRRQTRREAQKELQEKVRLGLTPPPEPKVRISN 500

Query: 455 LMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFDDANSL 514
           LM+VLG+EA QDPTK+E  +RA  A+R++AH + N ARKLT  +R+ KK +KL +D  S 
Sbjct: 501 LMRVLGTEAVQDPTKVEAHVRAQMAKRQKAHEEANAARKLTAEQRKVKKIKKLKEDI-SQ 560

Query: 515 ENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIKRYGKLML 574
              +SVY++ +LS+P  +FK++ NA +  LTG  V+   ++V+VVEGG K+ K++ +LML
Sbjct: 561 GVHISVYRVRNLSNPAKKFKIEANAGQLYLTGVVVLHKDVNVVVVEGGPKAQKKFKRLML 620

Query: 575 RRINWAASVK-----EEEEADESDDKPVNKCSLVWQGSVAKSSFNKFFIQECMTEAAARK 634
            RI W          ++EE+DE   K  NKC LVW+G+    SF +   ++C TE  AR+
Sbjct: 621 HRIKWDEQTSNTKGDDDEESDEEAVKKTNKCVLVWEGTAKDRSFGEMKFKQCPTENMARE 677

Query: 635 IFADAGVGHYWDLAVNFS 637
            F   G  HYWDLA++ S
Sbjct: 681 HFKKHGAEHYWDLALSES 677

[Close]

BLAST of MC09g_new0387 vs. ExPASy Swiss-Prot
Match: Q2KIA6 (U4/U6 small nuclear ribonucleoprotein Prp3 OS=Bos taurus OX=9913 GN=PRPF3 PE=2 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 1.4e-71
Identity = 184/483 (38.10%), Postives = 272/483 (56.31%), Query Frame = 0


Query: 162 ELAARMGFRQDPEFAPLINLFPGNIATDVAVPQKPVKAPVLRLDALGREIDEQGNVVNIT 221
           +LA + G   +     L NL    IA      +   K   L LD  GR +D  G  + +T
Sbjct: 216 QLALKPGLIGNANMVGLANLHAMGIAPPKVELKDQTKPTPLILDEQGRTVDATGKEIELT 275

Query: 222 KPSNLSTLKVNINKQKKDAF-QILKPELEVDPESNPHFDERMGINKTKLLRPKRMNFQFV 281
               + TLK NI   K++ F Q LK +   D ESN  FD R+ I  +   + +R  F+F 
Sbjct: 276 --HRMPTLKANIRAVKREQFKQQLKEKPSEDMESNTFFDPRVSIAPS---QRQRRTFKFH 335

Query: 282 EEGKWSKEAETIKLRSKFGEAQAKERREKQAQLAKAKAAPDINPNLIEVSERVIVKEKTK 341
           ++GK+ K A+ ++ +++  + QA      +   A  K     +  L  ++ +   KE  +
Sbjct: 336 DKGKFEKIAQRLRTKAQLEKLQA------EISQAARKTGIHTSTRLALIAPK---KELKE 395

Query: 342 EPIPEIEWWDVSLLHSGTYDDVGDGFVANDKIRKD--KITIYVEHPRPIEPPVEPAPPPP 401
             IPEIEWWD  ++ +G +D         +  R+D   IT  VEHP  + PPV+   P  
Sbjct: 396 GDIPEIEWWDSYIIPNG-FD-----LTEENPKREDYFGITNLVEHPAQLNPPVDNDTPVT 455

Query: 402 QPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTK 461
             + LTKKEQKKLR Q R   +K+ QE +R GL+ PP+PKV++SNLM+VLG+EA QDPTK
Sbjct: 456 LGVYLTKKEQKKLRRQTRREAQKELQEKVRLGLMPPPEPKVRISNLMRVLGTEAVQDPTK 515

Query: 462 LEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFDDANSLENFVSVYKIYDLSHP 521
           +E  +RA  A+R++AH + N ARKLT  +R+ KK +KL +D  S    +SVY++ +LS+P
Sbjct: 516 VEAHVRAQMAKRQKAHEEANAARKLTAEQRKVKKIKKLKEDI-SQGVHISVYRVRNLSNP 575

Query: 522 QARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIKRYGKLMLRRINWAASVK----- 581
             +FK++ NA +  LTG  V+   ++V+VVEGG K+ K++ +LML RI W          
Sbjct: 576 AKKFKIEANAGQLYLTGVVVLHKDVNVVVVEGGPKAQKKFKRLMLHRIKWDEQTSNTKGD 635

Query: 582 EEEEADESDDKPVNKCSLVWQGSVAKSSFNKFFIQECMTEAAARKIFADAGVGHYWDLAV 637
           ++EE+DE   K  NKC LVW+G+    SF +   ++C TE  AR+ F   G  HYWDLA+
Sbjct: 636 DDEESDEEAVKKTNKCVLVWEGTAKDRSFGEMKFKQCPTENMAREHFKKHGAEHYWDLAL 677

[Close]

BLAST of MC09g_new0387 vs. NCBI nr
Match: XP_022139032.1 (protein RDM16 isoform X3 [Momordica charantia])

HSP 1 Score: 1234 bits (3192), Expect = 0.0
Identity = 640/640 (100.00%), Postives = 640/640 (100.00%), Query Frame = 0


Query: 1   MGKFRLEAPPMDPRWNLLICHQQVCPRVWYTLVIPFLSSTDGPSSTAGKSGNLSLDALAK 60
           MGKFRLEAPPMDPRWNLLICHQQVCPRVWYTLVIPFLSSTDGPSSTAGKSGNLSLDALAK
Sbjct: 1   MGKFRLEAPPMDPRWNLLICHQQVCPRVWYTLVIPFLSSTDGPSSTAGKSGNLSLDALAK 60

Query: 61  AKKALQMQKELAEKLKKIPLMKKDGGSSSASSSVVKLEDKSKPAGGVLGPSPTTNIGTTI 120
           AKKALQMQKELAEKLKKIPLMKKDGGSSSASSSVVKLEDKSKPAGGVLGPSPTTNIGTTI
Sbjct: 61  AKKALQMQKELAEKLKKIPLMKKDGGSSSASSSVVKLEDKSKPAGGVLGPSPTTNIGTTI 120

Query: 121 SAGVASSSSTLPAATNTHGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLIN 180
           SAGVASSSSTLPAATNTHGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLIN
Sbjct: 121 SAGVASSSSTLPAATNTHGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLIN 180

Query: 181 LFPGNIATDVAVPQKPVKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDA 240
           LFPGNIATDVAVPQKPVKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDA
Sbjct: 181 LFPGNIATDVAVPQKPVKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDA 240

Query: 241 FQILKPELEVDPESNPHFDERMGINKTKLLRPKRMNFQFVEEGKWSKEAETIKLRSKFGE 300
           FQILKPELEVDPESNPHFDERMGINKTKLLRPKRMNFQFVEEGKWSKEAETIKLRSKFGE
Sbjct: 241 FQILKPELEVDPESNPHFDERMGINKTKLLRPKRMNFQFVEEGKWSKEAETIKLRSKFGE 300

Query: 301 AQAKERREKQAQLAKAKAAPDINPNLIEVSERVIVKEKTKEPIPEIEWWDVSLLHSGTYD 360
           AQAKERREKQAQLAKAKAAPDINPNLIEVSERVIVKEKTKEPIPEIEWWDVSLLHSGTYD
Sbjct: 301 AQAKERREKQAQLAKAKAAPDINPNLIEVSERVIVKEKTKEPIPEIEWWDVSLLHSGTYD 360

Query: 361 DVGDGFVANDKIRKDKITIYVEHPRPIEPPVEPAPPPPQPLKLTKKEQKKLRTQRRLAKE 420
           DVGDGFVANDKIRKDKITIYVEHPRPIEPPVEPAPPPPQPLKLTKKEQKKLRTQRRLAKE
Sbjct: 361 DVGDGFVANDKIRKDKITIYVEHPRPIEPPVEPAPPPPQPLKLTKKEQKKLRTQRRLAKE 420

Query: 421 KDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIA 480
           KDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIA
Sbjct: 421 KDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIA 480

Query: 481 RKLTPAERREKKERKLFDDANSLENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVIC 540
           RKLTPAERREKKERKLFDDANSLENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVIC
Sbjct: 481 RKLTPAERREKKERKLFDDANSLENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVIC 540

Query: 541 DGISVLVVEGGSKSIKRYGKLMLRRINWAASVKEEEEADESDDKPVNKCSLVWQGSVAKS 600
           DGISVLVVEGGSKSIKRYGKLMLRRINWAASVKEEEEADESDDKPVNKCSLVWQGSVAKS
Sbjct: 541 DGISVLVVEGGSKSIKRYGKLMLRRINWAASVKEEEEADESDDKPVNKCSLVWQGSVAKS 600

Query: 601 SFNKFFIQECMTEAAARKIFADAGVGHYWDLAVNFSDDQI 640
           SFNKFFIQECMTEAAARKIFADAGVGHYWDLAVNFSDDQI
Sbjct: 601 SFNKFFIQECMTEAAARKIFADAGVGHYWDLAVNFSDDQI 640

[Close]

BLAST of MC09g_new0387 vs. NCBI nr
Match: XP_022139033.1 (protein RDM16 isoform X4 [Momordica charantia])

HSP 1 Score: 1212 bits (3135), Expect = 0.0
Identity = 630/630 (100.00%), Postives = 630/630 (100.00%), Query Frame = 0


Query: 11  MDPRWNLLICHQQVCPRVWYTLVIPFLSSTDGPSSTAGKSGNLSLDALAKAKKALQMQKE 70
           MDPRWNLLICHQQVCPRVWYTLVIPFLSSTDGPSSTAGKSGNLSLDALAKAKKALQMQKE
Sbjct: 1   MDPRWNLLICHQQVCPRVWYTLVIPFLSSTDGPSSTAGKSGNLSLDALAKAKKALQMQKE 60

Query: 71  LAEKLKKIPLMKKDGGSSSASSSVVKLEDKSKPAGGVLGPSPTTNIGTTISAGVASSSST 130
           LAEKLKKIPLMKKDGGSSSASSSVVKLEDKSKPAGGVLGPSPTTNIGTTISAGVASSSST
Sbjct: 61  LAEKLKKIPLMKKDGGSSSASSSVVKLEDKSKPAGGVLGPSPTTNIGTTISAGVASSSST 120

Query: 131 LPAATNTHGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNIATDV 190
           LPAATNTHGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNIATDV
Sbjct: 121 LPAATNTHGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNIATDV 180

Query: 191 AVPQKPVKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKPELEV 250
           AVPQKPVKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKPELEV
Sbjct: 181 AVPQKPVKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKPELEV 240

Query: 251 DPESNPHFDERMGINKTKLLRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKERREKQ 310
           DPESNPHFDERMGINKTKLLRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKERREKQ
Sbjct: 241 DPESNPHFDERMGINKTKLLRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKERREKQ 300

Query: 311 AQLAKAKAAPDINPNLIEVSERVIVKEKTKEPIPEIEWWDVSLLHSGTYDDVGDGFVAND 370
           AQLAKAKAAPDINPNLIEVSERVIVKEKTKEPIPEIEWWDVSLLHSGTYDDVGDGFVAND
Sbjct: 301 AQLAKAKAAPDINPNLIEVSERVIVKEKTKEPIPEIEWWDVSLLHSGTYDDVGDGFVAND 360

Query: 371 KIRKDKITIYVEHPRPIEPPVEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQG 430
           KIRKDKITIYVEHPRPIEPPVEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQG
Sbjct: 361 KIRKDKITIYVEHPRPIEPPVEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQG 420

Query: 431 LIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERRE 490
           LIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERRE
Sbjct: 421 LIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERRE 480

Query: 491 KKERKLFDDANSLENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEG 550
           KKERKLFDDANSLENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEG
Sbjct: 481 KKERKLFDDANSLENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEG 540

Query: 551 GSKSIKRYGKLMLRRINWAASVKEEEEADESDDKPVNKCSLVWQGSVAKSSFNKFFIQEC 610
           GSKSIKRYGKLMLRRINWAASVKEEEEADESDDKPVNKCSLVWQGSVAKSSFNKFFIQEC
Sbjct: 541 GSKSIKRYGKLMLRRINWAASVKEEEEADESDDKPVNKCSLVWQGSVAKSSFNKFFIQEC 600

Query: 611 MTEAAARKIFADAGVGHYWDLAVNFSDDQI 640
           MTEAAARKIFADAGVGHYWDLAVNFSDDQI
Sbjct: 601 MTEAAARKIFADAGVGHYWDLAVNFSDDQI 630

[Close]

BLAST of MC09g_new0387 vs. NCBI nr
Match: XP_022139031.1 (protein RDM16 isoform X2 [Momordica charantia])

HSP 1 Score: 1149 bits (2972), Expect = 0.0
Identity = 603/603 (100.00%), Postives = 603/603 (100.00%), Query Frame = 0


Query: 38  SSTDGPSSTAGKSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKKDGGSSSASSSVVKL 97
           SSTDGPSSTAGKSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKKDGGSSSASSSVVKL
Sbjct: 325 SSTDGPSSTAGKSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKKDGGSSSASSSVVKL 384

Query: 98  EDKSKPAGGVLGPSPTTNIGTTISAGVASSSSTLPAATNTHGGGINVPAGLTSIPHFEAV 157
           EDKSKPAGGVLGPSPTTNIGTTISAGVASSSSTLPAATNTHGGGINVPAGLTSIPHFEAV
Sbjct: 385 EDKSKPAGGVLGPSPTTNIGTTISAGVASSSSTLPAATNTHGGGINVPAGLTSIPHFEAV 444

Query: 158 KRAQELAARMGFRQDPEFAPLINLFPGNIATDVAVPQKPVKAPVLRLDALGREIDEQGNV 217
           KRAQELAARMGFRQDPEFAPLINLFPGNIATDVAVPQKPVKAPVLRLDALGREIDEQGNV
Sbjct: 445 KRAQELAARMGFRQDPEFAPLINLFPGNIATDVAVPQKPVKAPVLRLDALGREIDEQGNV 504

Query: 218 VNITKPSNLSTLKVNINKQKKDAFQILKPELEVDPESNPHFDERMGINKTKLLRPKRMNF 277
           VNITKPSNLSTLKVNINKQKKDAFQILKPELEVDPESNPHFDERMGINKTKLLRPKRMNF
Sbjct: 505 VNITKPSNLSTLKVNINKQKKDAFQILKPELEVDPESNPHFDERMGINKTKLLRPKRMNF 564

Query: 278 QFVEEGKWSKEAETIKLRSKFGEAQAKERREKQAQLAKAKAAPDINPNLIEVSERVIVKE 337
           QFVEEGKWSKEAETIKLRSKFGEAQAKERREKQAQLAKAKAAPDINPNLIEVSERVIVKE
Sbjct: 565 QFVEEGKWSKEAETIKLRSKFGEAQAKERREKQAQLAKAKAAPDINPNLIEVSERVIVKE 624

Query: 338 KTKEPIPEIEWWDVSLLHSGTYDDVGDGFVANDKIRKDKITIYVEHPRPIEPPVEPAPPP 397
           KTKEPIPEIEWWDVSLLHSGTYDDVGDGFVANDKIRKDKITIYVEHPRPIEPPVEPAPPP
Sbjct: 625 KTKEPIPEIEWWDVSLLHSGTYDDVGDGFVANDKIRKDKITIYVEHPRPIEPPVEPAPPP 684

Query: 398 PQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPT 457
           PQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPT
Sbjct: 685 PQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPT 744

Query: 458 KLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFDDANSLENFVSVYKIYDLSH 517
           KLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFDDANSLENFVSVYKIYDLSH
Sbjct: 745 KLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFDDANSLENFVSVYKIYDLSH 804

Query: 518 PQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIKRYGKLMLRRINWAASVKEEEE 577
           PQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIKRYGKLMLRRINWAASVKEEEE
Sbjct: 805 PQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIKRYGKLMLRRINWAASVKEEEE 864

Query: 578 ADESDDKPVNKCSLVWQGSVAKSSFNKFFIQECMTEAAARKIFADAGVGHYWDLAVNFSD 637
           ADESDDKPVNKCSLVWQGSVAKSSFNKFFIQECMTEAAARKIFADAGVGHYWDLAVNFSD
Sbjct: 865 ADESDDKPVNKCSLVWQGSVAKSSFNKFFIQECMTEAAARKIFADAGVGHYWDLAVNFSD 924

Query: 638 DQI 640
           DQI
Sbjct: 925 DQI 927

[Close]

BLAST of MC09g_new0387 vs. NCBI nr
Match: XP_022139030.1 (protein RDM16 isoform X1 [Momordica charantia])

HSP 1 Score: 1149 bits (2972), Expect = 0.0
Identity = 603/603 (100.00%), Postives = 603/603 (100.00%), Query Frame = 0


Query: 38  SSTDGPSSTAGKSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKKDGGSSSASSSVVKL 97
           SSTDGPSSTAGKSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKKDGGSSSASSSVVKL
Sbjct: 331 SSTDGPSSTAGKSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKKDGGSSSASSSVVKL 390

Query: 98  EDKSKPAGGVLGPSPTTNIGTTISAGVASSSSTLPAATNTHGGGINVPAGLTSIPHFEAV 157
           EDKSKPAGGVLGPSPTTNIGTTISAGVASSSSTLPAATNTHGGGINVPAGLTSIPHFEAV
Sbjct: 391 EDKSKPAGGVLGPSPTTNIGTTISAGVASSSSTLPAATNTHGGGINVPAGLTSIPHFEAV 450

Query: 158 KRAQELAARMGFRQDPEFAPLINLFPGNIATDVAVPQKPVKAPVLRLDALGREIDEQGNV 217
           KRAQELAARMGFRQDPEFAPLINLFPGNIATDVAVPQKPVKAPVLRLDALGREIDEQGNV
Sbjct: 451 KRAQELAARMGFRQDPEFAPLINLFPGNIATDVAVPQKPVKAPVLRLDALGREIDEQGNV 510

Query: 218 VNITKPSNLSTLKVNINKQKKDAFQILKPELEVDPESNPHFDERMGINKTKLLRPKRMNF 277
           VNITKPSNLSTLKVNINKQKKDAFQILKPELEVDPESNPHFDERMGINKTKLLRPKRMNF
Sbjct: 511 VNITKPSNLSTLKVNINKQKKDAFQILKPELEVDPESNPHFDERMGINKTKLLRPKRMNF 570

Query: 278 QFVEEGKWSKEAETIKLRSKFGEAQAKERREKQAQLAKAKAAPDINPNLIEVSERVIVKE 337
           QFVEEGKWSKEAETIKLRSKFGEAQAKERREKQAQLAKAKAAPDINPNLIEVSERVIVKE
Sbjct: 571 QFVEEGKWSKEAETIKLRSKFGEAQAKERREKQAQLAKAKAAPDINPNLIEVSERVIVKE 630

Query: 338 KTKEPIPEIEWWDVSLLHSGTYDDVGDGFVANDKIRKDKITIYVEHPRPIEPPVEPAPPP 397
           KTKEPIPEIEWWDVSLLHSGTYDDVGDGFVANDKIRKDKITIYVEHPRPIEPPVEPAPPP
Sbjct: 631 KTKEPIPEIEWWDVSLLHSGTYDDVGDGFVANDKIRKDKITIYVEHPRPIEPPVEPAPPP 690

Query: 398 PQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPT 457
           PQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPT
Sbjct: 691 PQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPT 750

Query: 458 KLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFDDANSLENFVSVYKIYDLSH 517
           KLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFDDANSLENFVSVYKIYDLSH
Sbjct: 751 KLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFDDANSLENFVSVYKIYDLSH 810

Query: 518 PQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIKRYGKLMLRRINWAASVKEEEE 577
           PQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIKRYGKLMLRRINWAASVKEEEE
Sbjct: 811 PQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIKRYGKLMLRRINWAASVKEEEE 870

Query: 578 ADESDDKPVNKCSLVWQGSVAKSSFNKFFIQECMTEAAARKIFADAGVGHYWDLAVNFSD 637
           ADESDDKPVNKCSLVWQGSVAKSSFNKFFIQECMTEAAARKIFADAGVGHYWDLAVNFSD
Sbjct: 871 ADESDDKPVNKCSLVWQGSVAKSSFNKFFIQECMTEAAARKIFADAGVGHYWDLAVNFSD 930

Query: 638 DQI 640
           DQI
Sbjct: 931 DQI 933

[Close]

BLAST of MC09g_new0387 vs. NCBI nr
Match: XP_022139034.1 (protein RDM16 isoform X5 [Momordica charantia])

HSP 1 Score: 1097 bits (2838), Expect = 0.0
Identity = 574/574 (100.00%), Postives = 574/574 (100.00%), Query Frame = 0


Query: 67  MQKELAEKLKKIPLMKKDGGSSSASSSVVKLEDKSKPAGGVLGPSPTTNIGTTISAGVAS 126
           MQKELAEKLKKIPLMKKDGGSSSASSSVVKLEDKSKPAGGVLGPSPTTNIGTTISAGVAS
Sbjct: 1   MQKELAEKLKKIPLMKKDGGSSSASSSVVKLEDKSKPAGGVLGPSPTTNIGTTISAGVAS 60

Query: 127 SSSTLPAATNTHGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNI 186
           SSSTLPAATNTHGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNI
Sbjct: 61  SSSTLPAATNTHGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNI 120

Query: 187 ATDVAVPQKPVKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP 246
           ATDVAVPQKPVKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP
Sbjct: 121 ATDVAVPQKPVKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP 180

Query: 247 ELEVDPESNPHFDERMGINKTKLLRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKER 306
           ELEVDPESNPHFDERMGINKTKLLRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKER
Sbjct: 181 ELEVDPESNPHFDERMGINKTKLLRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKER 240

Query: 307 REKQAQLAKAKAAPDINPNLIEVSERVIVKEKTKEPIPEIEWWDVSLLHSGTYDDVGDGF 366
           REKQAQLAKAKAAPDINPNLIEVSERVIVKEKTKEPIPEIEWWDVSLLHSGTYDDVGDGF
Sbjct: 241 REKQAQLAKAKAAPDINPNLIEVSERVIVKEKTKEPIPEIEWWDVSLLHSGTYDDVGDGF 300

Query: 367 VANDKIRKDKITIYVEHPRPIEPPVEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEM 426
           VANDKIRKDKITIYVEHPRPIEPPVEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEM
Sbjct: 301 VANDKIRKDKITIYVEHPRPIEPPVEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEM 360

Query: 427 IRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPA 486
           IRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPA
Sbjct: 361 IRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPA 420

Query: 487 ERREKKERKLFDDANSLENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVICDGISVL 546
           ERREKKERKLFDDANSLENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVICDGISVL
Sbjct: 421 ERREKKERKLFDDANSLENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVICDGISVL 480

Query: 547 VVEGGSKSIKRYGKLMLRRINWAASVKEEEEADESDDKPVNKCSLVWQGSVAKSSFNKFF 606
           VVEGGSKSIKRYGKLMLRRINWAASVKEEEEADESDDKPVNKCSLVWQGSVAKSSFNKFF
Sbjct: 481 VVEGGSKSIKRYGKLMLRRINWAASVKEEEEADESDDKPVNKCSLVWQGSVAKSSFNKFF 540

Query: 607 IQECMTEAAARKIFADAGVGHYWDLAVNFSDDQI 640
           IQECMTEAAARKIFADAGVGHYWDLAVNFSDDQI
Sbjct: 541 IQECMTEAAARKIFADAGVGHYWDLAVNFSDDQI 574

[Close]

BLAST of MC09g_new0387 vs. ExPASy TrEMBL
Match: A0A6J1CCW0 (protein RDM16 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111010059 PE=4 SV=1)

HSP 1 Score: 1234 bits (3192), Expect = 0.0
Identity = 640/640 (100.00%), Postives = 640/640 (100.00%), Query Frame = 0


Query: 1   MGKFRLEAPPMDPRWNLLICHQQVCPRVWYTLVIPFLSSTDGPSSTAGKSGNLSLDALAK 60
           MGKFRLEAPPMDPRWNLLICHQQVCPRVWYTLVIPFLSSTDGPSSTAGKSGNLSLDALAK
Sbjct: 1   MGKFRLEAPPMDPRWNLLICHQQVCPRVWYTLVIPFLSSTDGPSSTAGKSGNLSLDALAK 60

Query: 61  AKKALQMQKELAEKLKKIPLMKKDGGSSSASSSVVKLEDKSKPAGGVLGPSPTTNIGTTI 120
           AKKALQMQKELAEKLKKIPLMKKDGGSSSASSSVVKLEDKSKPAGGVLGPSPTTNIGTTI
Sbjct: 61  AKKALQMQKELAEKLKKIPLMKKDGGSSSASSSVVKLEDKSKPAGGVLGPSPTTNIGTTI 120

Query: 121 SAGVASSSSTLPAATNTHGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLIN 180
           SAGVASSSSTLPAATNTHGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLIN
Sbjct: 121 SAGVASSSSTLPAATNTHGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLIN 180

Query: 181 LFPGNIATDVAVPQKPVKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDA 240
           LFPGNIATDVAVPQKPVKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDA
Sbjct: 181 LFPGNIATDVAVPQKPVKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDA 240

Query: 241 FQILKPELEVDPESNPHFDERMGINKTKLLRPKRMNFQFVEEGKWSKEAETIKLRSKFGE 300
           FQILKPELEVDPESNPHFDERMGINKTKLLRPKRMNFQFVEEGKWSKEAETIKLRSKFGE
Sbjct: 241 FQILKPELEVDPESNPHFDERMGINKTKLLRPKRMNFQFVEEGKWSKEAETIKLRSKFGE 300

Query: 301 AQAKERREKQAQLAKAKAAPDINPNLIEVSERVIVKEKTKEPIPEIEWWDVSLLHSGTYD 360
           AQAKERREKQAQLAKAKAAPDINPNLIEVSERVIVKEKTKEPIPEIEWWDVSLLHSGTYD
Sbjct: 301 AQAKERREKQAQLAKAKAAPDINPNLIEVSERVIVKEKTKEPIPEIEWWDVSLLHSGTYD 360

Query: 361 DVGDGFVANDKIRKDKITIYVEHPRPIEPPVEPAPPPPQPLKLTKKEQKKLRTQRRLAKE 420
           DVGDGFVANDKIRKDKITIYVEHPRPIEPPVEPAPPPPQPLKLTKKEQKKLRTQRRLAKE
Sbjct: 361 DVGDGFVANDKIRKDKITIYVEHPRPIEPPVEPAPPPPQPLKLTKKEQKKLRTQRRLAKE 420

Query: 421 KDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIA 480
           KDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIA
Sbjct: 421 KDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIA 480

Query: 481 RKLTPAERREKKERKLFDDANSLENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVIC 540
           RKLTPAERREKKERKLFDDANSLENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVIC
Sbjct: 481 RKLTPAERREKKERKLFDDANSLENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVIC 540

Query: 541 DGISVLVVEGGSKSIKRYGKLMLRRINWAASVKEEEEADESDDKPVNKCSLVWQGSVAKS 600
           DGISVLVVEGGSKSIKRYGKLMLRRINWAASVKEEEEADESDDKPVNKCSLVWQGSVAKS
Sbjct: 541 DGISVLVVEGGSKSIKRYGKLMLRRINWAASVKEEEEADESDDKPVNKCSLVWQGSVAKS 600

Query: 601 SFNKFFIQECMTEAAARKIFADAGVGHYWDLAVNFSDDQI 640
           SFNKFFIQECMTEAAARKIFADAGVGHYWDLAVNFSDDQI
Sbjct: 601 SFNKFFIQECMTEAAARKIFADAGVGHYWDLAVNFSDDQI 640

[Close]

BLAST of MC09g_new0387 vs. ExPASy TrEMBL
Match: A0A6J1CEQ9 (protein RDM16 isoform X4 OS=Momordica charantia OX=3673 GN=LOC111010059 PE=4 SV=1)

HSP 1 Score: 1212 bits (3135), Expect = 0.0
Identity = 630/630 (100.00%), Postives = 630/630 (100.00%), Query Frame = 0


Query: 11  MDPRWNLLICHQQVCPRVWYTLVIPFLSSTDGPSSTAGKSGNLSLDALAKAKKALQMQKE 70
           MDPRWNLLICHQQVCPRVWYTLVIPFLSSTDGPSSTAGKSGNLSLDALAKAKKALQMQKE
Sbjct: 1   MDPRWNLLICHQQVCPRVWYTLVIPFLSSTDGPSSTAGKSGNLSLDALAKAKKALQMQKE 60

Query: 71  LAEKLKKIPLMKKDGGSSSASSSVVKLEDKSKPAGGVLGPSPTTNIGTTISAGVASSSST 130
           LAEKLKKIPLMKKDGGSSSASSSVVKLEDKSKPAGGVLGPSPTTNIGTTISAGVASSSST
Sbjct: 61  LAEKLKKIPLMKKDGGSSSASSSVVKLEDKSKPAGGVLGPSPTTNIGTTISAGVASSSST 120

Query: 131 LPAATNTHGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNIATDV 190
           LPAATNTHGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNIATDV
Sbjct: 121 LPAATNTHGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNIATDV 180

Query: 191 AVPQKPVKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKPELEV 250
           AVPQKPVKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKPELEV
Sbjct: 181 AVPQKPVKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKPELEV 240

Query: 251 DPESNPHFDERMGINKTKLLRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKERREKQ 310
           DPESNPHFDERMGINKTKLLRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKERREKQ
Sbjct: 241 DPESNPHFDERMGINKTKLLRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKERREKQ 300

Query: 311 AQLAKAKAAPDINPNLIEVSERVIVKEKTKEPIPEIEWWDVSLLHSGTYDDVGDGFVAND 370
           AQLAKAKAAPDINPNLIEVSERVIVKEKTKEPIPEIEWWDVSLLHSGTYDDVGDGFVAND
Sbjct: 301 AQLAKAKAAPDINPNLIEVSERVIVKEKTKEPIPEIEWWDVSLLHSGTYDDVGDGFVAND 360

Query: 371 KIRKDKITIYVEHPRPIEPPVEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQG 430
           KIRKDKITIYVEHPRPIEPPVEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQG
Sbjct: 361 KIRKDKITIYVEHPRPIEPPVEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQG 420

Query: 431 LIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERRE 490
           LIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERRE
Sbjct: 421 LIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERRE 480

Query: 491 KKERKLFDDANSLENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEG 550
           KKERKLFDDANSLENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEG
Sbjct: 481 KKERKLFDDANSLENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEG 540

Query: 551 GSKSIKRYGKLMLRRINWAASVKEEEEADESDDKPVNKCSLVWQGSVAKSSFNKFFIQEC 610
           GSKSIKRYGKLMLRRINWAASVKEEEEADESDDKPVNKCSLVWQGSVAKSSFNKFFIQEC
Sbjct: 541 GSKSIKRYGKLMLRRINWAASVKEEEEADESDDKPVNKCSLVWQGSVAKSSFNKFFIQEC 600

Query: 611 MTEAAARKIFADAGVGHYWDLAVNFSDDQI 640
           MTEAAARKIFADAGVGHYWDLAVNFSDDQI
Sbjct: 601 MTEAAARKIFADAGVGHYWDLAVNFSDDQI 630

[Close]

BLAST of MC09g_new0387 vs. ExPASy TrEMBL
Match: A0A6J1CB57 (protein RDM16 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111010059 PE=4 SV=1)

HSP 1 Score: 1149 bits (2972), Expect = 0.0
Identity = 603/603 (100.00%), Postives = 603/603 (100.00%), Query Frame = 0


Query: 38  SSTDGPSSTAGKSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKKDGGSSSASSSVVKL 97
           SSTDGPSSTAGKSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKKDGGSSSASSSVVKL
Sbjct: 331 SSTDGPSSTAGKSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKKDGGSSSASSSVVKL 390

Query: 98  EDKSKPAGGVLGPSPTTNIGTTISAGVASSSSTLPAATNTHGGGINVPAGLTSIPHFEAV 157
           EDKSKPAGGVLGPSPTTNIGTTISAGVASSSSTLPAATNTHGGGINVPAGLTSIPHFEAV
Sbjct: 391 EDKSKPAGGVLGPSPTTNIGTTISAGVASSSSTLPAATNTHGGGINVPAGLTSIPHFEAV 450

Query: 158 KRAQELAARMGFRQDPEFAPLINLFPGNIATDVAVPQKPVKAPVLRLDALGREIDEQGNV 217
           KRAQELAARMGFRQDPEFAPLINLFPGNIATDVAVPQKPVKAPVLRLDALGREIDEQGNV
Sbjct: 451 KRAQELAARMGFRQDPEFAPLINLFPGNIATDVAVPQKPVKAPVLRLDALGREIDEQGNV 510

Query: 218 VNITKPSNLSTLKVNINKQKKDAFQILKPELEVDPESNPHFDERMGINKTKLLRPKRMNF 277
           VNITKPSNLSTLKVNINKQKKDAFQILKPELEVDPESNPHFDERMGINKTKLLRPKRMNF
Sbjct: 511 VNITKPSNLSTLKVNINKQKKDAFQILKPELEVDPESNPHFDERMGINKTKLLRPKRMNF 570

Query: 278 QFVEEGKWSKEAETIKLRSKFGEAQAKERREKQAQLAKAKAAPDINPNLIEVSERVIVKE 337
           QFVEEGKWSKEAETIKLRSKFGEAQAKERREKQAQLAKAKAAPDINPNLIEVSERVIVKE
Sbjct: 571 QFVEEGKWSKEAETIKLRSKFGEAQAKERREKQAQLAKAKAAPDINPNLIEVSERVIVKE 630

Query: 338 KTKEPIPEIEWWDVSLLHSGTYDDVGDGFVANDKIRKDKITIYVEHPRPIEPPVEPAPPP 397
           KTKEPIPEIEWWDVSLLHSGTYDDVGDGFVANDKIRKDKITIYVEHPRPIEPPVEPAPPP
Sbjct: 631 KTKEPIPEIEWWDVSLLHSGTYDDVGDGFVANDKIRKDKITIYVEHPRPIEPPVEPAPPP 690

Query: 398 PQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPT 457
           PQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPT
Sbjct: 691 PQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPT 750

Query: 458 KLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFDDANSLENFVSVYKIYDLSH 517
           KLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFDDANSLENFVSVYKIYDLSH
Sbjct: 751 KLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFDDANSLENFVSVYKIYDLSH 810

Query: 518 PQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIKRYGKLMLRRINWAASVKEEEE 577
           PQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIKRYGKLMLRRINWAASVKEEEE
Sbjct: 811 PQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIKRYGKLMLRRINWAASVKEEEE 870

Query: 578 ADESDDKPVNKCSLVWQGSVAKSSFNKFFIQECMTEAAARKIFADAGVGHYWDLAVNFSD 637
           ADESDDKPVNKCSLVWQGSVAKSSFNKFFIQECMTEAAARKIFADAGVGHYWDLAVNFSD
Sbjct: 871 ADESDDKPVNKCSLVWQGSVAKSSFNKFFIQECMTEAAARKIFADAGVGHYWDLAVNFSD 930

Query: 638 DQI 640
           DQI
Sbjct: 931 DQI 933

[Close]

BLAST of MC09g_new0387 vs. ExPASy TrEMBL
Match: A0A6J1CBF9 (protein RDM16 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111010059 PE=4 SV=1)

HSP 1 Score: 1149 bits (2972), Expect = 0.0
Identity = 603/603 (100.00%), Postives = 603/603 (100.00%), Query Frame = 0


Query: 38  SSTDGPSSTAGKSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKKDGGSSSASSSVVKL 97
           SSTDGPSSTAGKSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKKDGGSSSASSSVVKL
Sbjct: 325 SSTDGPSSTAGKSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKKDGGSSSASSSVVKL 384

Query: 98  EDKSKPAGGVLGPSPTTNIGTTISAGVASSSSTLPAATNTHGGGINVPAGLTSIPHFEAV 157
           EDKSKPAGGVLGPSPTTNIGTTISAGVASSSSTLPAATNTHGGGINVPAGLTSIPHFEAV
Sbjct: 385 EDKSKPAGGVLGPSPTTNIGTTISAGVASSSSTLPAATNTHGGGINVPAGLTSIPHFEAV 444

Query: 158 KRAQELAARMGFRQDPEFAPLINLFPGNIATDVAVPQKPVKAPVLRLDALGREIDEQGNV 217
           KRAQELAARMGFRQDPEFAPLINLFPGNIATDVAVPQKPVKAPVLRLDALGREIDEQGNV
Sbjct: 445 KRAQELAARMGFRQDPEFAPLINLFPGNIATDVAVPQKPVKAPVLRLDALGREIDEQGNV 504

Query: 218 VNITKPSNLSTLKVNINKQKKDAFQILKPELEVDPESNPHFDERMGINKTKLLRPKRMNF 277
           VNITKPSNLSTLKVNINKQKKDAFQILKPELEVDPESNPHFDERMGINKTKLLRPKRMNF
Sbjct: 505 VNITKPSNLSTLKVNINKQKKDAFQILKPELEVDPESNPHFDERMGINKTKLLRPKRMNF 564

Query: 278 QFVEEGKWSKEAETIKLRSKFGEAQAKERREKQAQLAKAKAAPDINPNLIEVSERVIVKE 337
           QFVEEGKWSKEAETIKLRSKFGEAQAKERREKQAQLAKAKAAPDINPNLIEVSERVIVKE
Sbjct: 565 QFVEEGKWSKEAETIKLRSKFGEAQAKERREKQAQLAKAKAAPDINPNLIEVSERVIVKE 624

Query: 338 KTKEPIPEIEWWDVSLLHSGTYDDVGDGFVANDKIRKDKITIYVEHPRPIEPPVEPAPPP 397
           KTKEPIPEIEWWDVSLLHSGTYDDVGDGFVANDKIRKDKITIYVEHPRPIEPPVEPAPPP
Sbjct: 625 KTKEPIPEIEWWDVSLLHSGTYDDVGDGFVANDKIRKDKITIYVEHPRPIEPPVEPAPPP 684

Query: 398 PQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPT 457
           PQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPT
Sbjct: 685 PQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPT 744

Query: 458 KLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFDDANSLENFVSVYKIYDLSH 517
           KLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFDDANSLENFVSVYKIYDLSH
Sbjct: 745 KLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFDDANSLENFVSVYKIYDLSH 804

Query: 518 PQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIKRYGKLMLRRINWAASVKEEEE 577
           PQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIKRYGKLMLRRINWAASVKEEEE
Sbjct: 805 PQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIKRYGKLMLRRINWAASVKEEEE 864

Query: 578 ADESDDKPVNKCSLVWQGSVAKSSFNKFFIQECMTEAAARKIFADAGVGHYWDLAVNFSD 637
           ADESDDKPVNKCSLVWQGSVAKSSFNKFFIQECMTEAAARKIFADAGVGHYWDLAVNFSD
Sbjct: 865 ADESDDKPVNKCSLVWQGSVAKSSFNKFFIQECMTEAAARKIFADAGVGHYWDLAVNFSD 924

Query: 638 DQI 640
           DQI
Sbjct: 925 DQI 927

[Close]

BLAST of MC09g_new0387 vs. ExPASy TrEMBL
Match: A0A6J1CBS3 (protein RDM16 isoform X5 OS=Momordica charantia OX=3673 GN=LOC111010059 PE=4 SV=1)

HSP 1 Score: 1097 bits (2838), Expect = 0.0
Identity = 574/574 (100.00%), Postives = 574/574 (100.00%), Query Frame = 0


Query: 67  MQKELAEKLKKIPLMKKDGGSSSASSSVVKLEDKSKPAGGVLGPSPTTNIGTTISAGVAS 126
           MQKELAEKLKKIPLMKKDGGSSSASSSVVKLEDKSKPAGGVLGPSPTTNIGTTISAGVAS
Sbjct: 1   MQKELAEKLKKIPLMKKDGGSSSASSSVVKLEDKSKPAGGVLGPSPTTNIGTTISAGVAS 60

Query: 127 SSSTLPAATNTHGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNI 186
           SSSTLPAATNTHGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNI
Sbjct: 61  SSSTLPAATNTHGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNI 120

Query: 187 ATDVAVPQKPVKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP 246
           ATDVAVPQKPVKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP
Sbjct: 121 ATDVAVPQKPVKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP 180

Query: 247 ELEVDPESNPHFDERMGINKTKLLRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKER 306
           ELEVDPESNPHFDERMGINKTKLLRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKER
Sbjct: 181 ELEVDPESNPHFDERMGINKTKLLRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKER 240

Query: 307 REKQAQLAKAKAAPDINPNLIEVSERVIVKEKTKEPIPEIEWWDVSLLHSGTYDDVGDGF 366
           REKQAQLAKAKAAPDINPNLIEVSERVIVKEKTKEPIPEIEWWDVSLLHSGTYDDVGDGF
Sbjct: 241 REKQAQLAKAKAAPDINPNLIEVSERVIVKEKTKEPIPEIEWWDVSLLHSGTYDDVGDGF 300

Query: 367 VANDKIRKDKITIYVEHPRPIEPPVEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEM 426
           VANDKIRKDKITIYVEHPRPIEPPVEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEM
Sbjct: 301 VANDKIRKDKITIYVEHPRPIEPPVEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEM 360

Query: 427 IRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPA 486
           IRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPA
Sbjct: 361 IRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPA 420

Query: 487 ERREKKERKLFDDANSLENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVICDGISVL 546
           ERREKKERKLFDDANSLENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVICDGISVL
Sbjct: 421 ERREKKERKLFDDANSLENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVICDGISVL 480

Query: 547 VVEGGSKSIKRYGKLMLRRINWAASVKEEEEADESDDKPVNKCSLVWQGSVAKSSFNKFF 606
           VVEGGSKSIKRYGKLMLRRINWAASVKEEEEADESDDKPVNKCSLVWQGSVAKSSFNKFF
Sbjct: 481 VVEGGSKSIKRYGKLMLRRINWAASVKEEEEADESDDKPVNKCSLVWQGSVAKSSFNKFF 540

Query: 607 IQECMTEAAARKIFADAGVGHYWDLAVNFSDDQI 640
           IQECMTEAAARKIFADAGVGHYWDLAVNFSDDQI
Sbjct: 541 IQECMTEAAARKIFADAGVGHYWDLAVNFSDDQI 574

[Close]

BLAST of MC09g_new0387 vs. TAIR 10
Match: AT1G28060.1 (Pre-mRNA-splicing factor 3 )

HSP 1 Score: 723.0 bits (1865), Expect = 2.1e-208
Identity = 399/611 (65.30%), Postives = 476/611 (77.91%), Query Frame = 0


Query: 34  IPFLSSTDG-PSSTAGK-SGNLSLDA---LAKAKKALQMQKELAEKLKKIPLMKKDGGSS 93
           +P  SSTDG P STAGK S NL LD+    AKA+KALQ+QK LA++LK +PL+KK    +
Sbjct: 202 VPGKSSTDGRPLSTAGKSSANLPLDSSALAAKARKALQLQKGLADRLKNLPLLKKATKPT 261

Query: 94  SASSSVVKLEDKSKPAGGVLGPSPTTNIGTTISAGVASSSSTLPAATNTHGGGINVPAGL 153
           S  S   ++            PS TT     +S G  S +STLP     H G     AG 
Sbjct: 262 SEGSPHTRVP-----------PSTTT---PAVSTG-TSFASTLP-----HTG----LAGF 321

Query: 154 TSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNIATDVAVPQKPVKAPVLRLDALG 213
            SI + EAVKRAQELAA MGF QD EFAP+INLFPG   +D+ V Q+P K PVLR+DALG
Sbjct: 322 GSIANIEAVKRAQELAANMGFHQDREFAPVINLFPGQAPSDMTVAQRPEKPPVLRVDALG 381

Query: 214 REIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKPELEVDPESNPHFDERMGINKTK 273
           REIDE GNV+++TKPSNLSTLKVNINK+KKDAFQILKP+LE D + NP+FD RMGI++ K
Sbjct: 382 REIDEHGNVISVTKPSNLSTLKVNINKKKKDAFQILKPQLEADLKENPYFDTRMGIDEKK 441

Query: 274 LLRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKERREKQAQLAKAKAAPDINPNLIE 333
           +LRPKRM+FQFVEEGKW+++AE +K +S FGEA+AKE + KQAQLAKA    DINPNLIE
Sbjct: 442 ILRPKRMSFQFVEEGKWTRDAENLKFKSHFGEAKAKELKVKQAQLAKAN--DDINPNLIE 501

Query: 334 VSERVIVKEKTKEPIPEIEWWDVSLLHSGTYDDVGDGFVANDKIRKDKITIYVEHPRPIE 393
           VSERV  KEK KEPIP++EWWD ++L +G Y ++ DG +    ++ +K+T Y+EHPRPIE
Sbjct: 502 VSERVPRKEKPKEPIPDVEWWDANVLTNGEYGEITDGTITESHLKIEKLTHYIEHPRPIE 561

Query: 394 PPVEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVL 453
           PP E APPPPQPLKLTKKEQKKLRTQRRLAKEK++QEMIRQGL+EPPK KVKMSNLMKVL
Sbjct: 562 PPAEAAPPPPQPLKLTKKEQKKLRTQRRLAKEKEKQEMIRQGLLEPPKAKVKMSNLMKVL 621

Query: 454 GSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFDDANSLENFVS 513
           GSEATQDPTKLEKEIR AAAEREQAH DRN ARKLTPAE+REKKERKLFDD  ++E  VS
Sbjct: 622 GSEATQDPTKLEKEIRTAAAEREQAHTDRNAARKLTPAEKREKKERKLFDDPTTVETIVS 681

Query: 514 VYKIYDLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIKRYGKLMLRRINW 573
           VYKI  LSHP+ RFKV++NARENRLTGC+V+ D +SV+VVEG SK+IKRYGKLM++RINW
Sbjct: 682 VYKIKKLSHPKTRFKVEMNARENRLTGCSVMTDEMSVVVVEGKSKAIKRYGKLMMKRINW 741

Query: 574 -AASVKEEEEADESDDKPVNKCSLVWQGSVAKSSFNKFFIQECMTEAAARKIFADAGVGH 633
             A  KE  E +E +    NKC LVWQGS+ K SF++F + EC+TE+ A+K+F DAGV H
Sbjct: 742 EEAERKEGNEDEEEEVNGGNKCWLVWQGSIGKPSFHRFHVHECVTESTAKKVFMDAGVVH 786

Query: 634 YWDLAVNFSDD 639
           YWDLAVN+SDD
Sbjct: 802 YWDLAVNYSDD 786

[Close]

BLAST of MC09g_new0387 vs. TAIR 10
Match: AT3G55930.1 (Pre-mRNA-splicing factor 3 )

HSP 1 Score: 332.8 bits (852), Expect = 6.1e-91
Identity = 206/450 (45.78%), Postives = 264/450 (58.67%), Query Frame = 0


Query: 195 KPVKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKPELEVDPES 254
           K  K  VLR+DALGREIDE GNV+++TKP N STL VNI                   ++
Sbjct: 91  KQTKGFVLRVDALGREIDEHGNVISVTKPINHSTLMVNIR------------------DN 150

Query: 255 NPHFDERMGINKTKLLRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKERREKQAQLA 314
            PH                                                      +L+
Sbjct: 151 VPH-----------------------------------------------------RKLS 210

Query: 315 KAKAAPDINPNLIEVSERVIVKEKTKEPIPEIEWWDVSLLHSGTYDDVG--DGFVANDKI 374
           K  +                            EWWD  +L   T +++      +  D I
Sbjct: 211 KILS----------------------------EWWDAKILTDDTINELSCDPNILIMDTI 270

Query: 375 RKDKITI-----YVEHPRPIEPPVEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMI 434
            ++ + +     ++EHP PIEPP E A PPPQPLK+TK+E+KKLRT RR+AKE +++EMI
Sbjct: 271 TENHLNMKVFNCHIEHPFPIEPPAEAASPPPQPLKMTKEERKKLRTLRRVAKEMEKREMI 330

Query: 435 RQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAE 494
            QG +EP K KVKMSNLMKV  SEATQ+PTKLEKEIR  AAEREQAH+DRN+ARKLTPAE
Sbjct: 331 SQGRVEPQKSKVKMSNLMKVRASEATQNPTKLEKEIRTEAAEREQAHMDRNVARKLTPAE 390

Query: 495 RREKKERKLFDDANS-LENFVSVYKI-YDLSHPQARFKVDVNARENRLTGCAVICDGISV 554
           +REKKERKLF D  + +E  VSVYKI   LS P+ RFKV +NA++N LTG +V+ DG+SV
Sbjct: 391 KREKKERKLFGDPTTVVETIVSVYKINKKLSDPKTRFKVRMNAKQNILTGFSVMMDGMSV 437

Query: 555 LVVEGGSKSIKRYGKLMLRRINWAASVKEEEEADESDDKPVNKCSLVWQGSVAKSSFNKF 614
           +VVEG  K+I RY KLML+RINW  + K+E+E +       NKC LVWQGSV K SF++F
Sbjct: 451 VVVEGKRKAINRYEKLMLKRINWEEAEKKEDEEENGG----NKCCLVWQGSVEKPSFHRF 437

Query: 615 FIQECMTEAAARKIFADAGVGHYWDLAVNF 636
            +QEC+T++ A+K+F DAGV HYWDLA+N+
Sbjct: 511 HVQECLTKSDAKKVFNDAGVAHYWDLALNY 437

[Close]

BLAST of MC09g_new0387 vs. TAIR 10
Match: AT3G56790.1 (RNA splicing factor-related )

HSP 1 Score: 79.0 bits (193), Expect = 1.6e-14
Identity = 45/60 (75.00%), Postives = 52/60 (86.67%), Query Frame = 0


Query: 397 PPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSE-ATQD 456
           PPQP KLTKKE+KKL+T RR+AKEK++Q+MIRQ L EP K KVK+SNLMKVL SE ATQD
Sbjct: 144 PPQPFKLTKKEEKKLQTLRRVAKEKEKQKMIRQALFEPQKSKVKLSNLMKVLASELATQD 203

HSP 2 Score: 61.6 bits (148), Expect = 2.6e-09
Identity = 46/105 (43.81%), Postives = 52/105 (49.52%), Query Frame = 0


Query: 143 NVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNIATDVAVPQKPVKAPVL 202
           ++ +  TS    EAVKR QEL                       A D AV  K  K   L
Sbjct: 69  SIASDTTSSQILEAVKRFQEL-----------------------AIDTAVAHKQTKGFFL 128

Query: 203 RLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQ-ILKP 247
           R+D LGREIDE G+V+      NLSTL VN NK KKD FQ ILKP
Sbjct: 129 RVDVLGREIDEYGHVI------NLSTLMVNNNKHKKDVFQNILKP 144

The following BLAST results are available for this feature:

BLAST of MC09g_new0387 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C7E7	2.9e-207	65.30	Protein RDM16 OS=Arabidopsis thaliana OX=3702 GN=RDM16 PE=2 SV=1	[more]
O43395	8.1e-72	37.75	U4/U6 small nuclear ribonucleoprotein Prp3 OS=Homo sapiens OX=9606 GN=PRPF3 PE=1...	[more]
Q5R5F1	8.1e-72	37.75	U4/U6 small nuclear ribonucleoprotein Prp3 OS=Pongo abelii OX=9601 GN=PRPF3 PE=2...	[more]
Q922U1	1.1e-71	37.95	U4/U6 small nuclear ribonucleoprotein Prp3 OS=Mus musculus OX=10090 GN=Prpf3 PE=...	[more]
Q2KIA6	1.4e-71	38.10	U4/U6 small nuclear ribonucleoprotein Prp3 OS=Bos taurus OX=9913 GN=PRPF3 PE=2 S...	[more]

BLAST of MC09g_new0387 vs. NCBI nr


Match Name	Identity	Description
XP_022139032.1	100.00	protein RDM16 isoform X3 [Momordica charantia]	[more]
XP_022139033.1	100.00	protein RDM16 isoform X4 [Momordica charantia]	[more]
XP_022139031.1	100.00	protein RDM16 isoform X2 [Momordica charantia]	[more]
XP_022139030.1	100.00	protein RDM16 isoform X1 [Momordica charantia]	[more]
XP_022139034.1	100.00	protein RDM16 isoform X5 [Momordica charantia]	[more]

BLAST of MC09g_new0387 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A6J1CCW0	100.00	protein RDM16 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111010059 PE=4 SV=...	[more]
A0A6J1CEQ9	100.00	protein RDM16 isoform X4 OS=Momordica charantia OX=3673 GN=LOC111010059 PE=4 SV=...	[more]
A0A6J1CB57	100.00	protein RDM16 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111010059 PE=4 SV=...	[more]
A0A6J1CBF9	100.00	protein RDM16 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111010059 PE=4 SV=...	[more]
A0A6J1CBS3	100.00	protein RDM16 isoform X5 OS=Momordica charantia OX=3673 GN=LOC111010059 PE=4 SV=...	[more]

BLAST of MC09g_new0387 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G28060.1	2.1e-208	65.30	Pre-mRNA-splicing factor 3	[more]
AT3G55930.1	6.1e-91	45.78	Pre-mRNA-splicing factor 3	[more]
AT3G56790.1	1.6e-14	75.00	RNA splicing factor-related	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 55..78
None	No IPR available	COILS	Coil	Coil	coord: 401..423
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 82..113
None	No IPR available	PANTHER	PTHR14212:SF2	SUBFAMILY NOT NAMED	coord: 38..639
IPR010541	Domain of unknown function DUF1115	PFAM	PF06544	DUF1115	coord: 509..632 e-value: 8.2E-41 score: 139.5
IPR013881	Pre-mRNA-splicing factor 3	PFAM	PF08572	PRP3	coord: 255..484 e-value: 1.4E-62 score: 211.3
IPR027104	U4/U6 small nuclear ribonucleoprotein Prp3	PANTHER	PTHR14212	U4/U6-ASSOCIATED RNA SPLICING FACTOR-RELATED	coord: 38..639

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC09g_new0387.1	MC09g_new0387.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000398	mRNA splicing, via spliceosome
cellular_component	GO:0046540	U4/U6 x U5 tri-snRNP complex