MC09g_new0100 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC09g_new0100
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC09: 4044773 .. 4045027 (-)
RNA-Seq ExpressionMC09g_new0100
SyntenyMC09g_new0100
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAATGGGCGATAAGGCGCTCCTCTTGGGGGGAGAAGGCGCCACGTTTGAGGTCGGGGCGGAGGTAGTTAATCCAGCGGAGGCGGCAGCTCTTACCGCAGCGGAGGAGGCCGGCATTTCGGGCGATGTCGGTCCAGCAGCCTTGGCCATTGGTAAGCATGTATGTCATGAGCTTCTCGTCTTCCTCCGGCGACCAGAGGCCCTTTCTCAGGCGGCTGTTGGCGGATTCCGGCTTCCTCATTTTGTTCTTTAG

mRNA sequence

ATGGAAATGGGCGATAAGGCGCTCCTCTTGGGGGGAGAAGGCGCCACGTTTGAGGTCGGGGCGGAGGTAGTTAATCCAGCGGAGGCGGCAGCTCTTACCGCAGCGGAGGAGGCCGGCATTTCGGGCGATGTCGGTCCAGCAGCCTTGGCCATTGGTAAGCATGTATGTCATGAGCTTCTCGTCTTCCTCCGGCGACCAGAGGCCCTTTCTCAGGCGGCTGTTGGCGGATTCCGGCTTCCTCATTTTGTTCTTTAG

Coding sequence (CDS)

ATGGAAATGGGCGATAAGGCGCTCCTCTTGGGGGGAGAAGGCGCCACGTTTGAGGTCGGGGCGGAGGTAGTTAATCCAGCGGAGGCGGCAGCTCTTACCGCAGCGGAGGAGGCCGGCATTTCGGGCGATGTCGGTCCAGCAGCCTTGGCCATTGGTAAGCATGTATGTCATGAGCTTCTCGTCTTCCTCCGGCGACCAGAGGCCCTTTCTCAGGCGGCTGTTGGCGGATTCCGGCTTCCTCATTTTGTTCTTTAG

Protein sequence

MEMGDKALLLGGEGATFEVGAEVVNPAEAAALTAAEEAGISGDVGPAALAIGKHVCHELLVFLRRPEALSQAAVGGFRLPHFVL
Homology
BLAST of MC09g_new0100 vs. NCBI nr
Match: RWW07624.1 (hypothetical protein GW17_00028985 [Ensete ventricosum])

HSP 1 Score: 68.9 bits (167), Expect = 2.71e-11
Identity = 34/75 (45.33%), Postives = 49/75 (65.33%), Query Frame = 0

Query: 1  MEMGDKALLLGGEGATFEVGAEVVNPAEAAALTAAEEAGISGDVGPAALAIGKHVCHELL 60
          M++ DK L L GE A  E G++V++P + AAL+   +A I GD+ PA L++ +HV HELL
Sbjct: 15 MQVDDKLLFLKGERAALETGSQVIDPTKTAALSTPLQARIPGDLAPATLSVSEHVVHELL 74

Query: 61 VFLRRPEALSQAAVG 75
          + LRRP+   Q A  
Sbjct: 75 ILLRRPQPFPQPAAS 89

BLAST of MC09g_new0100 vs. NCBI nr
Match: RZS26638.1 (hypothetical protein BHM03_00060017 [Ensete ventricosum])

HSP 1 Score: 56.2 bits (134), Expect = 1.30e-07
Identity = 34/82 (41.46%), Postives = 51/82 (62.20%), Query Frame = 0

Query: 1   MEMGDKALLLGGEGATFEVGAEVVNPAEAAALTAAEEAGISGDVGPAALAIGKHVCHELL 60
           +E+ D+ +L  GE AT E GA+VV+PA+AAALTA  +AG  G+  PA  ++G  V ++ +
Sbjct: 51  VEINDELVLYLGEVATLEAGAQVVDPAQAAALTAPVKAGRLGERAPAPFSVGADVSYKAV 110

Query: 61  VFLRRP-EALSQAAVGGFRLPH 81
           VFL  P   +    +  +R PH
Sbjct: 111 VFLLGPCSFVDVGLLAAWRPPH 132

BLAST of MC09g_new0100 vs. NCBI nr
Match: THU44349.1 (hypothetical protein C4D60_Mb02t06470 [Musa balbisiana])

HSP 1 Score: 47.8 bits (112), Expect = 3.05e-04
Identity = 32/73 (43.84%), Postives = 44/73 (60.27%), Query Frame = 0

Query: 1   MEMGDKALLLGGEGATFEVGAEVVNPAEAAALTAAEEAGISGDVGPAALAIGKHVCHELL 60
           +E+ ++ LL  GE A+ ++ +EV+ P E A L AA +AG  GD  PA   +  HV +EL 
Sbjct: 53  VEVDNELLLFLGELASLDIRSEVIGPPEPATLPAAVQAGQLGDAMPAPPPMLLHVINELP 112

Query: 61  VFLRRPEALSQAA 73
           V LR P  L QAA
Sbjct: 113 VLLRCPWPLLQAA 125

BLAST of MC09g_new0100 vs. ExPASy TrEMBL
Match: A0A444EBC3 (Uncharacterized protein OS=Ensete ventricosum OX=4639 GN=GW17_00028985 PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 1.31e-11
Identity = 34/75 (45.33%), Postives = 49/75 (65.33%), Query Frame = 0

Query: 1  MEMGDKALLLGGEGATFEVGAEVVNPAEAAALTAAEEAGISGDVGPAALAIGKHVCHELL 60
          M++ DK L L GE A  E G++V++P + AAL+   +A I GD+ PA L++ +HV HELL
Sbjct: 15 MQVDDKLLFLKGERAALETGSQVIDPTKTAALSTPLQARIPGDLAPATLSVSEHVVHELL 74

Query: 61 VFLRRPEALSQAAVG 75
          + LRRP+   Q A  
Sbjct: 75 ILLRRPQPFPQPAAS 89

BLAST of MC09g_new0100 vs. ExPASy TrEMBL
Match: A0A0A9F624 (Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 1.39e-05
Identity = 36/84 (42.86%), Postives = 48/84 (57.14%), Query Frame = 0

Query: 1  MEMGDKALLLGGEGATFEVGAEVVNPAEAAALTAAEEAGISGDVGPAALAIGKHVCHELL 60
          M+  D  LLL  E A  +VGA+VV+P + AAL A  E    G   PA  ++   V  ELL
Sbjct: 1  MQADDGVLLLLREAAPLQVGAQVVDPPQPAALAAPLEPCELGHGAPAPDSVTDDVIVELL 60

Query: 61 VFLRRPEALSQ----AAVGGFRLP 80
          VFLRRP+ L++    +A GG  +P
Sbjct: 61 VFLRRPKPLAELLLNSAAGGGGVP 84

BLAST of MC09g_new0100 vs. ExPASy TrEMBL
Match: A0A0A9GGI7 (Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 2.01e-05
Identity = 36/80 (45.00%), Postives = 45/80 (56.25%), Query Frame = 0

Query: 1  MEMGDKALLLGGEGATFEVGAEVVNPAEAAALTAAEEAGISGDVGPAALAIGKHVCHELL 60
          M+  D+ LLL  E A  +VGAEVV+P + AAL A  +    G   PA   +   V  ELL
Sbjct: 1  MQADDRVLLLLREAAPLQVGAEVVDPPQPAALAAPLQPCELGHGAPAPDTVTDDVIVELL 60

Query: 61 VFLRRPEALSQ----AAVGG 76
          VFL RPE L+Q    +A GG
Sbjct: 61 VFLGRPEPLAQLLLDSAAGG 80

BLAST of MC09g_new0100 vs. ExPASy TrEMBL
Match: A0A4S8I9K9 (Uncharacterized protein OS=Musa balbisiana OX=52838 GN=C4D60_Mb02t06470 PE=4 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 1.48e-04
Identity = 32/73 (43.84%), Postives = 44/73 (60.27%), Query Frame = 0

Query: 1   MEMGDKALLLGGEGATFEVGAEVVNPAEAAALTAAEEAGISGDVGPAALAIGKHVCHELL 60
           +E+ ++ LL  GE A+ ++ +EV+ P E A L AA +AG  GD  PA   +  HV +EL 
Sbjct: 53  VEVDNELLLFLGELASLDIRSEVIGPPEPATLPAAVQAGQLGDAMPAPPPMLLHVINELP 112

Query: 61  VFLRRPEALSQAA 73
           V LR P  L QAA
Sbjct: 113 VLLRCPWPLLQAA 125

BLAST of MC09g_new0100 vs. ExPASy TrEMBL
Match: A0A0A9HTC1 (Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1)

HSP 1 Score: 45.1 bits (105), Expect = 8.67e-04
Identity = 33/82 (40.24%), Postives = 41/82 (50.00%), Query Frame = 0

Query: 1  MEMGDKALLLGGEGATFEVGAEVVNPAEAAALTAAEEAGISGDVGPAALAIGKHVCHELL 60
          ME+ D  L L G+     VG EVV+P + AAL A ++  I G   P  LA+   V  E L
Sbjct: 1  MELDDDVLFLFGDVPPLHVGPEVVDPPQPAALAAPQQPCILGQRPPGPLAVLGSVVGEYL 60

Query: 61 VFLRRPEA-LSQAAVGGFRLPH 81
          V LRRP   L    +   R PH
Sbjct: 61 VLLRRPPPPLQPHLLAARRPPH 82

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
RWW07624.12.71e-1145.33hypothetical protein GW17_00028985 [Ensete ventricosum][more]
RZS26638.11.30e-0741.46hypothetical protein BHM03_00060017 [Ensete ventricosum][more]
THU44349.13.05e-0443.84hypothetical protein C4D60_Mb02t06470 [Musa balbisiana][more]
Match NameE-valueIdentityDescription
A0A444EBC31.31e-1145.33Uncharacterized protein OS=Ensete ventricosum OX=4639 GN=GW17_00028985 PE=4 SV=1[more]
A0A0A9F6241.39e-0542.86Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1[more]
A0A0A9GGI72.01e-0545.00Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1[more]
A0A4S8I9K91.48e-0443.84Uncharacterized protein OS=Musa balbisiana OX=52838 GN=C4D60_Mb02t06470 PE=4 SV=... [more]
A0A0A9HTC18.67e-0440.24Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC09g_new0100.1MC09g_new0100.1mRNA